Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:07:54 (3251116): wrapper (7.7.26015): starting
18:07:54 (3251116): wrapper: running run_atlas (--nthreads 10)
[2026-01-10 18:07:54] Arguments: --nthreads 10
[2026-01-10 18:07:54] Threads: 10
[2026-01-10 18:07:54] Checking for CVMFS
[2026-01-10 18:07:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:07:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:07:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:07:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:07:55] 2.13.3.0 11226 93792 342492 154994 2 91 23104418 32935936 9730 16776704 0 217283368 99.407 354040767 38886 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 18:07:55] CVMFS is ok
[2026-01-10 18:07:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:07:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:07:55] Further information can be found at the LHC@home message board.
[2026-01-10 18:07:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:07:55] Checking for apptainer binary...
[2026-01-10 18:07:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:07:55] Running /usr/bin/apptainer --version
[2026-01-10 18:07:55] apptainer version 1.4.5-2.el9
[2026-01-10 18:07:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:07:55] c6-2-29-3.aglt2.org
[2026-01-10 18:07:55] apptainer works
[2026-01-10 18:07:55] Set ATHENA_PROC_NUMBER=10
[2026-01-10 18:07:55] Set ATHENA_CORE_NUMBER=10
[2026-01-10 18:07:55] Starting ATLAS job with PandaID=6965803268
[2026-01-10 18:07:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:48:40]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:48:40] 2026-01-11 00:47:34,363 | INFO     | time since job start (5968s) is within the limit (349056.0s)
[2026-01-10 19:48:40] 2026-01-11 00:47:35,253 | INFO     | monitor loop #375: job 0:6965803268 is in state 'finished'
[2026-01-10 19:48:40] 2026-01-11 00:47:35,253 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:48:40] 2026-01-11 00:47:36,370 | INFO     | time since job start (5970s) is within the limit (349056.0s)
[2026-01-10 19:48:40] 2026-01-11 00:47:37,793 | INFO     | monitor loop #376: job 0:6965803268 is in state 'finished'
[2026-01-10 19:48:40] 2026-01-11 00:47:37,793 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:48:40] 2026-01-11 00:47:39,095 | INFO     | PID=3256737 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:48:40] 2026-01-11 00:47:39,095 | INFO     | .. there are 9 such processes running
[2026-01-10 19:48:40] 2026-01-11 00:47:40,096 | INFO     | time since job start (5974s) is within the limit (349056.0s)
[2026-01-10 19:48:40] 2026-01-11 00:47:40,298 | INFO     | monitor loop #377: job 0:6965803268 is in state 'finished'
[2026-01-10 19:48:40] 2026-01-11 00:47:40,298 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:48:40] 2026-01-11 00:47:42,103 | INFO     | time since job start (5976s) is within the limit (349056.0s)
[2026-01-10 19:48:40] 2026-01-11 00:47:42,803 | INFO     | monitor loop #378: job 0:6965803268 is in state 'finished'
[2026-01-10 19:48:40] 2026-01-11 00:47:42,803 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:48:40] 2026-01-11 00:47:44,111 | INFO     | time since job start (5978s) is within the limit (349056.0s)
[2026-01-10 19:48:40] 2026-01-11 00:47:45,308 | INFO     | monitor loop #379: job 0:6965803268 is in state 'finished'
[2026-01-10 19:48:40] 2026-01-11 00:47:45,308 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:48:40] 2026-01-11 00:47:46,118 | INFO     | time since job start (5980s) is within the limit (349056.0s)
[2026-01-10 19:48:40] 2026-01-11 00:47:47,813 | INFO     | monitor loop #380: job 0:6965803268 is in state 'finished'
[2026-01-10 19:48:40] 2026-01-11 00:47:47,813 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:48:40] 2026-01-11 00:47:48,125 | INFO     | time since job start (5982s) is within the limit (349056.0s)
[2026-01-10 19:48:40] 2026-01-11 00:47:50,134 | INFO     | time since job start (5984s) is within the limit (349056.0s)
[2026-01-10 19:48:40] 2026-01-11 00:47:50,318 | INFO     | monitor loop #381: job 0:6965803268 is in state 'finished'
[2026-01-10 19:48:40] 2026-01-11 00:47:50,318 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:48:40] 2026-01-11 00:47:52,141 | INFO     | time since job start (5986s) is within the limit (349056.0s)
[2026-01-10 19:48:40] 2026-01-11 00:47:52,825 | INFO     | monitor loop #382: job 0:6965803268 is in state 'finished'
[2026-01-10 19:48:40] 2026-01-11 00:47:52,825 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:48:40] 2026-01-11 00:47:54,148 | INFO     | time since job start (5988s) is within the limit (349056.0s)
[2026-01-10 19:48:40] 2026-01-11 00:47:55,338 | INFO     | monitor loop #383: job 0:6965803268 is in state 'finished'
[2026-01-10 19:48:40] 2026-01-11 00:47:55,338 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:48:40] 2026-01-11 00:47:56,179 | INFO     | time since job start (5990s) is within the limit (349056.0s)
[2026-01-10 19:48:40] 2026-01-11 00:47:57,843 | INFO     | monitor loop #384: job 0:6965803268 is in state 'finished'
[2026-01-10 19:48:40] 2026-01-11 00:47:57,843 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:48:40] 2026-01-11 00:47:58,186 | INFO     | time since job start (5992s) is within the limit (349056.0s)
[2026-01-10 19:48:40] 2026-01-11 00:48:00,198 | INFO     | time since job start (5994s) is within the limit (349056.0s)
[2026-01-10 19:48:40] 2026-01-11 00:48:00,348 | INFO     | monitor loop #385: job 0:6965803268 is in state 'finished'
[2026-01-10 19:48:40] 2026-01-11 00:48:00,348 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:48:40] 2026-01-11 00:48:01,478 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 19:48:40] 2026-01-11 00:48:01,482 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2957.0896071428574
[2026-01-10 19:48:40] 2026-01-11 00:48:01,598 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965803268/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:48:40] 2026-01-11 00:48:01,599 | INFO     | extracted standard info from prmon json
[2026-01-10 19:48:40] 2026-01-11 00:48:01,599 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:48:40] 2026-01-11 00:48:01,599 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:48:40] 2026-01-11 00:48:01,654 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:48:40] 2026-01-11 00:48:01,654 | INFO     | sum of square deviations: 233501873.75824168
[2026-01-10 19:48:40] 2026-01-11 00:48:01,655 | INFO     | sum of deviations: -53587248614.05494
[2026-01-10 19:48:40] 2026-01-11 00:48:01,655 | INFO     | mean x: 1768089566.6813188
[2026-01-10 19:48:40] 2026-01-11 00:48:01,655 | INFO     | mean y: 2512070.791208791
[2026-01-10 19:48:40] 2026-01-11 00:48:01,655 | INFO     | intersect: 405768228879.4098
[2026-01-10 19:48:40] 2026-01-11 00:48:01,655 | INFO     | chi2: 6.579985278282492
[2026-01-10 19:48:40] 2026-01-11 00:48:01,655 | INFO     | current memory leak: -229.49 B/s (using 91 data points, chi2=6.58)
[2026-01-10 19:48:40] 2026-01-11 00:48:01,682 | INFO     | could have reported an average CPU frequency of 2974 MHz (7 samples)
[2026-01-10 19:48:40] 2026-01-11 00:48:01,682 | INFO     | ..............................
[2026-01-10 19:48:40] 2026-01-11 00:48:01,682 | INFO     | . Timing measurements:
[2026-01-10 19:48:40] 2026-01-11 00:48:01,682 | INFO     | . get job = 0 s
[2026-01-10 19:48:40] 2026-01-11 00:48:01,682 | INFO     | . initial setup = 2 s
[2026-01-10 19:48:40] 2026-01-11 00:48:01,683 | INFO     | . payload setup = 6 s
[2026-01-10 19:48:40] 2026-01-11 00:48:01,683 | INFO     | . stage-in = 0 s
[2026-01-10 19:48:40] 2026-01-11 00:48:01,683 | INFO     | . payload execution = 5926 s
[2026-01-10 19:48:40] 2026-01-11 00:48:01,683 | INFO     | . stage-out = 1 s
[2026-01-10 19:48:40] 2026-01-11 00:48:01,683 | INFO     | . log creation = 0 s
[2026-01-10 19:48:40] 2026-01-11 00:48:01,683 | INFO     | ..............................
[2026-01-10 19:48:40] 2026-01-11 00:48:02,856 | INFO     | 
[2026-01-10 19:48:40] 2026-01-11 00:48:02,856 | INFO     | job summary report
[2026-01-10 19:48:40] 2026-01-11 00:48:02,856 | INFO     | --------------------------------------------------
[2026-01-10 19:48:40] 2026-01-11 00:48:02,856 | INFO     | PanDA job id: 6965803268
[2026-01-10 19:48:40] 2026-01-11 00:48:02,856 | INFO     | task id: 47962010
[2026-01-10 19:48:40] 2026-01-11 00:48:02,856 | INFO     | errors: (none)
[2026-01-10 19:48:40] 2026-01-11 00:48:02,857 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:48:40] 2026-01-11 00:48:02,857 | INFO     | pilot state: finished 
[2026-01-10 19:48:40] 2026-01-11 00:48:02,858 | INFO     | transexitcode: 0
[2026-01-10 19:48:40] 2026-01-11 00:48:02,858 | INFO     | exeerrorcode: 0
[2026-01-10 19:48:40] 2026-01-11 00:48:02,858 | INFO     | exeerrordiag: 
[2026-01-10 19:48:40] 2026-01-11 00:48:02,858 | INFO     | exitcode: 0
[2026-01-10 19:48:40] 2026-01-11 00:48:02,858 | INFO     | exitmsg: OK
[2026-01-10 19:48:40] 2026-01-11 00:48:02,858 | INFO     | cpuconsumptiontime: 15540 s
[2026-01-10 19:48:40] 2026-01-11 00:48:02,858 | INFO     | nevents: 50
[2026-01-10 19:48:40] 2026-01-11 00:48:02,858 | INFO     | neventsw: 0
[2026-01-10 19:48:40] 2026-01-11 00:48:02,858 | INFO     | pid: 3274627
[2026-01-10 19:48:40] 2026-01-11 00:48:02,858 | INFO     | pgrp: 3274627
[2026-01-10 19:48:40] 2026-01-11 00:48:02,858 | INFO     | corecount: 10
[2026-01-10 19:48:40] 2026-01-11 00:48:02,858 | INFO     | event service: False
[2026-01-10 19:48:40] 2026-01-11 00:48:02,858 | INFO     | sizes: {0: 2284569, 4: 2284831, 11: 2284859, 5937: 2312409, 5940: 2321403, 5942: 2321459, 5981: 2321833}
[2026-01-10 19:48:40] 2026-01-11 00:48:02,858 | INFO     | --------------------------------------------------
[2026-01-10 19:48:40] 2026-01-11 00:48:02,858 | INFO     | 
[2026-01-10 19:48:40] 2026-01-11 00:48:02,859 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 19:48:40] 2026-01-11 00:48:03,165 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:48:40] 2026-01-11 00:48:03,166 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:48:40] 2026-01-11 00:48:03,166 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:48:40] 2026-01-11 00:48:03,166 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:48:40] 2026-01-11 00:48:03,166 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:48:40] 2026-01-11 00:48:03,166 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:48:40] 2026-01-11 00:48:03,166 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:48:40] 2026-01-11 00:48:03,166 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:48:40] 2026-01-11 00:48:03,166 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:48:40] 2026-01-11 00:48:03,166 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:48:40] 2026-01-11 00:48:03,166 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:48:40] 2026-01-11 00:48:03,166 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:48:40] 2026-01-11 00:48:03,166 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:48:40] 2026-01-11 00:48:03,166 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:48:40] 2026-01-11 00:48:03,167 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:48:40] 2026-01-11 00:48:03,167 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:48:40] 2026-01-11 00:48:03,167 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:48:40] 2026-01-11 00:48:03,167 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:48:40] 2026-01-11 00:48:03,167 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:48:40] 2026-01-11 00:48:03,167 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:48:40] 2026-01-11 00:48:03,167 | INFO     | job 6965803268 has completed (purged errors)
[2026-01-10 19:48:40] 2026-01-11 00:48:03,167 | INFO     | overall cleanup function is called
[2026-01-10 19:48:40] 2026-01-11 00:48:04,335 | INFO     | --- collectZombieJob: --- 10, [3274627]
[2026-01-10 19:48:40] 2026-01-11 00:48:04,409 | INFO     | zombie collector waiting for pid 3274627
[2026-01-10 19:48:40] 2026-01-11 00:48:04,409 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:48:40] 2026-01-11 00:48:04,409 | INFO     | collected zombie processes
[2026-01-10 19:48:40] 2026-01-11 00:48:04,409 | INFO     | will attempt to kill all subprocesses of pid=3274627
[2026-01-10 19:48:40] 2026-01-11 00:48:04,877 | INFO     | PID=3256737 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:48:40] 2026-01-11 00:48:04,877 | INFO     | .. there are 9 such processes running
[2026-01-10 19:48:40] 2026-01-11 00:48:04,980 | INFO     | process IDs to be killed: [3274627] (in reverse order)
[2026-01-10 19:48:40] 2026-01-11 00:48:05,071 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:48:40] 2026-01-11 00:48:05,071 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:48:40] 2026-01-11 00:48:05,080 | INFO     | did not find any defunct processes belonging to 3274627
[2026-01-10 19:48:40] 2026-01-11 00:48:05,089 | INFO     | did not find any defunct processes belonging to 3274627
[2026-01-10 19:48:40] 2026-01-11 00:48:05,090 | INFO     | ready for new job
[2026-01-10 19:48:40] 2026-01-11 00:48:05,090 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:48:40] 2026-01-11 00:48:05,092 | INFO     | ***************************************
[2026-01-10 19:48:40] 2026-01-11 00:48:05,093 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:48:40] 2026-01-11 00:48:05,093 | INFO     | ***************************************
[2026-01-10 19:48:40] 2026-01-11 00:48:05,093 | INFO     | 
[2026-01-10 19:48:40] 2026-01-11 00:48:05,096 | INFO     | architecture information:
[2026-01-10 19:48:40] 2026-01-11 00:48:05,100 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:48:40] 2026-01-11 00:48:05,253 | INFO     | cat /etc/os-release:
[2026-01-10 19:48:40] NAME="CentOS Linux"
[2026-01-10 19:48:40] VERSION="7 (Core)"
[2026-01-10 19:48:40] ID="centos"
[2026-01-10 19:48:40] ID_LIKE="rhel fedora"
[2026-01-10 19:48:40] VERSION_ID="7"
[2026-01-10 19:48:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:48:40] ANSI_COLOR="0;31"
[2026-01-10 19:48:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:48:40] HOME_URL="https://www.centos.org/"
[2026-01-10 19:48:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:48:40] 
[2026-01-10 19:48:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:48:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:48:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:48:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:48:40] 
[2026-01-10 19:48:40] 2026-01-11 00:48:05,254 | INFO     | ***************************************
[2026-01-10 19:48:40] 2026-01-11 00:48:05,757 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 19:48:40] 2026-01-11 00:48:06,076 | INFO     | sufficient remaining disk space (75492229120 B)
[2026-01-10 19:48:40] 2026-01-11 00:48:06,076 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:48:40] 2026-01-11 00:48:06,077 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:48:40] 2026-01-11 00:48:06,077 | INFO     | update_server=False
[2026-01-10 19:48:40] 2026-01-11 00:48:06,077 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:48:40] 2026-01-11 00:48:06,077 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:48:40] 2026-01-11 00:48:06,176 | INFO     | all job control threads have been joined
[2026-01-10 19:48:40] 2026-01-11 00:48:06,456 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:48:40] 2026-01-11 00:48:06,456 | INFO     | aborting loop
[2026-01-10 19:48:40] 2026-01-11 00:48:06,670 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:48:40] 2026-01-11 00:48:06,907 | INFO     | all data control threads have been joined
[2026-01-10 19:48:40] 2026-01-11 00:48:07,083 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:48:40] 2026-01-11 00:48:07,118 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:48:40] 2026-01-11 00:48:07,124 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:48:40] 2026-01-11 00:48:07,182 | INFO     | [job] control thread has finished
[2026-01-10 19:48:40] 2026-01-11 00:48:07,293 | INFO     | [job] validate thread has finished
[2026-01-10 19:48:40] 2026-01-11 00:48:07,312 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:48:40] 2026-01-11 00:48:07,382 | INFO     | all payload control threads have been joined
[2026-01-10 19:48:40] 2026-01-11 00:48:07,462 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:48:40] 2026-01-11 00:48:07,614 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:48:40] 2026-01-11 00:48:07,695 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:48:40] 2026-01-11 00:48:07,821 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:48:40] 2026-01-11 00:48:07,913 | INFO     | [data] control thread has finished
[2026-01-10 19:48:40] 2026-01-11 00:48:08,084 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:48:40] 2026-01-11 00:48:08,318 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:48:40] 2026-01-11 00:48:08,388 | INFO     | [payload] control thread has finished
[2026-01-10 19:48:40] 2026-01-11 00:48:08,827 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:48:40] 2026-01-11 00:48:10,679 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:48:40] 2026-01-11 00:48:16,322 | INFO     | job.realtimelogging is not enabled
[2026-01-10 19:48:40] 2026-01-11 00:48:17,147 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:48:40] 2026-01-11 00:48:17,328 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:48:40] 2026-01-11 00:48:17,731 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140426603280192)>', '<ExcThread(monitor, started 140425943828224)>']
[2026-01-10 19:48:40] 2026-01-11 00:48:22,757 | INFO     | all workflow threads have been joined
[2026-01-10 19:48:40] 2026-01-11 00:48:22,757 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:48:40] 2026-01-11 00:48:22,757 | INFO     | traces error code: 0
[2026-01-10 19:48:40] 2026-01-11 00:48:22,758 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:48:40] 2026-01-11 00:48:38,414 | INFO     | PID=3256737 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:48:40] 2026-01-11 00:48:38,415 | INFO     | .. there are 9 such processes running
[2026-01-10 19:48:40] 2026-01-11 00:48:38,415 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:48:40] 2026-01-11 00:48:38,416 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:48:40] 2026-01-11 00:48:38,416 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:48:40] 2026-01-11 00:48:38,416 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:48:40] 2026-01-11 00:48:38,416 | INFO     | [monitor] control thread has ended
[2026-01-10 19:48:40] 2026-01-11 00:48:38,579 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:48:40] 2026-01-11 00:48:38,598 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:48:40] 2026-01-11 00:48:38,623 [wrapper] pilotpid: 3256737
[2026-01-10 19:48:40] 2026-01-11 00:48:38,669 [wrapper] Pilot exit status: 0
[2026-01-10 19:48:40] 2026-01-11 00:48:38,855 [wrapper] pandaids: 6965803268
[2026-01-10 19:48:40] 2026-01-11 00:48:39,298 [wrapper] cleanup supervisor_pilot 3467298 3256738
[2026-01-10 19:48:40] 2026-01-11 00:48:39,326 [wrapper] Test setup, not cleaning
[2026-01-10 19:48:40] 2026-01-11 00:48:39,383 [wrapper] apfmon messages muted
[2026-01-10 19:48:40] 2026-01-11 00:48:39,405 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:48:40] 2026-01-11 00:48:39,439 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:48:40]  *** Error codes and diagnostics ***
[2026-01-10 19:48:40]     "exeErrorCode": 0,
[2026-01-10 19:48:40]     "exeErrorDiag": "",
[2026-01-10 19:48:40]     "pilotErrorCode": 0,
[2026-01-10 19:48:40]     "pilotErrorDiag": "",
[2026-01-10 19:48:40]  *** Listing of results directory ***
[2026-01-10 19:48:40] total 436768
[2026-01-10 19:48:40] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 19:48:40] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:03 queuedata.json
[2026-01-10 19:48:40] -rwx------. 1 boincer umatlas     36322 Jan 10 18:04 runpilot2-wrapper.sh
[2026-01-10 19:48:40] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:48:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:07 run_atlas
[2026-01-10 19:48:40] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:07 job.xml
[2026-01-10 19:48:40] -rw-r--r--. 2 boincer umatlas 393042859 Jan 10 18:07 EVNT.47962006._000069.pool.root.1
[2026-01-10 19:48:40] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:07 start_atlas.sh
[2026-01-10 19:48:40] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:07 shared
[2026-01-10 19:48:40] -rw-r--r--. 2 boincer umatlas    592618 Jan 10 18:07 input.tar.gz
[2026-01-10 19:48:40] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:07 boinc_lockfile
[2026-01-10 19:48:40] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 18:07 pandaJob.out
[2026-01-10 19:48:40] -rw-------. 1 boincer umatlas        57 Jan 10 18:07 setup.sh.local
[2026-01-10 19:48:40] -rw-------. 1 boincer umatlas    989548 Jan 10 18:08 agis_schedconf.cvmfs.json
[2026-01-10 19:48:40] -rw-------. 1 boincer umatlas   1516240 Jan 10 18:08 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:48:40] drwx------. 5 boincer umatlas      4096 Jan 10 18:08 pilot3
[2026-01-10 19:48:40] -rw-r--r--. 1 boincer umatlas       529 Jan 10 19:21 boinc_task_state.xml
[2026-01-10 19:48:40] -rw-r--r--. 1 boincer umatlas      6841 Jan 10 19:38 init_data.xml
[2026-01-10 19:48:40] -rw-------. 1 boincer umatlas  45828628 Jan 10 19:46 HITS.47962010._002720.pool.root.1
[2026-01-10 19:48:40] -rw-------. 1 boincer umatlas      1041 Jan 10 19:47 memory_monitor_summary.json
[2026-01-10 19:48:40] -rw-------. 1 boincer umatlas   1419247 Jan 10 19:47 log.47962010._002720.job.log.tgz.1
[2026-01-10 19:48:40] -rw-------. 1 boincer umatlas      8571 Jan 10 19:48 heartbeat.json
[2026-01-10 19:48:40] -rw-------. 1 boincer umatlas        95 Jan 10 19:48 pilot_heartbeat.json
[2026-01-10 19:48:40] -rw-------. 1 boincer umatlas       822 Jan 10 19:48 pilotlog.txt
[2026-01-10 19:48:40] -rw-------. 1 boincer umatlas    816840 Jan 10 19:48 log.47962010._002720.job.log.1
[2026-01-10 19:48:40] -rw-------. 1 boincer umatlas       353 Jan 10 19:48 output.list
[2026-01-10 19:48:40] -rw-r--r--. 1 boincer umatlas       620 Jan 10 19:48 runtime_log
[2026-01-10 19:48:40] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 19:48 boinc_mmap_file
[2026-01-10 19:48:40] -rw-------. 1 boincer umatlas   2252800 Jan 10 19:48 result.tar.gz
[2026-01-10 19:48:40] -rw-r--r--. 1 boincer umatlas        27 Jan 10 19:48 wrapper_checkpoint.txt
[2026-01-10 19:48:40] -rw-r--r--. 1 boincer umatlas      9349 Jan 10 19:48 runtime_log.err
[2026-01-10 19:48:40] -rw-------. 1 boincer umatlas       654 Jan 10 19:48 q9QNDm1Bxy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuvmKDm742fmn.diag
[2026-01-10 19:48:40] -rw-r--r--. 1 boincer umatlas     22474 Jan 10 19:48 stderr.txt
[2026-01-10 19:48:40] HITS file was successfully produced:
[2026-01-10 19:48:40] -rw-------. 1 boincer umatlas 45828628 Jan 10 19:46 shared/HITS.pool.root.1
[2026-01-10 19:48:40]  *** Contents of shared directory: ***
[2026-01-10 19:48:40] total 431384
[2026-01-10 19:48:40] -rw-r--r--. 2 boincer umatlas 393042859 Jan 10 18:07 ATLAS.root_0
[2026-01-10 19:48:40] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:07 start_atlas.sh
[2026-01-10 19:48:40] -rw-r--r--. 2 boincer umatlas    592618 Jan 10 18:07 input.tar.gz
[2026-01-10 19:48:40] -rw-------. 1 boincer umatlas  45828628 Jan 10 19:46 HITS.pool.root.1
[2026-01-10 19:48:40] -rw-------. 1 boincer umatlas   2252800 Jan 10 19:48 result.tar.gz
19:49:01 (3251116): run_atlas exited; CPU time 15586.941021
19:49:01 (3251116): called boinc_finish(0)

</stderr_txt>
]]>

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