Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:10:28 (2994): wrapper (7.7.26015): starting
18:10:28 (2994): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 18:10:28] Arguments: --nthreads 8
[2026-01-10 18:10:28] Threads: 8
[2026-01-10 18:10:28] Checking for CVMFS
[2026-01-10 18:10:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:10:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:10:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:10:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:10:28] 2.11.2.0 2893 131156 83424 154996 3 1 15312271 20275200 1 130560 0 32776950 99.811 8566256 33394 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 18:10:28] CVMFS is ok
[2026-01-10 18:10:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:10:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:10:28] Further information can be found at the LHC@home message board.
[2026-01-10 18:10:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:10:28] Checking for apptainer binary...
[2026-01-10 18:10:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:10:28] Running /usr/bin/apptainer --version
[2026-01-10 18:10:28] apptainer version 1.3.2-1.el7
[2026-01-10 18:10:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:10:30] c-204-22.aglt2.org
[2026-01-10 18:10:30] apptainer works
[2026-01-10 18:10:30] Set ATHENA_PROC_NUMBER=8
[2026-01-10 18:10:30] Set ATHENA_CORE_NUMBER=8
[2026-01-10 18:10:30] Starting ATLAS job with PandaID=6965803205
[2026-01-10 18:10:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:14:01]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:14:01]  mtime=0
[2026-01-10 19:14:01]  protocol_id=None
[2026-01-10 19:14:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 19:14:01]  replicas=None
[2026-01-10 19:14:01]  scope=mc16_13TeV
[2026-01-10 19:14:01]  status=None
[2026-01-10 19:14:01]  status_code=0
[2026-01-10 19:14:01]  storage_token=
[2026-01-10 19:14:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6965803205/log.47962010._002657.job.log.tgz.1
[2026-01-10 19:14:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/a9/c3/log.47962010._002657.job.log.tgz.1
[2026-01-10 19:14:01]  workdir=None
[2026-01-10 19:14:01] ]
[2026-01-10 19:14:01] 2026-01-11 00:13:17,672 | INFO     | transferring file log.47962010._002657.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6965803205/log.47962010._002657.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 19:14:01] 2026-01-11 00:13:17,672 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6965803205/log.47962010._002657.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._002657.job
[2026-01-10 19:14:01] 2026-01-11 00:13:17,700 | INFO     | adding to output.list: log.47962010._002657.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/a9/c3/log.47962010._002657.job.log.tgz.
[2026-01-10 19:14:01] 2026-01-11 00:13:17,702 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 19:14:01] 2026-01-11 00:13:17,702 | INFO     | summary of transferred files:
[2026-01-10 19:14:01] 2026-01-11 00:13:17,702 | INFO     |  -- lfn=log.47962010._002657.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 19:14:01] 2026-01-11 00:13:17,703 | INFO     | stage-out finished correctly
[2026-01-10 19:14:01] 2026-01-11 00:13:17,892 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 19:14:01] 2026-01-11 00:13:19,204 | INFO     | time since job start (3750s) is within the limit (349056.0s)
[2026-01-10 19:14:01] 2026-01-11 00:13:20,208 | WARNING  | process 13225 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 19:14:01] 2026-01-11 00:13:20,208 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965803205/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:14:01] 2026-01-11 00:13:20,294 | INFO     | number of running child processes to parent process 13225: 1
[2026-01-10 19:14:01] 2026-01-11 00:13:20,294 | INFO     | maximum number of monitored processes: 16
[2026-01-10 19:14:01] 2026-01-11 00:13:20,743 | INFO     | job 6965803205 has state=finished
[2026-01-10 19:14:01] 2026-01-11 00:13:20,744 | INFO     | preparing for final server update for job 6965803205 in state='finished'
[2026-01-10 19:14:01] 2026-01-11 00:13:20,744 | INFO     | this job has now completed (state=finished)
[2026-01-10 19:14:01] 2026-01-11 00:13:20,744 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 19:14:01] 2026-01-11 00:13:20,745 | INFO     | log transfer has been attempted: DONE
[2026-01-10 19:14:01] 2026-01-11 00:13:20,745 | INFO     | job 6965803205 has finished - writing final server update
[2026-01-10 19:14:01] 2026-01-11 00:13:20,745 | INFO     | total number of processed events: 50 (read)
[2026-01-10 19:14:01] 2026-01-11 00:13:20,746 | INFO     | executing command: lscpu
[2026-01-10 19:14:01] 2026-01-11 00:13:20,776 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 19:14:01] 2026-01-11 00:13:21,210 | INFO     | time since job start (3752s) is within the limit (349056.0s)
[2026-01-10 19:14:01] 2026-01-11 00:13:22,797 | INFO     | monitor loop #285: job 0:6965803205 is in state 'finished'
[2026-01-10 19:14:01] 2026-01-11 00:13:22,798 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:14:01] 2026-01-11 00:13:23,213 | INFO     | time since job start (3754s) is within the limit (349056.0s)
[2026-01-10 19:14:01] 2026-01-11 00:13:25,219 | INFO     | time since job start (3756s) is within the limit (349056.0s)
[2026-01-10 19:14:01] 2026-01-11 00:13:25,301 | INFO     | monitor loop #286: job 0:6965803205 is in state 'finished'
[2026-01-10 19:14:01] 2026-01-11 00:13:25,301 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:14:01] 2026-01-11 00:13:26,674 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 19:14:01] 2026-01-11 00:13:26,678 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2026-01-10 19:14:01] 2026-01-11 00:13:26,681 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965803205/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:14:01] 2026-01-11 00:13:26,682 | INFO     | extracted standard info from prmon json
[2026-01-10 19:14:01] 2026-01-11 00:13:26,682 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:14:01] 2026-01-11 00:13:26,683 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:14:01] 2026-01-11 00:13:26,685 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:14:01] 2026-01-11 00:13:26,685 | INFO     | sum of square deviations: 48805350.092592545
[2026-01-10 19:14:01] 2026-01-11 00:13:26,685 | INFO     | sum of deviations: -3640766128.388889
[2026-01-10 19:14:01] 2026-01-11 00:13:26,686 | INFO     | mean x: 1768088603.8703704
[2026-01-10 19:14:01] 2026-01-11 00:13:26,686 | INFO     | mean y: 2471313.9444444445
[2026-01-10 19:14:01] 2026-01-11 00:13:26,686 | INFO     | intersect: 131897787887.82663
[2026-01-10 19:14:01] 2026-01-11 00:13:26,686 | INFO     | chi2: 0.46472904594241743
[2026-01-10 19:14:01] 2026-01-11 00:13:26,686 | INFO     | current memory leak: -74.60 B/s (using 54 data points, chi2=0.46)
[2026-01-10 19:14:01] 2026-01-11 00:13:26,687 | INFO     | could have reported an average CPU frequency of 1817 MHz (6 samples)
[2026-01-10 19:14:01] 2026-01-11 00:13:26,687 | INFO     | ..............................
[2026-01-10 19:14:01] 2026-01-11 00:13:26,687 | INFO     | . Timing measurements:
[2026-01-10 19:14:01] 2026-01-11 00:13:26,687 | INFO     | . get job = 0 s
[2026-01-10 19:14:01] 2026-01-11 00:13:26,687 | INFO     | . initial setup = 2 s
[2026-01-10 19:14:01] 2026-01-11 00:13:26,687 | INFO     | . payload setup = 9 s
[2026-01-10 19:14:01] 2026-01-11 00:13:26,688 | INFO     | . stage-in = 0 s
[2026-01-10 19:14:01] 2026-01-11 00:13:26,688 | INFO     | . payload execution = 3717 s
[2026-01-10 19:14:01] 2026-01-11 00:13:26,688 | INFO     | . stage-out = 0 s
[2026-01-10 19:14:01] 2026-01-11 00:13:26,688 | INFO     | . log creation = 0 s
[2026-01-10 19:14:01] 2026-01-11 00:13:26,688 | INFO     | ..............................
[2026-01-10 19:14:01] 2026-01-11 00:13:26,784 | INFO     | 
[2026-01-10 19:14:01] 2026-01-11 00:13:26,785 | INFO     | job summary report
[2026-01-10 19:14:01] 2026-01-11 00:13:26,785 | INFO     | --------------------------------------------------
[2026-01-10 19:14:01] 2026-01-11 00:13:26,785 | INFO     | PanDA job id: 6965803205
[2026-01-10 19:14:01] 2026-01-11 00:13:26,785 | INFO     | task id: 47962010
[2026-01-10 19:14:01] 2026-01-11 00:13:26,785 | INFO     | errors: (none)
[2026-01-10 19:14:01] 2026-01-11 00:13:26,786 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:14:01] 2026-01-11 00:13:26,786 | INFO     | pilot state: finished 
[2026-01-10 19:14:01] 2026-01-11 00:13:26,786 | INFO     | transexitcode: 0
[2026-01-10 19:14:01] 2026-01-11 00:13:26,786 | INFO     | exeerrorcode: 0
[2026-01-10 19:14:01] 2026-01-11 00:13:26,786 | INFO     | exeerrordiag: 
[2026-01-10 19:14:01] 2026-01-11 00:13:26,786 | INFO     | exitcode: 0
[2026-01-10 19:14:01] 2026-01-11 00:13:26,787 | INFO     | exitmsg: OK
[2026-01-10 19:14:01] 2026-01-11 00:13:26,787 | INFO     | cpuconsumptiontime: 23917 s
[2026-01-10 19:14:01] 2026-01-11 00:13:26,787 | INFO     | nevents: 50
[2026-01-10 19:14:01] 2026-01-11 00:13:26,787 | INFO     | neventsw: 0
[2026-01-10 19:14:01] 2026-01-11 00:13:26,787 | INFO     | pid: 13225
[2026-01-10 19:14:01] 2026-01-11 00:13:26,787 | INFO     | pgrp: 13225
[2026-01-10 19:14:01] 2026-01-11 00:13:26,788 | INFO     | corecount: 8
[2026-01-10 19:14:01] 2026-01-11 00:13:26,788 | INFO     | event service: False
[2026-01-10 19:14:01] 2026-01-11 00:13:26,788 | INFO     | sizes: {0: 2284398, 1: 2284597, 7: 2284859, 12: 2284887, 3730: 2311471, 3731: 2320649, 3740: 2320839}
[2026-01-10 19:14:01] 2026-01-11 00:13:26,788 | INFO     | --------------------------------------------------
[2026-01-10 19:14:01] 2026-01-11 00:13:26,788 | INFO     | 
[2026-01-10 19:14:01] 2026-01-11 00:13:26,789 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 19:14:01] 2026-01-11 00:13:26,816 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:14:01] 2026-01-11 00:13:26,816 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:14:01] 2026-01-11 00:13:26,817 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:14:01] 2026-01-11 00:13:26,817 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:14:01] 2026-01-11 00:13:26,817 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:14:01] 2026-01-11 00:13:26,817 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:14:01] 2026-01-11 00:13:26,817 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:14:01] 2026-01-11 00:13:26,817 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:14:01] 2026-01-11 00:13:26,817 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:14:01] 2026-01-11 00:13:26,818 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:14:01] 2026-01-11 00:13:26,818 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:14:01] 2026-01-11 00:13:26,818 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:14:01] 2026-01-11 00:13:26,818 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:14:01] 2026-01-11 00:13:26,818 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:14:01] 2026-01-11 00:13:26,818 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:14:01] 2026-01-11 00:13:26,819 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:14:01] 2026-01-11 00:13:26,819 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:14:01] 2026-01-11 00:13:26,819 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:14:01] 2026-01-11 00:13:26,819 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:14:01] 2026-01-11 00:13:26,819 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:14:01] 2026-01-11 00:13:26,820 | INFO     | job 6965803205 has completed (purged errors)
[2026-01-10 19:14:01] 2026-01-11 00:13:26,820 | INFO     | overall cleanup function is called
[2026-01-10 19:14:01] 2026-01-11 00:13:27,835 | INFO     | --- collectZombieJob: --- 10, [13225]
[2026-01-10 19:14:01] 2026-01-11 00:13:27,835 | INFO     | zombie collector waiting for pid 13225
[2026-01-10 19:14:01] 2026-01-11 00:13:27,835 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:14:01] 2026-01-11 00:13:27,835 | INFO     | collected zombie processes
[2026-01-10 19:14:01] 2026-01-11 00:13:27,835 | INFO     | will attempt to kill all subprocesses of pid=13225
[2026-01-10 19:14:01] 2026-01-11 00:13:27,928 | INFO     | process IDs to be killed: [13225] (in reverse order)
[2026-01-10 19:14:01] 2026-01-11 00:13:27,991 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:14:01] 2026-01-11 00:13:27,991 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:14:01] 2026-01-11 00:13:27,995 | INFO     | did not find any defunct processes belonging to 13225
[2026-01-10 19:14:01] 2026-01-11 00:13:27,999 | INFO     | did not find any defunct processes belonging to 13225
[2026-01-10 19:14:01] 2026-01-11 00:13:27,999 | INFO     | ready for new job
[2026-01-10 19:14:01] 2026-01-11 00:13:27,999 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:14:01] 2026-01-11 00:13:28,001 | INFO     | ***************************************
[2026-01-10 19:14:01] 2026-01-11 00:13:28,001 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:14:01] 2026-01-11 00:13:28,001 | INFO     | ***************************************
[2026-01-10 19:14:01] 2026-01-11 00:13:28,001 | INFO     | 
[2026-01-10 19:14:01] 2026-01-11 00:13:28,002 | INFO     | architecture information:
[2026-01-10 19:14:01] 2026-01-11 00:13:28,003 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:14:01] 2026-01-11 00:13:28,020 | INFO     | cat /etc/os-release:
[2026-01-10 19:14:01] NAME="CentOS Linux"
[2026-01-10 19:14:01] VERSION="7 (Core)"
[2026-01-10 19:14:01] ID="centos"
[2026-01-10 19:14:01] ID_LIKE="rhel fedora"
[2026-01-10 19:14:01] VERSION_ID="7"
[2026-01-10 19:14:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:14:01] ANSI_COLOR="0;31"
[2026-01-10 19:14:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:14:01] HOME_URL="https://www.centos.org/"
[2026-01-10 19:14:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:14:01] 
[2026-01-10 19:14:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:14:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:14:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:14:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:14:01] 
[2026-01-10 19:14:01] 2026-01-11 00:13:28,021 | INFO     | ***************************************
[2026-01-10 19:14:01] 2026-01-11 00:13:28,524 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 19:14:01] 2026-01-11 00:13:28,543 | INFO     | sufficient remaining disk space (18341691392 B)
[2026-01-10 19:14:01] 2026-01-11 00:13:28,544 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:14:01] 2026-01-11 00:13:28,544 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:14:01] 2026-01-11 00:13:28,544 | INFO     | update_server=False
[2026-01-10 19:14:01] 2026-01-11 00:13:28,544 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:14:01] 2026-01-11 00:13:28,545 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:14:01] 2026-01-11 00:13:28,545 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:14:01] 2026-01-11 00:13:28,545 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:14:01] 2026-01-11 00:13:28,603 | INFO     | all payload control threads have been joined
[2026-01-10 19:14:01] 2026-01-11 00:13:28,807 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:14:01] 2026-01-11 00:13:28,807 | INFO     | aborting loop
[2026-01-10 19:14:01] 2026-01-11 00:13:29,158 | INFO     | all job control threads have been joined
[2026-01-10 19:14:01] 2026-01-11 00:13:29,468 | INFO     | all data control threads have been joined
[2026-01-10 19:14:01] 2026-01-11 00:13:29,546 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:14:01] 2026-01-11 00:13:29,549 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:14:01] 2026-01-11 00:13:29,609 | INFO     | [payload] control thread has finished
[2026-01-10 19:14:01] 2026-01-11 00:13:29,813 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:14:01] 2026-01-11 00:13:29,834 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:14:01] 2026-01-11 00:13:30,163 | INFO     | [job] control thread has finished
[2026-01-10 19:14:01] 2026-01-11 00:13:30,283 | INFO     | [job] validate thread has finished
[2026-01-10 19:14:01] 2026-01-11 00:13:30,293 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:14:01] 2026-01-11 00:13:30,338 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:14:01] 2026-01-11 00:13:30,392 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:14:01] 2026-01-11 00:13:30,473 | INFO     | [data] control thread has finished
[2026-01-10 19:14:01] 2026-01-11 00:13:30,551 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:14:01] 2026-01-11 00:13:30,587 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:14:01] 2026-01-11 00:13:30,629 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:14:01] 2026-01-11 00:13:30,726 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:14:01] 2026-01-11 00:13:32,552 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:14:01] 2026-01-11 00:13:54,287 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:14:01] 2026-01-11 00:13:55,891 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139813824968512)>', '<ExcThread(monitor, started 139812703028992)>']
[2026-01-10 19:14:01] 2026-01-11 00:13:58,346 | INFO     | PID=6745 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 19:14:01] 2026-01-11 00:13:58,349 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:14:01] 2026-01-11 00:13:58,350 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:14:01] 2026-01-11 00:13:58,350 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:14:01] 2026-01-11 00:13:58,350 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:14:01] 2026-01-11 00:13:58,351 | INFO     | [monitor] control thread has ended
[2026-01-10 19:14:01] 2026-01-11 00:14:00,908 | INFO     | all workflow threads have been joined
[2026-01-10 19:14:01] 2026-01-11 00:14:00,908 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:14:01] 2026-01-11 00:14:00,909 | INFO     | traces error code: 0
[2026-01-10 19:14:01] 2026-01-11 00:14:00,909 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:14:01] 2026-01-11 00:14:01,037 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:14:01] 2026-01-11 00:14:01,042 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:14:01] 2026-01-11 00:14:01,048 [wrapper] pilotpid: 6745
[2026-01-10 19:14:01] 2026-01-11 00:14:01,052 [wrapper] Pilot exit status: 0
[2026-01-10 19:14:01] 2026-01-11 00:14:01,072 [wrapper] pandaids: 6965803205
[2026-01-10 19:14:01] 2026-01-11 00:14:01,116 [wrapper] cleanup supervisor_pilot 11875 6746
[2026-01-10 19:14:01] 2026-01-11 00:14:01,122 [wrapper] Test setup, not cleaning
[2026-01-10 19:14:01] 2026-01-11 00:14:01,127 [wrapper] apfmon messages muted
[2026-01-10 19:14:01] 2026-01-11 00:14:01,132 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:14:01] 2026-01-11 00:14:01,137 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:14:01]  *** Error codes and diagnostics ***
[2026-01-10 19:14:01]     "exeErrorCode": 0,
[2026-01-10 19:14:01]     "exeErrorDiag": "",
[2026-01-10 19:14:01]     "pilotErrorCode": 0,
[2026-01-10 19:14:01]     "pilotErrorDiag": "",
[2026-01-10 19:14:01]  *** Listing of results directory ***
[2026-01-10 19:14:01] total 434348
[2026-01-10 19:14:01] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 19:14:01] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 18:03 queuedata.json
[2026-01-10 19:14:01] -rwx------ 1 boincer umatlas     36322 Jan 10 18:05 runpilot2-wrapper.sh
[2026-01-10 19:14:01] -rw-r--r-- 1 boincer umatlas       100 Jan 10 18:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:14:01] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 18:10 run_atlas
[2026-01-10 19:14:01] -rw-r--r-- 1 boincer umatlas       105 Jan 10 18:10 job.xml
[2026-01-10 19:14:01] -rw-r--r-- 2 boincer umatlas 392179395 Jan 10 18:10 EVNT.47962006._000036.pool.root.1
[2026-01-10 19:14:01] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 18:10 start_atlas.sh
[2026-01-10 19:14:01] drwxrwx--x 2 boincer umatlas      4096 Jan 10 18:10 shared
[2026-01-10 19:14:01] -rw-r--r-- 2 boincer umatlas    592624 Jan 10 18:10 input.tar.gz
[2026-01-10 19:14:01] -rw-r--r-- 1 boincer umatlas         0 Jan 10 18:10 boinc_lockfile
[2026-01-10 19:14:01] -rw-r--r-- 1 boincer umatlas      2890 Jan 10 18:10 pandaJob.out
[2026-01-10 19:14:01] -rw------- 1 boincer umatlas        57 Jan 10 18:10 setup.sh.local
[2026-01-10 19:14:01] -rw------- 1 boincer umatlas    989548 Jan 10 18:10 agis_schedconf.cvmfs.json
[2026-01-10 19:14:01] -rw------- 1 boincer umatlas   1516240 Jan 10 18:10 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:14:01] drwx------ 5 boincer umatlas      4096 Jan 10 18:10 pilot3
[2026-01-10 19:14:01] -rw-r--r-- 1 boincer umatlas       529 Jan 10 18:59 boinc_task_state.xml
[2026-01-10 19:14:01] -rw-r--r-- 1 boincer umatlas      5909 Jan 10 19:10 init_data.xml
[2026-01-10 19:14:01] -rw------- 1 boincer umatlas  45116177 Jan 10 19:13 HITS.47962010._002657.pool.root.1
[2026-01-10 19:14:01] -rw------- 1 boincer umatlas      1049 Jan 10 19:13 memory_monitor_summary.json
[2026-01-10 19:14:01] -rw------- 1 boincer umatlas   1211996 Jan 10 19:13 log.47962010._002657.job.log.tgz.1
[2026-01-10 19:14:01] -rw------- 1 boincer umatlas      8611 Jan 10 19:13 heartbeat.json
[2026-01-10 19:14:01] -rw-r--r-- 1 boincer umatlas        27 Jan 10 19:13 wrapper_checkpoint.txt
[2026-01-10 19:14:01] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 19:13 boinc_mmap_file
[2026-01-10 19:14:01] -rw------- 1 boincer umatlas        95 Jan 10 19:13 pilot_heartbeat.json
[2026-01-10 19:14:01] -rw------- 1 boincer umatlas      4745 Jan 10 19:14 pilotlog.txt
[2026-01-10 19:14:01] -rw------- 1 boincer umatlas    570758 Jan 10 19:14 log.47962010._002657.job.log.1
[2026-01-10 19:14:01] -rw------- 1 boincer umatlas       353 Jan 10 19:14 output.list
[2026-01-10 19:14:01] -rw-r--r-- 1 boincer umatlas       620 Jan 10 19:14 runtime_log
[2026-01-10 19:14:01] -rw------- 1 boincer umatlas   1802240 Jan 10 19:14 result.tar.gz
[2026-01-10 19:14:01] -rw-r--r-- 1 boincer umatlas      9342 Jan 10 19:14 runtime_log.err
[2026-01-10 19:14:01] -rw------- 1 boincer umatlas       659 Jan 10 19:14 3odNDmICxy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtdhKDmAJMQGm.diag
[2026-01-10 19:14:01] -rw-r--r-- 1 boincer umatlas     21804 Jan 10 19:14 stderr.txt
[2026-01-10 19:14:01] HITS file was successfully produced:
[2026-01-10 19:14:01] -rw------- 1 boincer umatlas 45116177 Jan 10 19:13 shared/HITS.pool.root.1
[2026-01-10 19:14:01]  *** Contents of shared directory: ***
[2026-01-10 19:14:01] total 429404
[2026-01-10 19:14:01] -rw-r--r-- 2 boincer umatlas 392179395 Jan 10 18:10 ATLAS.root_0
[2026-01-10 19:14:01] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 18:10 start_atlas.sh
[2026-01-10 19:14:01] -rw-r--r-- 2 boincer umatlas    592624 Jan 10 18:10 input.tar.gz
[2026-01-10 19:14:01] -rw------- 1 boincer umatlas  45116177 Jan 10 19:13 HITS.pool.root.1
[2026-01-10 19:14:01] -rw------- 1 boincer umatlas   1802240 Jan 10 19:14 result.tar.gz
19:14:02 (2994): run_atlas exited; CPU time 23616.148625
19:14:02 (2994): called boinc_finish(0)

</stderr_txt>
]]>

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