Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:16:14 (8197): wrapper (7.7.26015): starting
12:16:14 (8197): wrapper: running run_atlas (--nthreads 8)
[2026-01-11 12:16:14] Arguments: --nthreads 8
[2026-01-11 12:16:14] Threads: 8
[2026-01-11 12:16:14] Checking for CVMFS
[2026-01-11 12:16:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 12:16:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 12:16:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 12:16:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 12:16:18] 2.11.2.0 2467 38222 125976 155015 1 20 23374889 25165824 96 130560 0 18322035 99.806 12007782 2995 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-11 12:16:18] CVMFS is ok
[2026-01-11 12:16:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 12:16:18] Checking for apptainer binary...
[2026-01-11 12:16:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 12:16:18] Running /usr/bin/apptainer --version
[2026-01-11 12:16:18] apptainer version 1.3.2-1.el7
[2026-01-11 12:16:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 12:16:24] cg-vwn487.simple-grid.lan
[2026-01-11 12:16:24] apptainer works
[2026-01-11 12:16:24] Set ATHENA_PROC_NUMBER=8
[2026-01-11 12:16:24] Set ATHENA_CORE_NUMBER=8
[2026-01-11 12:16:25] Starting ATLAS job with PandaID=6965803217
[2026-01-11 12:16:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 14:38:01]  *** The last 200 lines of the pilot log: ***
[2026-01-11 14:38:01] 2026-01-11 13:36:56,410 | INFO     | time since job start (8179s) is within the limit (349056.0s)
[2026-01-11 14:38:01] 2026-01-11 13:36:58,418 | INFO     | time since job start (8181s) is within the limit (349056.0s)
[2026-01-11 14:38:01] 2026-01-11 13:36:58,431 | INFO     | monitor loop #667: job 0:6965803217 is in state 'finished'
[2026-01-11 14:38:01] 2026-01-11 13:36:58,432 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 14:38:01] 2026-01-11 13:37:00,424 | INFO     | time since job start (8183s) is within the limit (349056.0s)
[2026-01-11 14:38:01] 2026-01-11 13:37:00,935 | INFO     | monitor loop #668: job 0:6965803217 is in state 'finished'
[2026-01-11 14:38:01] 2026-01-11 13:37:00,936 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 14:38:01] 2026-01-11 13:37:02,430 | INFO     | time since job start (8185s) is within the limit (349056.0s)
[2026-01-11 14:38:01] 2026-01-11 13:37:03,450 | INFO     | monitor loop #669: job 0:6965803217 is in state 'finished'
[2026-01-11 14:38:01] 2026-01-11 13:37:03,451 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 14:38:01] 2026-01-11 13:37:04,436 | INFO     | time since job start (8187s) is within the limit (349056.0s)
[2026-01-11 14:38:01] 2026-01-11 13:37:05,545 | INFO     | PID=11956 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 14:38:01] 2026-01-11 13:37:05,546 | INFO     | .. there are 2 such processes running
[2026-01-11 14:38:01] 2026-01-11 13:37:05,966 | INFO     | monitor loop #670: job 0:6965803217 is in state 'finished'
[2026-01-11 14:38:01] 2026-01-11 13:37:05,967 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 14:38:01] 2026-01-11 13:37:06,548 | INFO     | time since job start (8189s) is within the limit (349056.0s)
[2026-01-11 14:38:01] 2026-01-11 13:37:07,956 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 14:38:01] 2026-01-11 13:37:07,957 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-11 14:38:01] 2026-01-11 13:37:07,959 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6965803217/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 14:38:01] 2026-01-11 13:37:07,959 | INFO     | extracted standard info from prmon json
[2026-01-11 14:38:01] 2026-01-11 13:37:07,960 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 14:38:01] 2026-01-11 13:37:07,960 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 14:38:01] 2026-01-11 13:37:07,963 | INFO     | fitting pss+swap vs Time
[2026-01-11 14:38:01] 2026-01-11 13:37:07,963 | INFO     | sum of square deviations: 591185013.9354851
[2026-01-11 14:38:01] 2026-01-11 13:37:07,964 | INFO     | sum of deviations: 34062886963.645126
[2026-01-11 14:38:01] 2026-01-11 13:37:07,964 | INFO     | mean x: 1768134738.1290324
[2026-01-11 14:38:01] 2026-01-11 13:37:07,964 | INFO     | mean y: 1781782.7096774194
[2026-01-11 14:38:01] 2026-01-11 13:37:07,964 | INFO     | intersect: -101874572153.34604
[2026-01-11 14:38:01] 2026-01-11 13:37:07,965 | INFO     | chi2: 39.226920906861544
[2026-01-11 14:38:01] 2026-01-11 13:37:07,965 | INFO     | sum of square deviations: 522537746.87394893
[2026-01-11 14:38:01] 2026-01-11 13:37:07,966 | INFO     | sum of deviations: 60839324353.672325
[2026-01-11 14:38:01] 2026-01-11 13:37:07,966 | INFO     | mean x: 1768134585.6554623
[2026-01-11 14:38:01] 2026-01-11 13:37:07,966 | INFO     | mean y: 1841362.5042016807
[2026-01-11 14:38:01] 2026-01-11 13:37:07,966 | INFO     | intersect: -205862929558.22348
[2026-01-11 14:38:01] 2026-01-11 13:37:07,966 | INFO     | chi2: 33.052488358932216
[2026-01-11 14:38:01] 2026-01-11 13:37:07,966 | INFO     | current chi2=33.052488358932216 (change=15.740293668701641 %)
[2026-01-11 14:38:01] 2026-01-11 13:37:07,966 | INFO     | right removable region: 118
[2026-01-11 14:38:01] 2026-01-11 13:37:07,967 | INFO     | sum of square deviations: 522490166.87394893
[2026-01-11 14:38:01] 2026-01-11 13:37:07,967 | INFO     | sum of deviations: 641691013.8908005
[2026-01-11 14:38:01] 2026-01-11 13:37:07,968 | INFO     | mean x: 1768134890.6554623
[2026-01-11 14:38:01] 2026-01-11 13:37:07,968 | INFO     | mean y: 1856015.168067227
[2026-01-11 14:38:01] 2026-01-11 13:37:07,968 | INFO     | intersect: -2169660967.5699544
[2026-01-11 14:38:01] 2026-01-11 13:37:07,968 | INFO     | chi2: 31.693622845771813
[2026-01-11 14:38:01] 2026-01-11 13:37:07,968 | INFO     | current chi2=31.693622845771813 (change=19.204408316871007 %)
[2026-01-11 14:38:01] 2026-01-11 13:37:07,968 | INFO     | left removable region: 10
[2026-01-11 14:38:01] 2026-01-11 13:37:07,969 | INFO     | sum of square deviations: 390574306.66666734
[2026-01-11 14:38:01] 2026-01-11 13:37:07,969 | INFO     | sum of deviations: 3914301903.8889303
[2026-01-11 14:38:01] 2026-01-11 13:37:07,969 | INFO     | mean x: 1768134860.2222223
[2026-01-11 14:38:01] 2026-01-11 13:37:07,970 | INFO     | mean y: 2011033.8796296297
[2026-01-11 14:38:01] 2026-01-11 13:37:07,970 | INFO     | intersect: -17718083533.44407
[2026-01-11 14:38:01] 2026-01-11 13:37:07,970 | INFO     | chi2: 19.936262302569148
[2026-01-11 14:38:01] 2026-01-11 13:37:07,970 | INFO     | current memory leak: 10.02 B/s (using 108 data points, chi2=19.94)
[2026-01-11 14:38:01] 2026-01-11 13:37:07,970 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-01-11 14:38:01] 2026-01-11 13:37:07,971 | INFO     | ..............................
[2026-01-11 14:38:01] 2026-01-11 13:37:07,971 | INFO     | . Timing measurements:
[2026-01-11 14:38:01] 2026-01-11 13:37:07,971 | INFO     | . get job = 0 s
[2026-01-11 14:38:01] 2026-01-11 13:37:07,971 | INFO     | . initial setup = 8 s
[2026-01-11 14:38:01] 2026-01-11 13:37:07,971 | INFO     | . payload setup = 182 s
[2026-01-11 14:38:01] 2026-01-11 13:37:07,971 | INFO     | . stage-in = 0 s
[2026-01-11 14:38:01] 2026-01-11 13:37:07,971 | INFO     | . payload execution = 7680 s
[2026-01-11 14:38:01] 2026-01-11 13:37:07,971 | INFO     | . stage-out = 3 s
[2026-01-11 14:38:01] 2026-01-11 13:37:07,972 | INFO     | . log creation = 1 s
[2026-01-11 14:38:01] 2026-01-11 13:37:07,972 | INFO     | ..............................
[2026-01-11 14:38:01] 2026-01-11 13:37:08,100 | INFO     | 
[2026-01-11 14:38:01] 2026-01-11 13:37:08,100 | INFO     | job summary report
[2026-01-11 14:38:01] 2026-01-11 13:37:08,100 | INFO     | --------------------------------------------------
[2026-01-11 14:38:01] 2026-01-11 13:37:08,100 | INFO     | PanDA job id: 6965803217
[2026-01-11 14:38:01] 2026-01-11 13:37:08,100 | INFO     | task id: 47962010
[2026-01-11 14:38:01] 2026-01-11 13:37:08,100 | INFO     | errors: (none)
[2026-01-11 14:38:01] 2026-01-11 13:37:08,100 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 14:38:01] 2026-01-11 13:37:08,100 | INFO     | pilot state: finished 
[2026-01-11 14:38:01] 2026-01-11 13:37:08,101 | INFO     | transexitcode: 0
[2026-01-11 14:38:01] 2026-01-11 13:37:08,101 | INFO     | exeerrorcode: 0
[2026-01-11 14:38:01] 2026-01-11 13:37:08,101 | INFO     | exeerrordiag: 
[2026-01-11 14:38:01] 2026-01-11 13:37:08,101 | INFO     | exitcode: 0
[2026-01-11 14:38:01] 2026-01-11 13:37:08,101 | INFO     | exitmsg: OK
[2026-01-11 14:38:01] 2026-01-11 13:37:08,101 | INFO     | cpuconsumptiontime: 18400 s
[2026-01-11 14:38:01] 2026-01-11 13:37:08,101 | INFO     | nevents: 50
[2026-01-11 14:38:01] 2026-01-11 13:37:08,101 | INFO     | neventsw: 0
[2026-01-11 14:38:01] 2026-01-11 13:37:08,101 | INFO     | pid: 18405
[2026-01-11 14:38:01] 2026-01-11 13:37:08,101 | INFO     | pgrp: 18405
[2026-01-11 14:38:01] 2026-01-11 13:37:08,101 | INFO     | corecount: 8
[2026-01-11 14:38:01] 2026-01-11 13:37:08,102 | INFO     | event service: False
[2026-01-11 14:38:01] 2026-01-11 13:37:08,102 | INFO     | sizes: {0: 2284342, 1: 2284597, 12: 2284597, 23: 2284625, 34: 2284653, 44: 2284681, 55: 2284837, 66: 2284865, 77: 2284893, 87: 2284949, 98: 2284977, 105: 2285547, 
[2026-01-11 14:38:01] 2026-01-11 13:37:08,102 | INFO     | --------------------------------------------------
[2026-01-11 14:38:01] 2026-01-11 13:37:08,102 | INFO     | 
[2026-01-11 14:38:01] 2026-01-11 13:37:08,102 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-01-11 14:38:01] 2026-01-11 13:37:08,554 | INFO     | time since job start (8191s) is within the limit (349056.0s)
[2026-01-11 14:38:01] 2026-01-11 13:37:08,680 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 14:38:01] 2026-01-11 13:37:08,680 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 14:38:01] 2026-01-11 13:37:08,680 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 14:38:01] 2026-01-11 13:37:08,680 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 14:38:01] 2026-01-11 13:37:08,681 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 14:38:01] 2026-01-11 13:37:08,681 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 14:38:01] 2026-01-11 13:37:08,681 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 14:38:01] 2026-01-11 13:37:08,681 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 14:38:01] 2026-01-11 13:37:08,681 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 14:38:01] 2026-01-11 13:37:08,681 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 14:38:01] 2026-01-11 13:37:08,681 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 14:38:01] 2026-01-11 13:37:08,681 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 14:38:01] 2026-01-11 13:37:08,681 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 14:38:01] 2026-01-11 13:37:08,682 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 14:38:01] 2026-01-11 13:37:08,682 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 14:38:01] 2026-01-11 13:37:08,682 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 14:38:01] 2026-01-11 13:37:08,682 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 14:38:01] 2026-01-11 13:37:08,682 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 14:38:01] 2026-01-11 13:37:08,682 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 14:38:01] 2026-01-11 13:37:08,682 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 14:38:01] 2026-01-11 13:37:08,682 | INFO     | job 6965803217 has completed (purged errors)
[2026-01-11 14:38:01] 2026-01-11 13:37:08,683 | INFO     | overall cleanup function is called
[2026-01-11 14:38:01] 2026-01-11 13:37:09,697 | INFO     | --- collectZombieJob: --- 10, [18405]
[2026-01-11 14:38:01] 2026-01-11 13:37:09,698 | INFO     | zombie collector waiting for pid 18405
[2026-01-11 14:38:01] 2026-01-11 13:37:09,698 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 14:38:01] 2026-01-11 13:37:09,698 | INFO     | collected zombie processes
[2026-01-11 14:38:01] 2026-01-11 13:37:09,698 | INFO     | will attempt to kill all subprocesses of pid=18405
[2026-01-11 14:38:01] 2026-01-11 13:37:09,792 | INFO     | process IDs to be killed: [18405] (in reverse order)
[2026-01-11 14:38:01] 2026-01-11 13:37:10,723 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 14:38:01] 2026-01-11 13:37:10,723 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 14:38:01] 2026-01-11 13:37:10,725 | INFO     | did not find any defunct processes belonging to 18405
[2026-01-11 14:38:01] 2026-01-11 13:37:10,727 | INFO     | did not find any defunct processes belonging to 18405
[2026-01-11 14:38:01] 2026-01-11 13:37:10,727 | INFO     | ready for new job
[2026-01-11 14:38:01] 2026-01-11 13:37:10,728 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 14:38:01] 2026-01-11 13:37:10,729 | INFO     | ***************************************
[2026-01-11 14:38:01] 2026-01-11 13:37:10,729 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 14:38:01] 2026-01-11 13:37:10,729 | INFO     | ***************************************
[2026-01-11 14:38:01] 2026-01-11 13:37:10,730 | INFO     | 
[2026-01-11 14:38:01] 2026-01-11 13:37:10,730 | INFO     | pilot is running in a VM
[2026-01-11 14:38:01] 2026-01-11 13:37:10,730 | INFO     | architecture information:
[2026-01-11 14:38:01] 2026-01-11 13:37:10,731 | INFO     | executing command: cat /etc/os-release
[2026-01-11 14:38:01] 2026-01-11 13:37:10,931 | INFO     | cat /etc/os-release:
[2026-01-11 14:38:01] NAME="CentOS Linux"
[2026-01-11 14:38:01] VERSION="7 (Core)"
[2026-01-11 14:38:01] ID="centos"
[2026-01-11 14:38:01] ID_LIKE="rhel fedora"
[2026-01-11 14:38:01] VERSION_ID="7"
[2026-01-11 14:38:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 14:38:01] ANSI_COLOR="0;31"
[2026-01-11 14:38:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 14:38:01] HOME_URL="https://www.centos.org/"
[2026-01-11 14:38:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 14:38:01] 
[2026-01-11 14:38:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 14:38:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 14:38:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 14:38:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 14:38:01] 
[2026-01-11 14:38:01] 2026-01-11 13:37:10,931 | INFO     | ***************************************
[2026-01-11 14:38:01] 2026-01-11 13:37:11,435 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-01-11 14:38:01] 2026-01-11 13:37:11,723 | INFO     | sufficient remaining disk space (497186504704 B)
[2026-01-11 14:38:01] 2026-01-11 13:37:11,723 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 14:38:01] 2026-01-11 13:37:11,724 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 14:38:01] 2026-01-11 13:37:11,724 | INFO     | update_server=False
[2026-01-11 14:38:01] 2026-01-11 13:37:11,724 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 14:38:01] 2026-01-11 13:37:11,726 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 14:38:01] 2026-01-11 13:37:11,744 | INFO     | all data control threads have been joined
[2026-01-11 14:38:01] 2026-01-11 13:37:11,941 | INFO     | all payload control threads have been joined
[2026-01-11 14:38:01] 2026-01-11 13:37:12,008 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 14:38:01] 2026-01-11 13:37:12,009 | INFO     | aborting loop
[2026-01-11 14:38:01] 2026-01-11 13:37:12,071 | INFO     | all job control threads have been joined
[2026-01-11 14:38:01] 2026-01-11 13:37:12,286 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 14:38:01] 2026-01-11 13:37:12,730 | INFO     | [job] retrieve thread has finished
[2026-01-11 14:38:01] 2026-01-11 13:37:12,744 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 14:38:01] 2026-01-11 13:37:12,750 | INFO     | [data] control thread has finished
[2026-01-11 14:38:01] 2026-01-11 13:37:12,762 | INFO     | [job] validate thread has finished
[2026-01-11 14:38:01] 2026-01-11 13:37:12,887 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 14:38:01] 2026-01-11 13:37:12,948 | INFO     | [payload] control thread has finished
[2026-01-11 14:38:01] 2026-01-11 13:37:13,015 | INFO     | [job] job monitor thread has finished
[2026-01-11 14:38:01] 2026-01-11 13:37:13,078 | INFO     | [job] control thread has finished
[2026-01-11 14:38:01] 2026-01-11 13:37:13,124 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 14:38:01] 2026-01-11 13:37:13,708 | INFO     | [data] copytool_in thread has finished
[2026-01-11 14:38:01] 2026-01-11 13:37:13,817 | INFO     | [payload] failed_post thread has finished
[2026-01-11 14:38:01] 2026-01-11 13:37:14,025 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 14:38:01] 2026-01-11 13:37:14,065 | INFO     | [payload] validate_post thread has finished
[2026-01-11 14:38:01] 2026-01-11 13:37:14,126 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 14:38:01] 2026-01-11 13:37:14,132 | INFO     | [job] queue monitor thread has finished
[2026-01-11 14:38:01] 2026-01-11 13:37:14,293 | INFO     | [data] copytool_out thread has finished
[2026-01-11 14:38:01] 2026-01-11 13:37:15,736 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 14:38:01] 2026-01-11 13:37:41,656 | INFO     | PID=11956 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 14:38:01] 2026-01-11 13:37:41,656 | INFO     | .. there are 2 such processes running
[2026-01-11 14:38:01] 2026-01-11 13:37:41,657 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 14:38:01] 2026-01-11 13:37:41,657 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 14:38:01] 2026-01-11 13:37:41,657 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 14:38:01] 2026-01-11 13:37:50,265 | INFO     | [monitor] cgroup control has ended
[2026-01-11 14:38:01] 2026-01-11 13:37:51,501 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139711089293120)>', '<ExcThread(monitor, started 139710345225984)>']
[2026-01-11 14:38:01] 2026-01-11 13:37:51,716 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 14:38:01] 2026-01-11 13:37:51,717 | INFO     | [monitor] control thread has ended
[2026-01-11 14:38:01] 2026-01-11 13:37:56,526 | INFO     | all workflow threads have been joined
[2026-01-11 14:38:01] 2026-01-11 13:37:56,527 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 14:38:01] 2026-01-11 13:37:56,527 | INFO     | traces error code: 0
[2026-01-11 14:38:01] 2026-01-11 13:37:56,527 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 14:38:01] 2026-01-11 13:37:56,889 [wrapper] ==== pilot stdout END ====
[2026-01-11 14:38:01] 2026-01-11 13:37:56,997 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 14:38:01] 2026-01-11 13:37:57,087 [wrapper] pilotpid: 11956
[2026-01-11 14:38:01] 2026-01-11 13:37:57,205 [wrapper] Pilot exit status: 0
[2026-01-11 14:38:01] 2026-01-11 13:37:57,609 [wrapper] pandaids: 6965803217
[2026-01-11 14:38:01] 2026-01-11 13:37:58,244 [wrapper] cleanup supervisor_pilot  3260 11957
[2026-01-11 14:38:01] 2026-01-11 13:37:58,327 [wrapper] Test setup, not cleaning
[2026-01-11 14:38:01] 2026-01-11 13:37:58,480 [wrapper] apfmon messages muted
[2026-01-11 14:38:01] 2026-01-11 13:37:58,528 [wrapper] ==== wrapper stdout END ====
[2026-01-11 14:38:01] 2026-01-11 13:37:58,591 [wrapper] ==== wrapper stderr END ====
[2026-01-11 14:38:01]  *** Error codes and diagnostics ***
[2026-01-11 14:38:01]     "exeErrorCode": 0,
[2026-01-11 14:38:01]     "exeErrorDiag": "",
[2026-01-11 14:38:01]     "pilotErrorCode": 0,
[2026-01-11 14:38:01]     "pilotErrorDiag": "",
[2026-01-11 14:38:01]  *** Listing of results directory ***
[2026-01-11 14:38:01] total 431916
[2026-01-11 14:38:01] -rw-r--r--. 1 boinc boinc    579449 Jan 11 00:00 pilot3.tar.gz
[2026-01-11 14:38:01] -rw-r--r--. 1 boinc boinc      5112 Jan 11 00:03 queuedata.json
[2026-01-11 14:38:01] -rwx------. 1 boinc boinc     36322 Jan 11 00:04 runpilot2-wrapper.sh
[2026-01-11 14:38:01] -rw-r--r--. 1 boinc boinc       100 Jan 11 12:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 14:38:01] -rwxr-xr-x. 1 boinc boinc      7986 Jan 11 12:16 run_atlas
[2026-01-11 14:38:01] -rw-r--r--. 1 boinc boinc       105 Jan 11 12:16 job.xml
[2026-01-11 14:38:01] -rw-r--r--. 1 boinc boinc      6390 Jan 11 12:16 init_data.xml
[2026-01-11 14:38:01] -rw-r--r--. 2 boinc boinc 392179395 Jan 11 12:16 EVNT.47962006._000036.pool.root.1
[2026-01-11 14:38:01] -rw-r--r--. 2 boinc boinc     15847 Jan 11 12:16 start_atlas.sh
[2026-01-11 14:38:01] drwxrwx--x. 2 boinc boinc        68 Jan 11 12:16 shared
[2026-01-11 14:38:01] -rw-r--r--. 2 boinc boinc    592621 Jan 11 12:16 input.tar.gz
[2026-01-11 14:38:01] -rw-r--r--. 1 boinc boinc         0 Jan 11 12:16 boinc_lockfile
[2026-01-11 14:38:01] -rw-r--r--. 1 boinc boinc      2890 Jan 11 12:16 pandaJob.out
[2026-01-11 14:38:01] -rw-------. 1 boinc boinc    989548 Jan 11 12:20 agis_schedconf.cvmfs.json
[2026-01-11 14:38:01] -rw-------. 1 boinc boinc   1516240 Jan 11 12:20 agis_ddmendpoints.agis.ALL.json
[2026-01-11 14:38:01] drwx------. 5 boinc boinc      4096 Jan 11 12:20 pilot3
[2026-01-11 14:38:01] -rw-r--r--. 1 boinc boinc       530 Jan 11 14:08 boinc_task_state.xml
[2026-01-11 14:38:01] -rw-------. 1 boinc boinc  41430076 Jan 11 14:34 HITS.47962010._002669.pool.root.1
[2026-01-11 14:38:01] -rw-------. 1 boinc boinc      1017 Jan 11 14:35 memory_monitor_summary.json
[2026-01-11 14:38:01] -rw-------. 1 boinc boinc   1255453 Jan 11 14:35 log.47962010._002669.job.log.tgz.1
[2026-01-11 14:38:01] -rw-------. 1 boinc boinc        95 Jan 11 14:36 pilot_heartbeat.json
[2026-01-11 14:38:01] -rw-------. 1 boinc boinc      8584 Jan 11 14:37 heartbeat.json
[2026-01-11 14:38:01] -rw-r--r--. 1 boinc boinc      8192 Jan 11 14:37 boinc_mmap_file
[2026-01-11 14:38:01] -rw-r--r--. 1 boinc boinc        27 Jan 11 14:37 wrapper_checkpoint.txt
[2026-01-11 14:38:01] -rw-------. 1 boinc boinc      4884 Jan 11 14:37 pilotlog.txt
[2026-01-11 14:38:01] -rw-------. 1 boinc boinc   1129074 Jan 11 14:37 log.47962010._002669.job.log.1
[2026-01-11 14:38:01] -rw-------. 1 boinc boinc       353 Jan 11 14:38 output.list
[2026-01-11 14:38:01] -rw-r--r--. 1 boinc boinc       620 Jan 11 14:38 runtime_log
[2026-01-11 14:38:01] -rw-------. 1 boinc boinc   2406400 Jan 11 14:38 result.tar.gz
[2026-01-11 14:38:01] -rw-------. 1 boinc boinc       654 Jan 11 14:38 s8dMDm1Bxy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZvmKDmM8VVjn.diag
[2026-01-11 14:38:01] -rw-r--r--. 1 boinc boinc      8816 Jan 11 14:38 runtime_log.err
[2026-01-11 14:38:01] -rw-r--r--. 1 boinc boinc     21329 Jan 11 14:38 stderr.txt
[2026-01-11 14:38:01] HITS file was successfully produced:
[2026-01-11 14:38:01] -rw-------. 1 boinc boinc 41430076 Jan 11 14:34 shared/HITS.pool.root.1
[2026-01-11 14:38:01]  *** Contents of shared directory: ***
[2026-01-11 14:38:01] total 426396
[2026-01-11 14:38:01] -rw-r--r--. 2 boinc boinc 392179395 Jan 11 12:16 ATLAS.root_0
[2026-01-11 14:38:01] -rw-r--r--. 2 boinc boinc     15847 Jan 11 12:16 start_atlas.sh
[2026-01-11 14:38:01] -rw-r--r--. 2 boinc boinc    592621 Jan 11 12:16 input.tar.gz
[2026-01-11 14:38:01] -rw-------. 1 boinc boinc  41430076 Jan 11 14:34 HITS.pool.root.1
[2026-01-11 14:38:01] -rw-------. 1 boinc boinc   2406400 Jan 11 14:38 result.tar.gz
14:38:03 (8197): run_atlas exited; CPU time 18423.743597
14:38:03 (8197): called boinc_finish(0)

</stderr_txt>
]]>

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