Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:03:14 (1006745): wrapper (7.7.26015): starting
18:03:14 (1006745): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 18:03:14] Arguments: --nthreads 9
[2026-01-10 18:03:14] Threads: 9
[2026-01-10 18:03:14] Checking for CVMFS
[2026-01-10 18:03:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:03:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:03:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:03:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:03:14] 2.13.3.0 7542 24952 166704 154994 0 569 33793367 40960001 17484 16776704 0 40309887 99.787 24751155 44391 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 18:03:14] CVMFS is ok
[2026-01-10 18:03:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:03:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:03:14] Further information can be found at the LHC@home message board.
[2026-01-10 18:03:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:03:14] Checking for apptainer binary...
[2026-01-10 18:03:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:03:14] Running /usr/bin/apptainer --version
[2026-01-10 18:03:14] apptainer version 1.4.5-2.el9
[2026-01-10 18:03:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:03:15] c-212-6.aglt2.org
[2026-01-10 18:03:15] apptainer works
[2026-01-10 18:03:15] Set ATHENA_PROC_NUMBER=9
[2026-01-10 18:03:15] Set ATHENA_CORE_NUMBER=9
[2026-01-10 18:03:15] Starting ATLAS job with PandaID=6965803400
[2026-01-10 18:03:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:20:05 (1006745): BOINC client no longer exists - exiting
18:20:05 (1006745): timer handler: client dead, exiting
18:29:09 (1118734): wrapper (7.7.26015): starting
18:29:09 (1118734): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 18:29:09] Arguments: --nthreads 8
[2026-01-10 18:29:09] Threads: 8
[2026-01-10 18:29:09] This job has been restarted, cleaning up previous attempt
[2026-01-10 18:29:09] Checking for CVMFS
[2026-01-10 18:29:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:29:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:29:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:29:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:29:10] 2.13.3.0 7542 24978 156452 154997 2 405 33836378 40960001 17248 16776704 0 40484206 99.788 24753835 44389 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 18:29:10] CVMFS is ok
[2026-01-10 18:29:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:29:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:29:10] Further information can be found at the LHC@home message board.
[2026-01-10 18:29:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:29:10] Checking for apptainer binary...
[2026-01-10 18:29:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:29:10] Running /usr/bin/apptainer --version
[2026-01-10 18:29:10] apptainer version 1.4.5-2.el9
[2026-01-10 18:29:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:29:11] c-212-6.aglt2.org
[2026-01-10 18:29:11] apptainer works
[2026-01-10 18:29:11] Set ATHENA_PROC_NUMBER=8
[2026-01-10 18:29:11] Set ATHENA_CORE_NUMBER=8
[2026-01-10 18:29:11] Starting ATLAS job with PandaID=6965803400
[2026-01-10 18:29:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:45:48]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:45:48] 2026-01-11 00:44:40,231 | INFO     | time since job start (4508s) is within the limit (349056.0s)
[2026-01-10 19:45:48] 2026-01-11 00:44:40,659 | INFO     | monitor loop #301: job 0:6965803400 is in state 'finished'
[2026-01-10 19:45:48] 2026-01-11 00:44:40,660 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:45:48] 2026-01-11 00:44:42,237 | INFO     | time since job start (4510s) is within the limit (349056.0s)
[2026-01-10 19:45:48] 2026-01-11 00:44:43,165 | INFO     | monitor loop #302: job 0:6965803400 is in state 'finished'
[2026-01-10 19:45:48] 2026-01-11 00:44:43,165 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:45:48] 2026-01-11 00:44:44,244 | INFO     | time since job start (4512s) is within the limit (349056.0s)
[2026-01-10 19:45:48] 2026-01-11 00:44:45,670 | INFO     | monitor loop #303: job 0:6965803400 is in state 'finished'
[2026-01-10 19:45:48] 2026-01-11 00:44:45,674 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:45:48] 2026-01-11 00:44:46,251 | INFO     | time since job start (4514s) is within the limit (349056.0s)
[2026-01-10 19:45:48] 2026-01-11 00:44:48,184 | INFO     | monitor loop #304: job 0:6965803400 is in state 'finished'
[2026-01-10 19:45:48] 2026-01-11 00:44:48,184 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:45:48] 2026-01-11 00:44:48,258 | INFO     | time since job start (4516s) is within the limit (349056.0s)
[2026-01-10 19:45:48] 2026-01-11 00:44:50,264 | INFO     | time since job start (4518s) is within the limit (349056.0s)
[2026-01-10 19:45:48] 2026-01-11 00:44:50,714 | INFO     | monitor loop #305: job 0:6965803400 is in state 'finished'
[2026-01-10 19:45:48] 2026-01-11 00:44:50,720 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:45:48] 2026-01-11 00:44:52,271 | INFO     | time since job start (4520s) is within the limit (349056.0s)
[2026-01-10 19:45:48] 2026-01-11 00:44:53,225 | INFO     | monitor loop #306: job 0:6965803400 is in state 'finished'
[2026-01-10 19:45:48] 2026-01-11 00:44:53,225 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:45:48] 2026-01-11 00:44:54,278 | INFO     | time since job start (4522s) is within the limit (349056.0s)
[2026-01-10 19:45:48] 2026-01-11 00:44:55,730 | INFO     | monitor loop #307: job 0:6965803400 is in state 'finished'
[2026-01-10 19:45:48] 2026-01-11 00:44:55,734 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:45:48] 2026-01-11 00:44:56,286 | INFO     | time since job start (4524s) is within the limit (349056.0s)
[2026-01-10 19:45:48] 2026-01-11 00:44:56,286 | INFO     | 4525s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-10 19:45:48] 2026-01-11 00:44:58,245 | INFO     | monitor loop #308: job 0:6965803400 is in state 'finished'
[2026-01-10 19:45:48] 2026-01-11 00:44:58,245 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:45:48] 2026-01-11 00:44:59,005 | INFO     | PID=1130346 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:45:48] 2026-01-11 00:44:59,005 | INFO     | .. there are 14 such processes running
[2026-01-10 19:45:48] 2026-01-11 00:45:00,006 | INFO     | time since job start (4528s) is within the limit (349056.0s)
[2026-01-10 19:45:48] 2026-01-11 00:45:00,750 | INFO     | monitor loop #309: job 0:6965803400 is in state 'finished'
[2026-01-10 19:45:48] 2026-01-11 00:45:00,756 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:45:48] 2026-01-11 00:45:02,029 | INFO     | time since job start (4530s) is within the limit (349056.0s)
[2026-01-10 19:45:48] 2026-01-11 00:45:03,261 | INFO     | monitor loop #310: job 0:6965803400 is in state 'finished'
[2026-01-10 19:45:48] 2026-01-11 00:45:03,261 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:45:48] 2026-01-11 00:45:04,043 | INFO     | time since job start (4532s) is within the limit (349056.0s)
[2026-01-10 19:45:48] 2026-01-11 00:45:05,766 | INFO     | monitor loop #311: job 0:6965803400 is in state 'finished'
[2026-01-10 19:45:48] 2026-01-11 00:45:05,770 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:45:48] 2026-01-11 00:45:06,050 | INFO     | time since job start (4534s) is within the limit (349056.0s)
[2026-01-10 19:45:48] 2026-01-11 00:45:06,798 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 19:45:48] 2026-01-11 00:45:06,819 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3082.2921145833316
[2026-01-10 19:45:48] 2026-01-11 00:45:06,912 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965803400/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:45:48] 2026-01-11 00:45:06,919 | INFO     | extracted standard info from prmon json
[2026-01-10 19:45:48] 2026-01-11 00:45:06,919 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:45:48] 2026-01-11 00:45:06,919 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:45:48] 2026-01-11 00:45:06,921 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:45:48] 2026-01-11 00:45:06,921 | INFO     | sum of square deviations: 89103629.0303032
[2026-01-10 19:45:48] 2026-01-11 00:45:06,922 | INFO     | sum of deviations: -17773205048.181816
[2026-01-10 19:45:48] 2026-01-11 00:45:06,922 | INFO     | mean x: 1768090108.2121212
[2026-01-10 19:45:48] 2026-01-11 00:45:06,922 | INFO     | mean y: 2408888.727272727
[2026-01-10 19:45:48] 2026-01-11 00:45:06,922 | INFO     | intersect: 352677472507.39124
[2026-01-10 19:45:48] 2026-01-11 00:45:06,922 | INFO     | chi2: 4.057016791277298
[2026-01-10 19:45:48] 2026-01-11 00:45:06,922 | INFO     | current memory leak: -199.47 B/s (using 66 data points, chi2=4.06)
[2026-01-10 19:45:48] 2026-01-11 00:45:06,922 | INFO     | could have reported an average CPU frequency of 3146 MHz (6 samples)
[2026-01-10 19:45:48] 2026-01-11 00:45:06,923 | INFO     | ..............................
[2026-01-10 19:45:48] 2026-01-11 00:45:06,923 | INFO     | . Timing measurements:
[2026-01-10 19:45:48] 2026-01-11 00:45:06,927 | INFO     | . get job = 0 s
[2026-01-10 19:45:48] 2026-01-11 00:45:06,927 | INFO     | . initial setup = 1 s
[2026-01-10 19:45:48] 2026-01-11 00:45:06,927 | INFO     | . payload setup = 11 s
[2026-01-10 19:45:48] 2026-01-11 00:45:06,927 | INFO     | . stage-in = 0 s
[2026-01-10 19:45:48] 2026-01-11 00:45:06,927 | INFO     | . payload execution = 4463 s
[2026-01-10 19:45:48] 2026-01-11 00:45:06,927 | INFO     | . stage-out = 1 s
[2026-01-10 19:45:48] 2026-01-11 00:45:06,927 | INFO     | . log creation = 0 s
[2026-01-10 19:45:48] 2026-01-11 00:45:06,927 | INFO     | ..............................
[2026-01-10 19:45:48] 2026-01-11 00:45:07,381 | INFO     | 
[2026-01-10 19:45:48] 2026-01-11 00:45:07,382 | INFO     | job summary report
[2026-01-10 19:45:48] 2026-01-11 00:45:07,382 | INFO     | --------------------------------------------------
[2026-01-10 19:45:48] 2026-01-11 00:45:07,382 | INFO     | PanDA job id: 6965803400
[2026-01-10 19:45:48] 2026-01-11 00:45:07,382 | INFO     | task id: 47962010
[2026-01-10 19:45:48] 2026-01-11 00:45:07,383 | INFO     | errors: (none)
[2026-01-10 19:45:48] 2026-01-11 00:45:07,383 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:45:48] 2026-01-11 00:45:07,383 | INFO     | pilot state: finished 
[2026-01-10 19:45:48] 2026-01-11 00:45:07,383 | INFO     | transexitcode: 0
[2026-01-10 19:45:48] 2026-01-11 00:45:07,383 | INFO     | exeerrorcode: 0
[2026-01-10 19:45:48] 2026-01-11 00:45:07,383 | INFO     | exeerrordiag: 
[2026-01-10 19:45:48] 2026-01-11 00:45:07,383 | INFO     | exitcode: 0
[2026-01-10 19:45:48] 2026-01-11 00:45:07,383 | INFO     | exitmsg: OK
[2026-01-10 19:45:48] 2026-01-11 00:45:07,383 | INFO     | cpuconsumptiontime: 12947 s
[2026-01-10 19:45:48] 2026-01-11 00:45:07,383 | INFO     | nevents: 50
[2026-01-10 19:45:48] 2026-01-11 00:45:07,383 | INFO     | neventsw: 0
[2026-01-10 19:45:48] 2026-01-11 00:45:07,383 | INFO     | pid: 1150299
[2026-01-10 19:45:48] 2026-01-11 00:45:07,383 | INFO     | pgrp: 1150299
[2026-01-10 19:45:48] 2026-01-11 00:45:07,384 | INFO     | corecount: 8
[2026-01-10 19:45:48] 2026-01-11 00:45:07,384 | INFO     | event service: False
[2026-01-10 19:45:48] 2026-01-11 00:45:07,384 | INFO     | sizes: {0: 2284400, 1: 2284599, 11: 2284861, 12: 2284889, 4479: 2311857, 4481: 2320851, 4484: 2321035, 4515: 2321281}
[2026-01-10 19:45:48] 2026-01-11 00:45:07,384 | INFO     | --------------------------------------------------
[2026-01-10 19:45:48] 2026-01-11 00:45:07,384 | INFO     | 
[2026-01-10 19:45:48] 2026-01-11 00:45:07,384 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 19:45:48] 2026-01-11 00:45:07,675 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:45:48] 2026-01-11 00:45:07,676 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:45:48] 2026-01-11 00:45:07,676 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:45:48] 2026-01-11 00:45:07,676 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:45:48] 2026-01-11 00:45:07,676 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:45:48] 2026-01-11 00:45:07,676 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:45:48] 2026-01-11 00:45:07,676 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:45:48] 2026-01-11 00:45:07,676 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:45:48] 2026-01-11 00:45:07,676 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:45:48] 2026-01-11 00:45:07,676 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:45:48] 2026-01-11 00:45:07,676 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:45:48] 2026-01-11 00:45:07,676 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:45:48] 2026-01-11 00:45:07,676 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:45:48] 2026-01-11 00:45:07,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:45:48] 2026-01-11 00:45:07,676 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:45:48] 2026-01-11 00:45:07,676 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:45:48] 2026-01-11 00:45:07,676 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:45:48] 2026-01-11 00:45:07,677 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:45:48] 2026-01-11 00:45:07,677 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:45:48] 2026-01-11 00:45:07,677 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:45:48] 2026-01-11 00:45:07,677 | INFO     | job 6965803400 has completed (purged errors)
[2026-01-10 19:45:48] 2026-01-11 00:45:07,677 | INFO     | overall cleanup function is called
[2026-01-10 19:45:48] 2026-01-11 00:45:08,732 | INFO     | --- collectZombieJob: --- 10, [1150299]
[2026-01-10 19:45:48] 2026-01-11 00:45:08,732 | INFO     | zombie collector waiting for pid 1150299
[2026-01-10 19:45:48] 2026-01-11 00:45:08,732 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:45:48] 2026-01-11 00:45:08,732 | INFO     | collected zombie processes
[2026-01-10 19:45:48] 2026-01-11 00:45:08,732 | INFO     | will attempt to kill all subprocesses of pid=1150299
[2026-01-10 19:45:48] 2026-01-11 00:45:09,725 | INFO     | process IDs to be killed: [1150299] (in reverse order)
[2026-01-10 19:45:48] 2026-01-11 00:45:09,916 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:45:48] 2026-01-11 00:45:09,916 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:45:48] 2026-01-11 00:45:09,947 | INFO     | did not find any defunct processes belonging to 1150299
[2026-01-10 19:45:48] 2026-01-11 00:45:09,967 | INFO     | did not find any defunct processes belonging to 1150299
[2026-01-10 19:45:48] 2026-01-11 00:45:09,968 | INFO     | ready for new job
[2026-01-10 19:45:48] 2026-01-11 00:45:09,968 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:45:48] 2026-01-11 00:45:09,987 | INFO     | ***************************************
[2026-01-10 19:45:48] 2026-01-11 00:45:09,987 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:45:48] 2026-01-11 00:45:09,987 | INFO     | ***************************************
[2026-01-10 19:45:48] 2026-01-11 00:45:09,987 | INFO     | 
[2026-01-10 19:45:48] 2026-01-11 00:45:10,012 | INFO     | architecture information:
[2026-01-10 19:45:48] 2026-01-11 00:45:10,023 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:45:48] 2026-01-11 00:45:10,115 | INFO     | cat /etc/os-release:
[2026-01-10 19:45:48] NAME="CentOS Linux"
[2026-01-10 19:45:48] VERSION="7 (Core)"
[2026-01-10 19:45:48] ID="centos"
[2026-01-10 19:45:48] ID_LIKE="rhel fedora"
[2026-01-10 19:45:48] VERSION_ID="7"
[2026-01-10 19:45:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:45:48] ANSI_COLOR="0;31"
[2026-01-10 19:45:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:45:48] HOME_URL="https://www.centos.org/"
[2026-01-10 19:45:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:45:48] 
[2026-01-10 19:45:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:45:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:45:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:45:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:45:48] 
[2026-01-10 19:45:48] 2026-01-11 00:45:10,116 | INFO     | ***************************************
[2026-01-10 19:45:48] 2026-01-11 00:45:10,620 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 19:45:48] 2026-01-11 00:45:10,684 | INFO     | sufficient remaining disk space (128785055744 B)
[2026-01-10 19:45:48] 2026-01-11 00:45:10,684 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:45:48] 2026-01-11 00:45:10,685 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:45:48] 2026-01-11 00:45:10,685 | INFO     | update_server=False
[2026-01-10 19:45:48] 2026-01-11 00:45:10,685 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:45:48] 2026-01-11 00:45:10,686 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:45:48] 2026-01-11 00:45:10,760 | INFO     | all job control threads have been joined
[2026-01-10 19:45:48] 2026-01-11 00:45:10,800 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 19:45:48] 2026-01-11 00:45:10,800 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 19:45:48] 2026-01-11 00:45:10,803 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:45:48] 2026-01-11 00:45:10,803 | INFO     | will abort loop
[2026-01-10 19:45:48] 2026-01-11 00:45:11,569 | INFO     | all data control threads have been joined
[2026-01-10 19:45:48] 2026-01-11 00:45:11,691 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:45:48] 2026-01-11 00:45:11,707 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:45:48] 2026-01-11 00:45:11,749 | INFO     | all payload control threads have been joined
[2026-01-10 19:45:48] 2026-01-11 00:45:11,766 | INFO     | [job] control thread has finished
[2026-01-10 19:45:48] 2026-01-11 00:45:11,809 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:45:48] 2026-01-11 00:45:11,844 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:45:48] 2026-01-11 00:45:11,870 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:45:48] 2026-01-11 00:45:11,984 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:45:48] 2026-01-11 00:45:12,111 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:45:48] 2026-01-11 00:45:12,366 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:45:48] 2026-01-11 00:45:12,385 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:45:48] 2026-01-11 00:45:12,575 | INFO     | [data] control thread has finished
[2026-01-10 19:45:48] 2026-01-11 00:45:12,755 | INFO     | [payload] control thread has finished
[2026-01-10 19:45:48] 2026-01-11 00:45:12,781 | INFO     | [job] validate thread has finished
[2026-01-10 19:45:48] 2026-01-11 00:45:12,807 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:45:48] 2026-01-11 00:45:12,932 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:45:48] 2026-01-11 00:45:13,391 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:45:48] 2026-01-11 00:45:14,118 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:45:48] 2026-01-11 00:45:14,697 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:45:48] 2026-01-11 00:45:39,734 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:45:48] 2026-01-11 00:45:40,605 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140019383023424)>', '<ExcThread(monitor, started 140018752419584)>']
[2026-01-10 19:45:48] 2026-01-11 00:45:41,407 | INFO     | PID=1130346 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:45:48] 2026-01-11 00:45:41,408 | INFO     | .. there are 14 such processes running
[2026-01-10 19:45:48] 2026-01-11 00:45:41,408 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:45:48] 2026-01-11 00:45:41,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:45:48] 2026-01-11 00:45:41,408 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:45:48] 2026-01-11 00:45:41,408 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:45:48] 2026-01-11 00:45:41,408 | INFO     | [monitor] control thread has ended
[2026-01-10 19:45:48] 2026-01-11 00:45:45,632 | INFO     | all workflow threads have been joined
[2026-01-10 19:45:48] 2026-01-11 00:45:45,632 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:45:48] 2026-01-11 00:45:45,633 | INFO     | traces error code: 0
[2026-01-10 19:45:48] 2026-01-11 00:45:45,633 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:45:48] 2026-01-11 00:45:46,480 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:45:48] 2026-01-11 00:45:46,510 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:45:48] 2026-01-11 00:45:46,567 [wrapper] pilotpid: 1130346
[2026-01-10 19:45:48] 2026-01-11 00:45:46,610 [wrapper] Pilot exit status: 0
[2026-01-10 19:45:48] 2026-01-11 00:45:46,831 [wrapper] pandaids: 6965803400 6965803400
[2026-01-10 19:45:48] 2026-01-11 00:45:47,405 [wrapper] cleanup supervisor_pilot 1284119 1130347
[2026-01-10 19:45:48] 2026-01-11 00:45:47,426 [wrapper] Test setup, not cleaning
[2026-01-10 19:45:48] 2026-01-11 00:45:47,457 [wrapper] apfmon messages muted
[2026-01-10 19:45:48] 2026-01-11 00:45:47,475 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:45:48] 2026-01-11 00:45:47,510 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:45:48]  *** Error codes and diagnostics ***
[2026-01-10 19:45:48]     "exeErrorCode": 0,
[2026-01-10 19:45:48]     "exeErrorDiag": "",
[2026-01-10 19:45:48]     "pilotErrorCode": 0,
[2026-01-10 19:45:48]     "pilotErrorDiag": "",
[2026-01-10 19:45:48]  *** Listing of results directory ***
[2026-01-10 19:45:48] total 816620
[2026-01-10 19:45:48] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-10 19:45:48] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 19:45:48] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:01 queuedata.json
[2026-01-10 19:45:48] -rwx------. 1 boincer umatlas     36322 Jan 10 18:02 runpilot2-wrapper.sh
[2026-01-10 19:45:48] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:45:48] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:03 run_atlas
[2026-01-10 19:45:48] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:03 job.xml
[2026-01-10 19:45:48] -rw-r--r--. 3 boincer umatlas 392167382 Jan 10 18:03 EVNT.47962006._000121.pool.root.1
[2026-01-10 19:45:48] -rw-r--r--. 3 boincer umatlas 392167382 Jan 10 18:03 ATLAS.root_0
[2026-01-10 19:45:48] -rw-r--r--. 2 boincer umatlas    592608 Jan 10 18:03 input.tar.gz
[2026-01-10 19:45:48] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:03 start_atlas.sh
[2026-01-10 19:45:48] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:03 shared
[2026-01-10 19:45:48] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:03 boinc_lockfile
[2026-01-10 19:45:48] -rw-------. 1 boincer umatlas   1516240 Jan 10 18:03 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:45:48] -rw-r--r--. 1 boincer umatlas      2891 Jan 10 18:29 pandaJob.out
[2026-01-10 19:45:48] -rw-------. 1 boincer umatlas        57 Jan 10 18:29 setup.sh.local
[2026-01-10 19:45:48] -rw-------. 1 boincer umatlas    989548 Jan 10 18:29 agis_schedconf.cvmfs.json
[2026-01-10 19:45:48] -rw-r--r--. 1 boincer umatlas       531 Jan 10 19:32 boinc_task_state.xml
[2026-01-10 19:45:48] -rw-r--r--. 1 boincer umatlas      6956 Jan 10 19:37 init_data.xml
[2026-01-10 19:45:48] -rw-------. 1 boincer umatlas  44271394 Jan 10 19:44 HITS.47962010._002852.pool.root.1
[2026-01-10 19:45:48] -rw-------. 1 boincer umatlas      1039 Jan 10 19:44 memory_monitor_summary.json
[2026-01-10 19:45:48] -rw-------. 1 boincer umatlas   1194461 Jan 10 19:44 log.47962010._002852.job.log.tgz.1
[2026-01-10 19:45:48] -rw-------. 1 boincer umatlas        96 Jan 10 19:44 pilot_heartbeat.json
[2026-01-10 19:45:48] -rw-------. 1 boincer umatlas      8543 Jan 10 19:45 heartbeat.json
[2026-01-10 19:45:48] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 19:45 boinc_mmap_file
[2026-01-10 19:45:48] -rw-r--r--. 1 boincer umatlas        27 Jan 10 19:45 wrapper_checkpoint.txt
[2026-01-10 19:45:48] -rw-------. 1 boincer umatlas      5011 Jan 10 19:45 pilotlog.txt
[2026-01-10 19:45:48] -rw-------. 1 boincer umatlas    649773 Jan 10 19:45 log.47962010._002852.job.log.1
[2026-01-10 19:45:48] -rw-------. 1 boincer umatlas       353 Jan 10 19:45 output.list
[2026-01-10 19:45:48] -rw-r--r--. 1 boincer umatlas       620 Jan 10 19:45 runtime_log
[2026-01-10 19:45:48] -rw-------. 1 boincer umatlas   1863680 Jan 10 19:45 result.tar.gz
[2026-01-10 19:45:48] -rw-------. 1 boincer umatlas       779 Jan 10 19:45 x6NODmD9wy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjdhKDmITDgpn.diag
[2026-01-10 19:45:48] -rw-r--r--. 1 boincer umatlas      9422 Jan 10 19:45 runtime_log.err
[2026-01-10 19:45:48] -rw-r--r--. 1 boincer umatlas     24714 Jan 10 19:45 stderr.txt
[2026-01-10 19:45:48] HITS file was successfully produced:
[2026-01-10 19:45:48] -rw-------. 1 boincer umatlas 44271394 Jan 10 19:44 shared/HITS.pool.root.1
[2026-01-10 19:45:48]  *** Contents of shared directory: ***
[2026-01-10 19:45:48] total 428632
[2026-01-10 19:45:48] -rw-r--r--. 3 boincer umatlas 392167382 Jan 10 18:03 ATLAS.root_0
[2026-01-10 19:45:48] -rw-r--r--. 2 boincer umatlas    592608 Jan 10 18:03 input.tar.gz
[2026-01-10 19:45:48] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:03 start_atlas.sh
[2026-01-10 19:45:48] -rw-------. 1 boincer umatlas  44271394 Jan 10 19:44 HITS.pool.root.1
[2026-01-10 19:45:48] -rw-------. 1 boincer umatlas   1863680 Jan 10 19:45 result.tar.gz
19:45:50 (1118734): run_atlas exited; CPU time 12975.592797
19:45:50 (1118734): called boinc_finish(0)

</stderr_txt>
]]>

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