Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:02:52 (1001007): wrapper (7.7.26015): starting
18:02:52 (1001007): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 18:02:52] Arguments: --nthreads 9
[2026-01-10 18:02:52] Threads: 9
[2026-01-10 18:02:52] Checking for CVMFS
[2026-01-10 18:02:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:02:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:02:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:02:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:02:53] 2.13.3.0 7542 24952 166604 154994 0 566 33793152 40960001 17355 16776704 0 40294290 99.787 24751155 44391 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 18:02:53] CVMFS is ok
[2026-01-10 18:02:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:02:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:02:53] Further information can be found at the LHC@home message board.
[2026-01-10 18:02:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:02:53] Checking for apptainer binary...
[2026-01-10 18:02:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:02:53] Running /usr/bin/apptainer --version
[2026-01-10 18:02:53] apptainer version 1.4.5-2.el9
[2026-01-10 18:02:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:02:53] c-212-6.aglt2.org
[2026-01-10 18:02:53] apptainer works
[2026-01-10 18:02:53] Set ATHENA_PROC_NUMBER=9
[2026-01-10 18:02:53] Set ATHENA_CORE_NUMBER=9
[2026-01-10 18:02:53] Starting ATLAS job with PandaID=6965803380
[2026-01-10 18:02:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:29:09 (1118732): wrapper (7.7.26015): starting
18:29:09 (1118732): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 18:29:09] Arguments: --nthreads 8
[2026-01-10 18:29:09] Threads: 8
[2026-01-10 18:29:09] This job has been restarted, cleaning up previous attempt
[2026-01-10 18:29:09] Checking for CVMFS
[2026-01-10 18:29:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:29:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:29:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:29:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:29:10] 2.13.3.0 7542 24978 156456 154997 2 405 33836378 40960001 17248 16776704 0 40484206 99.788 24753835 44389 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 18:29:10] CVMFS is ok
[2026-01-10 18:29:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:29:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:29:10] Further information can be found at the LHC@home message board.
[2026-01-10 18:29:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:29:10] Checking for apptainer binary...
[2026-01-10 18:29:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:29:10] Running /usr/bin/apptainer --version
[2026-01-10 18:29:11] apptainer version 1.4.5-2.el9
[2026-01-10 18:29:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:29:11] c-212-6.aglt2.org
[2026-01-10 18:29:11] apptainer works
[2026-01-10 18:29:11] Set ATHENA_PROC_NUMBER=8
[2026-01-10 18:29:11] Set ATHENA_CORE_NUMBER=8
[2026-01-10 18:29:11] Starting ATLAS job with PandaID=6965803380
[2026-01-10 18:29:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:14:44]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:14:44] 2026-01-11 00:13:35,659 | INFO     | time since job start (2643s) is within the limit (349056.0s)
[2026-01-10 19:14:44] 2026-01-11 00:13:35,901 | INFO     | monitor loop #184: job 0:6965803380 is in state 'finished'
[2026-01-10 19:14:44] 2026-01-11 00:13:35,901 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:14:44] 2026-01-11 00:13:37,689 | INFO     | time since job start (2645s) is within the limit (349056.0s)
[2026-01-10 19:14:44] 2026-01-11 00:13:38,406 | INFO     | monitor loop #185: job 0:6965803380 is in state 'finished'
[2026-01-10 19:14:44] 2026-01-11 00:13:38,406 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:14:44] 2026-01-11 00:13:39,696 | INFO     | time since job start (2647s) is within the limit (349056.0s)
[2026-01-10 19:14:44] 2026-01-11 00:13:40,911 | INFO     | monitor loop #186: job 0:6965803380 is in state 'finished'
[2026-01-10 19:14:44] 2026-01-11 00:13:40,911 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:14:44] 2026-01-11 00:13:41,703 | INFO     | time since job start (2649s) is within the limit (349056.0s)
[2026-01-10 19:14:44] 2026-01-11 00:13:43,431 | INFO     | monitor loop #187: job 0:6965803380 is in state 'finished'
[2026-01-10 19:14:44] 2026-01-11 00:13:43,431 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:14:44] 2026-01-11 00:13:43,714 | INFO     | time since job start (2651s) is within the limit (349056.0s)
[2026-01-10 19:14:44] 2026-01-11 00:13:45,721 | INFO     | time since job start (2653s) is within the limit (349056.0s)
[2026-01-10 19:14:44] 2026-01-11 00:13:45,936 | INFO     | monitor loop #188: job 0:6965803380 is in state 'finished'
[2026-01-10 19:14:44] 2026-01-11 00:13:45,936 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:14:44] 2026-01-11 00:13:47,741 | INFO     | time since job start (2655s) is within the limit (349056.0s)
[2026-01-10 19:14:44] 2026-01-11 00:13:48,453 | INFO     | monitor loop #189: job 0:6965803380 is in state 'finished'
[2026-01-10 19:14:44] 2026-01-11 00:13:48,453 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:14:44] 2026-01-11 00:13:49,748 | INFO     | time since job start (2657s) is within the limit (349056.0s)
[2026-01-10 19:14:44] 2026-01-11 00:13:50,958 | INFO     | monitor loop #190: job 0:6965803380 is in state 'finished'
[2026-01-10 19:14:44] 2026-01-11 00:13:50,958 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:14:44] 2026-01-11 00:13:53,376 | INFO     | PID=1130320 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:14:44] 2026-01-11 00:13:53,377 | INFO     | .. there are 15 such processes running
[2026-01-10 19:14:44] 2026-01-11 00:13:53,468 | INFO     | monitor loop #191: job 0:6965803380 is in state 'finished'
[2026-01-10 19:14:44] 2026-01-11 00:13:53,468 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:14:44] 2026-01-11 00:13:54,380 | INFO     | time since job start (2662s) is within the limit (349056.0s)
[2026-01-10 19:14:44] 2026-01-11 00:13:55,973 | INFO     | monitor loop #192: job 0:6965803380 is in state 'finished'
[2026-01-10 19:14:44] 2026-01-11 00:13:55,977 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:14:44] 2026-01-11 00:13:56,387 | INFO     | time since job start (2664s) is within the limit (349056.0s)
[2026-01-10 19:14:44] 2026-01-11 00:13:58,396 | INFO     | time since job start (2666s) is within the limit (349056.0s)
[2026-01-10 19:14:44] 2026-01-11 00:13:58,498 | INFO     | monitor loop #193: job 0:6965803380 is in state 'finished'
[2026-01-10 19:14:44] 2026-01-11 00:13:58,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:14:44] 2026-01-11 00:14:00,410 | INFO     | time since job start (2668s) is within the limit (349056.0s)
[2026-01-10 19:14:44] 2026-01-11 00:14:01,003 | INFO     | monitor loop #194: job 0:6965803380 is in state 'finished'
[2026-01-10 19:14:44] 2026-01-11 00:14:01,007 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:14:44] 2026-01-11 00:14:02,417 | INFO     | time since job start (2670s) is within the limit (349056.0s)
[2026-01-10 19:14:44] 2026-01-11 00:14:03,536 | INFO     | monitor loop #195: job 0:6965803380 is in state 'finished'
[2026-01-10 19:14:44] 2026-01-11 00:14:03,536 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:14:44] 2026-01-11 00:14:03,782 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 19:14:44] 2026-01-11 00:14:03,814 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3202.0637395833346
[2026-01-10 19:14:44] 2026-01-11 00:14:03,835 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965803380/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:14:44] 2026-01-11 00:14:03,836 | INFO     | extracted standard info from prmon json
[2026-01-10 19:14:44] 2026-01-11 00:14:03,836 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:14:44] 2026-01-11 00:14:03,836 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:14:44] 2026-01-11 00:14:03,838 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:14:44] 2026-01-11 00:14:03,839 | INFO     | sum of square deviations: 14423268.749999994
[2026-01-10 19:14:44] 2026-01-11 00:14:03,843 | INFO     | sum of deviations: -10051132703.083334
[2026-01-10 19:14:44] 2026-01-11 00:14:03,844 | INFO     | mean x: 1768089191.9166667
[2026-01-10 19:14:44] 2026-01-11 00:14:03,846 | INFO     | mean y: 2270995.972222222
[2026-01-10 19:14:44] 2026-01-11 00:14:03,847 | INFO     | intersect: 1232129287893.0125
[2026-01-10 19:14:44] 2026-01-11 00:14:03,848 | INFO     | chi2: 4.261481598424107
[2026-01-10 19:14:44] 2026-01-11 00:14:03,850 | INFO     | current memory leak: -696.87 B/s (using 36 data points, chi2=4.26)
[2026-01-10 19:14:44] 2026-01-11 00:14:03,855 | INFO     | could have reported an average CPU frequency of 3174 MHz (5 samples)
[2026-01-10 19:14:44] 2026-01-11 00:14:03,855 | INFO     | ..............................
[2026-01-10 19:14:44] 2026-01-11 00:14:03,855 | INFO     | . Timing measurements:
[2026-01-10 19:14:44] 2026-01-11 00:14:03,855 | INFO     | . get job = 0 s
[2026-01-10 19:14:44] 2026-01-11 00:14:03,855 | INFO     | . initial setup = 1 s
[2026-01-10 19:14:44] 2026-01-11 00:14:03,859 | INFO     | . payload setup = 11 s
[2026-01-10 19:14:44] 2026-01-11 00:14:03,859 | INFO     | . stage-in = 0 s
[2026-01-10 19:14:44] 2026-01-11 00:14:03,859 | INFO     | . payload execution = 2591 s
[2026-01-10 19:14:44] 2026-01-11 00:14:03,859 | INFO     | . stage-out = 2 s
[2026-01-10 19:14:44] 2026-01-11 00:14:03,859 | INFO     | . log creation = 0 s
[2026-01-10 19:14:44] 2026-01-11 00:14:03,859 | INFO     | ..............................
[2026-01-10 19:14:44] 2026-01-11 00:14:04,108 | INFO     | 
[2026-01-10 19:14:44] 2026-01-11 00:14:04,108 | INFO     | job summary report
[2026-01-10 19:14:44] 2026-01-11 00:14:04,108 | INFO     | --------------------------------------------------
[2026-01-10 19:14:44] 2026-01-11 00:14:04,108 | INFO     | PanDA job id: 6965803380
[2026-01-10 19:14:44] 2026-01-11 00:14:04,109 | INFO     | task id: 47962010
[2026-01-10 19:14:44] 2026-01-11 00:14:04,109 | INFO     | errors: (none)
[2026-01-10 19:14:44] 2026-01-11 00:14:04,109 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:14:44] 2026-01-11 00:14:04,109 | INFO     | pilot state: finished 
[2026-01-10 19:14:44] 2026-01-11 00:14:04,109 | INFO     | transexitcode: 0
[2026-01-10 19:14:44] 2026-01-11 00:14:04,109 | INFO     | exeerrorcode: 0
[2026-01-10 19:14:44] 2026-01-11 00:14:04,109 | INFO     | exeerrordiag: 
[2026-01-10 19:14:44] 2026-01-11 00:14:04,109 | INFO     | exitcode: 0
[2026-01-10 19:14:44] 2026-01-11 00:14:04,109 | INFO     | exitmsg: OK
[2026-01-10 19:14:44] 2026-01-11 00:14:04,109 | INFO     | cpuconsumptiontime: 11608 s
[2026-01-10 19:14:44] 2026-01-11 00:14:04,109 | INFO     | nevents: 50
[2026-01-10 19:14:44] 2026-01-11 00:14:04,109 | INFO     | neventsw: 0
[2026-01-10 19:14:44] 2026-01-11 00:14:04,109 | INFO     | pid: 1150754
[2026-01-10 19:14:44] 2026-01-11 00:14:04,110 | INFO     | pgrp: 1150754
[2026-01-10 19:14:44] 2026-01-11 00:14:04,110 | INFO     | corecount: 8
[2026-01-10 19:14:44] 2026-01-11 00:14:04,110 | INFO     | event service: False
[2026-01-10 19:14:44] 2026-01-11 00:14:04,110 | INFO     | sizes: {0: 2284396, 1: 2284595, 10: 2284857, 12: 2284885, 2608: 2309643, 2612: 2318637, 2615: 2318821, 2651: 2319099}
[2026-01-10 19:14:44] 2026-01-11 00:14:04,110 | INFO     | --------------------------------------------------
[2026-01-10 19:14:44] 2026-01-11 00:14:04,110 | INFO     | 
[2026-01-10 19:14:44] 2026-01-11 00:14:04,110 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 19:14:44] 2026-01-11 00:14:04,309 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:14:44] 2026-01-11 00:14:04,310 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:14:44] 2026-01-11 00:14:04,310 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:14:44] 2026-01-11 00:14:04,310 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:14:44] 2026-01-11 00:14:04,310 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:14:44] 2026-01-11 00:14:04,310 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:14:44] 2026-01-11 00:14:04,310 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:14:44] 2026-01-11 00:14:04,310 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:14:44] 2026-01-11 00:14:04,310 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:14:44] 2026-01-11 00:14:04,310 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:14:44] 2026-01-11 00:14:04,311 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:14:44] 2026-01-11 00:14:04,311 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:14:44] 2026-01-11 00:14:04,311 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:14:44] 2026-01-11 00:14:04,311 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:14:44] 2026-01-11 00:14:04,311 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:14:44] 2026-01-11 00:14:04,311 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:14:44] 2026-01-11 00:14:04,311 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:14:44] 2026-01-11 00:14:04,311 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:14:44] 2026-01-11 00:14:04,311 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:14:44] 2026-01-11 00:14:04,311 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:14:44] 2026-01-11 00:14:04,311 | INFO     | job 6965803380 has completed (purged errors)
[2026-01-10 19:14:44] 2026-01-11 00:14:04,312 | INFO     | overall cleanup function is called
[2026-01-10 19:14:44] 2026-01-11 00:14:05,387 | INFO     | --- collectZombieJob: --- 10, [1150754]
[2026-01-10 19:14:44] 2026-01-11 00:14:05,387 | INFO     | zombie collector waiting for pid 1150754
[2026-01-10 19:14:44] 2026-01-11 00:14:05,387 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:14:44] 2026-01-11 00:14:05,387 | INFO     | collected zombie processes
[2026-01-10 19:14:44] 2026-01-11 00:14:05,387 | INFO     | will attempt to kill all subprocesses of pid=1150754
[2026-01-10 19:14:44] 2026-01-11 00:14:06,760 | INFO     | process IDs to be killed: [1150754] (in reverse order)
[2026-01-10 19:14:44] 2026-01-11 00:14:07,853 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:14:44] 2026-01-11 00:14:07,853 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:14:44] 2026-01-11 00:14:07,935 | INFO     | did not find any defunct processes belonging to 1150754
[2026-01-10 19:14:44] 2026-01-11 00:14:08,017 | INFO     | did not find any defunct processes belonging to 1150754
[2026-01-10 19:14:44] 2026-01-11 00:14:08,017 | INFO     | ready for new job
[2026-01-10 19:14:44] 2026-01-11 00:14:08,018 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:14:44] 2026-01-11 00:14:08,020 | INFO     | ***************************************
[2026-01-10 19:14:44] 2026-01-11 00:14:08,020 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:14:44] 2026-01-11 00:14:08,020 | INFO     | ***************************************
[2026-01-10 19:14:44] 2026-01-11 00:14:08,020 | INFO     | 
[2026-01-10 19:14:44] 2026-01-11 00:14:08,029 | INFO     | architecture information:
[2026-01-10 19:14:44] 2026-01-11 00:14:08,051 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:14:44] 2026-01-11 00:14:08,133 | INFO     | cat /etc/os-release:
[2026-01-10 19:14:44] NAME="CentOS Linux"
[2026-01-10 19:14:44] VERSION="7 (Core)"
[2026-01-10 19:14:44] ID="centos"
[2026-01-10 19:14:44] ID_LIKE="rhel fedora"
[2026-01-10 19:14:44] VERSION_ID="7"
[2026-01-10 19:14:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:14:44] ANSI_COLOR="0;31"
[2026-01-10 19:14:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:14:44] HOME_URL="https://www.centos.org/"
[2026-01-10 19:14:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:14:44] 
[2026-01-10 19:14:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:14:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:14:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:14:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:14:44] 
[2026-01-10 19:14:44] 2026-01-11 00:14:08,134 | INFO     | ***************************************
[2026-01-10 19:14:44] 2026-01-11 00:14:08,658 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 19:14:44] 2026-01-11 00:14:08,699 | INFO     | sufficient remaining disk space (127983943680 B)
[2026-01-10 19:14:44] 2026-01-11 00:14:08,700 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:14:44] 2026-01-11 00:14:08,700 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:14:44] 2026-01-11 00:14:08,700 | INFO     | update_server=False
[2026-01-10 19:14:44] 2026-01-11 00:14:08,700 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:14:44] 2026-01-11 00:14:08,700 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:14:44] 2026-01-11 00:14:08,803 | INFO     | all payload control threads have been joined
[2026-01-10 19:14:44] 2026-01-11 00:14:09,129 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:14:44] 2026-01-11 00:14:09,581 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:14:44] 2026-01-11 00:14:09,581 | INFO     | aborting loop
[2026-01-10 19:14:44] 2026-01-11 00:14:09,656 | INFO     | all data control threads have been joined
[2026-01-10 19:14:44] 2026-01-11 00:14:09,708 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:14:44] 2026-01-11 00:14:09,808 | INFO     | [payload] control thread has finished
[2026-01-10 19:14:44] 2026-01-11 00:14:09,813 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:14:44] 2026-01-11 00:14:09,882 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:14:44] 2026-01-11 00:14:09,937 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:14:44] 2026-01-11 00:14:09,971 | INFO     | all job control threads have been joined
[2026-01-10 19:14:44] 2026-01-11 00:14:10,135 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:14:44] 2026-01-11 00:14:10,455 | INFO     | [job] validate thread has finished
[2026-01-10 19:14:44] 2026-01-11 00:14:10,460 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:14:44] 2026-01-11 00:14:10,587 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:14:44] 2026-01-11 00:14:10,605 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:14:44] 2026-01-11 00:14:10,610 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:14:44] 2026-01-11 00:14:10,662 | INFO     | [data] control thread has finished
[2026-01-10 19:14:44] 2026-01-11 00:14:10,710 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:14:44] 2026-01-11 00:14:10,977 | INFO     | [job] control thread has finished
[2026-01-10 19:14:44] 2026-01-11 00:14:11,124 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:14:44] 2026-01-11 00:14:11,210 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:14:44] 2026-01-11 00:14:13,891 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:14:44] 2026-01-11 00:14:30,191 [wrapper] supervise_pilot (15 min periods counter: 4)
[2026-01-10 19:14:44] 2026-01-11 00:14:36,403 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:14:44] 2026-01-11 00:14:37,658 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140121622460224)>', '<ExcThread(monitor, started 140121269585664)>']
[2026-01-10 19:14:44] 2026-01-11 00:14:38,025 | INFO     | PID=1130320 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:14:44] 2026-01-11 00:14:38,025 | INFO     | .. there are 15 such processes running
[2026-01-10 19:14:44] 2026-01-11 00:14:38,026 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:14:44] 2026-01-11 00:14:38,026 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:14:44] 2026-01-11 00:14:38,026 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:14:44] 2026-01-11 00:14:38,026 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:14:44] 2026-01-11 00:14:38,026 | INFO     | [monitor] control thread has ended
[2026-01-10 19:14:44] 2026-01-11 00:14:42,687 | INFO     | all workflow threads have been joined
[2026-01-10 19:14:44] 2026-01-11 00:14:42,688 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:14:44] 2026-01-11 00:14:42,688 | INFO     | traces error code: 0
[2026-01-10 19:14:44] 2026-01-11 00:14:42,688 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:14:44] 2026-01-11 00:14:42,997 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:14:44] 2026-01-11 00:14:43,038 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:14:44] 2026-01-11 00:14:43,054 [wrapper] pilotpid: 1130320
[2026-01-10 19:14:44] 2026-01-11 00:14:43,057 [wrapper] Pilot exit status: 0
[2026-01-10 19:14:44] 2026-01-11 00:14:43,176 [wrapper] pandaids: 6965803380 6965803380
[2026-01-10 19:14:44] 2026-01-11 00:14:43,471 [wrapper] cleanup supervisor_pilot 1245967 1130321
[2026-01-10 19:14:44] 2026-01-11 00:14:43,474 [wrapper] Test setup, not cleaning
[2026-01-10 19:14:44] 2026-01-11 00:14:43,517 [wrapper] apfmon messages muted
[2026-01-10 19:14:44] 2026-01-11 00:14:43,549 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:14:44] 2026-01-11 00:14:43,577 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:14:44]  *** Error codes and diagnostics ***
[2026-01-10 19:14:44]     "exeErrorCode": 0,
[2026-01-10 19:14:44]     "exeErrorDiag": "",
[2026-01-10 19:14:44]     "pilotErrorCode": 0,
[2026-01-10 19:14:44]     "pilotErrorDiag": "",
[2026-01-10 19:14:44]  *** Listing of results directory ***
[2026-01-10 19:14:44] total 814820
[2026-01-10 19:14:44] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-10 19:14:44] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 19:14:44] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:01 queuedata.json
[2026-01-10 19:14:44] -rwx------. 1 boincer umatlas     36322 Jan 10 18:02 runpilot2-wrapper.sh
[2026-01-10 19:14:44] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:14:44] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:02 run_atlas
[2026-01-10 19:14:44] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:02 job.xml
[2026-01-10 19:14:44] -rw-r--r--. 3 boincer umatlas 391498270 Jan 10 18:02 EVNT.47962006._000035.pool.root.1
[2026-01-10 19:14:44] -rw-r--r--. 3 boincer umatlas 391498270 Jan 10 18:02 ATLAS.root_0
[2026-01-10 19:14:44] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:02 start_atlas.sh
[2026-01-10 19:14:44] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:02 shared
[2026-01-10 19:14:44] -rw-r--r--. 2 boincer umatlas    592615 Jan 10 18:02 input.tar.gz
[2026-01-10 19:14:44] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:02 boinc_lockfile
[2026-01-10 19:14:44] -rw-------. 1 boincer umatlas   1516240 Jan 10 18:03 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:14:44] -rw-r--r--. 1 boincer umatlas      2889 Jan 10 18:29 pandaJob.out
[2026-01-10 19:14:44] -rw-------. 1 boincer umatlas        57 Jan 10 18:29 setup.sh.local
[2026-01-10 19:14:44] -rw-------. 1 boincer umatlas    989548 Jan 10 18:29 agis_schedconf.cvmfs.json
[2026-01-10 19:14:44] -rw-r--r--. 1 boincer umatlas       530 Jan 10 19:02 boinc_task_state.xml
[2026-01-10 19:14:44] -rw-r--r--. 1 boincer umatlas      6956 Jan 10 19:10 init_data.xml
[2026-01-10 19:14:44] -rw-------. 1 boincer umatlas  44295115 Jan 10 19:12 HITS.47962010._002832.pool.root.1
[2026-01-10 19:14:44] -rw-------. 1 boincer umatlas      1040 Jan 10 19:13 memory_monitor_summary.json
[2026-01-10 19:14:44] -rw-------. 1 boincer umatlas   1170531 Jan 10 19:13 log.47962010._002832.job.log.tgz.1
[2026-01-10 19:14:44] -rw-------. 1 boincer umatlas      7882 Jan 10 19:14 heartbeat.json
[2026-01-10 19:14:44] -rw-r--r--. 1 boincer umatlas        27 Jan 10 19:14 wrapper_checkpoint.txt
[2026-01-10 19:14:44] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 19:14 boinc_mmap_file
[2026-01-10 19:14:44] -rw-------. 1 boincer umatlas        96 Jan 10 19:14 pilot_heartbeat.json
[2026-01-10 19:14:44] -rw-------. 1 boincer umatlas      4825 Jan 10 19:14 pilotlog.txt
[2026-01-10 19:14:44] -rw-------. 1 boincer umatlas    411114 Jan 10 19:14 log.47962010._002832.job.log.1
[2026-01-10 19:14:44] -rw-------. 1 boincer umatlas       353 Jan 10 19:14 output.list
[2026-01-10 19:14:44] -rw-r--r--. 1 boincer umatlas       620 Jan 10 19:14 runtime_log
[2026-01-10 19:14:44] -rw-------. 1 boincer umatlas   1597440 Jan 10 19:14 result.tar.gz
[2026-01-10 19:14:44] -rw-r--r--. 1 boincer umatlas      9422 Jan 10 19:14 runtime_log.err
[2026-01-10 19:14:44] -rw-------. 1 boincer umatlas       778 Jan 10 19:14 QOIODmD9wy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhdhKDmQCSzNm.diag
[2026-01-10 19:14:44] -rw-r--r--. 1 boincer umatlas     24590 Jan 10 19:14 stderr.txt
[2026-01-10 19:14:44] HITS file was successfully produced:
[2026-01-10 19:14:44] -rw-------. 1 boincer umatlas 44295115 Jan 10 19:12 shared/HITS.pool.root.1
[2026-01-10 19:14:44]  *** Contents of shared directory: ***
[2026-01-10 19:14:44] total 427744
[2026-01-10 19:14:44] -rw-r--r--. 3 boincer umatlas 391498270 Jan 10 18:02 ATLAS.root_0
[2026-01-10 19:14:44] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:02 start_atlas.sh
[2026-01-10 19:14:44] -rw-r--r--. 2 boincer umatlas    592615 Jan 10 18:02 input.tar.gz
[2026-01-10 19:14:44] -rw-------. 1 boincer umatlas  44295115 Jan 10 19:12 HITS.pool.root.1
[2026-01-10 19:14:44] -rw-------. 1 boincer umatlas   1597440 Jan 10 19:14 result.tar.gz
19:14:46 (1118732): run_atlas exited; CPU time 11625.637921
19:14:46 (1118732): called boinc_finish(0)

</stderr_txt>
]]>

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