Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:03:18 (2813193): wrapper (7.7.26015): starting
18:03:18 (2813193): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 18:03:18] Arguments: --nthreads 8
[2026-01-10 18:03:18] Threads: 8
[2026-01-10 18:03:18] Checking for CVMFS
[2026-01-10 18:03:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:03:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:03:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:03:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:03:19] 2.13.3.0 11360 95350 373952 154994 2 101 32408384 32935937 21390 16776704 0 407581820 99.512 520631238 36052 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 18:03:19] CVMFS is ok
[2026-01-10 18:03:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:03:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:03:19] Further information can be found at the LHC@home message board.
[2026-01-10 18:03:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:03:19] Checking for apptainer binary...
[2026-01-10 18:03:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:03:19] Running /usr/bin/apptainer --version
[2026-01-10 18:03:19] apptainer version 1.4.5-2.el9
[2026-01-10 18:03:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:03:20] c6-8-25-3.aglt2.org
[2026-01-10 18:03:20] apptainer works
[2026-01-10 18:03:20] Set ATHENA_PROC_NUMBER=8
[2026-01-10 18:03:20] Set ATHENA_CORE_NUMBER=8
[2026-01-10 18:03:20] Starting ATLAS job with PandaID=6965803347
[2026-01-10 18:03:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 20:01:36]  *** The last 200 lines of the pilot log: ***
[2026-01-10 20:01:36] 2026-01-11 01:01:02,290 | INFO     | time since job start (7024s) is within the limit (349056.0s)
[2026-01-10 20:01:36] 2026-01-11 01:01:03,370 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 20:01:36] 2026-01-11 01:01:03,383 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2797.1550833333336
[2026-01-10 20:01:36] 2026-01-11 01:01:03,400 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965803347/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 20:01:36] 2026-01-11 01:01:03,401 | INFO     | extracted standard info from prmon json
[2026-01-10 20:01:36] 2026-01-11 01:01:03,401 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 20:01:36] 2026-01-11 01:01:03,401 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 20:01:36] 2026-01-11 01:01:03,404 | INFO     | fitting pss+swap vs Time
[2026-01-10 20:01:36] 2026-01-11 01:01:03,404 | INFO     | sum of square deviations: 459259097.5175436
[2026-01-10 20:01:36] 2026-01-11 01:01:03,405 | INFO     | sum of deviations: 28000048565.833324
[2026-01-10 20:01:36] 2026-01-11 01:01:03,405 | INFO     | mean x: 1768089777.2192984
[2026-01-10 20:01:36] 2026-01-11 01:01:03,405 | INFO     | mean y: 2327366.1666666665
[2026-01-10 20:01:36] 2026-01-11 01:01:03,405 | INFO     | intersect: -107794338826.1729
[2026-01-10 20:01:36] 2026-01-11 01:01:03,405 | INFO     | chi2: 5.700149439106774
[2026-01-10 20:01:36] 2026-01-11 01:01:03,406 | INFO     | sum of square deviations: 401450462.3119272
[2026-01-10 20:01:36] 2026-01-11 01:01:03,406 | INFO     | sum of deviations: 45579892900.94496
[2026-01-10 20:01:36] 2026-01-11 01:01:03,406 | INFO     | mean x: 1768089624.7522936
[2026-01-10 20:01:36] 2026-01-11 01:01:03,406 | INFO     | mean y: 2373299.220183486
[2026-01-10 20:01:36] 2026-01-11 01:01:03,406 | INFO     | intersect: -200743031928.0468
[2026-01-10 20:01:36] 2026-01-11 01:01:03,407 | INFO     | chi2: 4.259130497126854
[2026-01-10 20:01:36] 2026-01-11 01:01:03,407 | INFO     | current chi2=4.259130497126854 (change=25.280371284541804 %)
[2026-01-10 20:01:36] 2026-01-11 01:01:03,407 | INFO     | sum of square deviations: 348705284.9134616
[2026-01-10 20:01:36] 2026-01-11 01:01:03,407 | INFO     | sum of deviations: 53105860933.58658
[2026-01-10 20:01:36] 2026-01-11 01:01:03,408 | INFO     | mean x: 1768089472.2788463
[2026-01-10 20:01:36] 2026-01-11 01:01:03,408 | INFO     | mean y: 2394920.221153846
[2026-01-10 20:01:36] 2026-01-11 01:01:03,408 | INFO     | intersect: -269267724275.93927
[2026-01-10 20:01:36] 2026-01-11 01:01:03,408 | INFO     | chi2: 3.8085277173618275
[2026-01-10 20:01:36] 2026-01-11 01:01:03,408 | INFO     | current chi2=3.8085277173618275 (change=10.579689447623092 %)
[2026-01-10 20:01:36] 2026-01-11 01:01:03,408 | INFO     | right removable region: 103
[2026-01-10 20:01:36] 2026-01-11 01:01:03,408 | INFO     | sum of square deviations: 401400442.3119272
[2026-01-10 20:01:36] 2026-01-11 01:01:03,409 | INFO     | sum of deviations: -3472685392.2844
[2026-01-10 20:01:36] 2026-01-11 01:01:03,409 | INFO     | mean x: 1768089929.7522936
[2026-01-10 20:01:36] 2026-01-11 01:01:03,409 | INFO     | mean y: 2410009.137614679
[2026-01-10 20:01:36] 2026-01-11 01:01:03,409 | INFO     | intersect: 15298905538.468765
[2026-01-10 20:01:36] 2026-01-11 01:01:03,409 | INFO     | chi2: 2.339363267274629
[2026-01-10 20:01:36] 2026-01-11 01:01:03,409 | INFO     | current chi2=2.339363267274629 (change=58.959615142279276 %)
[2026-01-10 20:01:36] 2026-01-11 01:01:03,410 | INFO     | sum of square deviations: 348624704.46153814
[2026-01-10 20:01:36] 2026-01-11 01:01:03,410 | INFO     | sum of deviations: -12934534930.99998
[2026-01-10 20:01:36] 2026-01-11 01:01:03,410 | INFO     | mean x: 1768090082.2692308
[2026-01-10 20:01:36] 2026-01-11 01:01:03,410 | INFO     | mean y: 2436854.75
[2026-01-10 20:01:36] 2026-01-11 01:01:03,410 | INFO     | intersect: 65601410873.49759
[2026-01-10 20:01:36] 2026-01-11 01:01:03,411 | INFO     | chi2: 1.854827681836781
[2026-01-10 20:01:36] 2026-01-11 01:01:03,411 | INFO     | current chi2=1.854827681836781 (change=20.712284928810337 %)
[2026-01-10 20:01:36] 2026-01-11 01:01:03,411 | INFO     | left removable region: 20
[2026-01-10 20:01:36] 2026-01-11 01:01:03,411 | INFO     | sum of square deviations: 177221761.18072256
[2026-01-10 20:01:36] 2026-01-11 01:01:03,411 | INFO     | sum of deviations: 7178293758.349399
[2026-01-10 20:01:36] 2026-01-11 01:01:03,411 | INFO     | mean x: 1768090051.759036
[2026-01-10 20:01:36] 2026-01-11 01:01:03,411 | INFO     | mean y: 2556001.8674698793
[2026-01-10 20:01:36] 2026-01-11 01:01:03,411 | INFO     | intersect: -71613196477.86876
[2026-01-10 20:01:36] 2026-01-11 01:01:03,412 | INFO     | chi2: 0.04117176753420302
[2026-01-10 20:01:36] 2026-01-11 01:01:03,412 | INFO     | current memory leak: 40.50 B/s (using 83 data points, chi2=0.04)
[2026-01-10 20:01:36] 2026-01-11 01:01:03,412 | INFO     | could have reported an average CPU frequency of 2770 MHz (7 samples)
[2026-01-10 20:01:36] 2026-01-11 01:01:03,412 | INFO     | ..............................
[2026-01-10 20:01:36] 2026-01-11 01:01:03,412 | INFO     | . Timing measurements:
[2026-01-10 20:01:36] 2026-01-11 01:01:03,413 | INFO     | . get job = 0 s
[2026-01-10 20:01:36] 2026-01-11 01:01:03,413 | INFO     | . initial setup = 3 s
[2026-01-10 20:01:36] 2026-01-11 01:01:03,413 | INFO     | . payload setup = 26 s
[2026-01-10 20:01:36] 2026-01-11 01:01:03,413 | INFO     | . stage-in = 0 s
[2026-01-10 20:01:36] 2026-01-11 01:01:03,413 | INFO     | . payload execution = 6941 s
[2026-01-10 20:01:36] 2026-01-11 01:01:03,413 | INFO     | . stage-out = 0 s
[2026-01-10 20:01:36] 2026-01-11 01:01:03,413 | INFO     | . log creation = 0 s
[2026-01-10 20:01:36] 2026-01-11 01:01:03,413 | INFO     | ..............................
[2026-01-10 20:01:36] 2026-01-11 01:01:03,506 | INFO     | 
[2026-01-10 20:01:36] 2026-01-11 01:01:03,506 | INFO     | job summary report
[2026-01-10 20:01:36] 2026-01-11 01:01:03,506 | INFO     | --------------------------------------------------
[2026-01-10 20:01:36] 2026-01-11 01:01:03,506 | INFO     | PanDA job id: 6965803347
[2026-01-10 20:01:36] 2026-01-11 01:01:03,506 | INFO     | task id: 47962010
[2026-01-10 20:01:36] 2026-01-11 01:01:03,506 | INFO     | errors: (none)
[2026-01-10 20:01:36] 2026-01-11 01:01:03,506 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 20:01:36] 2026-01-11 01:01:03,506 | INFO     | pilot state: finished 
[2026-01-10 20:01:36] 2026-01-11 01:01:03,506 | INFO     | transexitcode: 0
[2026-01-10 20:01:36] 2026-01-11 01:01:03,506 | INFO     | exeerrorcode: 0
[2026-01-10 20:01:36] 2026-01-11 01:01:03,506 | INFO     | exeerrordiag: 
[2026-01-10 20:01:36] 2026-01-11 01:01:03,506 | INFO     | exitcode: 0
[2026-01-10 20:01:36] 2026-01-11 01:01:03,507 | INFO     | exitmsg: OK
[2026-01-10 20:01:36] 2026-01-11 01:01:03,507 | INFO     | cpuconsumptiontime: 14962 s
[2026-01-10 20:01:36] 2026-01-11 01:01:03,507 | INFO     | nevents: 50
[2026-01-10 20:01:36] 2026-01-11 01:01:03,507 | INFO     | neventsw: 0
[2026-01-10 20:01:36] 2026-01-11 01:01:03,507 | INFO     | pid: 2850022
[2026-01-10 20:01:36] 2026-01-11 01:01:03,507 | INFO     | pgrp: 2850022
[2026-01-10 20:01:36] 2026-01-11 01:01:03,507 | INFO     | corecount: 8
[2026-01-10 20:01:36] 2026-01-11 01:01:03,507 | INFO     | event service: False
[2026-01-10 20:01:36] 2026-01-11 01:01:03,507 | INFO     | sizes: {0: 2284392, 1: 2284591, 12: 2284591, 17: 2284881, 23: 2284909, 6970: 2312896, 6971: 2313023, 6973: 2322129, 6980: 2322347}
[2026-01-10 20:01:36] 2026-01-11 01:01:03,507 | INFO     | --------------------------------------------------
[2026-01-10 20:01:36] 2026-01-11 01:01:03,507 | INFO     | 
[2026-01-10 20:01:36] 2026-01-11 01:01:03,507 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 20:01:36] 2026-01-11 01:01:03,529 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 20:01:36] 2026-01-11 01:01:03,529 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 20:01:36] 2026-01-11 01:01:03,529 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 20:01:36] 2026-01-11 01:01:03,529 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 20:01:36] 2026-01-11 01:01:03,530 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 20:01:36] 2026-01-11 01:01:03,530 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 20:01:36] 2026-01-11 01:01:03,530 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 20:01:36] 2026-01-11 01:01:03,530 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 20:01:36] 2026-01-11 01:01:03,530 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 20:01:36] 2026-01-11 01:01:03,530 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 20:01:36] 2026-01-11 01:01:03,530 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 20:01:36] 2026-01-11 01:01:03,530 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 20:01:36] 2026-01-11 01:01:03,530 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 20:01:36] 2026-01-11 01:01:03,530 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 20:01:36] 2026-01-11 01:01:03,530 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 20:01:36] 2026-01-11 01:01:03,530 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 20:01:36] 2026-01-11 01:01:03,530 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 20:01:36] 2026-01-11 01:01:03,531 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 20:01:36] 2026-01-11 01:01:03,531 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 20:01:36] 2026-01-11 01:01:03,531 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 20:01:36] 2026-01-11 01:01:03,531 | INFO     | job 6965803347 has completed (purged errors)
[2026-01-10 20:01:36] 2026-01-11 01:01:03,531 | INFO     | overall cleanup function is called
[2026-01-10 20:01:36] 2026-01-11 01:01:04,545 | INFO     | --- collectZombieJob: --- 10, [2850022]
[2026-01-10 20:01:36] 2026-01-11 01:01:04,545 | INFO     | zombie collector waiting for pid 2850022
[2026-01-10 20:01:36] 2026-01-11 01:01:04,545 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 20:01:36] 2026-01-11 01:01:04,545 | INFO     | collected zombie processes
[2026-01-10 20:01:36] 2026-01-11 01:01:04,545 | INFO     | will attempt to kill all subprocesses of pid=2850022
[2026-01-10 20:01:36] 2026-01-11 01:01:04,954 | INFO     | process IDs to be killed: [2850022] (in reverse order)
[2026-01-10 20:01:36] 2026-01-11 01:01:05,077 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 20:01:36] 2026-01-11 01:01:05,077 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 20:01:36] 2026-01-11 01:01:05,092 | INFO     | did not find any defunct processes belonging to 2850022
[2026-01-10 20:01:36] 2026-01-11 01:01:05,112 | INFO     | did not find any defunct processes belonging to 2850022
[2026-01-10 20:01:36] 2026-01-11 01:01:05,112 | INFO     | ready for new job
[2026-01-10 20:01:36] 2026-01-11 01:01:05,112 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 20:01:36] 2026-01-11 01:01:05,114 | INFO     | ***************************************
[2026-01-10 20:01:36] 2026-01-11 01:01:05,114 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 20:01:36] 2026-01-11 01:01:05,114 | INFO     | ***************************************
[2026-01-10 20:01:36] 2026-01-11 01:01:05,114 | INFO     | 
[2026-01-10 20:01:36] 2026-01-11 01:01:05,120 | INFO     | architecture information:
[2026-01-10 20:01:36] 2026-01-11 01:01:05,120 | INFO     | executing command: cat /etc/os-release
[2026-01-10 20:01:36] 2026-01-11 01:01:05,139 | INFO     | cat /etc/os-release:
[2026-01-10 20:01:36] NAME="CentOS Linux"
[2026-01-10 20:01:36] VERSION="7 (Core)"
[2026-01-10 20:01:36] ID="centos"
[2026-01-10 20:01:36] ID_LIKE="rhel fedora"
[2026-01-10 20:01:36] VERSION_ID="7"
[2026-01-10 20:01:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 20:01:36] ANSI_COLOR="0;31"
[2026-01-10 20:01:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 20:01:36] HOME_URL="https://www.centos.org/"
[2026-01-10 20:01:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 20:01:36] 
[2026-01-10 20:01:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 20:01:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 20:01:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 20:01:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 20:01:36] 
[2026-01-10 20:01:36] 2026-01-11 01:01:05,139 | INFO     | ***************************************
[2026-01-10 20:01:36] 2026-01-11 01:01:05,642 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 20:01:36] 2026-01-11 01:01:05,663 | INFO     | sufficient remaining disk space (75880202240 B)
[2026-01-10 20:01:36] 2026-01-11 01:01:05,663 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 20:01:36] 2026-01-11 01:01:05,663 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 20:01:36] 2026-01-11 01:01:05,663 | INFO     | update_server=False
[2026-01-10 20:01:36] 2026-01-11 01:01:05,663 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 20:01:36] 2026-01-11 01:01:06,061 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 20:01:36] 2026-01-11 01:01:06,061 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 20:01:36] 2026-01-11 01:01:06,061 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:01:36] 2026-01-11 01:01:06,061 | INFO     | will abort loop
[2026-01-10 20:01:36] 2026-01-11 01:01:06,481 | INFO     | all data control threads have been joined
[2026-01-10 20:01:36] 2026-01-11 01:01:06,619 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 20:01:36] 2026-01-11 01:01:06,668 | INFO     | [job] retrieve thread has finished
[2026-01-10 20:01:36] 2026-01-11 01:01:06,707 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 20:01:36] 2026-01-11 01:01:06,737 | INFO     | all job control threads have been joined
[2026-01-10 20:01:36] 2026-01-11 01:01:06,793 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 20:01:36] 2026-01-11 01:01:07,056 | INFO     | all payload control threads have been joined
[2026-01-10 20:01:36] 2026-01-11 01:01:07,066 | INFO     | [job] job monitor thread has finished
[2026-01-10 20:01:36] 2026-01-11 01:01:07,486 | INFO     | [data] control thread has finished
[2026-01-10 20:01:36] 2026-01-11 01:01:07,705 | INFO     | [payload] validate_post thread has finished
[2026-01-10 20:01:36] 2026-01-11 01:01:07,714 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 20:01:36] 2026-01-11 01:01:07,742 | INFO     | [job] control thread has finished
[2026-01-10 20:01:36] 2026-01-11 01:01:07,799 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 20:01:36] 2026-01-11 01:01:07,874 | INFO     | [job] validate thread has finished
[2026-01-10 20:01:36] 2026-01-11 01:01:07,932 | INFO     | [data] copytool_in thread has finished
[2026-01-10 20:01:36] 2026-01-11 01:01:08,062 | INFO     | [payload] control thread has finished
[2026-01-10 20:01:36] 2026-01-11 01:01:08,222 | INFO     | [payload] failed_post thread has finished
[2026-01-10 20:01:36] 2026-01-11 01:01:08,516 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:01:36] 2026-01-11 01:01:08,625 | INFO     | [data] copytool_out thread has finished
[2026-01-10 20:01:36] 2026-01-11 01:01:09,521 | INFO     | [job] queue monitor thread has finished
[2026-01-10 20:01:36] 2026-01-11 01:01:09,783 | INFO     | [monitor] cgroup control has ended
[2026-01-10 20:01:36] 2026-01-11 01:01:10,714 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 20:01:36] 2026-01-11 01:01:16,127 | INFO     | job.realtimelogging is not enabled
[2026-01-10 20:01:36] 2026-01-11 01:01:17,132 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 20:01:36] 2026-01-11 01:01:17,714 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139880158029632)>', '<ExcThread(monitor, started 139879367309056)>']
[2026-01-10 20:01:36] 2026-01-11 01:01:22,739 | INFO     | all workflow threads have been joined
[2026-01-10 20:01:36] 2026-01-11 01:01:22,739 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 20:01:36] 2026-01-11 01:01:22,739 | INFO     | traces error code: 0
[2026-01-10 20:01:36] 2026-01-11 01:01:22,740 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 20:01:36] 2026-01-11 01:01:35,756 | INFO     | PID=2825055 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 20:01:36] 2026-01-11 01:01:35,757 | INFO     | .. there are 19 such processes running
[2026-01-10 20:01:36] 2026-01-11 01:01:35,757 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 20:01:36] 2026-01-11 01:01:35,758 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 20:01:36] 2026-01-11 01:01:35,758 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 20:01:36] 2026-01-11 01:01:35,758 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 20:01:36] 2026-01-11 01:01:35,758 | INFO     | [monitor] control thread has ended
[2026-01-10 20:01:36] 2026-01-11 01:01:35,900 [wrapper] ==== pilot stdout END ====
[2026-01-10 20:01:36] 2026-01-11 01:01:35,903 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 20:01:36] 2026-01-11 01:01:35,906 [wrapper] pilotpid: 2825055
[2026-01-10 20:01:36] 2026-01-11 01:01:35,910 [wrapper] Pilot exit status: 0
[2026-01-10 20:01:36] 2026-01-11 01:01:35,920 [wrapper] pandaids: 6965803347
[2026-01-10 20:01:36] 2026-01-11 01:01:36,003 [wrapper] cleanup supervisor_pilot 3133909 2825056
[2026-01-10 20:01:36] 2026-01-11 01:01:36,006 [wrapper] Test setup, not cleaning
[2026-01-10 20:01:36] 2026-01-11 01:01:36,009 [wrapper] apfmon messages muted
[2026-01-10 20:01:36] 2026-01-11 01:01:36,012 [wrapper] ==== wrapper stdout END ====
[2026-01-10 20:01:36] 2026-01-11 01:01:36,014 [wrapper] ==== wrapper stderr END ====
[2026-01-10 20:01:36]  *** Error codes and diagnostics ***
[2026-01-10 20:01:36]     "exeErrorCode": 0,
[2026-01-10 20:01:36]     "exeErrorDiag": "",
[2026-01-10 20:01:36]     "pilotErrorCode": 0,
[2026-01-10 20:01:36]     "pilotErrorDiag": "",
[2026-01-10 20:01:36]  *** Listing of results directory ***
[2026-01-10 20:01:36] total 432488
[2026-01-10 20:01:36] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 20:01:36] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:01 queuedata.json
[2026-01-10 20:01:36] -rwx------. 1 boincer umatlas     36322 Jan 10 18:02 runpilot2-wrapper.sh
[2026-01-10 20:01:36] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 20:01:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:03 run_atlas
[2026-01-10 20:01:36] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:03 job.xml
[2026-01-10 20:01:36] -rw-r--r--. 2 boincer umatlas 391949667 Jan 10 18:03 EVNT.47962006._000105.pool.root.1
[2026-01-10 20:01:36] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:03 start_atlas.sh
[2026-01-10 20:01:36] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:03 shared
[2026-01-10 20:01:36] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 18:03 input.tar.gz
[2026-01-10 20:01:36] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:03 boinc_lockfile
[2026-01-10 20:01:36] -rw-r--r--. 1 boincer umatlas      2887 Jan 10 18:03 pandaJob.out
[2026-01-10 20:01:36] -rw-------. 1 boincer umatlas        57 Jan 10 18:03 setup.sh.local
[2026-01-10 20:01:36] -rw-------. 1 boincer umatlas    989548 Jan 10 18:03 agis_schedconf.cvmfs.json
[2026-01-10 20:01:36] -rw-------. 1 boincer umatlas   1516240 Jan 10 18:03 agis_ddmendpoints.agis.ALL.json
[2026-01-10 20:01:36] drwx------. 5 boincer umatlas      4096 Jan 10 18:03 pilot3
[2026-01-10 20:01:36] -rw-r--r--. 1 boincer umatlas       530 Jan 10 19:46 boinc_task_state.xml
[2026-01-10 20:01:36] -rw-r--r--. 1 boincer umatlas      6875 Jan 10 19:58 init_data.xml
[2026-01-10 20:01:36] -rw-------. 1 boincer umatlas  42622891 Jan 10 20:00 HITS.47962010._002799.pool.root.1
[2026-01-10 20:01:36] -rw-------. 1 boincer umatlas      1037 Jan 10 20:00 memory_monitor_summary.json
[2026-01-10 20:01:36] -rw-------. 1 boincer umatlas   1224789 Jan 10 20:00 log.47962010._002799.job.log.tgz.1
[2026-01-10 20:01:36] -rw-------. 1 boincer umatlas        95 Jan 10 20:00 pilot_heartbeat.json
[2026-01-10 20:01:36] -rw-------. 1 boincer umatlas      8568 Jan 10 20:01 heartbeat.json
[2026-01-10 20:01:36] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 20:01 boinc_mmap_file
[2026-01-10 20:01:36] -rw-r--r--. 1 boincer umatlas        27 Jan 10 20:01 wrapper_checkpoint.txt
[2026-01-10 20:01:36] -rw-------. 1 boincer umatlas       823 Jan 10 20:01 pilotlog.txt
[2026-01-10 20:01:36] -rw-------. 1 boincer umatlas    967548 Jan 10 20:01 log.47962010._002799.job.log.1
[2026-01-10 20:01:36] -rw-------. 1 boincer umatlas       353 Jan 10 20:01 output.list
[2026-01-10 20:01:36] -rw-r--r--. 1 boincer umatlas       620 Jan 10 20:01 runtime_log
[2026-01-10 20:01:36] -rw-------. 1 boincer umatlas   2211840 Jan 10 20:01 result.tar.gz
[2026-01-10 20:01:36] -rw-r--r--. 1 boincer umatlas      9347 Jan 10 20:01 runtime_log.err
[2026-01-10 20:01:36] -rw-------. 1 boincer umatlas       654 Jan 10 20:01 NfFODmD9wy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfdhKDmypt2Mo.diag
[2026-01-10 20:01:36] -rw-r--r--. 1 boincer umatlas     21181 Jan 10 20:01 stderr.txt
[2026-01-10 20:01:36] HITS file was successfully produced:
[2026-01-10 20:01:36] -rw-------. 1 boincer umatlas 42622891 Jan 10 20:00 shared/HITS.pool.root.1
[2026-01-10 20:01:36]  *** Contents of shared directory: ***
[2026-01-10 20:01:36] total 427144
[2026-01-10 20:01:36] -rw-r--r--. 2 boincer umatlas 391949667 Jan 10 18:03 ATLAS.root_0
[2026-01-10 20:01:36] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:03 start_atlas.sh
[2026-01-10 20:01:36] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 18:03 input.tar.gz
[2026-01-10 20:01:36] -rw-------. 1 boincer umatlas  42622891 Jan 10 20:00 HITS.pool.root.1
[2026-01-10 20:01:36] -rw-------. 1 boincer umatlas   2211840 Jan 10 20:01 result.tar.gz
20:01:37 (2813193): run_atlas exited; CPU time 15169.600070
20:01:37 (2813193): called boinc_finish(0)

</stderr_txt>
]]>

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