Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:03:25 (229089): wrapper (7.7.26015): starting
18:03:25 (229089): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 18:03:25] Arguments: --nthreads 9
[2026-01-10 18:03:25] Threads: 9
[2026-01-10 18:03:25] Checking for CVMFS
[2026-01-10 18:03:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:03:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:03:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:03:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:03:27] 2.13.3.0 10787 24667 435012 154994 2 702 25730437 32935936 54644 16776704 0 255414030 99.801 115757732 27437 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 18:03:27] CVMFS is ok
[2026-01-10 18:03:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:03:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:03:28] Further information can be found at the LHC@home message board.
[2026-01-10 18:03:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:03:28] Checking for apptainer binary...
[2026-01-10 18:03:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:03:28] Running /usr/bin/apptainer --version
[2026-01-10 18:03:28] apptainer version 1.4.5-2.el9
[2026-01-10 18:03:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:03:28] lc-10-11.aglt2.org
[2026-01-10 18:03:28] apptainer works
[2026-01-10 18:03:28] Set ATHENA_PROC_NUMBER=9
[2026-01-10 18:03:28] Set ATHENA_CORE_NUMBER=9
[2026-01-10 18:03:29] Starting ATLAS job with PandaID=6965803188
[2026-01-10 18:03:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:31:40]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:31:40] 2026-01-11 00:30:41,509 | WARNING  | process 291952 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 19:31:40] 2026-01-11 00:30:41,510 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965803188/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:31:40] 2026-01-11 00:30:41,511 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965803188/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:31:40] 2026-01-11 00:30:41,512 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-10 19:31:40] 2026-01-11 00:30:41,512 | WARNING  | maxPSS not found in memory monitor output
[2026-01-10 19:31:40] 2026-01-11 00:30:41,528 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 19:31:40] 2026-01-11 00:30:41,637 | INFO     | time since job start (5200s) is within the limit (349056.0s)
[2026-01-10 19:31:40] 2026-01-11 00:30:43,030 | INFO     | number of running child processes to parent process 291952: 1
[2026-01-10 19:31:40] 2026-01-11 00:30:43,030 | INFO     | maximum number of monitored processes: 17
[2026-01-10 19:31:40] 2026-01-11 00:30:43,651 | INFO     | time since job start (5202s) is within the limit (349056.0s)
[2026-01-10 19:31:40] 2026-01-11 00:30:45,535 | INFO     | monitor loop #287: job 0:6965803188 is in state 'finished'
[2026-01-10 19:31:40] 2026-01-11 00:30:45,536 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:31:40] 2026-01-11 00:30:45,658 | INFO     | time since job start (5204s) is within the limit (349056.0s)
[2026-01-10 19:31:40] 2026-01-11 00:30:47,669 | INFO     | time since job start (5206s) is within the limit (349056.0s)
[2026-01-10 19:31:40] 2026-01-11 00:30:48,040 | INFO     | monitor loop #288: job 0:6965803188 is in state 'finished'
[2026-01-10 19:31:40] 2026-01-11 00:30:48,041 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:31:40] 2026-01-11 00:30:50,397 | INFO     | PID=246954 has CPU usage=16.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:31:40] 2026-01-11 00:30:50,397 | INFO     | .. there are 81 such processes running
[2026-01-10 19:31:40] 2026-01-11 00:30:50,565 | INFO     | monitor loop #289: job 0:6965803188 is in state 'finished'
[2026-01-10 19:31:40] 2026-01-11 00:30:50,566 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:31:40] 2026-01-11 00:30:51,402 | INFO     | time since job start (5210s) is within the limit (349056.0s)
[2026-01-10 19:31:40] 2026-01-11 00:30:53,070 | INFO     | monitor loop #290: job 0:6965803188 is in state 'finished'
[2026-01-10 19:31:40] 2026-01-11 00:30:53,071 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:31:40] 2026-01-11 00:30:53,409 | INFO     | time since job start (5212s) is within the limit (349056.0s)
[2026-01-10 19:31:40] 2026-01-11 00:30:55,418 | INFO     | time since job start (5214s) is within the limit (349056.0s)
[2026-01-10 19:31:40] 2026-01-11 00:30:55,577 | INFO     | monitor loop #291: job 0:6965803188 is in state 'finished'
[2026-01-10 19:31:40] 2026-01-11 00:30:55,578 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:31:40] 2026-01-11 00:30:57,426 | INFO     | time since job start (5216s) is within the limit (349056.0s)
[2026-01-10 19:31:40] 2026-01-11 00:30:58,082 | INFO     | monitor loop #292: job 0:6965803188 is in state 'finished'
[2026-01-10 19:31:40] 2026-01-11 00:30:58,083 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:31:40] 2026-01-11 00:30:59,441 | INFO     | time since job start (5218s) is within the limit (349056.0s)
[2026-01-10 19:31:40] 2026-01-11 00:31:00,589 | INFO     | monitor loop #293: job 0:6965803188 is in state 'finished'
[2026-01-10 19:31:40] 2026-01-11 00:31:00,590 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:31:40] 2026-01-11 00:31:01,448 | INFO     | time since job start (5220s) is within the limit (349056.0s)
[2026-01-10 19:31:40] 2026-01-11 00:31:03,101 | INFO     | monitor loop #294: job 0:6965803188 is in state 'finished'
[2026-01-10 19:31:40] 2026-01-11 00:31:03,102 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:31:40] 2026-01-11 00:31:03,455 | INFO     | time since job start (5222s) is within the limit (349056.0s)
[2026-01-10 19:31:40] 2026-01-11 00:31:05,462 | INFO     | time since job start (5224s) is within the limit (349056.0s)
[2026-01-10 19:31:40] 2026-01-11 00:31:05,606 | INFO     | monitor loop #295: job 0:6965803188 is in state 'finished'
[2026-01-10 19:31:40] 2026-01-11 00:31:05,607 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:31:40] 2026-01-11 00:31:05,869 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 19:31:40] 2026-01-11 00:31:05,879 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2848.8357708333338
[2026-01-10 19:31:40] 2026-01-11 00:31:05,896 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965803188/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:31:40] 2026-01-11 00:31:05,897 | INFO     | extracted standard info from prmon json
[2026-01-10 19:31:40] 2026-01-11 00:31:05,897 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:31:40] 2026-01-11 00:31:05,897 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:31:40] 2026-01-11 00:31:05,899 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:31:40] 2026-01-11 00:31:05,900 | INFO     | sum of square deviations: 141501282.1298703
[2026-01-10 19:31:40] 2026-01-11 00:31:05,900 | INFO     | sum of deviations: -7245178438.363636
[2026-01-10 19:31:40] 2026-01-11 00:31:05,900 | INFO     | mean x: 1768088932.2987013
[2026-01-10 19:31:40] 2026-01-11 00:31:05,900 | INFO     | mean y: 2557676.3636363638
[2026-01-10 19:31:40] 2026-01-11 00:31:05,901 | INFO     | intersect: 90532619429.74597
[2026-01-10 19:31:40] 2026-01-11 00:31:05,901 | INFO     | chi2: 1.6077936383460911
[2026-01-10 19:31:40] 2026-01-11 00:31:05,901 | INFO     | current memory leak: -51.20 B/s (using 77 data points, chi2=1.61)
[2026-01-10 19:31:40] 2026-01-11 00:31:05,901 | INFO     | could have reported an average CPU frequency of 2830 MHz (6 samples)
[2026-01-10 19:31:40] 2026-01-11 00:31:05,901 | INFO     | ..............................
[2026-01-10 19:31:40] 2026-01-11 00:31:05,901 | INFO     | . Timing measurements:
[2026-01-10 19:31:40] 2026-01-11 00:31:05,902 | INFO     | . get job = 0 s
[2026-01-10 19:31:40] 2026-01-11 00:31:05,902 | INFO     | . initial setup = 2 s
[2026-01-10 19:31:40] 2026-01-11 00:31:05,902 | INFO     | . payload setup = 16 s
[2026-01-10 19:31:40] 2026-01-11 00:31:05,902 | INFO     | . stage-in = 0 s
[2026-01-10 19:31:40] 2026-01-11 00:31:05,902 | INFO     | . payload execution = 5137 s
[2026-01-10 19:31:40] 2026-01-11 00:31:05,902 | INFO     | . stage-out = 1 s
[2026-01-10 19:31:40] 2026-01-11 00:31:05,902 | INFO     | . log creation = 0 s
[2026-01-10 19:31:40] 2026-01-11 00:31:05,902 | INFO     | ..............................
[2026-01-10 19:31:40] 2026-01-11 00:31:06,214 | INFO     | 
[2026-01-10 19:31:40] 2026-01-11 00:31:06,214 | INFO     | job summary report
[2026-01-10 19:31:40] 2026-01-11 00:31:06,214 | INFO     | --------------------------------------------------
[2026-01-10 19:31:40] 2026-01-11 00:31:06,214 | INFO     | PanDA job id: 6965803188
[2026-01-10 19:31:40] 2026-01-11 00:31:06,214 | INFO     | task id: 47962010
[2026-01-10 19:31:40] 2026-01-11 00:31:06,214 | INFO     | errors: (none)
[2026-01-10 19:31:40] 2026-01-11 00:31:06,214 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:31:40] 2026-01-11 00:31:06,214 | INFO     | pilot state: finished 
[2026-01-10 19:31:40] 2026-01-11 00:31:06,215 | INFO     | transexitcode: 0
[2026-01-10 19:31:40] 2026-01-11 00:31:06,215 | INFO     | exeerrorcode: 0
[2026-01-10 19:31:40] 2026-01-11 00:31:06,215 | INFO     | exeerrordiag: 
[2026-01-10 19:31:40] 2026-01-11 00:31:06,215 | INFO     | exitcode: 0
[2026-01-10 19:31:40] 2026-01-11 00:31:06,215 | INFO     | exitmsg: OK
[2026-01-10 19:31:40] 2026-01-11 00:31:06,215 | INFO     | cpuconsumptiontime: 15589 s
[2026-01-10 19:31:40] 2026-01-11 00:31:06,215 | INFO     | nevents: 50
[2026-01-10 19:31:40] 2026-01-11 00:31:06,215 | INFO     | neventsw: 0
[2026-01-10 19:31:40] 2026-01-11 00:31:06,215 | INFO     | pid: 291952
[2026-01-10 19:31:40] 2026-01-11 00:31:06,215 | INFO     | pgrp: 291952
[2026-01-10 19:31:40] 2026-01-11 00:31:06,221 | INFO     | corecount: 9
[2026-01-10 19:31:40] 2026-01-11 00:31:06,222 | INFO     | event service: False
[2026-01-10 19:31:40] 2026-01-11 00:31:06,222 | INFO     | sizes: {0: 2284615, 1: 2284615, 12: 2284643, 14: 2284933, 23: 2284961, 5158: 2312070, 5161: 2321064, 5162: 2321120, 5190: 2321366}
[2026-01-10 19:31:40] 2026-01-11 00:31:06,222 | INFO     | --------------------------------------------------
[2026-01-10 19:31:40] 2026-01-11 00:31:06,222 | INFO     | 
[2026-01-10 19:31:40] 2026-01-11 00:31:06,222 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 19:31:40] 2026-01-11 00:31:06,290 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:31:40] 2026-01-11 00:31:06,294 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:31:40] 2026-01-11 00:31:06,294 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:31:40] 2026-01-11 00:31:06,294 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:31:40] 2026-01-11 00:31:06,294 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:31:40] 2026-01-11 00:31:06,294 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:31:40] 2026-01-11 00:31:06,294 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:31:40] 2026-01-11 00:31:06,294 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:31:40] 2026-01-11 00:31:06,294 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:31:40] 2026-01-11 00:31:06,294 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:31:40] 2026-01-11 00:31:06,294 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:31:40] 2026-01-11 00:31:06,295 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:31:40] 2026-01-11 00:31:06,295 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:31:40] 2026-01-11 00:31:06,295 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:31:40] 2026-01-11 00:31:06,295 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:31:40] 2026-01-11 00:31:06,295 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:31:40] 2026-01-11 00:31:06,295 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:31:40] 2026-01-11 00:31:06,295 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:31:40] 2026-01-11 00:31:06,295 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:31:40] 2026-01-11 00:31:06,295 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:31:40] 2026-01-11 00:31:06,295 | INFO     | job 6965803188 has completed (purged errors)
[2026-01-10 19:31:40] 2026-01-11 00:31:06,295 | INFO     | overall cleanup function is called
[2026-01-10 19:31:40] 2026-01-11 00:31:07,330 | INFO     | --- collectZombieJob: --- 10, [291952]
[2026-01-10 19:31:40] 2026-01-11 00:31:07,331 | INFO     | zombie collector waiting for pid 291952
[2026-01-10 19:31:40] 2026-01-11 00:31:07,331 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:31:40] 2026-01-11 00:31:07,331 | INFO     | collected zombie processes
[2026-01-10 19:31:40] 2026-01-11 00:31:07,331 | INFO     | will attempt to kill all subprocesses of pid=291952
[2026-01-10 19:31:40] 2026-01-11 00:31:08,530 | INFO     | process IDs to be killed: [291952] (in reverse order)
[2026-01-10 19:31:40] 2026-01-11 00:31:08,796 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:31:40] 2026-01-11 00:31:08,796 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:31:40] 2026-01-11 00:31:08,824 | INFO     | did not find any defunct processes belonging to 291952
[2026-01-10 19:31:40] 2026-01-11 00:31:08,914 | INFO     | did not find any defunct processes belonging to 291952
[2026-01-10 19:31:40] 2026-01-11 00:31:08,914 | INFO     | ready for new job
[2026-01-10 19:31:40] 2026-01-11 00:31:08,926 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:31:40] 2026-01-11 00:31:08,927 | INFO     | ***************************************
[2026-01-10 19:31:40] 2026-01-11 00:31:08,950 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:31:40] 2026-01-11 00:31:08,951 | INFO     | ***************************************
[2026-01-10 19:31:40] 2026-01-11 00:31:08,951 | INFO     | 
[2026-01-10 19:31:40] 2026-01-11 00:31:08,967 | INFO     | architecture information:
[2026-01-10 19:31:40] 2026-01-11 00:31:08,968 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:31:40] 2026-01-11 00:31:09,042 | INFO     | cat /etc/os-release:
[2026-01-10 19:31:40] NAME="CentOS Linux"
[2026-01-10 19:31:40] VERSION="7 (Core)"
[2026-01-10 19:31:40] ID="centos"
[2026-01-10 19:31:40] ID_LIKE="rhel fedora"
[2026-01-10 19:31:40] VERSION_ID="7"
[2026-01-10 19:31:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:31:40] ANSI_COLOR="0;31"
[2026-01-10 19:31:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:31:40] HOME_URL="https://www.centos.org/"
[2026-01-10 19:31:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:31:40] 
[2026-01-10 19:31:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:31:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:31:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:31:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:31:40] 
[2026-01-10 19:31:40] 2026-01-11 00:31:09,042 | INFO     | ***************************************
[2026-01-10 19:31:40] 2026-01-11 00:31:09,546 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 19:31:40] 2026-01-11 00:31:09,584 | INFO     | sufficient remaining disk space (93635739648 B)
[2026-01-10 19:31:40] 2026-01-11 00:31:09,584 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:31:40] 2026-01-11 00:31:09,585 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:31:40] 2026-01-11 00:31:09,585 | INFO     | update_server=False
[2026-01-10 19:31:40] 2026-01-11 00:31:09,585 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:31:40] 2026-01-11 00:31:09,585 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:31:40] 2026-01-11 00:31:09,585 | INFO     | aborting loop
[2026-01-10 19:31:40] 2026-01-11 00:31:09,907 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:31:40] 2026-01-11 00:31:10,182 | INFO     | all payload control threads have been joined
[2026-01-10 19:31:40] 2026-01-11 00:31:10,547 | INFO     | all job control threads have been joined
[2026-01-10 19:31:40] 2026-01-11 00:31:10,591 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:31:40] 2026-01-11 00:31:10,592 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:31:40] 2026-01-11 00:31:10,652 | INFO     | all data control threads have been joined
[2026-01-10 19:31:40] 2026-01-11 00:31:10,714 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:31:40] 2026-01-11 00:31:10,722 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:31:40] 2026-01-11 00:31:10,821 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:31:40] 2026-01-11 00:31:10,960 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:31:40] 2026-01-11 00:31:11,129 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:31:40] 2026-01-11 00:31:11,130 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:31:40] 2026-01-11 00:31:11,179 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:31:40] 2026-01-11 00:31:11,188 | INFO     | [payload] control thread has finished
[2026-01-10 19:31:40] 2026-01-11 00:31:11,308 | INFO     | [job] validate thread has finished
[2026-01-10 19:31:40] 2026-01-11 00:31:11,440 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:31:40] 2026-01-11 00:31:11,444 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:31:40] 2026-01-11 00:31:11,555 | INFO     | [job] control thread has finished
[2026-01-10 19:31:40] 2026-01-11 00:31:11,658 | INFO     | [data] control thread has finished
[2026-01-10 19:31:40] 2026-01-11 00:31:12,026 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:31:40] 2026-01-11 00:31:12,135 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:31:40] 2026-01-11 00:31:12,729 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:31:40] 2026-01-11 00:31:16,040 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:31:40] 2026-01-11 00:31:17,892 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139621154936640)>', '<ExcThread(monitor, started 139620874422016)>']
[2026-01-10 19:31:40] 2026-01-11 00:31:22,918 | INFO     | all workflow threads have been joined
[2026-01-10 19:31:40] 2026-01-11 00:31:22,918 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:31:40] 2026-01-11 00:31:22,919 | INFO     | traces error code: 0
[2026-01-10 19:31:40] 2026-01-11 00:31:22,919 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:31:40] 2026-01-11 00:31:39,592 | INFO     | PID=246954 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 19:31:40] 2026-01-11 00:31:39,592 | INFO     | .. there are 81 such processes running
[2026-01-10 19:31:40] 2026-01-11 00:31:39,593 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:31:40] 2026-01-11 00:31:39,593 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:31:40] 2026-01-11 00:31:39,593 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:31:40] 2026-01-11 00:31:39,593 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:31:40] 2026-01-11 00:31:39,594 | INFO     | [monitor] control thread has ended
[2026-01-10 19:31:40] 2026-01-11 00:31:40,012 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:31:40] 2026-01-11 00:31:40,016 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:31:40] 2026-01-11 00:31:40,018 [wrapper] pilotpid: 246954
[2026-01-10 19:31:40] 2026-01-11 00:31:40,027 [wrapper] Pilot exit status: 0
[2026-01-10 19:31:40] 2026-01-11 00:31:40,060 [wrapper] pandaids: 6965803188
[2026-01-10 19:31:40] 2026-01-11 00:31:40,212 [wrapper] cleanup supervisor_pilot 1199347 246955
[2026-01-10 19:31:40] 2026-01-11 00:31:40,215 [wrapper] Test setup, not cleaning
[2026-01-10 19:31:40] 2026-01-11 00:31:40,217 [wrapper] apfmon messages muted
[2026-01-10 19:31:40] 2026-01-11 00:31:40,220 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:31:40] 2026-01-11 00:31:40,222 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:31:40]  *** Error codes and diagnostics ***
[2026-01-10 19:31:40]     "exeErrorCode": 0,
[2026-01-10 19:31:40]     "exeErrorDiag": "",
[2026-01-10 19:31:40]     "pilotErrorCode": 0,
[2026-01-10 19:31:40]     "pilotErrorDiag": "",
[2026-01-10 19:31:40]  *** Listing of results directory ***
[2026-01-10 19:31:40] total 434456
[2026-01-10 19:31:40] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 19:31:40] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:01 queuedata.json
[2026-01-10 19:31:40] -rwx------. 1 boincer umatlas     36322 Jan 10 18:02 runpilot2-wrapper.sh
[2026-01-10 19:31:40] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:31:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:03 run_atlas
[2026-01-10 19:31:40] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:03 job.xml
[2026-01-10 19:31:40] -rw-r--r--. 2 boincer umatlas 391771826 Jan 10 18:03 EVNT.47962006._000010.pool.root.1
[2026-01-10 19:31:40] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:03 start_atlas.sh
[2026-01-10 19:31:40] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:03 shared
[2026-01-10 19:31:40] -rw-r--r--. 2 boincer umatlas    592613 Jan 10 18:03 input.tar.gz
[2026-01-10 19:31:40] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:03 boinc_lockfile
[2026-01-10 19:31:40] -rw-r--r--. 1 boincer umatlas      2888 Jan 10 18:03 pandaJob.out
[2026-01-10 19:31:40] -rw-------. 1 boincer umatlas        57 Jan 10 18:03 setup.sh.local
[2026-01-10 19:31:40] -rw-------. 1 boincer umatlas    989548 Jan 10 18:03 agis_schedconf.cvmfs.json
[2026-01-10 19:31:40] -rw-------. 1 boincer umatlas   1516240 Jan 10 18:03 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:31:40] drwx------. 5 boincer umatlas      4096 Jan 10 18:04 pilot3
[2026-01-10 19:31:40] -rw-r--r--. 1 boincer umatlas       530 Jan 10 19:15 boinc_task_state.xml
[2026-01-10 19:31:40] -rw-r--r--. 1 boincer umatlas      6865 Jan 10 19:27 init_data.xml
[2026-01-10 19:31:40] -rw-------. 1 boincer umatlas  45241986 Jan 10 19:30 HITS.47962010._002640.pool.root.1
[2026-01-10 19:31:40] -rw-------. 1 boincer umatlas      1045 Jan 10 19:30 memory_monitor_summary.json
[2026-01-10 19:31:40] -rw-------. 1 boincer umatlas   1316956 Jan 10 19:30 log.47962010._002640.job.log.tgz.1
[2026-01-10 19:31:40] -rw-------. 1 boincer umatlas      8570 Jan 10 19:31 heartbeat.json
[2026-01-10 19:31:40] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 19:31 boinc_mmap_file
[2026-01-10 19:31:40] -rw-r--r--. 1 boincer umatlas        27 Jan 10 19:31 wrapper_checkpoint.txt
[2026-01-10 19:31:40] -rw-------. 1 boincer umatlas        95 Jan 10 19:31 pilot_heartbeat.json
[2026-01-10 19:31:40] -rw-------. 1 boincer umatlas       822 Jan 10 19:31 pilotlog.txt
[2026-01-10 19:31:40] -rw-------. 1 boincer umatlas    657894 Jan 10 19:31 log.47962010._002640.job.log.1
[2026-01-10 19:31:40] -rw-------. 1 boincer umatlas       353 Jan 10 19:31 output.list
[2026-01-10 19:31:40] -rw-r--r--. 1 boincer umatlas       620 Jan 10 19:31 runtime_log
[2026-01-10 19:31:40] -rw-------. 1 boincer umatlas   1996800 Jan 10 19:31 result.tar.gz
[2026-01-10 19:31:40] -rw-r--r--. 1 boincer umatlas      9342 Jan 10 19:31 runtime_log.err
[2026-01-10 19:31:40] -rw-------. 1 boincer umatlas       652 Jan 10 19:31 HltNDmD9wy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTdhKDmMuCd9m.diag
[2026-01-10 19:31:40] -rw-r--r--. 1 boincer umatlas     22592 Jan 10 19:31 stderr.txt
[2026-01-10 19:31:40] HITS file was successfully produced:
[2026-01-10 19:31:40] -rw-------. 1 boincer umatlas 45241986 Jan 10 19:30 shared/HITS.pool.root.1
[2026-01-10 19:31:40]  *** Contents of shared directory: ***
[2026-01-10 19:31:40] total 429328
[2026-01-10 19:31:40] -rw-r--r--. 2 boincer umatlas 391771826 Jan 10 18:03 ATLAS.root_0
[2026-01-10 19:31:40] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:03 start_atlas.sh
[2026-01-10 19:31:40] -rw-r--r--. 2 boincer umatlas    592613 Jan 10 18:03 input.tar.gz
[2026-01-10 19:31:40] -rw-------. 1 boincer umatlas  45241986 Jan 10 19:30 HITS.pool.root.1
[2026-01-10 19:31:40] -rw-------. 1 boincer umatlas   1996800 Jan 10 19:31 result.tar.gz
19:31:41 (229089): run_atlas exited; CPU time 15829.141440
19:31:41 (229089): called boinc_finish(0)

</stderr_txt>
]]>

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