Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:03:10 (222939): wrapper (7.7.26015): starting
18:03:10 (222939): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 18:03:10] Arguments: --nthreads 9
[2026-01-10 18:03:10] Threads: 9
[2026-01-10 18:03:10] Checking for CVMFS
[2026-01-10 18:03:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:03:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:03:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:03:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:03:12] 2.13.3.0 10787 24667 434836 154994 2 702 25730437 32935936 54285 16776704 0 255391116 99.801 115757732 27437 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 18:03:12] CVMFS is ok
[2026-01-10 18:03:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:03:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:03:12] Further information can be found at the LHC@home message board.
[2026-01-10 18:03:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:03:12] Checking for apptainer binary...
[2026-01-10 18:03:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:03:12] Running /usr/bin/apptainer --version
[2026-01-10 18:03:12] apptainer version 1.4.5-2.el9
[2026-01-10 18:03:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:03:12] lc-10-11.aglt2.org
[2026-01-10 18:03:12] apptainer works
[2026-01-10 18:03:12] Set ATHENA_PROC_NUMBER=9
[2026-01-10 18:03:12] Set ATHENA_CORE_NUMBER=9
[2026-01-10 18:03:13] Starting ATLAS job with PandaID=6965803253
[2026-01-10 18:03:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:35:17]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:35:17] 2026-01-11 00:34:19,259 | INFO     | preparing for final server update for job 6965803253 in state='finished'
[2026-01-10 19:35:17] 2026-01-11 00:34:19,259 | INFO     | this job has now completed (state=finished)
[2026-01-10 19:35:17] 2026-01-11 00:34:19,259 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 19:35:17] 2026-01-11 00:34:19,259 | INFO     | log transfer has been attempted: DONE
[2026-01-10 19:35:17] 2026-01-11 00:34:19,260 | INFO     | job 6965803253 has finished - writing final server update
[2026-01-10 19:35:17] 2026-01-11 00:34:19,260 | INFO     | total number of processed events: 50 (read)
[2026-01-10 19:35:17] 2026-01-11 00:34:19,271 | INFO     | executing command: lscpu
[2026-01-10 19:35:17] 2026-01-11 00:34:19,383 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 19:35:17] 2026-01-11 00:34:20,976 | INFO     | time since job start (5436s) is within the limit (349056.0s)
[2026-01-10 19:35:17] 2026-01-11 00:34:21,031 | INFO     | monitor loop #303: job 0:6965803253 is in state 'finished'
[2026-01-10 19:35:17] 2026-01-11 00:34:21,032 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:35:17] 2026-01-11 00:34:22,983 | INFO     | time since job start (5438s) is within the limit (349056.0s)
[2026-01-10 19:35:17] 2026-01-11 00:34:23,536 | INFO     | monitor loop #304: job 0:6965803253 is in state 'finished'
[2026-01-10 19:35:17] 2026-01-11 00:34:23,537 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:35:17] 2026-01-11 00:34:24,993 | INFO     | time since job start (5440s) is within the limit (349056.0s)
[2026-01-10 19:35:17] 2026-01-11 00:34:26,041 | INFO     | monitor loop #305: job 0:6965803253 is in state 'finished'
[2026-01-10 19:35:17] 2026-01-11 00:34:26,042 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:35:17] 2026-01-11 00:34:27,017 | INFO     | time since job start (5443s) is within the limit (349056.0s)
[2026-01-10 19:35:17] 2026-01-11 00:34:28,551 | INFO     | monitor loop #306: job 0:6965803253 is in state 'finished'
[2026-01-10 19:35:17] 2026-01-11 00:34:28,552 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:35:17] 2026-01-11 00:34:29,024 | INFO     | time since job start (5445s) is within the limit (349056.0s)
[2026-01-10 19:35:17] 2026-01-11 00:34:31,032 | INFO     | time since job start (5447s) is within the limit (349056.0s)
[2026-01-10 19:35:17] 2026-01-11 00:34:31,056 | INFO     | monitor loop #307: job 0:6965803253 is in state 'finished'
[2026-01-10 19:35:17] 2026-01-11 00:34:31,057 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:35:17] 2026-01-11 00:34:33,038 | INFO     | time since job start (5449s) is within the limit (349056.0s)
[2026-01-10 19:35:17] 2026-01-11 00:34:33,562 | INFO     | monitor loop #308: job 0:6965803253 is in state 'finished'
[2026-01-10 19:35:17] 2026-01-11 00:34:33,563 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:35:17] 2026-01-11 00:34:35,045 | INFO     | time since job start (5451s) is within the limit (349056.0s)
[2026-01-10 19:35:17] 2026-01-11 00:34:36,071 | INFO     | monitor loop #309: job 0:6965803253 is in state 'finished'
[2026-01-10 19:35:17] 2026-01-11 00:34:36,072 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:35:17] 2026-01-11 00:34:37,052 | INFO     | time since job start (5453s) is within the limit (349056.0s)
[2026-01-10 19:35:17] 2026-01-11 00:34:38,591 | INFO     | monitor loop #310: job 0:6965803253 is in state 'finished'
[2026-01-10 19:35:17] 2026-01-11 00:34:38,592 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:35:17] 2026-01-11 00:34:39,059 | INFO     | time since job start (5455s) is within the limit (349056.0s)
[2026-01-10 19:35:17] 2026-01-11 00:34:41,124 | INFO     | monitor loop #311: job 0:6965803253 is in state 'finished'
[2026-01-10 19:35:17] 2026-01-11 00:34:41,124 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:35:17] 2026-01-11 00:34:41,918 | INFO     | PID=236051 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 19:35:17] 2026-01-11 00:34:41,919 | INFO     | .. there are 80 such processes running
[2026-01-10 19:35:17] 2026-01-11 00:34:42,922 | INFO     | time since job start (5458s) is within the limit (349056.0s)
[2026-01-10 19:35:17] 2026-01-11 00:34:43,267 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 19:35:17] 2026-01-11 00:34:43,277 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2841.6623020833326
[2026-01-10 19:35:17] 2026-01-11 00:34:43,295 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965803253/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:35:17] 2026-01-11 00:34:43,297 | INFO     | extracted standard info from prmon json
[2026-01-10 19:35:17] 2026-01-11 00:34:43,297 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:35:17] 2026-01-11 00:34:43,297 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:35:17] 2026-01-11 00:34:43,299 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:35:17] 2026-01-11 00:34:43,300 | INFO     | sum of square deviations: 164728787.5555552
[2026-01-10 19:35:17] 2026-01-11 00:34:43,301 | INFO     | sum of deviations: -5534175757.962964
[2026-01-10 19:35:17] 2026-01-11 00:34:43,301 | INFO     | mean x: 1768089037.2592592
[2026-01-10 19:35:17] 2026-01-11 00:34:43,301 | INFO     | mean y: 2575318.950617284
[2026-01-10 19:35:17] 2026-01-11 00:34:43,301 | INFO     | intersect: 59402730162.0759
[2026-01-10 19:35:17] 2026-01-11 00:34:43,301 | INFO     | chi2: 1.8033236273386652
[2026-01-10 19:35:17] 2026-01-11 00:34:43,302 | INFO     | current memory leak: -33.60 B/s (using 81 data points, chi2=1.80)
[2026-01-10 19:35:17] 2026-01-11 00:34:43,302 | INFO     | could have reported an average CPU frequency of 2842 MHz (6 samples)
[2026-01-10 19:35:17] 2026-01-11 00:34:43,302 | INFO     | ..............................
[2026-01-10 19:35:17] 2026-01-11 00:34:43,302 | INFO     | . Timing measurements:
[2026-01-10 19:35:17] 2026-01-11 00:34:43,302 | INFO     | . get job = 0 s
[2026-01-10 19:35:17] 2026-01-11 00:34:43,302 | INFO     | . initial setup = 4 s
[2026-01-10 19:35:17] 2026-01-11 00:34:43,302 | INFO     | . payload setup = 16 s
[2026-01-10 19:35:17] 2026-01-11 00:34:43,303 | INFO     | . stage-in = 0 s
[2026-01-10 19:35:17] 2026-01-11 00:34:43,303 | INFO     | . payload execution = 5371 s
[2026-01-10 19:35:17] 2026-01-11 00:34:43,303 | INFO     | . stage-out = 3 s
[2026-01-10 19:35:17] 2026-01-11 00:34:43,303 | INFO     | . log creation = 0 s
[2026-01-10 19:35:17] 2026-01-11 00:34:43,303 | INFO     | ..............................
[2026-01-10 19:35:17] 2026-01-11 00:34:43,423 | INFO     | 
[2026-01-10 19:35:17] 2026-01-11 00:34:43,424 | INFO     | job summary report
[2026-01-10 19:35:17] 2026-01-11 00:34:43,424 | INFO     | --------------------------------------------------
[2026-01-10 19:35:17] 2026-01-11 00:34:43,424 | INFO     | PanDA job id: 6965803253
[2026-01-10 19:35:17] 2026-01-11 00:34:43,424 | INFO     | task id: 47962010
[2026-01-10 19:35:17] 2026-01-11 00:34:43,424 | INFO     | errors: (none)
[2026-01-10 19:35:17] 2026-01-11 00:34:43,424 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:35:17] 2026-01-11 00:34:43,424 | INFO     | pilot state: finished 
[2026-01-10 19:35:17] 2026-01-11 00:34:43,424 | INFO     | transexitcode: 0
[2026-01-10 19:35:17] 2026-01-11 00:34:43,424 | INFO     | exeerrorcode: 0
[2026-01-10 19:35:17] 2026-01-11 00:34:43,424 | INFO     | exeerrordiag: 
[2026-01-10 19:35:17] 2026-01-11 00:34:43,424 | INFO     | exitcode: 0
[2026-01-10 19:35:17] 2026-01-11 00:34:43,424 | INFO     | exitmsg: OK
[2026-01-10 19:35:17] 2026-01-11 00:34:43,424 | INFO     | cpuconsumptiontime: 17122 s
[2026-01-10 19:35:17] 2026-01-11 00:34:43,424 | INFO     | nevents: 50
[2026-01-10 19:35:17] 2026-01-11 00:34:43,425 | INFO     | neventsw: 0
[2026-01-10 19:35:17] 2026-01-11 00:34:43,425 | INFO     | pid: 275983
[2026-01-10 19:35:17] 2026-01-11 00:34:43,425 | INFO     | pgrp: 275983
[2026-01-10 19:35:17] 2026-01-11 00:34:43,425 | INFO     | corecount: 9
[2026-01-10 19:35:17] 2026-01-11 00:34:43,425 | INFO     | event service: False
[2026-01-10 19:35:17] 2026-01-11 00:34:43,425 | INFO     | sizes: {0: 2284398, 1: 2284597, 12: 2284597, 16: 2284887, 22: 2284915, 5392: 2312215, 5393: 2312342, 5396: 2321392, 5398: 2321448, 5424: 2321694}
[2026-01-10 19:35:17] 2026-01-11 00:34:43,425 | INFO     | --------------------------------------------------
[2026-01-10 19:35:17] 2026-01-11 00:34:43,425 | INFO     | 
[2026-01-10 19:35:17] 2026-01-11 00:34:43,425 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 19:35:17] 2026-01-11 00:34:43,511 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:35:17] 2026-01-11 00:34:43,513 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:35:17] 2026-01-11 00:34:43,513 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:35:17] 2026-01-11 00:34:43,513 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:35:17] 2026-01-11 00:34:43,513 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:35:17] 2026-01-11 00:34:43,513 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:35:17] 2026-01-11 00:34:43,513 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:35:17] 2026-01-11 00:34:43,513 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:35:17] 2026-01-11 00:34:43,513 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:35:17] 2026-01-11 00:34:43,513 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:35:17] 2026-01-11 00:34:43,513 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:35:17] 2026-01-11 00:34:43,514 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:35:17] 2026-01-11 00:34:43,514 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:35:17] 2026-01-11 00:34:43,514 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:35:17] 2026-01-11 00:34:43,514 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:35:17] 2026-01-11 00:34:43,514 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:35:17] 2026-01-11 00:34:43,514 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:35:17] 2026-01-11 00:34:43,514 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:35:17] 2026-01-11 00:34:43,514 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:35:17] 2026-01-11 00:34:43,514 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:35:17] 2026-01-11 00:34:43,514 | INFO     | job 6965803253 has completed (purged errors)
[2026-01-10 19:35:17] 2026-01-11 00:34:43,515 | INFO     | overall cleanup function is called
[2026-01-10 19:35:17] 2026-01-11 00:34:44,538 | INFO     | --- collectZombieJob: --- 10, [275983]
[2026-01-10 19:35:17] 2026-01-11 00:34:44,539 | INFO     | zombie collector waiting for pid 275983
[2026-01-10 19:35:17] 2026-01-11 00:34:44,539 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:35:17] 2026-01-11 00:34:44,539 | INFO     | collected zombie processes
[2026-01-10 19:35:17] 2026-01-11 00:34:44,539 | INFO     | will attempt to kill all subprocesses of pid=275983
[2026-01-10 19:35:17] 2026-01-11 00:34:45,476 | INFO     | process IDs to be killed: [275983] (in reverse order)
[2026-01-10 19:35:17] 2026-01-11 00:34:45,969 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:35:17] 2026-01-11 00:34:45,974 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:35:17] 2026-01-11 00:34:46,086 | INFO     | did not find any defunct processes belonging to 275983
[2026-01-10 19:35:17] 2026-01-11 00:34:46,203 | INFO     | did not find any defunct processes belonging to 275983
[2026-01-10 19:35:17] 2026-01-11 00:34:46,203 | INFO     | ready for new job
[2026-01-10 19:35:17] 2026-01-11 00:34:46,203 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:35:17] 2026-01-11 00:34:46,205 | INFO     | ***************************************
[2026-01-10 19:35:17] 2026-01-11 00:34:46,205 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:35:17] 2026-01-11 00:34:46,205 | INFO     | ***************************************
[2026-01-10 19:35:17] 2026-01-11 00:34:46,205 | INFO     | 
[2026-01-10 19:35:17] 2026-01-11 00:34:46,231 | INFO     | architecture information:
[2026-01-10 19:35:17] 2026-01-11 00:34:46,231 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:35:17] 2026-01-11 00:34:46,310 | INFO     | cat /etc/os-release:
[2026-01-10 19:35:17] NAME="CentOS Linux"
[2026-01-10 19:35:17] VERSION="7 (Core)"
[2026-01-10 19:35:17] ID="centos"
[2026-01-10 19:35:17] ID_LIKE="rhel fedora"
[2026-01-10 19:35:17] VERSION_ID="7"
[2026-01-10 19:35:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:35:17] ANSI_COLOR="0;31"
[2026-01-10 19:35:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:35:17] HOME_URL="https://www.centos.org/"
[2026-01-10 19:35:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:35:17] 
[2026-01-10 19:35:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:35:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:35:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:35:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:35:17] 
[2026-01-10 19:35:17] 2026-01-11 00:34:46,310 | INFO     | ***************************************
[2026-01-10 19:35:17] 2026-01-11 00:34:46,813 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 19:35:17] 2026-01-11 00:34:46,888 | INFO     | sufficient remaining disk space (94479843328 B)
[2026-01-10 19:35:17] 2026-01-11 00:34:46,888 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:35:17] 2026-01-11 00:34:46,889 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:35:17] 2026-01-11 00:34:46,889 | INFO     | update_server=False
[2026-01-10 19:35:17] 2026-01-11 00:34:46,889 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:35:17] 2026-01-11 00:34:46,889 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:35:17] 2026-01-11 00:34:46,890 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:35:17] 2026-01-11 00:34:46,936 | INFO     | all job control threads have been joined
[2026-01-10 19:35:17] 2026-01-11 00:34:47,176 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:35:17] 2026-01-11 00:34:47,177 | INFO     | aborting loop
[2026-01-10 19:35:17] 2026-01-11 00:34:47,341 | INFO     | all payload control threads have been joined
[2026-01-10 19:35:17] 2026-01-11 00:34:47,775 | INFO     | all data control threads have been joined
[2026-01-10 19:35:17] 2026-01-11 00:34:47,895 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:35:17] 2026-01-11 00:34:47,936 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:35:17] 2026-01-11 00:34:47,952 | INFO     | [job] control thread has finished
[2026-01-10 19:35:17] 2026-01-11 00:34:48,148 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:35:17] 2026-01-11 00:34:48,168 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:35:17] 2026-01-11 00:34:48,182 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:35:17] 2026-01-11 00:34:48,208 | INFO     | [job] validate thread has finished
[2026-01-10 19:35:17] 2026-01-11 00:34:48,347 | INFO     | [payload] control thread has finished
[2026-01-10 19:35:17] 2026-01-11 00:34:48,436 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:35:17] 2026-01-11 00:34:48,781 | INFO     | [data] control thread has finished
[2026-01-10 19:35:17] 2026-01-11 00:34:48,905 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:35:17] 2026-01-11 00:34:48,946 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:35:17] 2026-01-11 00:34:49,007 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:35:17] 2026-01-11 00:34:49,179 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:35:17] 2026-01-11 00:34:49,445 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:35:17] 2026-01-11 00:34:50,912 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:35:17] 2026-01-11 00:34:53,855 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:35:17] 2026-01-11 00:34:57,939 | INFO     | job.realtimelogging is not enabled
[2026-01-10 19:35:17] 2026-01-11 00:34:58,945 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:35:17] 2026-01-11 00:35:00,687 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140604300298048)>', '<ExcThread(monitor, started 140603916535552)>']
[2026-01-10 19:35:17] 2026-01-11 00:35:05,718 | INFO     | all workflow threads have been joined
[2026-01-10 19:35:17] 2026-01-11 00:35:05,719 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:35:17] 2026-01-11 00:35:05,719 | INFO     | traces error code: 0
[2026-01-10 19:35:17] 2026-01-11 00:35:05,719 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:35:17] 2026-01-11 00:35:17,084 | INFO     | PID=236051 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 19:35:17] 2026-01-11 00:35:17,085 | INFO     | .. there are 80 such processes running
[2026-01-10 19:35:17] 2026-01-11 00:35:17,085 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:35:17] 2026-01-11 00:35:17,085 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:35:17] 2026-01-11 00:35:17,086 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:35:17] 2026-01-11 00:35:17,086 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:35:17] 2026-01-11 00:35:17,086 | INFO     | [monitor] control thread has ended
[2026-01-10 19:35:17] 2026-01-11 00:35:17,522 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:35:17] 2026-01-11 00:35:17,531 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:35:17] 2026-01-11 00:35:17,536 [wrapper] pilotpid: 236051
[2026-01-10 19:35:17] 2026-01-11 00:35:17,547 [wrapper] Pilot exit status: 0
[2026-01-10 19:35:17] 2026-01-11 00:35:17,579 [wrapper] pandaids: 6965803253
[2026-01-10 19:35:17] 2026-01-11 00:35:17,798 [wrapper] cleanup supervisor_pilot 1335759 236052
[2026-01-10 19:35:17] 2026-01-11 00:35:17,807 [wrapper] Test setup, not cleaning
[2026-01-10 19:35:17] 2026-01-11 00:35:17,812 [wrapper] apfmon messages muted
[2026-01-10 19:35:17] 2026-01-11 00:35:17,819 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:35:17] 2026-01-11 00:35:17,824 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:35:17]  *** Error codes and diagnostics ***
[2026-01-10 19:35:17]     "exeErrorCode": 0,
[2026-01-10 19:35:17]     "exeErrorDiag": "",
[2026-01-10 19:35:17]     "pilotErrorCode": 0,
[2026-01-10 19:35:17]     "pilotErrorDiag": "",
[2026-01-10 19:35:17]  *** Listing of results directory ***
[2026-01-10 19:35:17] total 435704
[2026-01-10 19:35:17] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 19:35:17] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:01 queuedata.json
[2026-01-10 19:35:17] -rwx------. 1 boincer umatlas     36322 Jan 10 18:02 runpilot2-wrapper.sh
[2026-01-10 19:35:17] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:35:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:03 run_atlas
[2026-01-10 19:35:17] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:03 job.xml
[2026-01-10 19:35:17] -rw-r--r--. 2 boincer umatlas 391722418 Jan 10 18:03 EVNT.47962006._000066.pool.root.1
[2026-01-10 19:35:17] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:03 start_atlas.sh
[2026-01-10 19:35:17] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:03 shared
[2026-01-10 19:35:17] -rw-r--r--. 2 boincer umatlas    592621 Jan 10 18:03 input.tar.gz
[2026-01-10 19:35:17] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:03 boinc_lockfile
[2026-01-10 19:35:17] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 18:03 pandaJob.out
[2026-01-10 19:35:17] -rw-------. 1 boincer umatlas        57 Jan 10 18:03 setup.sh.local
[2026-01-10 19:35:17] -rw-------. 1 boincer umatlas    989548 Jan 10 18:03 agis_schedconf.cvmfs.json
[2026-01-10 19:35:17] -rw-------. 1 boincer umatlas   1516240 Jan 10 18:03 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:35:17] drwx------. 5 boincer umatlas      4096 Jan 10 18:03 pilot3
[2026-01-10 19:35:17] -rw-r--r--. 1 boincer umatlas       529 Jan 10 19:20 boinc_task_state.xml
[2026-01-10 19:35:17] -rw-r--r--. 1 boincer umatlas      6865 Jan 10 19:27 init_data.xml
[2026-01-10 19:35:17] -rw-------. 1 boincer umatlas  46502689 Jan 10 19:33 HITS.47962010._002705.pool.root.1
[2026-01-10 19:35:17] -rw-------. 1 boincer umatlas      1046 Jan 10 19:34 memory_monitor_summary.json
[2026-01-10 19:35:17] -rw-------. 1 boincer umatlas   1314840 Jan 10 19:34 log.47962010._002705.job.log.tgz.1
[2026-01-10 19:35:17] -rw-------. 1 boincer umatlas      8588 Jan 10 19:34 heartbeat.json
[2026-01-10 19:35:17] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 19:35 boinc_mmap_file
[2026-01-10 19:35:17] -rw-r--r--. 1 boincer umatlas        27 Jan 10 19:35 wrapper_checkpoint.txt
[2026-01-10 19:35:17] -rw-------. 1 boincer umatlas        95 Jan 10 19:35 pilot_heartbeat.json
[2026-01-10 19:35:17] -rw-------. 1 boincer umatlas       822 Jan 10 19:35 pilotlog.txt
[2026-01-10 19:35:17] -rw-------. 1 boincer umatlas    692919 Jan 10 19:35 log.47962010._002705.job.log.1
[2026-01-10 19:35:17] -rw-------. 1 boincer umatlas       353 Jan 10 19:35 output.list
[2026-01-10 19:35:17] -rw-r--r--. 1 boincer umatlas       620 Jan 10 19:35 runtime_log
[2026-01-10 19:35:17] -rw-------. 1 boincer umatlas   2027520 Jan 10 19:35 result.tar.gz
[2026-01-10 19:35:17] -rw-------. 1 boincer umatlas       652 Jan 10 19:35 vF4NDmD9wy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZdhKDmTTvujn.diag
[2026-01-10 19:35:17] -rw-r--r--. 1 boincer umatlas      9342 Jan 10 19:35 runtime_log.err
[2026-01-10 19:35:17] -rw-r--r--. 1 boincer umatlas     22420 Jan 10 19:35 stderr.txt
[2026-01-10 19:35:17] HITS file was successfully produced:
[2026-01-10 19:35:17] -rw-------. 1 boincer umatlas 46502689 Jan 10 19:33 shared/HITS.pool.root.1
[2026-01-10 19:35:17]  *** Contents of shared directory: ***
[2026-01-10 19:35:17] total 430540
[2026-01-10 19:35:17] -rw-r--r--. 2 boincer umatlas 391722418 Jan 10 18:03 ATLAS.root_0
[2026-01-10 19:35:17] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:03 start_atlas.sh
[2026-01-10 19:35:17] -rw-r--r--. 2 boincer umatlas    592621 Jan 10 18:03 input.tar.gz
[2026-01-10 19:35:17] -rw-------. 1 boincer umatlas  46502689 Jan 10 19:33 HITS.pool.root.1
[2026-01-10 19:35:17] -rw-------. 1 boincer umatlas   2027520 Jan 10 19:35 result.tar.gz
19:35:19 (222939): run_atlas exited; CPU time 17378.493330
19:35:19 (222939): called boinc_finish(0)

</stderr_txt>
]]>

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