Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:02:55 (217208): wrapper (7.7.26015): starting
18:02:55 (217208): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 18:02:55] Arguments: --nthreads 9
[2026-01-10 18:02:55] Threads: 9
[2026-01-10 18:02:55] Checking for CVMFS
[2026-01-10 18:02:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:02:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:02:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:02:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:02:57] 2.13.3.0 10787 24667 434856 154994 3 702 25730405 32935936 53864 16776704 0 255378966 99.801 115757732 27437 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 18:02:57] CVMFS is ok
[2026-01-10 18:02:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:02:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:02:57] Further information can be found at the LHC@home message board.
[2026-01-10 18:02:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:02:57] Checking for apptainer binary...
[2026-01-10 18:02:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:02:57] Running /usr/bin/apptainer --version
[2026-01-10 18:02:57] apptainer version 1.4.5-2.el9
[2026-01-10 18:02:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:02:57] lc-10-11.aglt2.org
[2026-01-10 18:02:57] apptainer works
[2026-01-10 18:02:57] Set ATHENA_PROC_NUMBER=9
[2026-01-10 18:02:57] Set ATHENA_CORE_NUMBER=9
[2026-01-10 18:02:57] Starting ATLAS job with PandaID=6965803226
[2026-01-10 18:02:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:36:01]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:36:01] 2026-01-11 00:34:40,419 | INFO     | preparing for final server update for job 6965803226 in state='finished'
[2026-01-10 19:36:01] 2026-01-11 00:34:40,577 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-10 19:36:01] 2026-01-11 00:34:40,578 | INFO     | this job has now completed (state=finished)
[2026-01-10 19:36:01] 2026-01-11 00:34:40,578 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 19:36:01] 2026-01-11 00:34:40,578 | INFO     | log transfer has been attempted: DONE
[2026-01-10 19:36:01] 2026-01-11 00:34:40,578 | INFO     | job 6965803226 has finished - writing final server update
[2026-01-10 19:36:01] 2026-01-11 00:34:40,578 | INFO     | total number of processed events: 50 (read)
[2026-01-10 19:36:01] 2026-01-11 00:34:40,588 | INFO     | executing command: lscpu
[2026-01-10 19:36:01] 2026-01-11 00:34:40,788 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 19:36:01] 2026-01-11 00:34:41,396 | INFO     | time since job start (5475s) is within the limit (349056.0s)
[2026-01-10 19:36:01] 2026-01-11 00:34:41,915 | INFO     | monitor loop #306: job 0:6965803226 is in state 'finished'
[2026-01-10 19:36:01] 2026-01-11 00:34:41,916 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:36:01] 2026-01-11 00:34:43,405 | INFO     | time since job start (5477s) is within the limit (349056.0s)
[2026-01-10 19:36:01] 2026-01-11 00:34:44,420 | INFO     | monitor loop #307: job 0:6965803226 is in state 'finished'
[2026-01-10 19:36:01] 2026-01-11 00:34:44,421 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:36:01] 2026-01-11 00:34:45,411 | INFO     | time since job start (5479s) is within the limit (349056.0s)
[2026-01-10 19:36:01] 2026-01-11 00:34:46,939 | INFO     | monitor loop #308: job 0:6965803226 is in state 'finished'
[2026-01-10 19:36:01] 2026-01-11 00:34:46,939 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:36:01] 2026-01-11 00:34:47,421 | INFO     | time since job start (5481s) is within the limit (349056.0s)
[2026-01-10 19:36:01] 2026-01-11 00:34:49,438 | INFO     | time since job start (5483s) is within the limit (349056.0s)
[2026-01-10 19:36:01] 2026-01-11 00:34:49,444 | INFO     | monitor loop #309: job 0:6965803226 is in state 'finished'
[2026-01-10 19:36:01] 2026-01-11 00:34:49,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:36:01] 2026-01-11 00:34:51,456 | INFO     | time since job start (5485s) is within the limit (349056.0s)
[2026-01-10 19:36:01] 2026-01-11 00:34:51,948 | INFO     | monitor loop #310: job 0:6965803226 is in state 'finished'
[2026-01-10 19:36:01] 2026-01-11 00:34:51,949 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:36:01] 2026-01-11 00:34:53,464 | INFO     | time since job start (5487s) is within the limit (349056.0s)
[2026-01-10 19:36:01] 2026-01-11 00:34:54,480 | INFO     | monitor loop #311: job 0:6965803226 is in state 'finished'
[2026-01-10 19:36:01] 2026-01-11 00:34:54,481 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:36:01] 2026-01-11 00:34:55,470 | INFO     | time since job start (5489s) is within the limit (349056.0s)
[2026-01-10 19:36:01] 2026-01-11 00:34:56,985 | INFO     | monitor loop #312: job 0:6965803226 is in state 'finished'
[2026-01-10 19:36:01] 2026-01-11 00:34:56,986 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:36:01] 2026-01-11 00:34:57,476 | INFO     | time since job start (5491s) is within the limit (349056.0s)
[2026-01-10 19:36:01] 2026-01-11 00:34:59,483 | INFO     | time since job start (5493s) is within the limit (349056.0s)
[2026-01-10 19:36:01] 2026-01-11 00:34:59,505 | INFO     | monitor loop #313: job 0:6965803226 is in state 'finished'
[2026-01-10 19:36:01] 2026-01-11 00:34:59,506 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:36:01] 2026-01-11 00:35:01,196 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 19:36:01] 2026-01-11 00:35:01,209 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2832.3468020833334
[2026-01-10 19:36:01] 2026-01-11 00:35:01,267 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965803226/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:36:01] 2026-01-11 00:35:01,268 | INFO     | extracted standard info from prmon json
[2026-01-10 19:36:01] 2026-01-11 00:35:01,268 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:36:01] 2026-01-11 00:35:01,268 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:36:01] 2026-01-11 00:35:01,274 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:36:01] 2026-01-11 00:35:01,275 | INFO     | sum of square deviations: 170992335.6219512
[2026-01-10 19:36:01] 2026-01-11 00:35:01,275 | INFO     | sum of deviations: -5622480801.658535
[2026-01-10 19:36:01] 2026-01-11 00:35:01,275 | INFO     | mean x: 1768089053.7439024
[2026-01-10 19:36:01] 2026-01-11 00:35:01,275 | INFO     | mean y: 2556475.6829268294
[2026-01-10 19:36:01] 2026-01-11 00:35:01,275 | INFO     | intersect: 58139938622.89486
[2026-01-10 19:36:01] 2026-01-11 00:35:01,276 | INFO     | chi2: 1.7043982126862907
[2026-01-10 19:36:01] 2026-01-11 00:35:01,276 | INFO     | current memory leak: -32.88 B/s (using 82 data points, chi2=1.70)
[2026-01-10 19:36:01] 2026-01-11 00:35:01,276 | INFO     | could have reported an average CPU frequency of 2832 MHz (6 samples)
[2026-01-10 19:36:01] 2026-01-11 00:35:01,280 | INFO     | ..............................
[2026-01-10 19:36:01] 2026-01-11 00:35:01,281 | INFO     | . Timing measurements:
[2026-01-10 19:36:01] 2026-01-11 00:35:01,281 | INFO     | . get job = 0 s
[2026-01-10 19:36:01] 2026-01-11 00:35:01,281 | INFO     | . initial setup = 4 s
[2026-01-10 19:36:01] 2026-01-11 00:35:01,281 | INFO     | . payload setup = 18 s
[2026-01-10 19:36:01] 2026-01-11 00:35:01,281 | INFO     | . stage-in = 0 s
[2026-01-10 19:36:01] 2026-01-11 00:35:01,281 | INFO     | . payload execution = 5407 s
[2026-01-10 19:36:01] 2026-01-11 00:35:01,281 | INFO     | . stage-out = 2 s
[2026-01-10 19:36:01] 2026-01-11 00:35:01,281 | INFO     | . log creation = 0 s
[2026-01-10 19:36:01] 2026-01-11 00:35:01,281 | INFO     | ..............................
[2026-01-10 19:36:01] 2026-01-11 00:35:01,431 | INFO     | 
[2026-01-10 19:36:01] 2026-01-11 00:35:01,431 | INFO     | job summary report
[2026-01-10 19:36:01] 2026-01-11 00:35:01,431 | INFO     | --------------------------------------------------
[2026-01-10 19:36:01] 2026-01-11 00:35:01,431 | INFO     | PanDA job id: 6965803226
[2026-01-10 19:36:01] 2026-01-11 00:35:01,431 | INFO     | task id: 47962010
[2026-01-10 19:36:01] 2026-01-11 00:35:01,432 | INFO     | errors: (none)
[2026-01-10 19:36:01] 2026-01-11 00:35:01,432 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:36:01] 2026-01-11 00:35:01,432 | INFO     | pilot state: finished 
[2026-01-10 19:36:01] 2026-01-11 00:35:01,432 | INFO     | transexitcode: 0
[2026-01-10 19:36:01] 2026-01-11 00:35:01,432 | INFO     | exeerrorcode: 0
[2026-01-10 19:36:01] 2026-01-11 00:35:01,432 | INFO     | exeerrordiag: 
[2026-01-10 19:36:01] 2026-01-11 00:35:01,432 | INFO     | exitcode: 0
[2026-01-10 19:36:01] 2026-01-11 00:35:01,432 | INFO     | exitmsg: OK
[2026-01-10 19:36:01] 2026-01-11 00:35:01,432 | INFO     | cpuconsumptiontime: 16815 s
[2026-01-10 19:36:01] 2026-01-11 00:35:01,432 | INFO     | nevents: 50
[2026-01-10 19:36:01] 2026-01-11 00:35:01,432 | INFO     | neventsw: 0
[2026-01-10 19:36:01] 2026-01-11 00:35:01,432 | INFO     | pid: 262577
[2026-01-10 19:36:01] 2026-01-11 00:35:01,432 | INFO     | pgrp: 262577
[2026-01-10 19:36:01] 2026-01-11 00:35:01,432 | INFO     | corecount: 9
[2026-01-10 19:36:01] 2026-01-11 00:35:01,433 | INFO     | event service: False
[2026-01-10 19:36:01] 2026-01-11 00:35:01,433 | INFO     | sizes: {0: 2284342, 1: 2284426, 2: 2284625, 13: 2284625, 18: 2284943, 24: 2284971, 5429: 2312291, 5430: 2312290, 5433: 2321340, 5434: 2321396, 5456: 2321642}
[2026-01-10 19:36:01] 2026-01-11 00:35:01,433 | INFO     | --------------------------------------------------
[2026-01-10 19:36:01] 2026-01-11 00:35:01,433 | INFO     | 
[2026-01-10 19:36:01] 2026-01-11 00:35:01,433 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 19:36:01] 2026-01-11 00:35:01,491 | INFO     | time since job start (5495s) is within the limit (349056.0s)
[2026-01-10 19:36:01] 2026-01-11 00:35:01,516 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:36:01] 2026-01-11 00:35:01,517 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:36:01] 2026-01-11 00:35:01,517 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:36:01] 2026-01-11 00:35:01,517 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:36:01] 2026-01-11 00:35:01,517 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:36:01] 2026-01-11 00:35:01,517 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:36:01] 2026-01-11 00:35:01,517 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:36:01] 2026-01-11 00:35:01,517 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:36:01] 2026-01-11 00:35:01,517 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:36:01] 2026-01-11 00:35:01,517 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:36:01] 2026-01-11 00:35:01,517 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:36:01] 2026-01-11 00:35:01,518 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:36:01] 2026-01-11 00:35:01,518 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:36:01] 2026-01-11 00:35:01,518 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:36:01] 2026-01-11 00:35:01,518 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:36:01] 2026-01-11 00:35:01,518 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:36:01] 2026-01-11 00:35:01,518 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:36:01] 2026-01-11 00:35:01,518 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:36:01] 2026-01-11 00:35:01,518 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:36:01] 2026-01-11 00:35:01,518 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:36:01] 2026-01-11 00:35:01,518 | INFO     | job 6965803226 has completed (purged errors)
[2026-01-10 19:36:01] 2026-01-11 00:35:01,518 | INFO     | overall cleanup function is called
[2026-01-10 19:36:01] 2026-01-11 00:35:02,577 | INFO     | --- collectZombieJob: --- 10, [262577]
[2026-01-10 19:36:01] 2026-01-11 00:35:02,578 | INFO     | zombie collector waiting for pid 262577
[2026-01-10 19:36:01] 2026-01-11 00:35:02,578 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:36:01] 2026-01-11 00:35:02,578 | INFO     | collected zombie processes
[2026-01-10 19:36:01] 2026-01-11 00:35:02,578 | INFO     | will attempt to kill all subprocesses of pid=262577
[2026-01-10 19:36:01] 2026-01-11 00:35:05,859 | INFO     | PID=228316 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 19:36:01] 2026-01-11 00:35:05,868 | INFO     | .. there are 80 such processes running
[2026-01-10 19:36:01] 2026-01-11 00:35:05,885 | INFO     | process IDs to be killed: [262577] (in reverse order)
[2026-01-10 19:36:01] 2026-01-11 00:35:06,135 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:36:01] 2026-01-11 00:35:06,136 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:36:01] 2026-01-11 00:35:06,162 | INFO     | did not find any defunct processes belonging to 262577
[2026-01-10 19:36:01] 2026-01-11 00:35:06,189 | INFO     | did not find any defunct processes belonging to 262577
[2026-01-10 19:36:01] 2026-01-11 00:35:06,190 | INFO     | ready for new job
[2026-01-10 19:36:01] 2026-01-11 00:35:06,190 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:36:01] 2026-01-11 00:35:06,191 | INFO     | ***************************************
[2026-01-10 19:36:01] 2026-01-11 00:35:06,205 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:36:01] 2026-01-11 00:35:06,206 | INFO     | ***************************************
[2026-01-10 19:36:01] 2026-01-11 00:35:06,206 | INFO     | 
[2026-01-10 19:36:01] 2026-01-11 00:35:06,216 | INFO     | architecture information:
[2026-01-10 19:36:01] 2026-01-11 00:35:06,216 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:36:01] 2026-01-11 00:35:06,303 | INFO     | cat /etc/os-release:
[2026-01-10 19:36:01] NAME="CentOS Linux"
[2026-01-10 19:36:01] VERSION="7 (Core)"
[2026-01-10 19:36:01] ID="centos"
[2026-01-10 19:36:01] ID_LIKE="rhel fedora"
[2026-01-10 19:36:01] VERSION_ID="7"
[2026-01-10 19:36:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:36:01] ANSI_COLOR="0;31"
[2026-01-10 19:36:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:36:01] HOME_URL="https://www.centos.org/"
[2026-01-10 19:36:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:36:01] 
[2026-01-10 19:36:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:36:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:36:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:36:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:36:01] 
[2026-01-10 19:36:01] 2026-01-11 00:35:06,304 | INFO     | ***************************************
[2026-01-10 19:36:01] 2026-01-11 00:35:06,828 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 19:36:01] 2026-01-11 00:35:06,877 | INFO     | sufficient remaining disk space (94488231936 B)
[2026-01-10 19:36:01] 2026-01-11 00:35:06,877 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:36:01] 2026-01-11 00:35:06,877 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:36:01] 2026-01-11 00:35:06,877 | INFO     | update_server=False
[2026-01-10 19:36:01] 2026-01-11 00:35:06,877 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:36:01] 2026-01-11 00:35:06,878 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:36:01] 2026-01-11 00:35:07,007 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:36:01] 2026-01-11 00:35:07,139 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 19:36:01] 2026-01-11 00:35:07,140 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 19:36:01] 2026-01-11 00:35:07,140 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:36:01] 2026-01-11 00:35:07,140 | INFO     | will abort loop
[2026-01-10 19:36:01] 2026-01-11 00:35:07,240 | INFO     | all data control threads have been joined
[2026-01-10 19:36:01] 2026-01-11 00:35:07,883 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:36:01] 2026-01-11 00:35:07,884 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:36:01] 2026-01-11 00:35:07,891 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:36:01] 2026-01-11 00:35:07,897 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:36:01] 2026-01-11 00:35:07,962 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:36:01] 2026-01-11 00:35:08,029 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:36:01] 2026-01-11 00:35:08,086 | INFO     | all payload control threads have been joined
[2026-01-10 19:36:01] 2026-01-11 00:35:08,137 | INFO     | all job control threads have been joined
[2026-01-10 19:36:01] 2026-01-11 00:35:08,145 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:36:01] 2026-01-11 00:35:08,246 | INFO     | [data] control thread has finished
[2026-01-10 19:36:01] 2026-01-11 00:35:08,293 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:36:01] 2026-01-11 00:35:08,460 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:36:01] 2026-01-11 00:35:08,691 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:36:01] 2026-01-11 00:35:09,007 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:36:01] 2026-01-11 00:35:09,013 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:36:01] 2026-01-11 00:35:09,074 | INFO     | [job] validate thread has finished
[2026-01-10 19:36:01] 2026-01-11 00:35:09,091 | INFO     | [payload] control thread has finished
[2026-01-10 19:36:01] 2026-01-11 00:35:09,145 | INFO     | [job] control thread has finished
[2026-01-10 19:36:01] 2026-01-11 00:35:12,302 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:36:01] 2026-01-11 00:35:35,588 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:36:01] 2026-01-11 00:35:35,658 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139848046696256)>', '<ExcThread(monitor, started 139847658354432)>']
[2026-01-10 19:36:01] 2026-01-11 00:35:39,141 | INFO     | PID=228316 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 19:36:01] 2026-01-11 00:35:39,141 | INFO     | .. there are 79 such processes running
[2026-01-10 19:36:01] 2026-01-11 00:35:39,142 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:36:01] 2026-01-11 00:35:39,142 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:36:01] 2026-01-11 00:35:39,142 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:36:01] 2026-01-11 00:35:39,142 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:36:01] 2026-01-11 00:35:39,142 | INFO     | [monitor] control thread has ended
[2026-01-10 19:36:01] 2026-01-11 00:35:40,692 | INFO     | all workflow threads have been joined
[2026-01-10 19:36:01] 2026-01-11 00:35:40,693 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:36:01] 2026-01-11 00:35:40,693 | INFO     | traces error code: 0
[2026-01-10 19:36:01] 2026-01-11 00:35:40,693 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:36:01] 2026-01-11 00:35:41,015 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:36:01] 2026-01-11 00:35:41,017 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:36:01] 2026-01-11 00:35:41,024 [wrapper] pilotpid: 228316
[2026-01-10 19:36:01] 2026-01-11 00:35:41,028 [wrapper] Pilot exit status: 0
[2026-01-10 19:36:01] 2026-01-11 00:35:41,038 [wrapper] pandaids: 6965803226
[2026-01-10 19:36:01] 2026-01-11 00:35:41,209 [wrapper] cleanup supervisor_pilot 1332344 228317
[2026-01-10 19:36:01] 2026-01-11 00:35:41,214 [wrapper] Test setup, not cleaning
[2026-01-10 19:36:01] 2026-01-11 00:35:41,220 [wrapper] apfmon messages muted
[2026-01-10 19:36:01] 2026-01-11 00:35:41,225 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:36:01] 2026-01-11 00:35:41,228 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:36:01]  *** Error codes and diagnostics ***
[2026-01-10 19:36:01]     "exeErrorCode": 0,
[2026-01-10 19:36:01]     "exeErrorDiag": "",
[2026-01-10 19:36:01]     "pilotErrorCode": 0,
[2026-01-10 19:36:01]     "pilotErrorDiag": "",
[2026-01-10 19:36:01]  *** Listing of results directory ***
[2026-01-10 19:36:01] total 433296
[2026-01-10 19:36:01] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 19:36:01] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:01 queuedata.json
[2026-01-10 19:36:01] -rwx------. 1 boincer umatlas     36322 Jan 10 18:02 runpilot2-wrapper.sh
[2026-01-10 19:36:01] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:36:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:02 run_atlas
[2026-01-10 19:36:01] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:02 job.xml
[2026-01-10 19:36:01] -rw-r--r--. 2 boincer umatlas 391230903 Jan 10 18:02 EVNT.47962006._000048.pool.root.1
[2026-01-10 19:36:01] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:02 start_atlas.sh
[2026-01-10 19:36:01] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:02 shared
[2026-01-10 19:36:01] -rw-r--r--. 2 boincer umatlas    592619 Jan 10 18:02 input.tar.gz
[2026-01-10 19:36:01] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:02 boinc_lockfile
[2026-01-10 19:36:01] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 18:02 pandaJob.out
[2026-01-10 19:36:01] -rw-------. 1 boincer umatlas        57 Jan 10 18:02 setup.sh.local
[2026-01-10 19:36:01] -rw-------. 1 boincer umatlas    989548 Jan 10 18:03 agis_schedconf.cvmfs.json
[2026-01-10 19:36:01] -rw-------. 1 boincer umatlas   1516240 Jan 10 18:03 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:36:01] drwx------. 5 boincer umatlas      4096 Jan 10 18:03 pilot3
[2026-01-10 19:36:01] -rw-r--r--. 1 boincer umatlas       530 Jan 10 19:20 boinc_task_state.xml
[2026-01-10 19:36:01] -rw-r--r--. 1 boincer umatlas      6865 Jan 10 19:27 init_data.xml
[2026-01-10 19:36:01] -rw-------. 1 boincer umatlas  44509748 Jan 10 19:34 HITS.47962010._002678.pool.root.1
[2026-01-10 19:36:01] -rw-------. 1 boincer umatlas      1047 Jan 10 19:34 memory_monitor_summary.json
[2026-01-10 19:36:01] -rw-------. 1 boincer umatlas   1321905 Jan 10 19:34 log.47962010._002678.job.log.tgz.1
[2026-01-10 19:36:01] -rw-------. 1 boincer umatlas      8571 Jan 10 19:35 heartbeat.json
[2026-01-10 19:36:01] -rw-------. 1 boincer umatlas        95 Jan 10 19:35 pilot_heartbeat.json
[2026-01-10 19:36:01] -rw-------. 1 boincer umatlas      5009 Jan 10 19:35 pilotlog.txt
[2026-01-10 19:36:01] -rw-------. 1 boincer umatlas    693222 Jan 10 19:35 log.47962010._002678.job.log.1
[2026-01-10 19:36:01] -rw-------. 1 boincer umatlas       353 Jan 10 19:35 output.list
[2026-01-10 19:36:01] -rw-r--r--. 1 boincer umatlas       620 Jan 10 19:35 runtime_log
[2026-01-10 19:36:01] -rw-------. 1 boincer umatlas   2037760 Jan 10 19:35 result.tar.gz
[2026-01-10 19:36:01] -rw-r--r--. 1 boincer umatlas      9342 Jan 10 19:35 runtime_log.err
[2026-01-10 19:36:01] -rw-------. 1 boincer umatlas       652 Jan 10 19:35 C0zNDmD9wy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmWdhKDmOEwCGo.diag
[2026-01-10 19:36:01] -rw-r--r--. 1 boincer umatlas        27 Jan 10 19:35 wrapper_checkpoint.txt
[2026-01-10 19:36:01] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 19:36 boinc_mmap_file
[2026-01-10 19:36:01] -rw-r--r--. 1 boincer umatlas     22434 Jan 10 19:36 stderr.txt
[2026-01-10 19:36:01] HITS file was successfully produced:
[2026-01-10 19:36:01] -rw-------. 1 boincer umatlas 44509748 Jan 10 19:34 shared/HITS.pool.root.1
[2026-01-10 19:36:01]  *** Contents of shared directory: ***
[2026-01-10 19:36:01] total 428124
[2026-01-10 19:36:01] -rw-r--r--. 2 boincer umatlas 391230903 Jan 10 18:02 ATLAS.root_0
[2026-01-10 19:36:01] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:02 start_atlas.sh
[2026-01-10 19:36:01] -rw-r--r--. 2 boincer umatlas    592619 Jan 10 18:02 input.tar.gz
[2026-01-10 19:36:01] -rw-------. 1 boincer umatlas  44509748 Jan 10 19:34 HITS.pool.root.1
[2026-01-10 19:36:01] -rw-------. 1 boincer umatlas   2037760 Jan 10 19:35 result.tar.gz
19:36:03 (217208): run_atlas exited; CPU time 17075.270613
19:36:03 (217208): called boinc_finish(0)

</stderr_txt>
]]>

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