Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:03:12 (3552587): wrapper (7.7.26015): starting
18:03:12 (3552587): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 18:03:12] Arguments: --nthreads 9
[2026-01-10 18:03:12] Threads: 9
[2026-01-10 18:03:12] Checking for CVMFS
[2026-01-10 18:03:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:03:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:03:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:03:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:03:13] 2.13.3.0 6557 24945 202740 154994 1 86 30598005 40960001 20155 16776704 0 60549916 99.633 59531343 42488 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 18:03:13] CVMFS is ok
[2026-01-10 18:03:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:03:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:03:13] Further information can be found at the LHC@home message board.
[2026-01-10 18:03:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:03:13] Checking for apptainer binary...
[2026-01-10 18:03:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:03:13] Running /usr/bin/apptainer --version
[2026-01-10 18:03:13] apptainer version 1.4.5-2.el9
[2026-01-10 18:03:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:03:14] c-212-20.aglt2.org
[2026-01-10 18:03:14] apptainer works
[2026-01-10 18:03:14] Set ATHENA_PROC_NUMBER=9
[2026-01-10 18:03:14] Set ATHENA_CORE_NUMBER=9
[2026-01-10 18:03:15] Starting ATLAS job with PandaID=6965803435
[2026-01-10 18:03:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:26:59]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:26:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 19:26:59]  replicas=None
[2026-01-10 19:26:59]  scope=mc16_13TeV
[2026-01-10 19:26:59]  status=None
[2026-01-10 19:26:59]  status_code=0
[2026-01-10 19:26:59]  storage_token=
[2026-01-10 19:26:59]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6965803435/log.47962010._002887.job.log.tgz.1
[2026-01-10 19:26:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/2d/2d/log.47962010._002887.job.log.tgz.1
[2026-01-10 19:26:59]  workdir=None
[2026-01-10 19:26:59] ]
[2026-01-10 19:26:59] 2026-01-11 00:26:17,341 | INFO     | transferring file log.47962010._002887.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6965803435/log.47962010._002887.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 19:26:59] 2026-01-11 00:26:17,341 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6965803435/log.47962010._002887.job.log.tgz.1 /tmp/boinchome/slots/2/log.47962010._002887.job
[2026-01-10 19:26:59] 2026-01-11 00:26:17,363 | INFO     | adding to output.list: log.47962010._002887.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/2d/2d/log.47962010._002887.job.log.tgz.
[2026-01-10 19:26:59] 2026-01-11 00:26:17,364 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 19:26:59] 2026-01-11 00:26:17,364 | INFO     | summary of transferred files:
[2026-01-10 19:26:59] 2026-01-11 00:26:17,364 | INFO     |  -- lfn=log.47962010._002887.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 19:26:59] 2026-01-11 00:26:17,364 | INFO     | stage-out finished correctly
[2026-01-10 19:26:59] 2026-01-11 00:26:17,677 | INFO     | monitor loop #333: job 0:6965803435 is in state 'finished'
[2026-01-10 19:26:59] 2026-01-11 00:26:17,678 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:26:59] 2026-01-11 00:26:18,750 | INFO     | time since job start (4958s) is within the limit (349056.0s)
[2026-01-10 19:26:59] 2026-01-11 00:26:19,118 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 19:26:59] 2026-01-11 00:26:19,664 | INFO     | job 6965803435 has state=finished
[2026-01-10 19:26:59] 2026-01-11 00:26:19,664 | INFO     | preparing for final server update for job 6965803435 in state='finished'
[2026-01-10 19:26:59] 2026-01-11 00:26:19,664 | INFO     | this job has now completed (state=finished)
[2026-01-10 19:26:59] 2026-01-11 00:26:19,664 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 19:26:59] 2026-01-11 00:26:19,665 | INFO     | log transfer has been attempted: DONE
[2026-01-10 19:26:59] 2026-01-11 00:26:19,665 | INFO     | job 6965803435 has finished - writing final server update
[2026-01-10 19:26:59] 2026-01-11 00:26:19,665 | INFO     | total number of processed events: 50 (read)
[2026-01-10 19:26:59] 2026-01-11 00:26:19,666 | INFO     | executing command: lscpu
[2026-01-10 19:26:59] 2026-01-11 00:26:19,733 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 19:26:59] 2026-01-11 00:26:20,183 | INFO     | monitor loop #334: job 0:6965803435 is in state 'finished'
[2026-01-10 19:26:59] 2026-01-11 00:26:20,183 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:26:59] 2026-01-11 00:26:20,756 | INFO     | time since job start (4960s) is within the limit (349056.0s)
[2026-01-10 19:26:59] 2026-01-11 00:26:22,687 | INFO     | monitor loop #335: job 0:6965803435 is in state 'finished'
[2026-01-10 19:26:59] 2026-01-11 00:26:22,687 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:26:59] 2026-01-11 00:26:22,763 | INFO     | time since job start (4962s) is within the limit (349056.0s)
[2026-01-10 19:26:59] 2026-01-11 00:26:24,770 | INFO     | time since job start (4964s) is within the limit (349056.0s)
[2026-01-10 19:26:59] 2026-01-11 00:26:25,194 | INFO     | monitor loop #336: job 0:6965803435 is in state 'finished'
[2026-01-10 19:26:59] 2026-01-11 00:26:25,194 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:26:59] 2026-01-11 00:26:26,237 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 19:26:59] 2026-01-11 00:26:26,250 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3276.0402291666664
[2026-01-10 19:26:59] 2026-01-11 00:26:26,264 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965803435/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:26:59] 2026-01-11 00:26:26,265 | INFO     | extracted standard info from prmon json
[2026-01-10 19:26:59] 2026-01-11 00:26:26,265 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:26:59] 2026-01-11 00:26:26,265 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:26:59] 2026-01-11 00:26:26,267 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:26:59] 2026-01-11 00:26:26,267 | INFO     | sum of square deviations: 125510477.13513508
[2026-01-10 19:26:59] 2026-01-11 00:26:26,268 | INFO     | sum of deviations: 6700083781.972979
[2026-01-10 19:26:59] 2026-01-11 00:26:26,268 | INFO     | mean x: 1768088815.891892
[2026-01-10 19:26:59] 2026-01-11 00:26:26,268 | INFO     | mean y: 2610231.621621622
[2026-01-10 19:26:59] 2026-01-11 00:26:26,268 | INFO     | intersect: -94382683098.83324
[2026-01-10 19:26:59] 2026-01-11 00:26:26,268 | INFO     | chi2: 0.18253926402275358
[2026-01-10 19:26:59] 2026-01-11 00:26:26,268 | INFO     | current memory leak: 53.38 B/s (using 74 data points, chi2=0.18)
[2026-01-10 19:26:59] 2026-01-11 00:26:26,268 | INFO     | could have reported an average CPU frequency of 3303 MHz (6 samples)
[2026-01-10 19:26:59] 2026-01-11 00:26:26,268 | INFO     | ..............................
[2026-01-10 19:26:59] 2026-01-11 00:26:26,268 | INFO     | . Timing measurements:
[2026-01-10 19:26:59] 2026-01-11 00:26:26,269 | INFO     | . get job = 0 s
[2026-01-10 19:26:59] 2026-01-11 00:26:26,269 | INFO     | . initial setup = 2 s
[2026-01-10 19:26:59] 2026-01-11 00:26:26,269 | INFO     | . payload setup = 16 s
[2026-01-10 19:26:59] 2026-01-11 00:26:26,269 | INFO     | . stage-in = 0 s
[2026-01-10 19:26:59] 2026-01-11 00:26:26,269 | INFO     | . payload execution = 4903 s
[2026-01-10 19:26:59] 2026-01-11 00:26:26,269 | INFO     | . stage-out = 0 s
[2026-01-10 19:26:59] 2026-01-11 00:26:26,269 | INFO     | . log creation = 0 s
[2026-01-10 19:26:59] 2026-01-11 00:26:26,269 | INFO     | ..............................
[2026-01-10 19:26:59] 2026-01-11 00:26:26,341 | INFO     | 
[2026-01-10 19:26:59] 2026-01-11 00:26:26,342 | INFO     | job summary report
[2026-01-10 19:26:59] 2026-01-11 00:26:26,342 | INFO     | --------------------------------------------------
[2026-01-10 19:26:59] 2026-01-11 00:26:26,342 | INFO     | PanDA job id: 6965803435
[2026-01-10 19:26:59] 2026-01-11 00:26:26,342 | INFO     | task id: 47962010
[2026-01-10 19:26:59] 2026-01-11 00:26:26,342 | INFO     | errors: (none)
[2026-01-10 19:26:59] 2026-01-11 00:26:26,342 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:26:59] 2026-01-11 00:26:26,342 | INFO     | pilot state: finished 
[2026-01-10 19:26:59] 2026-01-11 00:26:26,342 | INFO     | transexitcode: 0
[2026-01-10 19:26:59] 2026-01-11 00:26:26,343 | INFO     | exeerrorcode: 0
[2026-01-10 19:26:59] 2026-01-11 00:26:26,343 | INFO     | exeerrordiag: 
[2026-01-10 19:26:59] 2026-01-11 00:26:26,343 | INFO     | exitcode: 0
[2026-01-10 19:26:59] 2026-01-11 00:26:26,343 | INFO     | exitmsg: OK
[2026-01-10 19:26:59] 2026-01-11 00:26:26,343 | INFO     | cpuconsumptiontime: 10515 s
[2026-01-10 19:26:59] 2026-01-11 00:26:26,343 | INFO     | nevents: 50
[2026-01-10 19:26:59] 2026-01-11 00:26:26,343 | INFO     | neventsw: 0
[2026-01-10 19:26:59] 2026-01-11 00:26:26,343 | INFO     | pid: 3591192
[2026-01-10 19:26:59] 2026-01-11 00:26:26,343 | INFO     | pgrp: 3591192
[2026-01-10 19:26:59] 2026-01-11 00:26:26,343 | INFO     | corecount: 9
[2026-01-10 19:26:59] 2026-01-11 00:26:26,343 | INFO     | event service: False
[2026-01-10 19:26:59] 2026-01-11 00:26:26,343 | INFO     | sizes: {0: 2284571, 1: 2284599, 11: 2284599, 14: 2284889, 22: 2284917, 4922: 2312126, 4923: 2321120, 4925: 2321176, 4932: 2321422}
[2026-01-10 19:26:59] 2026-01-11 00:26:26,343 | INFO     | --------------------------------------------------
[2026-01-10 19:26:59] 2026-01-11 00:26:26,343 | INFO     | 
[2026-01-10 19:26:59] 2026-01-11 00:26:26,344 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 19:26:59] 2026-01-11 00:26:26,396 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:26:59] 2026-01-11 00:26:26,397 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:26:59] 2026-01-11 00:26:26,397 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:26:59] 2026-01-11 00:26:26,397 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:26:59] 2026-01-11 00:26:26,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:26:59] 2026-01-11 00:26:26,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:26:59] 2026-01-11 00:26:26,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:26:59] 2026-01-11 00:26:26,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:26:59] 2026-01-11 00:26:26,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:26:59] 2026-01-11 00:26:26,397 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:26:59] 2026-01-11 00:26:26,397 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:26:59] 2026-01-11 00:26:26,397 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:26:59] 2026-01-11 00:26:26,397 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:26:59] 2026-01-11 00:26:26,397 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:26:59] 2026-01-11 00:26:26,397 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:26:59] 2026-01-11 00:26:26,397 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:26:59] 2026-01-11 00:26:26,398 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:26:59] 2026-01-11 00:26:26,398 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:26:59] 2026-01-11 00:26:26,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:26:59] 2026-01-11 00:26:26,398 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:26:59] 2026-01-11 00:26:26,398 | INFO     | job 6965803435 has completed (purged errors)
[2026-01-10 19:26:59] 2026-01-11 00:26:26,398 | INFO     | overall cleanup function is called
[2026-01-10 19:26:59] 2026-01-11 00:26:27,413 | INFO     | --- collectZombieJob: --- 10, [3591192]
[2026-01-10 19:26:59] 2026-01-11 00:26:27,413 | INFO     | zombie collector waiting for pid 3591192
[2026-01-10 19:26:59] 2026-01-11 00:26:27,424 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:26:59] 2026-01-11 00:26:27,424 | INFO     | collected zombie processes
[2026-01-10 19:26:59] 2026-01-11 00:26:27,424 | INFO     | will attempt to kill all subprocesses of pid=3591192
[2026-01-10 19:26:59] 2026-01-11 00:26:27,936 | INFO     | process IDs to be killed: [3591192] (in reverse order)
[2026-01-10 19:26:59] 2026-01-11 00:26:28,071 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:26:59] 2026-01-11 00:26:28,072 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:26:59] 2026-01-11 00:26:28,087 | INFO     | did not find any defunct processes belonging to 3591192
[2026-01-10 19:26:59] 2026-01-11 00:26:28,102 | INFO     | did not find any defunct processes belonging to 3591192
[2026-01-10 19:26:59] 2026-01-11 00:26:28,102 | INFO     | ready for new job
[2026-01-10 19:26:59] 2026-01-11 00:26:28,102 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:26:59] 2026-01-11 00:26:28,104 | INFO     | ***************************************
[2026-01-10 19:26:59] 2026-01-11 00:26:28,104 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:26:59] 2026-01-11 00:26:28,104 | INFO     | ***************************************
[2026-01-10 19:26:59] 2026-01-11 00:26:28,104 | INFO     | 
[2026-01-10 19:26:59] 2026-01-11 00:26:28,109 | INFO     | architecture information:
[2026-01-10 19:26:59] 2026-01-11 00:26:28,109 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:26:59] 2026-01-11 00:26:28,126 | INFO     | cat /etc/os-release:
[2026-01-10 19:26:59] NAME="CentOS Linux"
[2026-01-10 19:26:59] VERSION="7 (Core)"
[2026-01-10 19:26:59] ID="centos"
[2026-01-10 19:26:59] ID_LIKE="rhel fedora"
[2026-01-10 19:26:59] VERSION_ID="7"
[2026-01-10 19:26:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:26:59] ANSI_COLOR="0;31"
[2026-01-10 19:26:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:26:59] HOME_URL="https://www.centos.org/"
[2026-01-10 19:26:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:26:59] 
[2026-01-10 19:26:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:26:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:26:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:26:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:26:59] 
[2026-01-10 19:26:59] 2026-01-11 00:26:28,126 | INFO     | ***************************************
[2026-01-10 19:26:59] 2026-01-11 00:26:28,630 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 19:26:59] 2026-01-11 00:26:28,656 | INFO     | sufficient remaining disk space (128800784384 B)
[2026-01-10 19:26:59] 2026-01-11 00:26:28,657 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:26:59] 2026-01-11 00:26:28,657 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:26:59] 2026-01-11 00:26:28,657 | INFO     | update_server=False
[2026-01-10 19:26:59] 2026-01-11 00:26:28,657 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:26:59] 2026-01-11 00:26:28,658 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:26:59] 2026-01-11 00:26:28,706 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:26:59] 2026-01-11 00:26:28,706 | INFO     | aborting loop
[2026-01-10 19:26:59] 2026-01-11 00:26:29,492 | INFO     | all data control threads have been joined
[2026-01-10 19:26:59] 2026-01-11 00:26:29,663 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:26:59] 2026-01-11 00:26:29,706 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:26:59] 2026-01-11 00:26:29,712 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:26:59] 2026-01-11 00:26:29,720 | INFO     | all payload control threads have been joined
[2026-01-10 19:26:59] 2026-01-11 00:26:30,208 | INFO     | all job control threads have been joined
[2026-01-10 19:26:59] 2026-01-11 00:26:30,238 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:26:59] 2026-01-11 00:26:30,297 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:26:59] 2026-01-11 00:26:30,479 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:26:59] 2026-01-11 00:26:30,498 | INFO     | [data] control thread has finished
[2026-01-10 19:26:59] 2026-01-11 00:26:30,665 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:26:59] 2026-01-11 00:26:30,726 | INFO     | [payload] control thread has finished
[2026-01-10 19:26:59] 2026-01-11 00:26:30,773 | INFO     | [job] validate thread has finished
[2026-01-10 19:26:59] 2026-01-11 00:26:30,787 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:26:59] 2026-01-11 00:26:30,860 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:26:59] 2026-01-11 00:26:31,105 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:26:59] 2026-01-11 00:26:31,213 | INFO     | [job] control thread has finished
[2026-01-10 19:26:59] 2026-01-11 00:26:31,354 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:26:59] 2026-01-11 00:26:32,360 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:26:59] 2026-01-11 00:26:33,714 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:26:59] 2026-01-11 00:26:39,591 | INFO     | job.realtimelogging is not enabled
[2026-01-10 19:26:59] 2026-01-11 00:26:40,597 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:26:59] 2026-01-11 00:26:48,436 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:26:59] 2026-01-11 00:26:49,821 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139657027512128)>', '<ExcThread(monitor, started 139656666527488)>']
[2026-01-10 19:26:59] 2026-01-11 00:26:54,848 | INFO     | all workflow threads have been joined
[2026-01-10 19:26:59] 2026-01-11 00:26:54,848 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:26:59] 2026-01-11 00:26:54,848 | INFO     | traces error code: 0
[2026-01-10 19:26:59] 2026-01-11 00:26:54,856 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:26:59] 2026-01-11 00:26:58,646 | INFO     | PID=3563607 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:26:59] 2026-01-11 00:26:58,647 | INFO     | .. there are 15 such processes running
[2026-01-10 19:26:59] 2026-01-11 00:26:58,647 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:26:59] 2026-01-11 00:26:58,647 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:26:59] 2026-01-11 00:26:58,647 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:26:59] 2026-01-11 00:26:58,647 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:26:59] 2026-01-11 00:26:58,647 | INFO     | [monitor] control thread has ended
[2026-01-10 19:26:59] 2026-01-11 00:26:58,746 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:26:59] 2026-01-11 00:26:58,770 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:26:59] 2026-01-11 00:26:58,777 [wrapper] pilotpid: 3563607
[2026-01-10 19:26:59] 2026-01-11 00:26:58,783 [wrapper] Pilot exit status: 0
[2026-01-10 19:26:59] 2026-01-11 00:26:58,935 [wrapper] pandaids: 6965803435
[2026-01-10 19:26:59] 2026-01-11 00:26:59,065 [wrapper] cleanup supervisor_pilot 3958250 3563609
[2026-01-10 19:26:59] 2026-01-11 00:26:59,080 [wrapper] Test setup, not cleaning
[2026-01-10 19:26:59] 2026-01-11 00:26:59,130 [wrapper] apfmon messages muted
[2026-01-10 19:26:59] 2026-01-11 00:26:59,133 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:26:59] 2026-01-11 00:26:59,135 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:26:59]  *** Error codes and diagnostics ***
[2026-01-10 19:26:59]     "exeErrorCode": 0,
[2026-01-10 19:26:59]     "exeErrorDiag": "",
[2026-01-10 19:26:59]     "pilotErrorCode": 0,
[2026-01-10 19:26:59]     "pilotErrorDiag": "",
[2026-01-10 19:26:59]  *** Listing of results directory ***
[2026-01-10 19:26:59] total 434156
[2026-01-10 19:26:59] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 19:26:59] -rwx------. 1 boincer umatlas     36322 Jan 10 18:01 runpilot2-wrapper.sh
[2026-01-10 19:26:59] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:01 queuedata.json
[2026-01-10 19:26:59] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:26:59] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:03 run_atlas
[2026-01-10 19:26:59] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:03 job.xml
[2026-01-10 19:26:59] -rw-r--r--. 2 boincer umatlas 393319043 Jan 10 18:03 EVNT.47962006._000127.pool.root.1
[2026-01-10 19:26:59] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:03 start_atlas.sh
[2026-01-10 19:26:59] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:03 shared
[2026-01-10 19:26:59] -rw-r--r--. 2 boincer umatlas    592613 Jan 10 18:03 input.tar.gz
[2026-01-10 19:26:59] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:03 boinc_lockfile
[2026-01-10 19:26:59] -rw-r--r--. 1 boincer umatlas      2891 Jan 10 18:03 pandaJob.out
[2026-01-10 19:26:59] -rw-------. 1 boincer umatlas        57 Jan 10 18:03 setup.sh.local
[2026-01-10 19:26:59] -rw-------. 1 boincer umatlas    989548 Jan 10 18:03 agis_schedconf.cvmfs.json
[2026-01-10 19:26:59] -rw-------. 1 boincer umatlas   1516240 Jan 10 18:03 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:26:59] drwx------. 5 boincer umatlas      4096 Jan 10 18:03 pilot3
[2026-01-10 19:26:59] -rw-r--r--. 1 boincer umatlas       530 Jan 10 19:19 boinc_task_state.xml
[2026-01-10 19:26:59] -rw-r--r--. 1 boincer umatlas      6957 Jan 10 19:19 init_data.xml
[2026-01-10 19:26:59] -rw-------. 1 boincer umatlas  43301065 Jan 10 19:26 HITS.47962010._002887.pool.root.1
[2026-01-10 19:26:59] -rw-------. 1 boincer umatlas        95 Jan 10 19:26 pilot_heartbeat.json
[2026-01-10 19:26:59] -rw-------. 1 boincer umatlas      1030 Jan 10 19:26 memory_monitor_summary.json
[2026-01-10 19:26:59] -rw-------. 1 boincer umatlas   1314138 Jan 10 19:26 log.47962010._002887.job.log.tgz.1
[2026-01-10 19:26:59] -rw-------. 1 boincer umatlas      8530 Jan 10 19:26 heartbeat.json
[2026-01-10 19:26:59] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 19:26 boinc_mmap_file
[2026-01-10 19:26:59] -rw-r--r--. 1 boincer umatlas        27 Jan 10 19:26 wrapper_checkpoint.txt
[2026-01-10 19:26:59] -rw-------. 1 boincer umatlas       823 Jan 10 19:26 pilotlog.txt
[2026-01-10 19:26:59] -rw-------. 1 boincer umatlas    705141 Jan 10 19:26 log.47962010._002887.job.log.1
[2026-01-10 19:26:59] -rw-------. 1 boincer umatlas       353 Jan 10 19:26 output.list
[2026-01-10 19:26:59] -rw-r--r--. 1 boincer umatlas       620 Jan 10 19:26 runtime_log
[2026-01-10 19:26:59] -rw-------. 1 boincer umatlas   2037760 Jan 10 19:26 result.tar.gz
[2026-01-10 19:26:59] -rw-r--r--. 1 boincer umatlas      9342 Jan 10 19:26 runtime_log.err
[2026-01-10 19:26:59] -rw-------. 1 boincer umatlas       653 Jan 10 19:26 2UhMDmv8wy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJvmKDmBZv7Lm.diag
[2026-01-10 19:26:59] -rw-r--r--. 1 boincer umatlas     22002 Jan 10 19:26 stderr.txt
[2026-01-10 19:26:59] HITS file was successfully produced:
[2026-01-10 19:26:59] -rw-------. 1 boincer umatlas 43301065 Jan 10 19:26 shared/HITS.pool.root.1
[2026-01-10 19:26:59]  *** Contents of shared directory: ***
[2026-01-10 19:26:59] total 428984
[2026-01-10 19:26:59] -rw-r--r--. 2 boincer umatlas 393319043 Jan 10 18:03 ATLAS.root_0
[2026-01-10 19:26:59] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:03 start_atlas.sh
[2026-01-10 19:26:59] -rw-r--r--. 2 boincer umatlas    592613 Jan 10 18:03 input.tar.gz
[2026-01-10 19:26:59] -rw-------. 1 boincer umatlas  43301065 Jan 10 19:26 HITS.pool.root.1
[2026-01-10 19:26:59] -rw-------. 1 boincer umatlas   2037760 Jan 10 19:26 result.tar.gz
19:27:01 (3552587): run_atlas exited; CPU time 10527.577270
19:27:01 (3552587): called boinc_finish(0)

</stderr_txt>
]]>

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