Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:02:12 (5349): wrapper (7.7.26015): starting
18:02:12 (5349): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 18:02:12] Arguments: --nthreads 12
[2026-01-10 18:02:12] Threads: 12
[2026-01-10 18:02:12] Checking for CVMFS
[2026-01-10 18:02:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:02:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:02:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:02:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:02:13] 2.11.2.0 2925 353116 97272 154994 3 1 15015758 20275200 1 130560 1 147338643 99.955 20459446 15952 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 18:02:13] CVMFS is ok
[2026-01-10 18:02:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:02:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:02:13] Further information can be found at the LHC@home message board.
[2026-01-10 18:02:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:02:13] Checking for apptainer binary...
[2026-01-10 18:02:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:02:13] Running /usr/bin/apptainer --version
[2026-01-10 18:02:13] apptainer version 1.3.2-1.el7
[2026-01-10 18:02:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:02:14] c-205-10.aglt2.org
[2026-01-10 18:02:14] apptainer works
[2026-01-10 18:02:14] Set ATHENA_PROC_NUMBER=12
[2026-01-10 18:02:14] Set ATHENA_CORE_NUMBER=12
[2026-01-10 18:02:14] Starting ATLAS job with PandaID=6965803075
[2026-01-10 18:02:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:46:47]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:46:47] 2026-01-11 00:45:48,887 | INFO     | mean y: 2668467.3541666665
[2026-01-10 19:46:47] 2026-01-11 00:45:48,887 | INFO     | intersect: -26233911253.940742
[2026-01-10 19:46:47] 2026-01-11 00:45:48,887 | INFO     | chi2: 0.016710599642330005
[2026-01-10 19:46:47] 2026-01-11 00:45:48,888 | INFO     | current chi2=0.016710599642330005 (change=98.76579528885615 %)
[2026-01-10 19:46:47] 2026-01-11 00:45:48,888 | INFO     | sum of square deviations: 233641590.0
[2026-01-10 19:46:47] 2026-01-11 00:45:48,888 | INFO     | sum of deviations: 1778826124.0000002
[2026-01-10 19:46:47] 2026-01-11 00:45:48,888 | INFO     | mean x: 1768089536.0
[2026-01-10 19:46:47] 2026-01-11 00:45:48,888 | INFO     | mean y: 2676946.6263736263
[2026-01-10 19:46:47] 2026-01-11 00:45:48,888 | INFO     | intersect: -13458641546.403223
[2026-01-10 19:46:47] 2026-01-11 00:45:48,889 | INFO     | chi2: 0.0008300972419814858
[2026-01-10 19:46:47] 2026-01-11 00:45:48,889 | INFO     | current chi2=0.0008300972419814858 (change=95.03251074318874 %)
[2026-01-10 19:46:47] 2026-01-11 00:45:48,889 | INFO     | sum of square deviations: 197203697.5
[2026-01-10 19:46:47] 2026-01-11 00:45:48,889 | INFO     | sum of deviations: 1212565625.0
[2026-01-10 19:46:47] 2026-01-11 00:45:48,889 | INFO     | mean x: 1768089688.5
[2026-01-10 19:46:47] 2026-01-11 00:45:48,890 | INFO     | mean y: 2679295.2558139535
[2026-01-10 19:46:47] 2026-01-11 00:45:48,890 | INFO     | intersect: -10868946365.779562
[2026-01-10 19:46:47] 2026-01-11 00:45:48,890 | INFO     | chi2: 0.00030806260406799745
[2026-01-10 19:46:47] 2026-01-11 00:45:48,890 | INFO     | current chi2=0.00030806260406799745 (change=62.88837156805439 %)
[2026-01-10 19:46:47] 2026-01-11 00:45:48,890 | INFO     | sum of square deviations: 164765880.0
[2026-01-10 19:46:47] 2026-01-11 00:45:48,891 | INFO     | sum of deviations: 849999985.9999999
[2026-01-10 19:46:47] 2026-01-11 00:45:48,891 | INFO     | mean x: 1768089841.0
[2026-01-10 19:46:47] 2026-01-11 00:45:48,891 | INFO     | mean y: 2680999.5185185187
[2026-01-10 19:46:47] 2026-01-11 00:45:48,891 | INFO     | intersect: -9118602728.015009
[2026-01-10 19:46:47] 2026-01-11 00:45:48,891 | INFO     | chi2: 0.0001701449866023145
[2026-01-10 19:46:47] 2026-01-11 00:45:48,891 | INFO     | current chi2=0.0001701449866023145 (change=44.769347413307244 %)
[2026-01-10 19:46:47] 2026-01-11 00:45:48,891 | INFO     | sum of square deviations: 136095575.0
[2026-01-10 19:46:47] 2026-01-11 00:45:48,892 | INFO     | sum of deviations: 584593194.9999999
[2026-01-10 19:46:47] 2026-01-11 00:45:48,892 | INFO     | mean x: 1768089993.5
[2026-01-10 19:46:47] 2026-01-11 00:45:48,892 | INFO     | mean y: 2682400.1315789474
[2026-01-10 19:46:47] 2026-01-11 00:45:48,892 | INFO     | intersect: -7592078695.868009
[2026-01-10 19:46:47] 2026-01-11 00:45:48,892 | INFO     | chi2: 6.754660327395276e-05
[2026-01-10 19:46:47] 2026-01-11 00:45:48,892 | INFO     | current chi2=6.754660327395276e-05 (change=60.300562113045586 %)
[2026-01-10 19:46:47] 2026-01-11 00:45:48,893 | INFO     | sum of square deviations: 110960220.0
[2026-01-10 19:46:47] 2026-01-11 00:45:48,893 | INFO     | sum of deviations: 426124039.99999994
[2026-01-10 19:46:47] 2026-01-11 00:45:48,893 | INFO     | mean x: 1768090146.0
[2026-01-10 19:46:47] 2026-01-11 00:45:48,893 | INFO     | mean y: 2683361.676056338
[2026-01-10 19:46:47] 2026-01-11 00:45:48,893 | INFO     | intersect: -6787369110.261272
[2026-01-10 19:46:47] 2026-01-11 00:45:48,894 | INFO     | chi2: 5.016738628455126e-05
[2026-01-10 19:46:47] 2026-01-11 00:45:48,894 | INFO     | current chi2=5.016738628455126e-05 (change=25.72922419046829 %)
[2026-01-10 19:46:47] 2026-01-11 00:45:48,894 | INFO     | sum of square deviations: 89127252.5
[2026-01-10 19:46:47] 2026-01-11 00:45:48,894 | INFO     | sum of deviations: 318946246.9999999
[2026-01-10 19:46:47] 2026-01-11 00:45:48,894 | INFO     | mean x: 1768090298.5
[2026-01-10 19:46:47] 2026-01-11 00:45:48,894 | INFO     | mean y: 2684105.696969697
[2026-01-10 19:46:47] 2026-01-11 00:45:48,895 | INFO     | intersect: -6324513796.691915
[2026-01-10 19:46:47] 2026-01-11 00:45:48,895 | INFO     | chi2: 4.3865659512038346e-05
[2026-01-10 19:46:47] 2026-01-11 00:45:48,895 | INFO     | current chi2=4.3865659512038346e-05 (change=12.561401418780891 %)
[2026-01-10 19:46:47] 2026-01-11 00:45:48,895 | INFO     | left removable region: 70
[2026-01-10 19:46:47] 2026-01-11 00:45:48,895 | INFO     | sum of square deviations: 4837300.0
[2026-01-10 19:46:47] 2026-01-11 00:45:48,895 | INFO     | sum of deviations: 18297804.0
[2026-01-10 19:46:47] 2026-01-11 00:45:48,895 | INFO     | mean x: 1768091183.0
[2026-01-10 19:46:47] 2026-01-11 00:45:48,896 | INFO     | mean y: 2686718.84
[2026-01-10 19:46:47] 2026-01-11 00:45:48,896 | INFO     | intersect: -6685380161.581337
[2026-01-10 19:46:47] 2026-01-11 00:45:48,896 | INFO     | chi2: 8.06998356953723e-06
[2026-01-10 19:46:47] 2026-01-11 00:45:48,896 | INFO     | current memory leak: 3.78 B/s (using 25 data points, chi2=0.00)
[2026-01-10 19:46:47] 2026-01-11 00:45:48,896 | INFO     | could have reported an average CPU frequency of 2139 MHz (7 samples)
[2026-01-10 19:46:47] 2026-01-11 00:45:48,896 | INFO     | ..............................
[2026-01-10 19:46:47] 2026-01-11 00:45:48,897 | INFO     | . Timing measurements:
[2026-01-10 19:46:47] 2026-01-11 00:45:48,897 | INFO     | . get job = 0 s
[2026-01-10 19:46:47] 2026-01-11 00:45:48,897 | INFO     | . initial setup = 2 s
[2026-01-10 19:46:47] 2026-01-11 00:45:48,897 | INFO     | . payload setup = 7 s
[2026-01-10 19:46:47] 2026-01-11 00:45:48,897 | INFO     | . stage-in = 0 s
[2026-01-10 19:46:47] 2026-01-11 00:45:48,897 | INFO     | . payload execution = 6159 s
[2026-01-10 19:46:47] 2026-01-11 00:45:48,897 | INFO     | . stage-out = 0 s
[2026-01-10 19:46:47] 2026-01-11 00:45:48,897 | INFO     | . log creation = 0 s
[2026-01-10 19:46:47] 2026-01-11 00:45:48,897 | INFO     | ..............................
[2026-01-10 19:46:47] 2026-01-11 00:45:48,977 | INFO     | 
[2026-01-10 19:46:47] 2026-01-11 00:45:48,977 | INFO     | job summary report
[2026-01-10 19:46:47] 2026-01-11 00:45:48,977 | INFO     | --------------------------------------------------
[2026-01-10 19:46:47] 2026-01-11 00:45:48,977 | INFO     | PanDA job id: 6965803075
[2026-01-10 19:46:47] 2026-01-11 00:45:48,977 | INFO     | task id: 47898826
[2026-01-10 19:46:47] 2026-01-11 00:45:48,977 | INFO     | errors: (none)
[2026-01-10 19:46:47] 2026-01-11 00:45:48,978 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:46:47] 2026-01-11 00:45:48,978 | INFO     | pilot state: finished 
[2026-01-10 19:46:47] 2026-01-11 00:45:48,978 | INFO     | transexitcode: 0
[2026-01-10 19:46:47] 2026-01-11 00:45:48,978 | INFO     | exeerrorcode: 0
[2026-01-10 19:46:47] 2026-01-11 00:45:48,978 | INFO     | exeerrordiag: 
[2026-01-10 19:46:47] 2026-01-11 00:45:48,979 | INFO     | exitcode: 0
[2026-01-10 19:46:47] 2026-01-11 00:45:48,979 | INFO     | exitmsg: OK
[2026-01-10 19:46:47] 2026-01-11 00:45:48,979 | INFO     | cpuconsumptiontime: 67271 s
[2026-01-10 19:46:47] 2026-01-11 00:45:48,979 | INFO     | nevents: 400
[2026-01-10 19:46:47] 2026-01-11 00:45:48,979 | INFO     | neventsw: 0
[2026-01-10 19:46:47] 2026-01-11 00:45:48,979 | INFO     | pid: 15747
[2026-01-10 19:46:47] 2026-01-11 00:45:48,979 | INFO     | pgrp: 15747
[2026-01-10 19:46:47] 2026-01-11 00:45:48,980 | INFO     | corecount: 12
[2026-01-10 19:46:47] 2026-01-11 00:45:48,980 | INFO     | event service: False
[2026-01-10 19:46:47] 2026-01-11 00:45:48,980 | INFO     | sizes: {0: 2283806, 1: 2283948, 6: 2284210, 11: 2284238, 6171: 2311046, 6173: 2320044, 6174: 2320228, 6181: 2320422}
[2026-01-10 19:46:47] 2026-01-11 00:45:48,980 | INFO     | --------------------------------------------------
[2026-01-10 19:46:47] 2026-01-11 00:45:48,980 | INFO     | 
[2026-01-10 19:46:47] 2026-01-11 00:45:48,980 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 19:46:47] 2026-01-11 00:45:49,005 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:46:47] 2026-01-11 00:45:49,005 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:46:47] 2026-01-11 00:45:49,005 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:46:47] 2026-01-11 00:45:49,005 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:46:47] 2026-01-11 00:45:49,005 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:46:47] 2026-01-11 00:45:49,006 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:46:47] 2026-01-11 00:45:49,006 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:46:47] 2026-01-11 00:45:49,006 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:46:47] 2026-01-11 00:45:49,006 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:46:47] 2026-01-11 00:45:49,006 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:46:47] 2026-01-11 00:45:49,006 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:46:47] 2026-01-11 00:45:49,007 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:46:47] 2026-01-11 00:45:49,007 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:46:47] 2026-01-11 00:45:49,007 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:46:47] 2026-01-11 00:45:49,007 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:46:47] 2026-01-11 00:45:49,007 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:46:47] 2026-01-11 00:45:49,007 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:46:47] 2026-01-11 00:45:49,007 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:46:47] 2026-01-11 00:45:49,007 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:46:47] 2026-01-11 00:45:49,008 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:46:47] 2026-01-11 00:45:49,008 | INFO     | job 6965803075 has completed (purged errors)
[2026-01-10 19:46:47] 2026-01-11 00:45:49,008 | INFO     | overall cleanup function is called
[2026-01-10 19:46:47] 2026-01-11 00:45:49,157 | INFO     | PID=9387 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 19:46:47] 2026-01-11 00:45:50,015 | INFO     | --- collectZombieJob: --- 10, [15747]
[2026-01-10 19:46:47] 2026-01-11 00:45:50,015 | INFO     | zombie collector waiting for pid 15747
[2026-01-10 19:46:47] 2026-01-11 00:45:50,016 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:46:47] 2026-01-11 00:45:50,016 | INFO     | collected zombie processes
[2026-01-10 19:46:47] 2026-01-11 00:45:50,016 | INFO     | will attempt to kill all subprocesses of pid=15747
[2026-01-10 19:46:47] 2026-01-11 00:45:50,109 | INFO     | process IDs to be killed: [15747] (in reverse order)
[2026-01-10 19:46:47] 2026-01-11 00:45:50,162 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:46:47] 2026-01-11 00:45:50,163 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:46:47] 2026-01-11 00:45:50,166 | INFO     | did not find any defunct processes belonging to 15747
[2026-01-10 19:46:47] 2026-01-11 00:45:50,168 | INFO     | did not find any defunct processes belonging to 15747
[2026-01-10 19:46:47] 2026-01-11 00:45:50,169 | INFO     | ready for new job
[2026-01-10 19:46:47] 2026-01-11 00:45:50,169 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:46:47] 2026-01-11 00:45:50,170 | INFO     | ***************************************
[2026-01-10 19:46:47] 2026-01-11 00:45:50,170 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:46:47] 2026-01-11 00:45:50,170 | INFO     | ***************************************
[2026-01-10 19:46:47] 2026-01-11 00:45:50,171 | INFO     | 
[2026-01-10 19:46:47] 2026-01-11 00:45:50,171 | INFO     | architecture information:
[2026-01-10 19:46:47] 2026-01-11 00:45:50,172 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:46:47] 2026-01-11 00:45:50,185 | INFO     | cat /etc/os-release:
[2026-01-10 19:46:47] NAME="CentOS Linux"
[2026-01-10 19:46:47] VERSION="7 (Core)"
[2026-01-10 19:46:47] ID="centos"
[2026-01-10 19:46:47] ID_LIKE="rhel fedora"
[2026-01-10 19:46:47] VERSION_ID="7"
[2026-01-10 19:46:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:46:47] ANSI_COLOR="0;31"
[2026-01-10 19:46:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:46:47] HOME_URL="https://www.centos.org/"
[2026-01-10 19:46:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:46:47] 
[2026-01-10 19:46:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:46:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:46:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:46:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:46:47] 
[2026-01-10 19:46:47] 2026-01-11 00:45:50,186 | INFO     | ***************************************
[2026-01-10 19:46:47] 2026-01-11 00:45:50,689 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 19:46:47] 2026-01-11 00:45:50,707 | INFO     | sufficient remaining disk space (29299310592 B)
[2026-01-10 19:46:47] 2026-01-11 00:45:50,708 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:46:47] 2026-01-11 00:45:50,708 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:46:47] 2026-01-11 00:45:50,708 | INFO     | update_server=False
[2026-01-10 19:46:47] 2026-01-11 00:45:50,708 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:46:47] 2026-01-11 00:45:50,709 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:46:47] 2026-01-11 00:45:50,709 | INFO     | aborting loop
[2026-01-10 19:46:47] 2026-01-11 00:45:50,709 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:46:47] 2026-01-11 00:45:50,711 | INFO     | all job control threads have been joined
[2026-01-10 19:46:47] 2026-01-11 00:45:51,021 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:46:47] 2026-01-11 00:45:51,477 | INFO     | all payload control threads have been joined
[2026-01-10 19:46:47] 2026-01-11 00:45:51,668 | INFO     | all data control threads have been joined
[2026-01-10 19:46:47] 2026-01-11 00:45:51,714 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:46:47] 2026-01-11 00:45:51,715 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:46:47] 2026-01-11 00:45:51,715 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:46:47] 2026-01-11 00:45:51,716 | INFO     | [job] control thread has finished
[2026-01-10 19:46:47] 2026-01-11 00:45:51,795 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:46:47] 2026-01-11 00:45:52,037 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:46:47] 2026-01-11 00:45:52,470 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:46:47] 2026-01-11 00:45:52,482 | INFO     | [payload] control thread has finished
[2026-01-10 19:46:47] 2026-01-11 00:45:52,652 | INFO     | [job] validate thread has finished
[2026-01-10 19:46:47] 2026-01-11 00:45:52,673 | INFO     | [data] control thread has finished
[2026-01-10 19:46:47] 2026-01-11 00:45:52,783 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:46:47] 2026-01-11 00:45:52,794 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:46:47] 2026-01-11 00:45:53,027 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:46:47] 2026-01-11 00:45:53,065 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:46:47] 2026-01-11 00:45:53,084 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:46:47] 2026-01-11 00:45:53,085 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:46:47] 2026-01-11 00:45:56,043 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:46:47] 2026-01-11 00:46:21,342 | INFO     | PID=9387 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 19:46:47] 2026-01-11 00:46:21,343 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:46:47] 2026-01-11 00:46:21,343 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:46:47] 2026-01-11 00:46:21,343 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:46:47] 2026-01-11 00:46:41,244 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:46:47] 2026-01-11 00:46:42,559 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139824092854080)>', '<ExcThread(monitor, started 139823515948800)>']
[2026-01-10 19:46:47] 2026-01-11 00:46:43,455 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:46:47] 2026-01-11 00:46:43,456 | INFO     | [monitor] control thread has ended
[2026-01-10 19:46:47] 2026-01-11 00:46:47,564 | INFO     | all workflow threads have been joined
[2026-01-10 19:46:47] 2026-01-11 00:46:47,565 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:46:47] 2026-01-11 00:46:47,565 | INFO     | traces error code: 0
[2026-01-10 19:46:47] 2026-01-11 00:46:47,565 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:46:47] 2026-01-11 00:46:47,668 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:46:47] 2026-01-11 00:46:47,672 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:46:47] 2026-01-11 00:46:47,676 [wrapper] pilotpid: 9387
[2026-01-10 19:46:47] 2026-01-11 00:46:47,680 [wrapper] Pilot exit status: 0
[2026-01-10 19:46:47] 2026-01-11 00:46:47,695 [wrapper] pandaids: 6965803075
[2026-01-10 19:46:47] 2026-01-11 00:46:47,743 [wrapper] cleanup supervisor_pilot 14829 9388
[2026-01-10 19:46:47] 2026-01-11 00:46:47,747 [wrapper] Test setup, not cleaning
[2026-01-10 19:46:47] 2026-01-11 00:46:47,750 [wrapper] apfmon messages muted
[2026-01-10 19:46:47] 2026-01-11 00:46:47,754 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:46:47] 2026-01-11 00:46:47,758 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:46:47]  *** Error codes and diagnostics ***
[2026-01-10 19:46:47]     "exeErrorCode": 0,
[2026-01-10 19:46:47]     "exeErrorDiag": "",
[2026-01-10 19:46:47]     "pilotErrorCode": 0,
[2026-01-10 19:46:47]     "pilotErrorDiag": "",
[2026-01-10 19:46:47]  *** Listing of results directory ***
[2026-01-10 19:46:47] total 447368
[2026-01-10 19:46:47] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 18:00 queuedata.json
[2026-01-10 19:46:47] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 19:46:47] -rwx------ 1 boincer umatlas     36322 Jan 10 18:00 runpilot2-wrapper.sh
[2026-01-10 19:46:47] -rw-r--r-- 1 boincer umatlas       100 Jan 10 18:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:46:47] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 18:02 run_atlas
[2026-01-10 19:46:47] -rw-r--r-- 1 boincer umatlas       105 Jan 10 18:02 job.xml
[2026-01-10 19:46:47] -rw-r--r-- 2 boincer umatlas 227280249 Jan 10 18:02 EVNT.47898824._001450.pool.root.1
[2026-01-10 19:46:47] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 18:02 start_atlas.sh
[2026-01-10 19:46:47] drwxrwx--x 2 boincer umatlas      4096 Jan 10 18:02 shared
[2026-01-10 19:46:47] -rw-r--r-- 2 boincer umatlas    592406 Jan 10 18:02 input.tar.gz
[2026-01-10 19:46:47] -rw-r--r-- 1 boincer umatlas         0 Jan 10 18:02 boinc_lockfile
[2026-01-10 19:46:47] -rw-r--r-- 1 boincer umatlas      2519 Jan 10 18:02 pandaJob.out
[2026-01-10 19:46:47] -rw------- 1 boincer umatlas        57 Jan 10 18:02 setup.sh.local
[2026-01-10 19:46:47] -rw------- 1 boincer umatlas    989548 Jan 10 18:02 agis_schedconf.cvmfs.json
[2026-01-10 19:46:47] -rw------- 1 boincer umatlas   1516240 Jan 10 18:02 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:46:47] drwx------ 5 boincer umatlas      4096 Jan 10 18:02 pilot3
[2026-01-10 19:46:47] -rw-r--r-- 1 boincer umatlas      5953 Jan 10 19:36 init_data.xml
[2026-01-10 19:46:47] -rw------- 1 boincer umatlas 224335310 Jan 10 19:45 HITS.47898826._040682.pool.root.1
[2026-01-10 19:46:47] -rw-r--r-- 1 boincer umatlas       529 Jan 10 19:45 boinc_task_state.xml
[2026-01-10 19:46:47] -rw------- 1 boincer umatlas      1046 Jan 10 19:45 memory_monitor_summary.json
[2026-01-10 19:46:47] -rw------- 1 boincer umatlas    404645 Jan 10 19:45 log.47898826._040682.job.log.tgz.1
[2026-01-10 19:46:47] -rw------- 1 boincer umatlas      7847 Jan 10 19:45 heartbeat.json
[2026-01-10 19:46:47] -rw------- 1 boincer umatlas        95 Jan 10 19:46 pilot_heartbeat.json
[2026-01-10 19:46:47] -rw-r--r-- 1 boincer umatlas        27 Jan 10 19:46 wrapper_checkpoint.txt
[2026-01-10 19:46:47] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 19:46 boinc_mmap_file
[2026-01-10 19:46:47] -rw------- 1 boincer umatlas      4745 Jan 10 19:46 pilotlog.txt
[2026-01-10 19:46:47] -rw------- 1 boincer umatlas    883384 Jan 10 19:46 log.47898826._040682.job.log.1
[2026-01-10 19:46:47] -rw------- 1 boincer umatlas       357 Jan 10 19:46 output.list
[2026-01-10 19:46:47] -rw-r--r-- 1 boincer umatlas       620 Jan 10 19:46 runtime_log
[2026-01-10 19:46:47] -rw------- 1 boincer umatlas   1310720 Jan 10 19:46 result.tar.gz
[2026-01-10 19:46:47] -rw-r--r-- 1 boincer umatlas      9344 Jan 10 19:46 runtime_log.err
[2026-01-10 19:46:47] -rw------- 1 boincer umatlas       660 Jan 10 19:46 fDRODm67wy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmcchKDmU0sbsn.diag
[2026-01-10 19:46:47] -rw-r--r-- 1 boincer umatlas     21058 Jan 10 19:46 stderr.txt
[2026-01-10 19:46:47] HITS file was successfully produced:
[2026-01-10 19:46:47] -rw------- 1 boincer umatlas 224335310 Jan 10 19:45 shared/HITS.pool.root.1
[2026-01-10 19:46:47]  *** Contents of shared directory: ***
[2026-01-10 19:46:47] total 442912
[2026-01-10 19:46:47] -rw-r--r-- 2 boincer umatlas 227280249 Jan 10 18:02 ATLAS.root_0
[2026-01-10 19:46:47] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 18:02 start_atlas.sh
[2026-01-10 19:46:47] -rw-r--r-- 2 boincer umatlas    592406 Jan 10 18:02 input.tar.gz
[2026-01-10 19:46:47] -rw------- 1 boincer umatlas 224335310 Jan 10 19:45 HITS.pool.root.1
[2026-01-10 19:46:47] -rw------- 1 boincer umatlas   1310720 Jan 10 19:46 result.tar.gz
19:46:49 (5349): run_atlas exited; CPU time 67176.907073
19:46:49 (5349): called boinc_finish(0)

</stderr_txt>
]]>

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