Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:02:12 (2347781): wrapper (7.7.26015): starting
18:02:12 (2347781): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 18:02:12] Arguments: --nthreads 9
[2026-01-10 18:02:12] Threads: 9
[2026-01-10 18:02:12] Checking for CVMFS
[2026-01-10 18:02:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:02:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:02:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:02:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:02:13] 2.13.3.0 12763 95438 161972 154994 2 300 20996194 40960001 14784 16776704 0 544068406 99.685 443288890 7370 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 18:02:13] CVMFS is ok
[2026-01-10 18:02:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:02:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:02:13] Further information can be found at the LHC@home message board.
[2026-01-10 18:02:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:02:13] Checking for apptainer binary...
[2026-01-10 18:02:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:02:13] Running /usr/bin/apptainer --version
[2026-01-10 18:02:13] apptainer version 1.4.5-2.el9
[2026-01-10 18:02:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:02:13] c7-2-17.aglt2.org
[2026-01-10 18:02:13] apptainer works
[2026-01-10 18:02:14] Set ATHENA_PROC_NUMBER=9
[2026-01-10 18:02:14] Set ATHENA_CORE_NUMBER=9
[2026-01-10 18:02:14] Starting ATLAS job with PandaID=6965803066
[2026-01-10 18:02:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
20:00:03 (2347781): BOINC client no longer exists - exiting
20:00:03 (2347781): timer handler: client dead, exiting
20:11:59 (2669157): wrapper (7.7.26015): starting
20:11:59 (2669157): wrapper: running run_atlas (--nthreads 11)
[2026-01-10 20:11:59] Arguments: --nthreads 11
[2026-01-10 20:11:59] Threads: 11
[2026-01-10 20:11:59] This job has been restarted, cleaning up previous attempt
[2026-01-10 20:11:59] Checking for CVMFS
[2026-01-10 20:12:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 20:12:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 20:12:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 20:12:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 20:12:00] 2.13.3.0 12763 95567 157152 154998 1 304 21191690 40960000 14609 16776704 0 544311810 99.685 443293006 7370 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 20:12:00] CVMFS is ok
[2026-01-10 20:12:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 20:12:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 20:12:00] Further information can be found at the LHC@home message board.
[2026-01-10 20:12:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 20:12:00] Checking for apptainer binary...
[2026-01-10 20:12:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 20:12:00] Running /usr/bin/apptainer --version
[2026-01-10 20:12:00] apptainer version 1.4.5-2.el9
[2026-01-10 20:12:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 20:12:00] c7-2-17.aglt2.org
[2026-01-10 20:12:00] apptainer works
[2026-01-10 20:12:00] Set ATHENA_PROC_NUMBER=11
[2026-01-10 20:12:00] Set ATHENA_CORE_NUMBER=11
[2026-01-10 20:12:00] Starting ATLAS job with PandaID=6965803066
[2026-01-10 20:12:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 00:28:01]  *** The last 200 lines of the pilot log: ***
[2026-01-11 00:28:01] 2026-01-11 05:27:27,042 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 00:28:01] 2026-01-11 05:27:27,413 | INFO     | time since job start (15315s) is within the limit (349056.0s)
[2026-01-11 00:28:01] 2026-01-11 05:27:28,371 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 00:28:01] 2026-01-11 05:27:28,390 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3183.34734375
[2026-01-11 00:28:01] 2026-01-11 05:27:28,446 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965803066/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 00:28:01] 2026-01-11 05:27:28,471 | INFO     | extracted standard info from prmon json
[2026-01-11 00:28:01] 2026-01-11 05:27:28,471 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 00:28:01] 2026-01-11 05:27:28,471 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 00:28:01] 2026-01-11 05:27:28,472 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 00:28:01] 2026-01-11 05:27:28,472 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 00:28:01] 2026-01-11 05:27:28,492 | INFO     | fitting pss+swap vs Time
[2026-01-11 00:28:01] 2026-01-11 05:27:28,492 | INFO     | sum of square deviations: 4903248248.63745
[2026-01-11 00:28:01] 2026-01-11 05:27:28,494 | INFO     | sum of deviations: 28670465753.04383
[2026-01-11 00:28:01] 2026-01-11 05:27:28,494 | INFO     | mean x: 1768101589.2031872
[2026-01-11 00:28:01] 2026-01-11 05:27:28,516 | INFO     | mean y: 2638867.1952191237
[2026-01-11 00:28:01] 2026-01-11 05:27:28,516 | INFO     | intersect: -10335874194.067606
[2026-01-11 00:28:01] 2026-01-11 05:27:28,517 | INFO     | chi2: 1.8801821794677989
[2026-01-11 00:28:01] 2026-01-11 05:27:28,517 | INFO     | sum of square deviations: 4616030510.926838
[2026-01-11 00:28:01] 2026-01-11 05:27:28,519 | INFO     | sum of deviations: 44859936281.585396
[2026-01-11 00:28:01] 2026-01-11 05:27:28,519 | INFO     | mean x: 1768101436.707317
[2026-01-11 00:28:01] 2026-01-11 05:27:28,519 | INFO     | mean y: 2647317.8414634145
[2026-01-11 00:28:01] 2026-01-11 05:27:28,519 | INFO     | intersect: -17180280221.808624
[2026-01-11 00:28:01] 2026-01-11 05:27:28,519 | INFO     | chi2: 1.1708776167999062
[2026-01-11 00:28:01] 2026-01-11 05:27:28,519 | INFO     | current chi2=1.1708776167999062 (change=37.7253103669277 %)
[2026-01-11 00:28:01] 2026-01-11 05:27:28,520 | INFO     | sum of square deviations: 4340254848.207449
[2026-01-11 00:28:01] 2026-01-11 05:27:28,541 | INFO     | sum of deviations: 43887083148.149376
[2026-01-11 00:28:01] 2026-01-11 05:27:28,542 | INFO     | mean x: 1768101284.2116182
[2026-01-11 00:28:01] 2026-01-11 05:27:28,542 | INFO     | mean y: 2646780.2323651453
[2026-01-11 00:28:01] 2026-01-11 05:27:28,542 | INFO     | intersect: -17875752251.242233
[2026-01-11 00:28:01] 2026-01-11 05:27:28,543 | INFO     | chi2: 1.170882461184134
[2026-01-11 00:28:01] 2026-01-11 05:27:28,543 | INFO     | current chi2=1.170882461184134 (change=-0.0004137395880027683 %)
[2026-01-11 00:28:01] 2026-01-11 05:27:28,543 | INFO     | right removable region: 240
[2026-01-11 00:28:01] 2026-01-11 05:27:28,543 | INFO     | sum of square deviations: 4615999400.926838
[2026-01-11 00:28:01] 2026-01-11 05:27:28,544 | INFO     | sum of deviations: -4432850554.31707
[2026-01-11 00:28:01] 2026-01-11 05:27:28,544 | INFO     | mean x: 1768101741.707317
[2026-01-11 00:28:01] 2026-01-11 05:27:28,544 | INFO     | mean y: 2656256.398373984
[2026-01-11 00:28:01] 2026-01-11 05:27:28,544 | INFO     | intersect: 1700605087.20683
[2026-01-11 00:28:01] 2026-01-11 05:27:28,545 | INFO     | chi2: 0.7240874157407778
[2026-01-11 00:28:01] 2026-01-11 05:27:28,545 | INFO     | current chi2=0.7240874157407778 (change=61.48844385144972 %)
[2026-01-11 00:28:01] 2026-01-11 05:27:28,547 | INFO     | sum of square deviations: 4340192628.207449
[2026-01-11 00:28:01] 2026-01-11 05:27:28,548 | INFO     | sum of deviations: -6246113554.331949
[2026-01-11 00:28:01] 2026-01-11 05:27:28,548 | INFO     | mean x: 1768101894.2116182
[2026-01-11 00:28:01] 2026-01-11 05:27:28,548 | INFO     | mean y: 2657256.261410788
[2026-01-11 00:28:01] 2026-01-11 05:27:28,548 | INFO     | intersect: 2547190679.755194
[2026-01-11 00:28:01] 2026-01-11 05:27:28,549 | INFO     | chi2: 0.7228848800583322
[2026-01-11 00:28:01] 2026-01-11 05:27:28,549 | INFO     | current chi2=0.7228848800583322 (change=0.16607603671932422 %)
[2026-01-11 00:28:01] 2026-01-11 05:27:28,549 | INFO     | left removable region: 20
[2026-01-11 00:28:01] 2026-01-11 05:27:28,549 | INFO     | sum of square deviations: 3301571613.1772842
[2026-01-11 00:28:01] 2026-01-11 05:27:28,550 | INFO     | sum of deviations: 7103399430.818179
[2026-01-11 00:28:01] 2026-01-11 05:27:28,550 | INFO     | mean x: 1768101863.7318182
[2026-01-11 00:28:01] 2026-01-11 05:27:28,550 | INFO     | mean y: 2667933.4545454546
[2026-01-11 00:28:01] 2026-01-11 05:27:28,550 | INFO     | intersect: -3801439698.902527
[2026-01-11 00:28:01] 2026-01-11 05:27:28,550 | INFO     | chi2: 0.0013491563450152761
[2026-01-11 00:28:01] 2026-01-11 05:27:28,551 | INFO     | current memory leak: 2.15 B/s (using 220 data points, chi2=0.00)
[2026-01-11 00:28:01] 2026-01-11 05:27:28,551 | INFO     | could have reported an average CPU frequency of 3246 MHz (12 samples)
[2026-01-11 00:28:01] 2026-01-11 05:27:28,551 | INFO     | ..............................
[2026-01-11 00:28:01] 2026-01-11 05:27:28,551 | INFO     | . Timing measurements:
[2026-01-11 00:28:01] 2026-01-11 05:27:28,551 | INFO     | . get job = 0 s
[2026-01-11 00:28:01] 2026-01-11 05:27:28,551 | INFO     | . initial setup = 1 s
[2026-01-11 00:28:01] 2026-01-11 05:27:28,552 | INFO     | . payload setup = 6 s
[2026-01-11 00:28:01] 2026-01-11 05:27:28,552 | INFO     | . stage-in = 0 s
[2026-01-11 00:28:01] 2026-01-11 05:27:28,552 | INFO     | . payload execution = 15278 s
[2026-01-11 00:28:01] 2026-01-11 05:27:28,552 | INFO     | . stage-out = 2 s
[2026-01-11 00:28:01] 2026-01-11 05:27:28,552 | INFO     | . log creation = 0 s
[2026-01-11 00:28:01] 2026-01-11 05:27:28,552 | INFO     | ..............................
[2026-01-11 00:28:01] 2026-01-11 05:27:28,622 | INFO     | 
[2026-01-11 00:28:01] 2026-01-11 05:27:28,622 | INFO     | job summary report
[2026-01-11 00:28:01] 2026-01-11 05:27:28,623 | INFO     | --------------------------------------------------
[2026-01-11 00:28:01] 2026-01-11 05:27:28,623 | INFO     | PanDA job id: 6965803066
[2026-01-11 00:28:01] 2026-01-11 05:27:28,623 | INFO     | task id: 47898826
[2026-01-11 00:28:01] 2026-01-11 05:27:28,623 | INFO     | errors: (none)
[2026-01-11 00:28:01] 2026-01-11 05:27:28,623 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 00:28:01] 2026-01-11 05:27:28,623 | INFO     | pilot state: finished 
[2026-01-11 00:28:01] 2026-01-11 05:27:28,623 | INFO     | transexitcode: 0
[2026-01-11 00:28:01] 2026-01-11 05:27:28,623 | INFO     | exeerrorcode: 0
[2026-01-11 00:28:01] 2026-01-11 05:27:28,623 | INFO     | exeerrordiag: 
[2026-01-11 00:28:01] 2026-01-11 05:27:28,623 | INFO     | exitcode: 0
[2026-01-11 00:28:01] 2026-01-11 05:27:28,623 | INFO     | exitmsg: OK
[2026-01-11 00:28:01] 2026-01-11 05:27:28,623 | INFO     | cpuconsumptiontime: 43961 s
[2026-01-11 00:28:01] 2026-01-11 05:27:28,624 | INFO     | nevents: 400
[2026-01-11 00:28:01] 2026-01-11 05:27:28,624 | INFO     | neventsw: 0
[2026-01-11 00:28:01] 2026-01-11 05:27:28,624 | INFO     | pid: 2699912
[2026-01-11 00:28:01] 2026-01-11 05:27:28,624 | INFO     | pgrp: 2699912
[2026-01-11 00:28:01] 2026-01-11 05:27:28,624 | INFO     | corecount: 11
[2026-01-11 00:28:01] 2026-01-11 05:27:28,624 | INFO     | event service: False
[2026-01-11 00:28:01] 2026-01-11 05:27:28,624 | INFO     | sizes: {0: 2283920, 5: 2284182, 11: 2284238, 15288: 2315357, 15289: 2315356, 15291: 2324410, 15293: 2324594, 15300: 2324788}
[2026-01-11 00:28:01] 2026-01-11 05:27:28,624 | INFO     | --------------------------------------------------
[2026-01-11 00:28:01] 2026-01-11 05:27:28,624 | INFO     | 
[2026-01-11 00:28:01] 2026-01-11 05:27:28,624 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-11 00:28:01] 2026-01-11 05:27:28,658 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 00:28:01] 2026-01-11 05:27:28,659 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 00:28:01] 2026-01-11 05:27:28,659 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 00:28:01] 2026-01-11 05:27:28,659 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 00:28:01] 2026-01-11 05:27:28,659 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 00:28:01] 2026-01-11 05:27:28,659 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 00:28:01] 2026-01-11 05:27:28,659 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 00:28:01] 2026-01-11 05:27:28,659 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 00:28:01] 2026-01-11 05:27:28,659 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 00:28:01] 2026-01-11 05:27:28,659 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 00:28:01] 2026-01-11 05:27:28,659 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 00:28:01] 2026-01-11 05:27:28,659 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 00:28:01] 2026-01-11 05:27:28,660 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 00:28:01] 2026-01-11 05:27:28,660 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 00:28:01] 2026-01-11 05:27:28,660 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 00:28:01] 2026-01-11 05:27:28,660 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 00:28:01] 2026-01-11 05:27:28,660 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 00:28:01] 2026-01-11 05:27:28,660 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 00:28:01] 2026-01-11 05:27:28,660 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 00:28:01] 2026-01-11 05:27:28,660 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 00:28:01] 2026-01-11 05:27:28,660 | INFO     | job 6965803066 has completed (purged errors)
[2026-01-11 00:28:01] 2026-01-11 05:27:28,660 | INFO     | overall cleanup function is called
[2026-01-11 00:28:01] 2026-01-11 05:27:29,669 | INFO     | --- collectZombieJob: --- 10, [2699912]
[2026-01-11 00:28:01] 2026-01-11 05:27:29,669 | INFO     | zombie collector waiting for pid 2699912
[2026-01-11 00:28:01] 2026-01-11 05:27:29,670 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 00:28:01] 2026-01-11 05:27:29,670 | INFO     | collected zombie processes
[2026-01-11 00:28:01] 2026-01-11 05:27:29,670 | INFO     | will attempt to kill all subprocesses of pid=2699912
[2026-01-11 00:28:01] 2026-01-11 05:27:30,155 | INFO     | process IDs to be killed: [2699912] (in reverse order)
[2026-01-11 00:28:01] 2026-01-11 05:27:30,289 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 00:28:01] 2026-01-11 05:27:30,290 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 00:28:01] 2026-01-11 05:27:30,306 | INFO     | did not find any defunct processes belonging to 2699912
[2026-01-11 00:28:01] 2026-01-11 05:27:30,321 | INFO     | did not find any defunct processes belonging to 2699912
[2026-01-11 00:28:01] 2026-01-11 05:27:30,321 | INFO     | ready for new job
[2026-01-11 00:28:01] 2026-01-11 05:27:30,321 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 00:28:01] 2026-01-11 05:27:30,324 | INFO     | ***************************************
[2026-01-11 00:28:01] 2026-01-11 05:27:30,324 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 00:28:01] 2026-01-11 05:27:30,324 | INFO     | ***************************************
[2026-01-11 00:28:01] 2026-01-11 05:27:30,324 | INFO     | 
[2026-01-11 00:28:01] 2026-01-11 05:27:30,334 | INFO     | architecture information:
[2026-01-11 00:28:01] 2026-01-11 05:27:30,338 | INFO     | executing command: cat /etc/os-release
[2026-01-11 00:28:01] 2026-01-11 05:27:30,361 | INFO     | cat /etc/os-release:
[2026-01-11 00:28:01] NAME="CentOS Linux"
[2026-01-11 00:28:01] VERSION="7 (Core)"
[2026-01-11 00:28:01] ID="centos"
[2026-01-11 00:28:01] ID_LIKE="rhel fedora"
[2026-01-11 00:28:01] VERSION_ID="7"
[2026-01-11 00:28:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 00:28:01] ANSI_COLOR="0;31"
[2026-01-11 00:28:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 00:28:01] HOME_URL="https://www.centos.org/"
[2026-01-11 00:28:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 00:28:01] 
[2026-01-11 00:28:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 00:28:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 00:28:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 00:28:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 00:28:01] 
[2026-01-11 00:28:01] 2026-01-11 05:27:30,362 | INFO     | ***************************************
[2026-01-11 00:28:01] 2026-01-11 05:27:30,866 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-11 00:28:01] 2026-01-11 05:27:30,889 | INFO     | sufficient remaining disk space (126594580480 B)
[2026-01-11 00:28:01] 2026-01-11 05:27:30,890 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 00:28:01] 2026-01-11 05:27:30,890 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 00:28:01] 2026-01-11 05:27:30,890 | INFO     | update_server=False
[2026-01-11 00:28:01] 2026-01-11 05:27:30,890 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 00:28:01] 2026-01-11 05:27:30,890 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 00:28:01] 2026-01-11 05:27:30,890 | INFO     | aborting loop
[2026-01-11 00:28:01] 2026-01-11 05:27:31,044 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 00:28:01] 2026-01-11 05:27:31,680 | INFO     | all data control threads have been joined
[2026-01-11 00:28:01] 2026-01-11 05:27:31,896 | INFO     | [job] retrieve thread has finished
[2026-01-11 00:28:01] 2026-01-11 05:27:31,901 | INFO     | [job] job monitor thread has finished
[2026-01-11 00:28:01] 2026-01-11 05:27:31,917 | INFO     | all job control threads have been joined
[2026-01-11 00:28:01] 2026-01-11 05:27:31,950 | INFO     | [job] validate thread has finished
[2026-01-11 00:28:01] 2026-01-11 05:27:31,979 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 00:28:01] 2026-01-11 05:27:32,102 | INFO     | [data] copytool_in thread has finished
[2026-01-11 00:28:01] 2026-01-11 05:27:32,106 | INFO     | all payload control threads have been joined
[2026-01-11 00:28:01] 2026-01-11 05:27:32,307 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 00:28:01] 2026-01-11 05:27:32,423 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 00:28:01] 2026-01-11 05:27:32,482 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 00:28:01] 2026-01-11 05:27:32,687 | INFO     | [data] control thread has finished
[2026-01-11 00:28:01] 2026-01-11 05:27:32,929 | INFO     | [job] control thread has finished
[2026-01-11 00:28:01] 2026-01-11 05:27:32,955 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 00:28:01] 2026-01-11 05:27:33,049 | INFO     | [data] copytool_out thread has finished
[2026-01-11 00:28:01] 2026-01-11 05:27:33,111 | INFO     | [payload] control thread has finished
[2026-01-11 00:28:01] 2026-01-11 05:27:33,234 | INFO     | [payload] validate_post thread has finished
[2026-01-11 00:28:01] 2026-01-11 05:27:33,363 | INFO     | [payload] failed_post thread has finished
[2026-01-11 00:28:01] 2026-01-11 05:27:33,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 00:28:01] 2026-01-11 05:27:34,640 | INFO     | [job] queue monitor thread has finished
[2026-01-11 00:28:01] 2026-01-11 05:27:36,317 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 00:28:01] 2026-01-11 05:27:38,943 | INFO     | [monitor] cgroup control has ended
[2026-01-11 00:28:01] 2026-01-11 05:27:39,349 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140225177737024)>', '<ExcThread(monitor, started 140224097150720)>']
[2026-01-11 00:28:01] 2026-01-11 05:27:44,377 | INFO     | all workflow threads have been joined
[2026-01-11 00:28:01] 2026-01-11 05:27:44,377 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 00:28:01] 2026-01-11 05:27:44,378 | INFO     | traces error code: 0
[2026-01-11 00:28:01] 2026-01-11 05:27:44,378 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 00:28:01] 2026-01-11 05:28:00,969 | INFO     | PID=2680602 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 00:28:01] 2026-01-11 05:28:00,969 | INFO     | .. there are 16 such processes running
[2026-01-11 00:28:01] 2026-01-11 05:28:00,969 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 00:28:01] 2026-01-11 05:28:00,969 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 00:28:01] 2026-01-11 05:28:00,969 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 00:28:01] 2026-01-11 05:28:00,969 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 00:28:01] 2026-01-11 05:28:00,969 | INFO     | [monitor] control thread has ended
[2026-01-11 00:28:01] 2026-01-11 05:28:01,153 [wrapper] ==== pilot stdout END ====
[2026-01-11 00:28:01] 2026-01-11 05:28:01,156 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 00:28:01] 2026-01-11 05:28:01,159 [wrapper] pilotpid: 2680602
[2026-01-11 00:28:01] 2026-01-11 05:28:01,162 [wrapper] Pilot exit status: 0
[2026-01-11 00:28:01] 2026-01-11 05:28:01,173 [wrapper] pandaids: 6965803066 6965803066
[2026-01-11 00:28:01] 2026-01-11 05:28:01,252 [wrapper] cleanup supervisor_pilot 3251660 2680603
[2026-01-11 00:28:01] 2026-01-11 05:28:01,254 [wrapper] Test setup, not cleaning
[2026-01-11 00:28:01] 2026-01-11 05:28:01,256 [wrapper] apfmon messages muted
[2026-01-11 00:28:01] 2026-01-11 05:28:01,258 [wrapper] ==== wrapper stdout END ====
[2026-01-11 00:28:01] 2026-01-11 05:28:01,260 [wrapper] ==== wrapper stderr END ====
[2026-01-11 00:28:01]  *** Error codes and diagnostics ***
[2026-01-11 00:28:01]     "exeErrorCode": 0,
[2026-01-11 00:28:01]     "exeErrorDiag": "",
[2026-01-11 00:28:01]     "pilotErrorCode": 0,
[2026-01-11 00:28:01]     "pilotErrorDiag": "",
[2026-01-11 00:28:01]  *** Listing of results directory ***
[2026-01-11 00:28:01] total 664248
[2026-01-11 00:28:01] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-11 00:28:01] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:00 queuedata.json
[2026-01-11 00:28:01] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-11 00:28:01] -rwx------. 1 boincer umatlas     36322 Jan 10 18:00 runpilot2-wrapper.sh
[2026-01-11 00:28:01] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 00:28:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:02 run_atlas
[2026-01-11 00:28:01] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:02 job.xml
[2026-01-11 00:28:01] -rw-r--r--. 3 boincer umatlas 223557319 Jan 10 18:02 EVNT.47898824._001408.pool.root.1
[2026-01-11 00:28:01] -rw-r--r--. 3 boincer umatlas 223557319 Jan 10 18:02 ATLAS.root_0
[2026-01-11 00:28:01] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:02 start_atlas.sh
[2026-01-11 00:28:01] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:02 shared
[2026-01-11 00:28:01] -rw-r--r--. 2 boincer umatlas    592409 Jan 10 18:02 input.tar.gz
[2026-01-11 00:28:01] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:02 boinc_lockfile
[2026-01-11 00:28:01] -rw-r--r--. 1 boincer umatlas      2519 Jan 10 20:12 pandaJob.out
[2026-01-11 00:28:01] -rw-------. 1 boincer umatlas        57 Jan 10 20:12 setup.sh.local
[2026-01-11 00:28:01] -rw-------. 1 boincer umatlas    989540 Jan 10 20:12 agis_schedconf.cvmfs.json
[2026-01-11 00:28:01] -rw-r--r--. 1 boincer umatlas      6947 Jan 11 00:18 init_data.xml
[2026-01-11 00:28:01] -rw-------. 1 boincer umatlas 224180234 Jan 11 00:26 HITS.47898826._040673.pool.root.1
[2026-01-11 00:28:01] -rw-r--r--. 1 boincer umatlas       531 Jan 11 00:26 boinc_task_state.xml
[2026-01-11 00:28:01] -rw-------. 1 boincer umatlas      1046 Jan 11 00:27 memory_monitor_summary.json
[2026-01-11 00:28:01] -rw-------. 1 boincer umatlas        96 Jan 11 00:27 pilot_heartbeat.json
[2026-01-11 00:28:01] -rw-------. 1 boincer umatlas   1516240 Jan 11 00:27 agis_ddmendpoints.agis.ALL.json
[2026-01-11 00:28:01] -rw-------. 1 boincer umatlas    504731 Jan 11 00:27 log.47898826._040673.job.log.tgz.1
[2026-01-11 00:28:01] -rw-------. 1 boincer umatlas      7778 Jan 11 00:27 heartbeat.json
[2026-01-11 00:28:01] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 00:27 boinc_mmap_file
[2026-01-11 00:28:01] -rw-r--r--. 1 boincer umatlas        28 Jan 11 00:27 wrapper_checkpoint.txt
[2026-01-11 00:28:01] -rw-------. 1 boincer umatlas       823 Jan 11 00:28 pilotlog.txt
[2026-01-11 00:28:01] -rw-------. 1 boincer umatlas   1982628 Jan 11 00:28 log.47898826._040673.job.log.1
[2026-01-11 00:28:01] -rw-------. 1 boincer umatlas       357 Jan 11 00:28 output.list
[2026-01-11 00:28:01] -rw-r--r--. 1 boincer umatlas       620 Jan 11 00:28 runtime_log
[2026-01-11 00:28:01] -rw-------. 1 boincer umatlas   2508800 Jan 11 00:28 result.tar.gz
[2026-01-11 00:28:01] -rw-r--r--. 1 boincer umatlas      9425 Jan 11 00:28 runtime_log.err
[2026-01-11 00:28:01] -rw-------. 1 boincer umatlas       780 Jan 11 00:28 gmGODm67wy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUchKDmYEgzhm.diag
[2026-01-11 00:28:01] -rw-r--r--. 1 boincer umatlas     23492 Jan 11 00:28 stderr.txt
[2026-01-11 00:28:01] HITS file was successfully produced:
[2026-01-11 00:28:01] -rw-------. 1 boincer umatlas 224180234 Jan 11 00:26 shared/HITS.pool.root.1
[2026-01-11 00:28:01]  *** Contents of shared directory: ***
[2026-01-11 00:28:01] total 440300
[2026-01-11 00:28:01] -rw-r--r--. 3 boincer umatlas 223557319 Jan 10 18:02 ATLAS.root_0
[2026-01-11 00:28:01] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:02 start_atlas.sh
[2026-01-11 00:28:01] -rw-r--r--. 2 boincer umatlas    592409 Jan 10 18:02 input.tar.gz
[2026-01-11 00:28:01] -rw-------. 1 boincer umatlas 224180234 Jan 11 00:26 HITS.pool.root.1
[2026-01-11 00:28:01] -rw-------. 1 boincer umatlas   2508800 Jan 11 00:28 result.tar.gz
00:28:02 (2669157): run_atlas exited; CPU time 44421.530430
00:28:02 (2669157): called boinc_finish(0)

</stderr_txt>
]]>

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