Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:01:58 (2345211): wrapper (7.7.26015): starting
18:01:58 (2345211): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 18:01:58] Arguments: --nthreads 9
[2026-01-10 18:01:58] Threads: 9
[2026-01-10 18:01:58] Checking for CVMFS
[2026-01-10 18:01:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:01:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:01:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:01:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:01:59] 2.13.3.0 12763 95437 161972 154994 2 299 20995979 40960001 14720 16776704 0 544062374 99.685 443288890 7370 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 18:01:59] CVMFS is ok
[2026-01-10 18:01:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:01:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:01:59] Further information can be found at the LHC@home message board.
[2026-01-10 18:01:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:01:59] Checking for apptainer binary...
[2026-01-10 18:01:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:01:59] Running /usr/bin/apptainer --version
[2026-01-10 18:01:59] apptainer version 1.4.5-2.el9
[2026-01-10 18:01:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:01:59] c7-2-17.aglt2.org
[2026-01-10 18:01:59] apptainer works
[2026-01-10 18:01:59] Set ATHENA_PROC_NUMBER=9
[2026-01-10 18:01:59] Set ATHENA_CORE_NUMBER=9
[2026-01-10 18:01:59] Starting ATLAS job with PandaID=6965803065
[2026-01-10 18:01:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
20:11:59 (2669156): wrapper (7.7.26015): starting
20:11:59 (2669156): wrapper: running run_atlas (--nthreads 11)
[2026-01-10 20:11:59] Arguments: --nthreads 11
[2026-01-10 20:11:59] Threads: 11
[2026-01-10 20:11:59] This job has been restarted, cleaning up previous attempt
[2026-01-10 20:11:59] Checking for CVMFS
[2026-01-10 20:12:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 20:12:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 20:12:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 20:12:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 20:12:00] 2.13.3.0 12763 95567 157152 154998 1 304 21191690 40960000 14609 16776704 0 544311810 99.685 443293006 7370 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 20:12:00] CVMFS is ok
[2026-01-10 20:12:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 20:12:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 20:12:00] Further information can be found at the LHC@home message board.
[2026-01-10 20:12:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 20:12:00] Checking for apptainer binary...
[2026-01-10 20:12:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 20:12:00] Running /usr/bin/apptainer --version
[2026-01-10 20:12:00] apptainer version 1.4.5-2.el9
[2026-01-10 20:12:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 20:12:00] c7-2-17.aglt2.org
[2026-01-10 20:12:00] apptainer works
[2026-01-10 20:12:00] Set ATHENA_PROC_NUMBER=11
[2026-01-10 20:12:00] Set ATHENA_CORE_NUMBER=11
[2026-01-10 20:12:00] Starting ATLAS job with PandaID=6965803065
[2026-01-10 20:12:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 00:52:03]  *** The last 200 lines of the pilot log: ***
[2026-01-11 00:52:03] 2026-01-11 05:51:31,041 | INFO     | intersect: -17793255265.106834
[2026-01-11 00:52:03] 2026-01-11 05:51:31,042 | INFO     | chi2: 1.1773134484842915
[2026-01-11 00:52:03] 2026-01-11 05:51:31,042 | INFO     | current chi2=1.1773134484842915 (change=-0.002021910490388658 %)
[2026-01-11 00:52:03] 2026-01-11 05:51:31,042 | INFO     | right removable region: 268
[2026-01-11 00:52:03] 2026-01-11 05:51:31,042 | INFO     | sum of square deviations: 6035828287.910766
[2026-01-11 00:52:03] 2026-01-11 05:51:31,044 | INFO     | sum of deviations: 23714421719.055767
[2026-01-11 00:52:03] 2026-01-11 05:51:31,048 | INFO     | mean x: 1768102442.1375465
[2026-01-11 00:52:03] 2026-01-11 05:51:31,048 | INFO     | mean y: 2632920.539033457
[2026-01-11 00:52:03] 2026-01-11 05:51:31,048 | INFO     | intersect: -6944139743.508308
[2026-01-11 00:52:03] 2026-01-11 05:51:31,048 | INFO     | chi2: 0.009538202641224519
[2026-01-11 00:52:03] 2026-01-11 05:51:31,049 | INFO     | current chi2=0.009538202641224519 (change=99.18981682342758 %)
[2026-01-11 00:52:03] 2026-01-11 05:51:31,049 | INFO     | sum of square deviations: 5705466622.814373
[2026-01-11 00:52:03] 2026-01-11 05:51:31,050 | INFO     | sum of deviations: 19059601919.136364
[2026-01-11 00:52:03] 2026-01-11 05:51:31,050 | INFO     | mean x: 1768102594.6401515
[2026-01-11 00:52:03] 2026-01-11 05:51:31,051 | INFO     | mean y: 2635067.590909091
[2026-01-11 00:52:03] 2026-01-11 05:51:31,051 | INFO     | intersect: -5903863705.231694
[2026-01-11 00:52:03] 2026-01-11 05:51:31,051 | INFO     | chi2: 0.004153980659627432
[2026-01-11 00:52:03] 2026-01-11 05:51:31,051 | INFO     | current chi2=0.004153980659627432 (change=56.44902068159309 %)
[2026-01-11 00:52:03] 2026-01-11 05:51:31,061 | INFO     | sum of square deviations: 5387384257.714278
[2026-01-11 00:52:03] 2026-01-11 05:51:31,062 | INFO     | sum of deviations: 15982871793.285698
[2026-01-11 00:52:03] 2026-01-11 05:51:31,062 | INFO     | mean x: 1768102747.142857
[2026-01-11 00:52:03] 2026-01-11 05:51:31,062 | INFO     | mean y: 2636541.1274131276
[2026-01-11 00:52:03] 2026-01-11 05:51:31,062 | INFO     | intersect: -5242832906.216261
[2026-01-11 00:52:03] 2026-01-11 05:51:31,063 | INFO     | chi2: 0.002100483189144368
[2026-01-11 00:52:03] 2026-01-11 05:51:31,063 | INFO     | current chi2=0.002100483189144368 (change=49.434449477365675 %)
[2026-01-11 00:52:03] 2026-01-11 05:51:31,063 | INFO     | sum of square deviations: 5081348630.110231
[2026-01-11 00:52:03] 2026-01-11 05:51:31,069 | INFO     | sum of deviations: 13449036308.086607
[2026-01-11 00:52:03] 2026-01-11 05:51:31,069 | INFO     | mean x: 1768102899.6456692
[2026-01-11 00:52:03] 2026-01-11 05:51:31,069 | INFO     | mean y: 2637802.5787401577
[2026-01-11 00:52:03] 2026-01-11 05:51:31,069 | INFO     | intersect: -4677080481.827178
[2026-01-11 00:52:03] 2026-01-11 05:51:31,069 | INFO     | chi2: 0.0007333037171833643
[2026-01-11 00:52:03] 2026-01-11 05:51:31,069 | INFO     | current chi2=0.0007333037171833643 (change=65.08880809076717 %)
[2026-01-11 00:52:03] 2026-01-11 05:51:31,070 | INFO     | sum of square deviations: 4787127177.5020275
[2026-01-11 00:52:03] 2026-01-11 05:51:31,071 | INFO     | sum of deviations: 11981177700.421679
[2026-01-11 00:52:03] 2026-01-11 05:51:31,071 | INFO     | mean x: 1768103052.1485944
[2026-01-11 00:52:03] 2026-01-11 05:51:31,071 | INFO     | mean y: 2638563.204819277
[2026-01-11 00:52:03] 2026-01-11 05:51:31,071 | INFO     | intersect: -4422553430.859615
[2026-01-11 00:52:03] 2026-01-11 05:51:31,072 | INFO     | chi2: 0.00048298321423102456
[2026-01-11 00:52:03] 2026-01-11 05:51:31,072 | INFO     | current chi2=0.00048298321423102456 (change=34.13599264351561 %)
[2026-01-11 00:52:03] 2026-01-11 05:51:31,089 | INFO     | sum of square deviations: 4504487337.389343
[2026-01-11 00:52:03] 2026-01-11 05:51:31,091 | INFO     | sum of deviations: 10995053530.290983
[2026-01-11 00:52:03] 2026-01-11 05:51:31,091 | INFO     | mean x: 1768103204.6516395
[2026-01-11 00:52:03] 2026-01-11 05:51:31,091 | INFO     | mean y: 2639094.8975409837
[2026-01-11 00:52:03] 2026-01-11 05:51:31,091 | INFO     | intersect: -4313143795.834446
[2026-01-11 00:52:03] 2026-01-11 05:51:31,091 | INFO     | chi2: 0.000436595990524308
[2026-01-11 00:52:03] 2026-01-11 05:51:31,091 | INFO     | current chi2=0.000436595990524308 (change=9.604313843612843 %)
[2026-01-11 00:52:03] 2026-01-11 05:51:31,091 | INFO     | left removable region: 60
[2026-01-11 00:52:03] 2026-01-11 05:51:31,091 | INFO     | sum of square deviations: 2790358420.442301
[2026-01-11 00:52:03] 2026-01-11 05:51:31,092 | INFO     | sum of deviations: 6085005831.384613
[2026-01-11 00:52:03] 2026-01-11 05:51:31,093 | INFO     | mean x: 1768103936.6634614
[2026-01-11 00:52:03] 2026-01-11 05:51:31,093 | INFO     | mean y: 2641343.576923077
[2026-01-11 00:52:03] 2026-01-11 05:51:31,093 | INFO     | intersect: -3853108041.9754367
[2026-01-11 00:52:03] 2026-01-11 05:51:31,093 | INFO     | chi2: 0.0003135990260586431
[2026-01-11 00:52:03] 2026-01-11 05:51:31,099 | INFO     | current memory leak: 2.18 B/s (using 208 data points, chi2=0.00)
[2026-01-11 00:52:03] 2026-01-11 05:51:31,100 | INFO     | could have reported an average CPU frequency of 3243 MHz (13 samples)
[2026-01-11 00:52:03] 2026-01-11 05:51:31,100 | INFO     | ..............................
[2026-01-11 00:52:03] 2026-01-11 05:51:31,100 | INFO     | . Timing measurements:
[2026-01-11 00:52:03] 2026-01-11 05:51:31,100 | INFO     | . get job = 0 s
[2026-01-11 00:52:03] 2026-01-11 05:51:31,100 | INFO     | . initial setup = 1 s
[2026-01-11 00:52:03] 2026-01-11 05:51:31,100 | INFO     | . payload setup = 7 s
[2026-01-11 00:52:03] 2026-01-11 05:51:31,100 | INFO     | . stage-in = 0 s
[2026-01-11 00:52:03] 2026-01-11 05:51:31,100 | INFO     | . payload execution = 16719 s
[2026-01-11 00:52:03] 2026-01-11 05:51:31,100 | INFO     | . stage-out = 2 s
[2026-01-11 00:52:03] 2026-01-11 05:51:31,100 | INFO     | . log creation = 0 s
[2026-01-11 00:52:03] 2026-01-11 05:51:31,100 | INFO     | ..............................
[2026-01-11 00:52:03] 2026-01-11 05:51:31,264 | INFO     | 
[2026-01-11 00:52:03] 2026-01-11 05:51:31,265 | INFO     | job summary report
[2026-01-11 00:52:03] 2026-01-11 05:51:31,265 | INFO     | --------------------------------------------------
[2026-01-11 00:52:03] 2026-01-11 05:51:31,265 | INFO     | PanDA job id: 6965803065
[2026-01-11 00:52:03] 2026-01-11 05:51:31,265 | INFO     | task id: 47898826
[2026-01-11 00:52:03] 2026-01-11 05:51:31,265 | INFO     | errors: (none)
[2026-01-11 00:52:03] 2026-01-11 05:51:31,265 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 00:52:03] 2026-01-11 05:51:31,265 | INFO     | pilot state: finished 
[2026-01-11 00:52:03] 2026-01-11 05:51:31,265 | INFO     | transexitcode: 0
[2026-01-11 00:52:03] 2026-01-11 05:51:31,265 | INFO     | exeerrorcode: 0
[2026-01-11 00:52:03] 2026-01-11 05:51:31,265 | INFO     | exeerrordiag: 
[2026-01-11 00:52:03] 2026-01-11 05:51:31,265 | INFO     | exitcode: 0
[2026-01-11 00:52:03] 2026-01-11 05:51:31,265 | INFO     | exitmsg: OK
[2026-01-11 00:52:03] 2026-01-11 05:51:31,266 | INFO     | cpuconsumptiontime: 45304 s
[2026-01-11 00:52:03] 2026-01-11 05:51:31,266 | INFO     | nevents: 400
[2026-01-11 00:52:03] 2026-01-11 05:51:31,266 | INFO     | neventsw: 0
[2026-01-11 00:52:03] 2026-01-11 05:51:31,266 | INFO     | pid: 2699902
[2026-01-11 00:52:03] 2026-01-11 05:51:31,266 | INFO     | pgrp: 2699902
[2026-01-11 00:52:03] 2026-01-11 05:51:31,266 | INFO     | corecount: 11
[2026-01-11 00:52:03] 2026-01-11 05:51:31,266 | INFO     | event service: False
[2026-01-11 00:52:03] 2026-01-11 05:51:31,266 | INFO     | sizes: {0: 2283920, 5: 2284182, 11: 2284238, 16731: 2316196, 16734: 2325194, 16736: 2325278, 16743: 2325600}
[2026-01-11 00:52:03] 2026-01-11 05:51:31,266 | INFO     | --------------------------------------------------
[2026-01-11 00:52:03] 2026-01-11 05:51:31,266 | INFO     | 
[2026-01-11 00:52:03] 2026-01-11 05:51:31,266 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 00:52:03] 2026-01-11 05:51:31,284 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 00:52:03] 2026-01-11 05:51:31,284 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 00:52:03] 2026-01-11 05:51:31,284 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 00:52:03] 2026-01-11 05:51:31,284 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 00:52:03] 2026-01-11 05:51:31,284 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 00:52:03] 2026-01-11 05:51:31,284 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 00:52:03] 2026-01-11 05:51:31,284 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 00:52:03] 2026-01-11 05:51:31,284 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 00:52:03] 2026-01-11 05:51:31,284 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 00:52:03] 2026-01-11 05:51:31,285 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 00:52:03] 2026-01-11 05:51:31,285 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 00:52:03] 2026-01-11 05:51:31,285 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 00:52:03] 2026-01-11 05:51:31,285 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 00:52:03] 2026-01-11 05:51:31,285 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 00:52:03] 2026-01-11 05:51:31,285 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 00:52:03] 2026-01-11 05:51:31,285 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 00:52:03] 2026-01-11 05:51:31,285 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 00:52:03] 2026-01-11 05:51:31,285 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 00:52:03] 2026-01-11 05:51:31,285 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 00:52:03] 2026-01-11 05:51:31,285 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 00:52:03] 2026-01-11 05:51:31,285 | INFO     | job 6965803065 has completed (purged errors)
[2026-01-11 00:52:03] 2026-01-11 05:51:31,286 | INFO     | overall cleanup function is called
[2026-01-11 00:52:03] 2026-01-11 05:51:32,294 | INFO     | --- collectZombieJob: --- 10, [2699902]
[2026-01-11 00:52:03] 2026-01-11 05:51:32,294 | INFO     | zombie collector waiting for pid 2699902
[2026-01-11 00:52:03] 2026-01-11 05:51:32,294 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 00:52:03] 2026-01-11 05:51:32,295 | INFO     | collected zombie processes
[2026-01-11 00:52:03] 2026-01-11 05:51:32,295 | INFO     | will attempt to kill all subprocesses of pid=2699902
[2026-01-11 00:52:03] 2026-01-11 05:51:32,681 | INFO     | process IDs to be killed: [2699902] (in reverse order)
[2026-01-11 00:52:03] 2026-01-11 05:51:32,794 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 00:52:03] 2026-01-11 05:51:32,794 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 00:52:03] 2026-01-11 05:51:32,807 | INFO     | did not find any defunct processes belonging to 2699902
[2026-01-11 00:52:03] 2026-01-11 05:51:32,819 | INFO     | did not find any defunct processes belonging to 2699902
[2026-01-11 00:52:03] 2026-01-11 05:51:32,819 | INFO     | ready for new job
[2026-01-11 00:52:03] 2026-01-11 05:51:32,819 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 00:52:03] 2026-01-11 05:51:32,822 | INFO     | ***************************************
[2026-01-11 00:52:03] 2026-01-11 05:51:32,822 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 00:52:03] 2026-01-11 05:51:32,822 | INFO     | ***************************************
[2026-01-11 00:52:03] 2026-01-11 05:51:32,822 | INFO     | 
[2026-01-11 00:52:03] 2026-01-11 05:51:32,827 | INFO     | architecture information:
[2026-01-11 00:52:03] 2026-01-11 05:51:32,827 | INFO     | executing command: cat /etc/os-release
[2026-01-11 00:52:03] 2026-01-11 05:51:32,840 | INFO     | cat /etc/os-release:
[2026-01-11 00:52:03] NAME="CentOS Linux"
[2026-01-11 00:52:03] VERSION="7 (Core)"
[2026-01-11 00:52:03] ID="centos"
[2026-01-11 00:52:03] ID_LIKE="rhel fedora"
[2026-01-11 00:52:03] VERSION_ID="7"
[2026-01-11 00:52:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 00:52:03] ANSI_COLOR="0;31"
[2026-01-11 00:52:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 00:52:03] HOME_URL="https://www.centos.org/"
[2026-01-11 00:52:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 00:52:03] 
[2026-01-11 00:52:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 00:52:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 00:52:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 00:52:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 00:52:03] 
[2026-01-11 00:52:03] 2026-01-11 05:51:32,841 | INFO     | ***************************************
[2026-01-11 00:52:03] 2026-01-11 05:51:33,343 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 00:52:03] 2026-01-11 05:51:33,360 | INFO     | sufficient remaining disk space (127135645696 B)
[2026-01-11 00:52:03] 2026-01-11 05:51:33,360 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 00:52:03] 2026-01-11 05:51:33,360 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 00:52:03] 2026-01-11 05:51:33,360 | INFO     | update_server=False
[2026-01-11 00:52:03] 2026-01-11 05:51:33,360 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 00:52:03] 2026-01-11 05:51:33,361 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 00:52:03] 2026-01-11 05:51:33,684 | INFO     | all job control threads have been joined
[2026-01-11 00:52:03] 2026-01-11 05:51:33,909 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 00:52:03] 2026-01-11 05:51:33,909 | INFO     | aborting loop
[2026-01-11 00:52:03] 2026-01-11 05:51:33,975 | INFO     | all data control threads have been joined
[2026-01-11 00:52:03] 2026-01-11 05:51:34,288 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 00:52:03] 2026-01-11 05:51:34,365 | INFO     | [job] retrieve thread has finished
[2026-01-11 00:52:03] 2026-01-11 05:51:34,427 | INFO     | all payload control threads have been joined
[2026-01-11 00:52:03] 2026-01-11 05:51:34,512 | INFO     | [payload] failed_post thread has finished
[2026-01-11 00:52:03] 2026-01-11 05:51:34,528 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 00:52:03] 2026-01-11 05:51:34,566 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 00:52:03] 2026-01-11 05:51:34,641 | INFO     | [job] validate thread has finished
[2026-01-11 00:52:03] 2026-01-11 05:51:34,690 | INFO     | [job] control thread has finished
[2026-01-11 00:52:03] 2026-01-11 05:51:34,756 | INFO     | [payload] validate_post thread has finished
[2026-01-11 00:52:03] 2026-01-11 05:51:34,902 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 00:52:03] 2026-01-11 05:51:34,914 | INFO     | [job] job monitor thread has finished
[2026-01-11 00:52:03] 2026-01-11 05:51:34,980 | INFO     | [data] control thread has finished
[2026-01-11 00:52:03] 2026-01-11 05:51:35,367 | INFO     | [data] copytool_out thread has finished
[2026-01-11 00:52:03] 2026-01-11 05:51:35,406 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 00:52:03] 2026-01-11 05:51:35,433 | INFO     | [payload] control thread has finished
[2026-01-11 00:52:03] 2026-01-11 05:51:35,634 | INFO     | [data] copytool_in thread has finished
[2026-01-11 00:52:03] 2026-01-11 05:51:36,279 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 00:52:03] 2026-01-11 05:51:37,285 | INFO     | [job] queue monitor thread has finished
[2026-01-11 00:52:03] 2026-01-11 05:51:38,296 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 00:52:03] 2026-01-11 05:51:40,366 | INFO     | [monitor] cgroup control has ended
[2026-01-11 00:52:03] 2026-01-11 05:51:42,321 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140266005772096)>', '<ExcThread(monitor, started 140265234884352)>']
[2026-01-11 00:52:03] 2026-01-11 05:51:47,349 | INFO     | all workflow threads have been joined
[2026-01-11 00:52:03] 2026-01-11 05:51:47,349 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 00:52:03] 2026-01-11 05:51:47,350 | INFO     | traces error code: 0
[2026-01-11 00:52:03] 2026-01-11 05:51:47,350 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 00:52:03] 2026-01-11 05:52:03,637 | INFO     | PID=2680661 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 00:52:03] 2026-01-11 05:52:03,638 | INFO     | .. there are 15 such processes running
[2026-01-11 00:52:03] 2026-01-11 05:52:03,638 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 00:52:03] 2026-01-11 05:52:03,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 00:52:03] 2026-01-11 05:52:03,639 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 00:52:03] 2026-01-11 05:52:03,639 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 00:52:03] 2026-01-11 05:52:03,639 | INFO     | [monitor] control thread has ended
[2026-01-11 00:52:03] 2026-01-11 05:52:03,763 [wrapper] ==== pilot stdout END ====
[2026-01-11 00:52:03] 2026-01-11 05:52:03,765 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 00:52:03] 2026-01-11 05:52:03,767 [wrapper] pilotpid: 2680661
[2026-01-11 00:52:03] 2026-01-11 05:52:03,769 [wrapper] Pilot exit status: 0
[2026-01-11 00:52:03] 2026-01-11 05:52:03,776 [wrapper] pandaids: 6965803065 6965803065
[2026-01-11 00:52:03] 2026-01-11 05:52:03,857 [wrapper] cleanup supervisor_pilot 3308457 2680662
[2026-01-11 00:52:03] 2026-01-11 05:52:03,860 [wrapper] Test setup, not cleaning
[2026-01-11 00:52:03] 2026-01-11 05:52:03,863 [wrapper] apfmon messages muted
[2026-01-11 00:52:03] 2026-01-11 05:52:03,866 [wrapper] ==== wrapper stdout END ====
[2026-01-11 00:52:03] 2026-01-11 05:52:03,868 [wrapper] ==== wrapper stderr END ====
[2026-01-11 00:52:03]  *** Error codes and diagnostics ***
[2026-01-11 00:52:03]     "exeErrorCode": 0,
[2026-01-11 00:52:03]     "exeErrorDiag": "",
[2026-01-11 00:52:03]     "pilotErrorCode": 0,
[2026-01-11 00:52:03]     "pilotErrorDiag": "",
[2026-01-11 00:52:03]  *** Listing of results directory ***
[2026-01-11 00:52:03] total 663012
[2026-01-11 00:52:03] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-11 00:52:03] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:00 queuedata.json
[2026-01-11 00:52:03] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-11 00:52:03] -rwx------. 1 boincer umatlas     36322 Jan 10 18:00 runpilot2-wrapper.sh
[2026-01-11 00:52:03] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 00:52:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:01 run_atlas
[2026-01-11 00:52:03] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:01 job.xml
[2026-01-11 00:52:03] -rw-r--r--. 3 boincer umatlas 223830619 Jan 10 18:01 EVNT.47898824._001404.pool.root.1
[2026-01-11 00:52:03] -rw-r--r--. 3 boincer umatlas 223830619 Jan 10 18:01 ATLAS.root_0
[2026-01-11 00:52:03] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:01 start_atlas.sh
[2026-01-11 00:52:03] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:01 shared
[2026-01-11 00:52:03] -rw-r--r--. 2 boincer umatlas    592407 Jan 10 18:01 input.tar.gz
[2026-01-11 00:52:03] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:01 boinc_lockfile
[2026-01-11 00:52:03] -rw-r--r--. 1 boincer umatlas      2519 Jan 10 20:12 pandaJob.out
[2026-01-11 00:52:03] -rw-------. 1 boincer umatlas        57 Jan 10 20:12 setup.sh.local
[2026-01-11 00:52:03] -rw-------. 1 boincer umatlas    989540 Jan 10 20:12 agis_schedconf.cvmfs.json
[2026-01-11 00:52:03] -rw-r--r--. 1 boincer umatlas      6946 Jan 11 00:49 init_data.xml
[2026-01-11 00:52:03] -rw-------. 1 boincer umatlas 221763494 Jan 11 00:50 HITS.47898826._040672.pool.root.1
[2026-01-11 00:52:03] -rw-r--r--. 1 boincer umatlas       531 Jan 11 00:50 boinc_task_state.xml
[2026-01-11 00:52:03] -rw-------. 1 boincer umatlas      1037 Jan 11 00:51 memory_monitor_summary.json
[2026-01-11 00:52:03] -rw-------. 1 boincer umatlas   1516240 Jan 11 00:51 agis_ddmendpoints.agis.ALL.json
[2026-01-11 00:52:03] -rw-------. 1 boincer umatlas    546742 Jan 11 00:51 log.47898826._040672.job.log.tgz.1
[2026-01-11 00:52:03] -rw-------. 1 boincer umatlas      7781 Jan 11 00:51 heartbeat.json
[2026-01-11 00:52:03] -rw-r--r--. 1 boincer umatlas        28 Jan 11 00:51 wrapper_checkpoint.txt
[2026-01-11 00:52:03] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 00:51 boinc_mmap_file
[2026-01-11 00:52:03] -rw-------. 1 boincer umatlas       823 Jan 11 00:52 pilotlog.txt
[2026-01-11 00:52:03] -rw-------. 1 boincer umatlas        96 Jan 11 00:52 pilot_heartbeat.json
[2026-01-11 00:52:03] -rw-------. 1 boincer umatlas   2242280 Jan 11 00:52 log.47898826._040672.job.log.1
[2026-01-11 00:52:03] -rw-------. 1 boincer umatlas       357 Jan 11 00:52 output.list
[2026-01-11 00:52:03] -rw-r--r--. 1 boincer umatlas       620 Jan 11 00:52 runtime_log
[2026-01-11 00:52:03] -rw-------. 1 boincer umatlas   2805760 Jan 11 00:52 result.tar.gz
[2026-01-11 00:52:03] -rw-------. 1 boincer umatlas       782 Jan 11 00:52 XTFODm67wy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTchKDmWvMKkn.diag
[2026-01-11 00:52:03] -rw-r--r--. 1 boincer umatlas      9425 Jan 11 00:52 runtime_log.err
[2026-01-11 00:52:03] -rw-r--r--. 1 boincer umatlas     23230 Jan 11 00:52 stderr.txt
[2026-01-11 00:52:03] HITS file was successfully produced:
[2026-01-11 00:52:04] -rw-------. 1 boincer umatlas 221763494 Jan 11 00:50 shared/HITS.pool.root.1
[2026-01-11 00:52:04]  *** Contents of shared directory: ***
[2026-01-11 00:52:04] total 438500
[2026-01-11 00:52:04] -rw-r--r--. 3 boincer umatlas 223830619 Jan 10 18:01 ATLAS.root_0
[2026-01-11 00:52:04] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:01 start_atlas.sh
[2026-01-11 00:52:04] -rw-r--r--. 2 boincer umatlas    592407 Jan 10 18:01 input.tar.gz
[2026-01-11 00:52:04] -rw-------. 1 boincer umatlas 221763494 Jan 11 00:50 HITS.pool.root.1
[2026-01-11 00:52:04] -rw-------. 1 boincer umatlas   2805760 Jan 11 00:52 result.tar.gz
00:52:05 (2669156): run_atlas exited; CPU time 45845.378922
00:52:05 (2669156): called boinc_finish(0)

</stderr_txt>
]]>

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