Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:02:03 (522371): wrapper (7.7.26015): starting
18:02:03 (522371): wrapper: running run_atlas (--nthreads 10)
[2026-01-10 18:02:03] Arguments: --nthreads 10
[2026-01-10 18:02:03] Threads: 10
[2026-01-10 18:02:03] Checking for CVMFS
[2026-01-10 18:02:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:02:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:02:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:02:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:02:06] 2.13.3.0 11323 95484 330124 154994 3 263 28164245 32935936 22187 16776704 0 317060039 99.421 494145546 39881 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 18:02:06] CVMFS is ok
[2026-01-10 18:02:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:02:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:02:06] Further information can be found at the LHC@home message board.
[2026-01-10 18:02:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:02:06] Checking for apptainer binary...
[2026-01-10 18:02:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:02:06] Running /usr/bin/apptainer --version
[2026-01-10 18:02:06] apptainer version 1.4.5-2.el9
[2026-01-10 18:02:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:02:07] c6-4-5-3.aglt2.org
[2026-01-10 18:02:07] apptainer works
[2026-01-10 18:02:07] Set ATHENA_PROC_NUMBER=10
[2026-01-10 18:02:07] Set ATHENA_CORE_NUMBER=10
[2026-01-10 18:02:07] Starting ATLAS job with PandaID=6965803062
[2026-01-10 18:02:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 22:16:21]  *** The last 200 lines of the pilot log: ***
[2026-01-10 22:16:21] 2026-01-11 03:15:47,890 | INFO     | chi2: 3.5852184716111313
[2026-01-10 22:16:21] 2026-01-11 03:15:47,891 | INFO     | sum of square deviations: 4285993513.495847
[2026-01-10 22:16:21] 2026-01-11 03:15:47,892 | INFO     | sum of deviations: 93697451412.97498
[2026-01-10 22:16:21] 2026-01-11 03:15:47,892 | INFO     | mean x: 1768093701.0791667
[2026-01-10 22:16:21] 2026-01-11 03:15:47,892 | INFO     | mean y: 2575698.475
[2026-01-10 22:16:21] 2026-01-11 03:15:47,892 | INFO     | intersect: -38650276464.9264
[2026-01-10 22:16:21] 2026-01-11 03:15:47,893 | INFO     | chi2: 3.586588694410469
[2026-01-10 22:16:21] 2026-01-11 03:15:47,893 | INFO     | current chi2=3.586588694410469 (change=-0.038218669522864145 %)
[2026-01-10 22:16:21] 2026-01-11 03:15:47,893 | INFO     | right removable region: 239
[2026-01-10 22:16:21] 2026-01-11 03:15:47,893 | INFO     | sum of square deviations: 4285908723.495847
[2026-01-10 22:16:21] 2026-01-11 03:15:47,895 | INFO     | sum of deviations: 25322596751.17917
[2026-01-10 22:16:21] 2026-01-11 03:15:47,895 | INFO     | mean x: 1768094006.0791667
[2026-01-10 22:16:21] 2026-01-11 03:15:47,895 | INFO     | mean y: 2615840.095833333
[2026-01-10 22:16:21] 2026-01-11 03:15:47,895 | INFO     | intersect: -10443880906.013195
[2026-01-10 22:16:21] 2026-01-11 03:15:47,895 | INFO     | chi2: 0.6492312062873885
[2026-01-10 22:16:21] 2026-01-11 03:15:47,895 | INFO     | current chi2=0.6492312062873885 (change=81.89144646474958 %)
[2026-01-10 22:16:21] 2026-01-11 03:15:47,896 | INFO     | sum of square deviations: 4023513500.9617157
[2026-01-10 22:16:21] 2026-01-11 03:15:47,897 | INFO     | sum of deviations: -2686558962.8553205
[2026-01-10 22:16:21] 2026-01-11 03:15:47,897 | INFO     | mean x: 1768094158.587234
[2026-01-10 22:16:21] 2026-01-11 03:15:47,897 | INFO     | mean y: 2632123.114893617
[2026-01-10 22:16:21] 2026-01-11 03:15:47,897 | INFO     | intersect: 1183214519.0206823
[2026-01-10 22:16:21] 2026-01-11 03:15:47,898 | INFO     | chi2: 0.20479834295400579
[2026-01-10 22:16:21] 2026-01-11 03:15:47,898 | INFO     | current chi2=0.20479834295400579 (change=68.45525277117535 %)
[2026-01-10 22:16:21] 2026-01-11 03:15:47,898 | INFO     | sum of square deviations: 3772077020.260859
[2026-01-10 22:16:21] 2026-01-11 03:15:47,899 | INFO     | sum of deviations: -16919840003.347828
[2026-01-10 22:16:21] 2026-01-11 03:15:47,899 | INFO     | mean x: 1768094311.0869565
[2026-01-10 22:16:21] 2026-01-11 03:15:47,900 | INFO     | mean y: 2640737.5173913045
[2026-01-10 22:16:21] 2026-01-11 03:15:47,900 | INFO     | intersect: 7933516139.513284
[2026-01-10 22:16:21] 2026-01-11 03:15:47,900 | INFO     | chi2: 0.06948491195135234
[2026-01-10 22:16:21] 2026-01-11 03:15:47,900 | INFO     | current chi2=0.06948491195135234 (change=66.07154581960779 %)
[2026-01-10 22:16:21] 2026-01-11 03:15:47,900 | INFO     | sum of square deviations: 3531338658.5600085
[2026-01-10 22:16:21] 2026-01-11 03:15:47,901 | INFO     | sum of deviations: -19622369738.626663
[2026-01-10 22:16:21] 2026-01-11 03:15:47,902 | INFO     | mean x: 1768094463.5866666
[2026-01-10 22:16:21] 2026-01-11 03:15:47,902 | INFO     | mean y: 2642417.7244444443
[2026-01-10 22:16:21] 2026-01-11 03:15:47,902 | INFO     | intersect: 9827302879.902767
[2026-01-10 22:16:21] 2026-01-11 03:15:47,902 | INFO     | chi2: 0.0465989171967516
[2026-01-10 22:16:21] 2026-01-11 03:15:47,902 | INFO     | current chi2=0.0465989171967516 (change=32.93663920970879 %)
[2026-01-10 22:16:21] 2026-01-11 03:15:47,902 | INFO     | sum of square deviations: 3301065365.3590956
[2026-01-10 22:16:21] 2026-01-11 03:15:47,904 | INFO     | sum of deviations: -18239682377.849995
[2026-01-10 22:16:21] 2026-01-11 03:15:47,904 | INFO     | mean x: 1768094616.0863636
[2026-01-10 22:16:21] 2026-01-11 03:15:47,904 | INFO     | mean y: 2641500.15
[2026-01-10 22:16:21] 2026-01-11 03:15:47,904 | INFO     | intersect: 9772058534.366692
[2026-01-10 22:16:21] 2026-01-11 03:15:47,904 | INFO     | chi2: 0.0465633987617585
[2026-01-10 22:16:21] 2026-01-11 03:15:47,904 | INFO     | current chi2=0.0465633987617585 (change=0.07622158867582304 %)
[2026-01-10 22:16:21] 2026-01-11 03:15:47,904 | INFO     | left removable region: 50
[2026-01-10 22:16:21] 2026-01-11 03:15:47,905 | INFO     | sum of square deviations: 2092899110.423283
[2026-01-10 22:16:21] 2026-01-11 03:15:47,906 | INFO     | sum of deviations: -4623803383.253967
[2026-01-10 22:16:21] 2026-01-11 03:15:47,906 | INFO     | mean x: 1768095195.5661376
[2026-01-10 22:16:21] 2026-01-11 03:15:47,906 | INFO     | mean y: 2631225.4603174604
[2026-01-10 22:16:21] 2026-01-11 03:15:47,906 | INFO     | intersect: 3908851313.403475
[2026-01-10 22:16:21] 2026-01-11 03:15:47,906 | INFO     | chi2: 0.03319538553878547
[2026-01-10 22:16:21] 2026-01-11 03:15:47,906 | INFO     | current memory leak: -2.21 B/s (using 189 data points, chi2=0.03)
[2026-01-10 22:16:21] 2026-01-11 03:15:47,907 | INFO     | could have reported an average CPU frequency of 3079 MHz (12 samples)
[2026-01-10 22:16:21] 2026-01-11 03:15:47,907 | INFO     | ..............................
[2026-01-10 22:16:21] 2026-01-11 03:15:47,907 | INFO     | . Timing measurements:
[2026-01-10 22:16:21] 2026-01-11 03:15:47,907 | INFO     | . get job = 0 s
[2026-01-10 22:16:21] 2026-01-11 03:15:47,907 | INFO     | . initial setup = 6 s
[2026-01-10 22:16:21] 2026-01-11 03:15:47,907 | INFO     | . payload setup = 59 s
[2026-01-10 22:16:21] 2026-01-11 03:15:47,907 | INFO     | . stage-in = 0 s
[2026-01-10 22:16:21] 2026-01-11 03:15:47,907 | INFO     | . payload execution = 14965 s
[2026-01-10 22:16:21] 2026-01-11 03:15:47,907 | INFO     | . stage-out = 2 s
[2026-01-10 22:16:21] 2026-01-11 03:15:47,907 | INFO     | . log creation = 0 s
[2026-01-10 22:16:21] 2026-01-11 03:15:47,907 | INFO     | ..............................
[2026-01-10 22:16:21] 2026-01-11 03:15:47,997 | INFO     | 
[2026-01-10 22:16:21] 2026-01-11 03:15:47,997 | INFO     | job summary report
[2026-01-10 22:16:21] 2026-01-11 03:15:47,997 | INFO     | --------------------------------------------------
[2026-01-10 22:16:21] 2026-01-11 03:15:47,997 | INFO     | PanDA job id: 6965803062
[2026-01-10 22:16:21] 2026-01-11 03:15:47,997 | INFO     | task id: 47898826
[2026-01-10 22:16:21] 2026-01-11 03:15:47,997 | INFO     | errors: (none)
[2026-01-10 22:16:21] 2026-01-11 03:15:47,997 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 22:16:21] 2026-01-11 03:15:47,997 | INFO     | pilot state: finished 
[2026-01-10 22:16:21] 2026-01-11 03:15:47,997 | INFO     | transexitcode: 0
[2026-01-10 22:16:21] 2026-01-11 03:15:47,998 | INFO     | exeerrorcode: 0
[2026-01-10 22:16:21] 2026-01-11 03:15:47,998 | INFO     | exeerrordiag: 
[2026-01-10 22:16:21] 2026-01-11 03:15:47,998 | INFO     | exitcode: 0
[2026-01-10 22:16:21] 2026-01-11 03:15:47,998 | INFO     | exitmsg: OK
[2026-01-10 22:16:21] 2026-01-11 03:15:47,998 | INFO     | cpuconsumptiontime: 55458 s
[2026-01-10 22:16:21] 2026-01-11 03:15:47,998 | INFO     | nevents: 400
[2026-01-10 22:16:21] 2026-01-11 03:15:47,998 | INFO     | neventsw: 0
[2026-01-10 22:16:21] 2026-01-11 03:15:47,998 | INFO     | pid: 540835
[2026-01-10 22:16:21] 2026-01-11 03:15:47,998 | INFO     | pgrp: 540835
[2026-01-10 22:16:21] 2026-01-11 03:15:47,998 | INFO     | corecount: 10
[2026-01-10 22:16:21] 2026-01-11 03:15:47,998 | INFO     | event service: False
[2026-01-10 22:16:21] 2026-01-11 03:15:47,998 | INFO     | sizes: {0: 2283090, 1: 2283775, 2: 2283803, 3: 2283974, 4: 2284002, 15: 2284030, 27: 2284186, 38: 2284214, 50: 2284504, 61: 2284532, 15028: 2315701, 15031: 2324699
[2026-01-10 22:16:21] 2026-01-11 03:15:47,998 | INFO     | --------------------------------------------------
[2026-01-10 22:16:21] 2026-01-11 03:15:47,998 | INFO     | 
[2026-01-10 22:16:21] 2026-01-11 03:15:47,998 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 22:16:21] 2026-01-11 03:15:48,019 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 22:16:21] 2026-01-11 03:15:48,019 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 22:16:21] 2026-01-11 03:15:48,019 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 22:16:21] 2026-01-11 03:15:48,019 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 22:16:21] 2026-01-11 03:15:48,019 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 22:16:21] 2026-01-11 03:15:48,019 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 22:16:21] 2026-01-11 03:15:48,019 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 22:16:21] 2026-01-11 03:15:48,020 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 22:16:21] 2026-01-11 03:15:48,020 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 22:16:21] 2026-01-11 03:15:48,020 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 22:16:21] 2026-01-11 03:15:48,020 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 22:16:21] 2026-01-11 03:15:48,020 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 22:16:21] 2026-01-11 03:15:48,020 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 22:16:21] 2026-01-11 03:15:48,020 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 22:16:21] 2026-01-11 03:15:48,020 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 22:16:21] 2026-01-11 03:15:48,020 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 22:16:21] 2026-01-11 03:15:48,020 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 22:16:21] 2026-01-11 03:15:48,020 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 22:16:21] 2026-01-11 03:15:48,020 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 22:16:21] 2026-01-11 03:15:48,020 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 22:16:21] 2026-01-11 03:15:48,021 | INFO     | job 6965803062 has completed (purged errors)
[2026-01-10 22:16:21] 2026-01-11 03:15:48,021 | INFO     | overall cleanup function is called
[2026-01-10 22:16:21] 2026-01-11 03:15:49,028 | INFO     | --- collectZombieJob: --- 10, [540835]
[2026-01-10 22:16:21] 2026-01-11 03:15:49,028 | INFO     | zombie collector waiting for pid 540835
[2026-01-10 22:16:21] 2026-01-11 03:15:49,028 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 22:16:21] 2026-01-11 03:15:49,028 | INFO     | collected zombie processes
[2026-01-10 22:16:21] 2026-01-11 03:15:49,028 | INFO     | will attempt to kill all subprocesses of pid=540835
[2026-01-10 22:16:21] 2026-01-11 03:15:49,293 | INFO     | process IDs to be killed: [540835] (in reverse order)
[2026-01-10 22:16:21] 2026-01-11 03:15:49,385 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 22:16:21] 2026-01-11 03:15:49,385 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 22:16:21] 2026-01-11 03:15:49,398 | INFO     | did not find any defunct processes belonging to 540835
[2026-01-10 22:16:21] 2026-01-11 03:15:49,411 | INFO     | did not find any defunct processes belonging to 540835
[2026-01-10 22:16:21] 2026-01-11 03:15:49,411 | INFO     | ready for new job
[2026-01-10 22:16:21] 2026-01-11 03:15:49,411 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 22:16:21] 2026-01-11 03:15:49,413 | INFO     | ***************************************
[2026-01-10 22:16:21] 2026-01-11 03:15:49,414 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 22:16:21] 2026-01-11 03:15:49,414 | INFO     | ***************************************
[2026-01-10 22:16:21] 2026-01-11 03:15:49,414 | INFO     | 
[2026-01-10 22:16:21] 2026-01-11 03:15:49,417 | INFO     | architecture information:
[2026-01-10 22:16:21] 2026-01-11 03:15:49,418 | INFO     | executing command: cat /etc/os-release
[2026-01-10 22:16:21] 2026-01-11 03:15:49,438 | INFO     | cat /etc/os-release:
[2026-01-10 22:16:21] NAME="CentOS Linux"
[2026-01-10 22:16:21] VERSION="7 (Core)"
[2026-01-10 22:16:21] ID="centos"
[2026-01-10 22:16:21] ID_LIKE="rhel fedora"
[2026-01-10 22:16:21] VERSION_ID="7"
[2026-01-10 22:16:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 22:16:21] ANSI_COLOR="0;31"
[2026-01-10 22:16:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 22:16:21] HOME_URL="https://www.centos.org/"
[2026-01-10 22:16:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 22:16:21] 
[2026-01-10 22:16:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 22:16:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 22:16:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 22:16:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 22:16:21] 
[2026-01-10 22:16:21] 2026-01-11 03:15:49,439 | INFO     | ***************************************
[2026-01-10 22:16:21] 2026-01-11 03:15:49,941 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 22:16:21] 2026-01-11 03:15:49,958 | INFO     | sufficient remaining disk space (76475793408 B)
[2026-01-10 22:16:21] 2026-01-11 03:15:49,958 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 22:16:21] 2026-01-11 03:15:49,958 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 22:16:21] 2026-01-11 03:15:49,959 | INFO     | update_server=False
[2026-01-10 22:16:21] 2026-01-11 03:15:49,959 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 22:16:21] 2026-01-11 03:15:49,959 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 22:16:21] 2026-01-11 03:15:49,978 | INFO     | all job control threads have been joined
[2026-01-10 22:16:21] 2026-01-11 03:15:50,344 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 22:16:21] 2026-01-11 03:15:50,451 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 22:16:21] 2026-01-11 03:15:50,451 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 22:16:21] 2026-01-11 03:15:50,451 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 22:16:21] 2026-01-11 03:15:50,451 | INFO     | will abort loop
[2026-01-10 22:16:21] 2026-01-11 03:15:50,964 | INFO     | [job] retrieve thread has finished
[2026-01-10 22:16:21] 2026-01-11 03:15:50,968 | INFO     | [job] queue monitor thread has finished
[2026-01-10 22:16:21] 2026-01-11 03:15:50,981 | INFO     | all data control threads have been joined
[2026-01-10 22:16:21] 2026-01-11 03:15:50,983 | INFO     | [job] control thread has finished
[2026-01-10 22:16:21] 2026-01-11 03:15:51,062 | INFO     | all payload control threads have been joined
[2026-01-10 22:16:21] 2026-01-11 03:15:51,408 | INFO     | [job] validate thread has finished
[2026-01-10 22:16:21] 2026-01-11 03:15:51,456 | INFO     | [job] job monitor thread has finished
[2026-01-10 22:16:21] 2026-01-11 03:15:51,544 | INFO     | [payload] validate_post thread has finished
[2026-01-10 22:16:21] 2026-01-11 03:15:51,835 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 22:16:21] 2026-01-11 03:15:51,938 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 22:16:21] 2026-01-11 03:15:51,979 | INFO     | [data] copytool_in thread has finished
[2026-01-10 22:16:21] 2026-01-11 03:15:51,986 | INFO     | [data] control thread has finished
[2026-01-10 22:16:21] 2026-01-11 03:15:52,067 | INFO     | [payload] control thread has finished
[2026-01-10 22:16:21] 2026-01-11 03:15:52,324 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 22:16:21] 2026-01-11 03:15:52,349 | INFO     | [data] copytool_out thread has finished
[2026-01-10 22:16:21] 2026-01-11 03:15:52,358 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 22:16:21] 2026-01-11 03:15:52,505 | INFO     | [payload] failed_post thread has finished
[2026-01-10 22:16:21] 2026-01-11 03:15:52,843 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 22:16:21] 2026-01-11 03:15:54,305 | INFO     | [monitor] cgroup control has ended
[2026-01-10 22:16:21] 2026-01-11 03:15:56,850 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 22:16:21] 2026-01-11 03:15:56,950 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140273944098624)>', '<ExcThread(monitor, started 140273598314240)>']
[2026-01-10 22:16:21] 2026-01-11 03:16:01,976 | INFO     | all workflow threads have been joined
[2026-01-10 22:16:21] 2026-01-11 03:16:01,977 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 22:16:21] 2026-01-11 03:16:01,977 | INFO     | traces error code: 0
[2026-01-10 22:16:21] 2026-01-11 03:16:01,978 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 22:16:21] 2026-01-11 03:16:20,804 | INFO     | PID=528440 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 22:16:21] 2026-01-11 03:16:20,805 | INFO     | .. there are 23 such processes running
[2026-01-10 22:16:21] 2026-01-11 03:16:20,805 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 22:16:21] 2026-01-11 03:16:20,805 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 22:16:21] 2026-01-11 03:16:20,805 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 22:16:21] 2026-01-11 03:16:20,805 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 22:16:21] 2026-01-11 03:16:20,805 | INFO     | [monitor] control thread has ended
[2026-01-10 22:16:21] 2026-01-11 03:16:21,017 [wrapper] ==== pilot stdout END ====
[2026-01-10 22:16:21] 2026-01-11 03:16:21,020 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 22:16:21] 2026-01-11 03:16:21,022 [wrapper] pilotpid: 528440
[2026-01-10 22:16:21] 2026-01-11 03:16:21,024 [wrapper] Pilot exit status: 0
[2026-01-10 22:16:21] 2026-01-11 03:16:21,034 [wrapper] pandaids: 6965803062
[2026-01-10 22:16:21] 2026-01-11 03:16:21,094 [wrapper] cleanup supervisor_pilot 1397591 528441
[2026-01-10 22:16:21] 2026-01-11 03:16:21,098 [wrapper] Test setup, not cleaning
[2026-01-10 22:16:21] 2026-01-11 03:16:21,101 [wrapper] apfmon messages muted
[2026-01-10 22:16:21] 2026-01-11 03:16:21,103 [wrapper] ==== wrapper stdout END ====
[2026-01-10 22:16:21] 2026-01-11 03:16:21,106 [wrapper] ==== wrapper stderr END ====
[2026-01-10 22:16:21]  *** Error codes and diagnostics ***
[2026-01-10 22:16:21]     "exeErrorCode": 0,
[2026-01-10 22:16:21]     "exeErrorDiag": "",
[2026-01-10 22:16:21]     "pilotErrorCode": 0,
[2026-01-10 22:16:21]     "pilotErrorDiag": "",
[2026-01-10 22:16:21]  *** Listing of results directory ***
[2026-01-10 22:16:21] total 445324
[2026-01-10 22:16:21] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:00 queuedata.json
[2026-01-10 22:16:21] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 22:16:21] -rwx------. 1 boincer umatlas     36322 Jan 10 18:00 runpilot2-wrapper.sh
[2026-01-10 22:16:21] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 22:16:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:02 run_atlas
[2026-01-10 22:16:21] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:02 job.xml
[2026-01-10 22:16:21] -rw-r--r--. 2 boincer umatlas 225091262 Jan 10 18:02 EVNT.47898824._001399.pool.root.1
[2026-01-10 22:16:21] -rw-r--r--. 2 boincer umatlas    592407 Jan 10 18:02 input.tar.gz
[2026-01-10 22:16:21] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:02 start_atlas.sh
[2026-01-10 22:16:21] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:02 shared
[2026-01-10 22:16:21] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:02 boinc_lockfile
[2026-01-10 22:16:21] -rw-r--r--. 1 boincer umatlas      2518 Jan 10 18:02 pandaJob.out
[2026-01-10 22:16:21] -rw-------. 1 boincer umatlas        57 Jan 10 18:02 setup.sh.local
[2026-01-10 22:16:21] -rw-------. 1 boincer umatlas    989548 Jan 10 18:03 agis_schedconf.cvmfs.json
[2026-01-10 22:16:21] drwx------. 5 boincer umatlas      4096 Jan 10 18:03 pilot3
[2026-01-10 22:16:21] -rw-r--r--. 1 boincer umatlas      6875 Jan 10 22:11 init_data.xml
[2026-01-10 22:16:21] -rw-------. 1 boincer umatlas 222197339 Jan 10 22:15 HITS.47898826._040669.pool.root.1
[2026-01-10 22:16:21] -rw-r--r--. 1 boincer umatlas       531 Jan 10 22:15 boinc_task_state.xml
[2026-01-10 22:16:21] -rw-------. 1 boincer umatlas      1040 Jan 10 22:15 memory_monitor_summary.json
[2026-01-10 22:16:21] -rw-------. 1 boincer umatlas   1516240 Jan 10 22:15 agis_ddmendpoints.agis.ALL.json
[2026-01-10 22:16:21] -rw-------. 1 boincer umatlas    482709 Jan 10 22:15 log.47898826._040669.job.log.tgz.1
[2026-01-10 22:16:21] -rw-------. 1 boincer umatlas        95 Jan 10 22:15 pilot_heartbeat.json
[2026-01-10 22:16:21] -rw-------. 1 boincer umatlas      7820 Jan 10 22:15 heartbeat.json
[2026-01-10 22:16:21] -rw-r--r--. 1 boincer umatlas        28 Jan 10 22:16 wrapper_checkpoint.txt
[2026-01-10 22:16:21] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 22:16 boinc_mmap_file
[2026-01-10 22:16:21] -rw-------. 1 boincer umatlas       822 Jan 10 22:16 pilotlog.txt
[2026-01-10 22:16:21] -rw-------. 1 boincer umatlas   1922606 Jan 10 22:16 log.47898826._040669.job.log.1
[2026-01-10 22:16:21] -rw-------. 1 boincer umatlas       357 Jan 10 22:16 output.list
[2026-01-10 22:16:21] -rw-r--r--. 1 boincer umatlas       620 Jan 10 22:16 runtime_log
[2026-01-10 22:16:21] -rw-------. 1 boincer umatlas   2426880 Jan 10 22:16 result.tar.gz
[2026-01-10 22:16:21] -rw-------. 1 boincer umatlas       656 Jan 10 22:16 VpCODm67wy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmRchKDmgMdZ4m.diag
[2026-01-10 22:16:21] -rw-r--r--. 1 boincer umatlas      9345 Jan 10 22:16 runtime_log.err
[2026-01-10 22:16:21] -rw-r--r--. 1 boincer umatlas     21089 Jan 10 22:16 stderr.txt
[2026-01-10 22:16:21] HITS file was successfully produced:
[2026-01-10 22:16:21] -rw-------. 1 boincer umatlas 222197339 Jan 10 22:15 shared/HITS.pool.root.1
[2026-01-10 22:16:21]  *** Contents of shared directory: ***
[2026-01-10 22:16:21] total 439780
[2026-01-10 22:16:21] -rw-r--r--. 2 boincer umatlas 225091262 Jan 10 18:02 ATLAS.root_0
[2026-01-10 22:16:21] -rw-r--r--. 2 boincer umatlas    592407 Jan 10 18:02 input.tar.gz
[2026-01-10 22:16:21] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:02 start_atlas.sh
[2026-01-10 22:16:21] -rw-------. 1 boincer umatlas 222197339 Jan 10 22:15 HITS.pool.root.1
[2026-01-10 22:16:21] -rw-------. 1 boincer umatlas   2426880 Jan 10 22:16 result.tar.gz
22:16:23 (522371): run_atlas exited; CPU time 55881.291250
22:16:23 (522371): called boinc_finish(0)

</stderr_txt>
]]>

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