Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:57:13 (270262): wrapper (7.7.26015): starting
19:57:13 (270262): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 19:57:13] Arguments: --nthreads 8
[2026-01-10 19:57:13] Threads: 8
[2026-01-10 19:57:13] Checking for CVMFS
[2026-01-10 19:57:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 19:57:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 19:57:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 19:57:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 19:57:14] 2.13.3.0 7976 23700 208544 154998 2 90 21863163 40960001 6577 16776704 0 14158271 99.949 12195249 29523 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 19:57:14] CVMFS is ok
[2026-01-10 19:57:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 19:57:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 19:57:14] Further information can be found at the LHC@home message board.
[2026-01-10 19:57:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 19:57:14] Checking for apptainer binary...
[2026-01-10 19:57:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 19:57:14] Running /usr/bin/apptainer --version
[2026-01-10 19:57:14] apptainer version 1.4.5-2.el9
[2026-01-10 19:57:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 19:57:14] c-211-13.aglt2.org
[2026-01-10 19:57:14] apptainer works
[2026-01-10 19:57:14] Set ATHENA_PROC_NUMBER=8
[2026-01-10 19:57:14] Set ATHENA_CORE_NUMBER=8
[2026-01-10 19:57:14] Starting ATLAS job with PandaID=6965803056
[2026-01-10 19:57:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 07:38:52]  *** The last 200 lines of the pilot log: ***
[2026-01-11 07:38:53] 2026-01-11 12:37:44,748 | INFO     | time since job start (42016s) is within the limit (349056.0s)
[2026-01-11 07:38:53] 2026-01-11 12:37:45,586 | INFO     | monitor loop #2421: job 0:6965803056 is in state 'finished'
[2026-01-11 07:38:53] 2026-01-11 12:37:45,586 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 07:38:53] 2026-01-11 12:37:46,486 | INFO     | PID=273937 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 07:38:53] 2026-01-11 12:37:46,486 | INFO     | .. there are 7 such processes running
[2026-01-11 07:38:53] 2026-01-11 12:37:47,487 | INFO     | time since job start (42019s) is within the limit (349056.0s)
[2026-01-11 07:38:53] 2026-01-11 12:37:48,091 | INFO     | monitor loop #2422: job 0:6965803056 is in state 'finished'
[2026-01-11 07:38:53] 2026-01-11 12:37:48,091 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 07:38:53] 2026-01-11 12:37:49,494 | INFO     | time since job start (42021s) is within the limit (349056.0s)
[2026-01-11 07:38:53] 2026-01-11 12:37:49,752 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 07:38:53] 2026-01-11 12:37:49,761 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2708.42475
[2026-01-11 07:38:53] 2026-01-11 12:37:49,771 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965803056/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 07:38:53] 2026-01-11 12:37:49,771 | INFO     | extracted standard info from prmon json
[2026-01-11 07:38:53] 2026-01-11 12:37:49,771 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 07:38:53] 2026-01-11 12:37:49,772 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 07:38:53] 2026-01-11 12:37:49,772 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 07:38:53] 2026-01-11 12:37:49,772 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 07:38:53] 2026-01-11 12:37:49,785 | INFO     | fitting pss+swap vs Time
[2026-01-11 07:38:53] 2026-01-11 12:37:49,787 | INFO     | sum of square deviations: 100977500971.85924
[2026-01-11 07:38:53] 2026-01-11 12:37:49,799 | INFO     | sum of deviations: 167171879421.07123
[2026-01-11 07:38:53] 2026-01-11 12:37:49,800 | INFO     | mean x: 1768114034.4055233
[2026-01-11 07:38:53] 2026-01-11 12:37:49,800 | INFO     | mean y: 2543370.4549418604
[2026-01-11 07:38:53] 2026-01-11 12:37:49,800 | INFO     | intersect: -2924632914.534691
[2026-01-11 07:38:53] 2026-01-11 12:37:49,801 | INFO     | chi2: 1.5390527692876703
[2026-01-11 07:38:53] 2026-01-11 12:37:49,802 | INFO     | sum of square deviations: 98792012792.72974
[2026-01-11 07:38:53] 2026-01-11 12:37:49,816 | INFO     | sum of deviations: 164703350188.56232
[2026-01-11 07:38:53] 2026-01-11 12:37:49,816 | INFO     | mean x: 1768113881.9121523
[2026-01-11 07:38:53] 2026-01-11 12:37:49,816 | INFO     | mean y: 2543198.2093704245
[2026-01-11 07:38:53] 2026-01-11 12:37:49,817 | INFO     | intersect: -2945208058.5325756
[2026-01-11 07:38:53] 2026-01-11 12:37:49,817 | INFO     | chi2: 1.5391521514490818
[2026-01-11 07:38:53] 2026-01-11 12:37:49,818 | INFO     | current chi2=1.5391521514490818 (change=-0.00645735892847093 %)
[2026-01-11 07:38:53] 2026-01-11 12:37:49,818 | INFO     | right removable region: 682
[2026-01-11 07:38:53] 2026-01-11 12:37:49,819 | INFO     | sum of square deviations: 98791632762.72961
[2026-01-11 07:38:53] 2026-01-11 12:37:49,831 | INFO     | sum of deviations: 73749701215.98822
[2026-01-11 07:38:53] 2026-01-11 12:37:49,832 | INFO     | mean x: 1768114186.9121523
[2026-01-11 07:38:53] 2026-01-11 12:37:49,832 | INFO     | mean y: 2549862.2664714493
[2026-01-11 07:38:53] 2026-01-11 12:37:49,832 | INFO     | intersect: -1317378651.4539275
[2026-01-11 07:38:53] 2026-01-11 12:37:49,833 | INFO     | chi2: 0.24352556783116294
[2026-01-11 07:38:53] 2026-01-11 12:37:49,833 | INFO     | current chi2=0.24352556783116294 (change=84.17691890162574 %)
[2026-01-11 07:38:53] 2026-01-11 12:37:49,834 | INFO     | sum of square deviations: 96637574132.87376
[2026-01-11 07:38:53] 2026-01-11 12:37:49,846 | INFO     | sum of deviations: 94096239591.02652
[2026-01-11 07:38:53] 2026-01-11 12:37:49,847 | INFO     | mean x: 1768114339.4174042
[2026-01-11 07:38:53] 2026-01-11 12:37:49,847 | INFO     | mean y: 2548417.946902655
[2026-01-11 07:38:53] 2026-01-11 12:37:49,847 | INFO     | intersect: -1719068789.428273
[2026-01-11 07:38:53] 2026-01-11 12:37:49,848 | INFO     | chi2: 0.1936696121696503
[2026-01-11 07:38:53] 2026-01-11 12:37:49,848 | INFO     | current chi2=0.1936696121696503 (change=20.472575469397086 %)
[2026-01-11 07:38:53] 2026-01-11 12:37:49,848 | INFO     | left removable region: 20
[2026-01-11 07:38:53] 2026-01-11 12:37:49,849 | INFO     | sum of square deviations: 89956053615.87317
[2026-01-11 07:38:53] 2026-01-11 12:37:49,861 | INFO     | sum of deviations: 148198628165.8852
[2026-01-11 07:38:53] 2026-01-11 12:37:49,862 | INFO     | mean x: 1768114461.4259818
[2026-01-11 07:38:53] 2026-01-11 12:37:49,862 | INFO     | mean y: 2544109.599697885
[2026-01-11 07:38:53] 2026-01-11 12:37:49,862 | INFO     | intersect: -2910346430.73584
[2026-01-11 07:38:53] 2026-01-11 12:37:49,863 | INFO     | chi2: 0.011208343708911194
[2026-01-11 07:38:53] 2026-01-11 12:37:49,863 | INFO     | current memory leak: 1.65 B/s (using 662 data points, chi2=0.01)
[2026-01-11 07:38:53] 2026-01-11 12:37:49,864 | INFO     | could have reported an average CPU frequency of 2700 MHz (26 samples)
[2026-01-11 07:38:53] 2026-01-11 12:37:49,864 | INFO     | ..............................
[2026-01-11 07:38:53] 2026-01-11 12:37:49,865 | INFO     | . Timing measurements:
[2026-01-11 07:38:53] 2026-01-11 12:37:49,865 | INFO     | . get job = 0 s
[2026-01-11 07:38:53] 2026-01-11 12:37:49,865 | INFO     | . initial setup = 2 s
[2026-01-11 07:38:53] 2026-01-11 12:37:49,865 | INFO     | . payload setup = 7 s
[2026-01-11 07:38:53] 2026-01-11 12:37:49,865 | INFO     | . stage-in = 0 s
[2026-01-11 07:38:53] 2026-01-11 12:37:49,865 | INFO     | . payload execution = 41965 s
[2026-01-11 07:38:53] 2026-01-11 12:37:49,865 | INFO     | . stage-out = 4 s
[2026-01-11 07:38:53] 2026-01-11 12:37:49,865 | INFO     | . log creation = 1 s
[2026-01-11 07:38:53] 2026-01-11 12:37:49,866 | INFO     | ..............................
[2026-01-11 07:38:53] 2026-01-11 12:37:50,209 | INFO     | 
[2026-01-11 07:38:53] 2026-01-11 12:37:50,210 | INFO     | job summary report
[2026-01-11 07:38:53] 2026-01-11 12:37:50,210 | INFO     | --------------------------------------------------
[2026-01-11 07:38:53] 2026-01-11 12:37:50,211 | INFO     | PanDA job id: 6965803056
[2026-01-11 07:38:53] 2026-01-11 12:37:50,211 | INFO     | task id: 47898826
[2026-01-11 07:38:53] 2026-01-11 12:37:50,211 | INFO     | errors: (none)
[2026-01-11 07:38:53] 2026-01-11 12:37:50,211 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 07:38:53] 2026-01-11 12:37:50,211 | INFO     | pilot state: finished 
[2026-01-11 07:38:53] 2026-01-11 12:37:50,211 | INFO     | transexitcode: 0
[2026-01-11 07:38:53] 2026-01-11 12:37:50,211 | INFO     | exeerrorcode: 0
[2026-01-11 07:38:53] 2026-01-11 12:37:50,211 | INFO     | exeerrordiag: 
[2026-01-11 07:38:53] 2026-01-11 12:37:50,211 | INFO     | exitcode: 0
[2026-01-11 07:38:53] 2026-01-11 12:37:50,212 | INFO     | exitmsg: OK
[2026-01-11 07:38:53] 2026-01-11 12:37:50,212 | INFO     | cpuconsumptiontime: 71796 s
[2026-01-11 07:38:53] 2026-01-11 12:37:50,212 | INFO     | nevents: 400
[2026-01-11 07:38:53] 2026-01-11 12:37:50,212 | INFO     | neventsw: 0
[2026-01-11 07:38:53] 2026-01-11 12:37:50,212 | INFO     | pid: 280414
[2026-01-11 07:38:53] 2026-01-11 12:37:50,212 | INFO     | pgrp: 280414
[2026-01-11 07:38:53] 2026-01-11 12:37:50,212 | INFO     | corecount: 8
[2026-01-11 07:38:53] 2026-01-11 12:37:50,212 | INFO     | event service: False
[2026-01-11 07:38:53] 2026-01-11 12:37:50,212 | INFO     | sizes: {0: 2283092, 1: 2283948, 2: 2283948, 9: 2284238, 12: 2284266, 41977: 2327296, 41982: 2336322, 41983: 2336378, 42004: 2336572}
[2026-01-11 07:38:53] 2026-01-11 12:37:50,213 | INFO     | --------------------------------------------------
[2026-01-11 07:38:53] 2026-01-11 12:37:50,213 | INFO     | 
[2026-01-11 07:38:53] 2026-01-11 12:37:50,213 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-11 07:38:53] 2026-01-11 12:37:50,339 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 07:38:53] 2026-01-11 12:37:50,339 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 07:38:53] 2026-01-11 12:37:50,339 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 07:38:53] 2026-01-11 12:37:50,339 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 07:38:53] 2026-01-11 12:37:50,339 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 07:38:53] 2026-01-11 12:37:50,339 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 07:38:53] 2026-01-11 12:37:50,340 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 07:38:53] 2026-01-11 12:37:50,340 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 07:38:53] 2026-01-11 12:37:50,340 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 07:38:53] 2026-01-11 12:37:50,340 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 07:38:53] 2026-01-11 12:37:50,340 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 07:38:53] 2026-01-11 12:37:50,340 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 07:38:53] 2026-01-11 12:37:50,340 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 07:38:53] 2026-01-11 12:37:50,340 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 07:38:53] 2026-01-11 12:37:50,340 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 07:38:53] 2026-01-11 12:37:50,340 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 07:38:53] 2026-01-11 12:37:50,341 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 07:38:53] 2026-01-11 12:37:50,341 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 07:38:53] 2026-01-11 12:37:50,341 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 07:38:53] 2026-01-11 12:37:50,341 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 07:38:53] 2026-01-11 12:37:50,341 | INFO     | job 6965803056 has completed (purged errors)
[2026-01-11 07:38:53] 2026-01-11 12:37:50,341 | INFO     | overall cleanup function is called
[2026-01-11 07:38:53] 2026-01-11 12:37:51,354 | INFO     | --- collectZombieJob: --- 10, [280414]
[2026-01-11 07:38:53] 2026-01-11 12:37:51,354 | INFO     | zombie collector waiting for pid 280414
[2026-01-11 07:38:53] 2026-01-11 12:37:51,355 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 07:38:53] 2026-01-11 12:37:51,355 | INFO     | collected zombie processes
[2026-01-11 07:38:53] 2026-01-11 12:37:51,355 | INFO     | will attempt to kill all subprocesses of pid=280414
[2026-01-11 07:38:53] 2026-01-11 12:37:51,755 | INFO     | process IDs to be killed: [280414] (in reverse order)
[2026-01-11 07:38:53] 2026-01-11 12:37:51,839 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 07:38:53] 2026-01-11 12:37:51,840 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 07:38:53] 2026-01-11 12:37:51,859 | INFO     | did not find any defunct processes belonging to 280414
[2026-01-11 07:38:53] 2026-01-11 12:37:51,877 | INFO     | did not find any defunct processes belonging to 280414
[2026-01-11 07:38:53] 2026-01-11 12:37:51,878 | INFO     | ready for new job
[2026-01-11 07:38:53] 2026-01-11 12:37:51,878 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 07:38:53] 2026-01-11 12:37:51,882 | INFO     | ***************************************
[2026-01-11 07:38:53] 2026-01-11 12:37:51,882 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 07:38:53] 2026-01-11 12:37:51,882 | INFO     | ***************************************
[2026-01-11 07:38:53] 2026-01-11 12:37:51,882 | INFO     | 
[2026-01-11 07:38:53] 2026-01-11 12:37:51,892 | INFO     | architecture information:
[2026-01-11 07:38:53] 2026-01-11 12:37:51,900 | INFO     | executing command: cat /etc/os-release
[2026-01-11 07:38:53] 2026-01-11 12:37:51,981 | INFO     | cat /etc/os-release:
[2026-01-11 07:38:53] NAME="CentOS Linux"
[2026-01-11 07:38:53] VERSION="7 (Core)"
[2026-01-11 07:38:53] ID="centos"
[2026-01-11 07:38:53] ID_LIKE="rhel fedora"
[2026-01-11 07:38:53] VERSION_ID="7"
[2026-01-11 07:38:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 07:38:53] ANSI_COLOR="0;31"
[2026-01-11 07:38:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 07:38:53] HOME_URL="https://www.centos.org/"
[2026-01-11 07:38:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 07:38:53] 
[2026-01-11 07:38:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 07:38:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 07:38:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 07:38:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 07:38:53] 
[2026-01-11 07:38:53] 2026-01-11 12:37:51,981 | INFO     | ***************************************
[2026-01-11 07:38:53] 2026-01-11 12:37:52,484 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-11 07:38:53] 2026-01-11 12:37:52,555 | INFO     | sufficient remaining disk space (64486375424 B)
[2026-01-11 07:38:53] 2026-01-11 12:37:52,555 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 07:38:53] 2026-01-11 12:37:52,555 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 07:38:53] 2026-01-11 12:37:52,555 | INFO     | update_server=False
[2026-01-11 07:38:53] 2026-01-11 12:37:52,555 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 07:38:53] 2026-01-11 12:37:52,556 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:38:53] 2026-01-11 12:37:52,556 | INFO     | aborting loop
[2026-01-11 07:38:53] 2026-01-11 12:37:52,679 | INFO     | all data control threads have been joined
[2026-01-11 07:38:53] 2026-01-11 12:37:52,935 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 07:38:53] 2026-01-11 12:37:53,388 | INFO     | all payload control threads have been joined
[2026-01-11 07:38:53] 2026-01-11 12:37:53,410 | INFO     | all job control threads have been joined
[2026-01-11 07:38:53] 2026-01-11 12:37:53,561 | INFO     | [job] retrieve thread has finished
[2026-01-11 07:38:53] 2026-01-11 12:37:53,562 | INFO     | [job] job monitor thread has finished
[2026-01-11 07:38:53] 2026-01-11 12:37:53,684 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 07:38:53] 2026-01-11 12:37:53,686 | INFO     | [data] control thread has finished
[2026-01-11 07:38:53] 2026-01-11 12:37:53,769 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 07:38:53] 2026-01-11 12:37:53,979 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 07:38:53] 2026-01-11 12:37:53,983 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 07:38:53] 2026-01-11 12:37:54,394 | INFO     | [payload] control thread has finished
[2026-01-11 07:38:53] 2026-01-11 12:37:54,416 | INFO     | [job] control thread has finished
[2026-01-11 07:38:53] 2026-01-11 12:37:54,459 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 07:38:53] 2026-01-11 12:37:54,885 | INFO     | [payload] failed_post thread has finished
[2026-01-11 07:38:53] 2026-01-11 12:37:54,915 | INFO     | [payload] validate_post thread has finished
[2026-01-11 07:38:53] 2026-01-11 12:37:54,975 | INFO     | [data] copytool_in thread has finished
[2026-01-11 07:38:53] 2026-01-11 12:37:54,977 | INFO     | [job] validate thread has finished
[2026-01-11 07:38:53] 2026-01-11 12:37:54,990 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:38:53] 2026-01-11 12:37:55,691 | INFO     | [data] copytool_out thread has finished
[2026-01-11 07:38:53] 2026-01-11 12:37:55,997 | INFO     | [job] queue monitor thread has finished
[2026-01-11 07:38:53] 2026-01-11 12:37:56,946 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 07:38:53] 2026-01-11 12:38:23,231 | INFO     | PID=273937 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 07:38:53] 2026-01-11 12:38:23,231 | INFO     | .. there are 7 such processes running
[2026-01-11 07:38:53] 2026-01-11 12:38:23,231 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 07:38:53] 2026-01-11 12:38:23,231 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 07:38:53] 2026-01-11 12:38:23,231 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 07:38:53] 2026-01-11 12:38:45,728 | INFO     | [monitor] cgroup control has ended
[2026-01-11 07:38:53] 2026-01-11 12:38:47,583 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140092872771392)>', '<ExcThread(monitor, started 140092412774144)>']
[2026-01-11 07:38:53] 2026-01-11 12:38:48,380 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 07:38:53] 2026-01-11 12:38:48,380 | INFO     | [monitor] control thread has ended
[2026-01-11 07:38:53] 2026-01-11 12:38:52,609 | INFO     | all workflow threads have been joined
[2026-01-11 07:38:53] 2026-01-11 12:38:52,609 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 07:38:53] 2026-01-11 12:38:52,610 | INFO     | traces error code: 0
[2026-01-11 07:38:53] 2026-01-11 12:38:52,610 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 07:38:53] 2026-01-11 12:38:52,836 [wrapper] ==== pilot stdout END ====
[2026-01-11 07:38:53] 2026-01-11 12:38:52,839 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 07:38:53] 2026-01-11 12:38:52,842 [wrapper] pilotpid: 273937
[2026-01-11 07:38:53] 2026-01-11 12:38:52,844 [wrapper] Pilot exit status: 0
[2026-01-11 07:38:53] 2026-01-11 12:38:52,858 [wrapper] pandaids: 6965803056
[2026-01-11 07:38:53] 2026-01-11 12:38:52,912 [wrapper] cleanup supervisor_pilot 1247037 273938
[2026-01-11 07:38:53] 2026-01-11 12:38:52,914 [wrapper] Test setup, not cleaning
[2026-01-11 07:38:53] 2026-01-11 12:38:52,917 [wrapper] apfmon messages muted
[2026-01-11 07:38:53] 2026-01-11 12:38:52,919 [wrapper] ==== wrapper stdout END ====
[2026-01-11 07:38:53] 2026-01-11 12:38:52,922 [wrapper] ==== wrapper stderr END ====
[2026-01-11 07:38:53]  *** Error codes and diagnostics ***
[2026-01-11 07:38:53]     "exeErrorCode": 0,
[2026-01-11 07:38:53]     "exeErrorDiag": "",
[2026-01-11 07:38:53]     "pilotErrorCode": 0,
[2026-01-11 07:38:53]     "pilotErrorDiag": "",
[2026-01-11 07:38:53]  *** Listing of results directory ***
[2026-01-11 07:38:53] total 452264
[2026-01-11 07:38:53] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:00 queuedata.json
[2026-01-11 07:38:53] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-11 07:38:53] -rwx------. 1 boincer umatlas     36322 Jan 10 18:00 runpilot2-wrapper.sh
[2026-01-11 07:38:53] -rw-r--r--. 1 boincer umatlas       100 Jan 10 19:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 07:38:53] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 19:57 run_atlas
[2026-01-11 07:38:53] -rw-r--r--. 1 boincer umatlas       105 Jan 10 19:57 job.xml
[2026-01-11 07:38:53] -rw-r--r--. 2 boincer umatlas 225168675 Jan 10 19:57 EVNT.47898824._001306.pool.root.1
[2026-01-11 07:38:53] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 19:57 start_atlas.sh
[2026-01-11 07:38:53] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 19:57 shared
[2026-01-11 07:38:53] -rw-r--r--. 2 boincer umatlas    592409 Jan 10 19:57 input.tar.gz
[2026-01-11 07:38:53] -rw-r--r--. 1 boincer umatlas         0 Jan 10 19:57 boinc_lockfile
[2026-01-11 07:38:53] -rw-r--r--. 1 boincer umatlas      2519 Jan 10 19:57 pandaJob.out
[2026-01-11 07:38:53] -rw-------. 1 boincer umatlas        57 Jan 10 19:57 setup.sh.local
[2026-01-11 07:38:53] -rw-------. 1 boincer umatlas    989540 Jan 10 19:57 agis_schedconf.cvmfs.json
[2026-01-11 07:38:53] drwx------. 5 boincer umatlas      4096 Jan 10 19:57 pilot3
[2026-01-11 07:38:53] -rw-------. 1 boincer umatlas 222296865 Jan 11 07:36 HITS.47898826._040663.pool.root.1
[2026-01-11 07:38:53] -rw-r--r--. 1 boincer umatlas       531 Jan 11 07:36 boinc_task_state.xml
[2026-01-11 07:38:53] -rw-------. 1 boincer umatlas      1039 Jan 11 07:37 memory_monitor_summary.json
[2026-01-11 07:38:53] -rw-------. 1 boincer umatlas   1516240 Jan 11 07:37 agis_ddmendpoints.agis.ALL.json
[2026-01-11 07:38:53] -rw-------. 1 boincer umatlas        95 Jan 11 07:37 pilot_heartbeat.json
[2026-01-11 07:38:53] -rw-------. 1 boincer umatlas    789355 Jan 11 07:37 log.47898826._040663.job.log.tgz.1
[2026-01-11 07:38:53] -rw-------. 1 boincer umatlas      7822 Jan 11 07:37 heartbeat.json
[2026-01-11 07:38:53] -rw-r--r--. 1 boincer umatlas      6615 Jan 11 07:38 init_data.xml
[2026-01-11 07:38:53] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 07:38 boinc_mmap_file
[2026-01-11 07:38:53] -rw-r--r--. 1 boincer umatlas        28 Jan 11 07:38 wrapper_checkpoint.txt
[2026-01-11 07:38:53] -rw-------. 1 boincer umatlas      4822 Jan 11 07:38 pilotlog.txt
[2026-01-11 07:38:53] -rw-------. 1 boincer umatlas   5081704 Jan 11 07:38 log.47898826._040663.job.log.1
[2026-01-11 07:38:53] -rw-------. 1 boincer umatlas       357 Jan 11 07:38 output.list
[2026-01-11 07:38:53] -rw-r--r--. 1 boincer umatlas       620 Jan 11 07:38 runtime_log
[2026-01-11 07:38:53] -rw-------. 1 boincer umatlas   5888000 Jan 11 07:38 result.tar.gz
[2026-01-11 07:38:53] -rw-r--r--. 1 boincer umatlas      9343 Jan 11 07:38 runtime_log.err
[2026-01-11 07:38:53] -rw-------. 1 boincer umatlas       658 Jan 11 07:38 3n4NDm67wy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLchKDmyMz9Wm.diag
[2026-01-11 07:38:53] -rw-r--r--. 1 boincer umatlas     21472 Jan 11 07:38 stderr.txt
[2026-01-11 07:38:53] HITS file was successfully produced:
[2026-01-11 07:38:53] -rw-------. 1 boincer umatlas 222296865 Jan 11 07:36 shared/HITS.pool.root.1
[2026-01-11 07:38:53]  *** Contents of shared directory: ***
[2026-01-11 07:38:53] total 443332
[2026-01-11 07:38:53] -rw-r--r--. 2 boincer umatlas 225168675 Jan 10 19:57 ATLAS.root_0
[2026-01-11 07:38:53] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 19:57 start_atlas.sh
[2026-01-11 07:38:53] -rw-r--r--. 2 boincer umatlas    592409 Jan 10 19:57 input.tar.gz
[2026-01-11 07:38:53] -rw-------. 1 boincer umatlas 222296865 Jan 11 07:36 HITS.pool.root.1
[2026-01-11 07:38:53] -rw-------. 1 boincer umatlas   5888000 Jan 11 07:38 result.tar.gz
07:38:54 (270262): run_atlas exited; CPU time 72940.517629
07:38:54 (270262): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN