Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:01:21 (3844610): wrapper (7.7.26015): starting
18:01:21 (3844610): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 18:01:21] Arguments: --nthreads 8
[2026-01-10 18:01:21] Threads: 8
[2026-01-10 18:01:21] Checking for CVMFS
[2026-01-10 18:01:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:01:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:01:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:01:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:01:22] 2.13.3.0 22787 95432 229116 154994 0 364 26571952 40960001 35238 16776704 0 1132810794 99.713 838030787 49914 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 18:01:22] CVMFS is ok
[2026-01-10 18:01:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:01:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:01:22] Further information can be found at the LHC@home message board.
[2026-01-10 18:01:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:01:22] Checking for apptainer binary...
[2026-01-10 18:01:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:01:22] Running /usr/bin/apptainer --version
[2026-01-10 18:01:22] apptainer version 1.4.5-2.el9
[2026-01-10 18:01:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:01:23] c8-6-11.aglt2.org
[2026-01-10 18:01:23] apptainer works
[2026-01-10 18:01:23] Set ATHENA_PROC_NUMBER=8
[2026-01-10 18:01:23] Set ATHENA_CORE_NUMBER=8
[2026-01-10 18:01:23] Starting ATLAS job with PandaID=6965803006
[2026-01-10 18:01:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 20:25:19]  *** The last 200 lines of the pilot log: ***
[2026-01-10 20:25:19] 2026-01-11 01:24:30,119 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.121117187501
[2026-01-10 20:25:19] 2026-01-11 01:24:30,193 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6965803006/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 20:25:19] 2026-01-11 01:24:30,194 | INFO     | extracted standard info from prmon json
[2026-01-10 20:25:19] 2026-01-11 01:24:30,194 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 20:25:19] 2026-01-11 01:24:30,194 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 20:25:19] 2026-01-11 01:24:30,194 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 20:25:19] 2026-01-11 01:24:30,194 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 20:25:19] 2026-01-11 01:24:30,196 | INFO     | fitting pss+swap vs Time
[2026-01-10 20:25:19] 2026-01-11 01:24:30,196 | INFO     | sum of square deviations: 832752363.7410053
[2026-01-10 20:25:19] 2026-01-11 01:24:30,196 | INFO     | sum of deviations: 11787827509.697828
[2026-01-10 20:25:19] 2026-01-11 01:24:30,196 | INFO     | mean x: 1768090401.0431654
[2026-01-10 20:25:19] 2026-01-11 01:24:30,196 | INFO     | mean y: 2508945.0503597124
[2026-01-10 20:25:19] 2026-01-11 01:24:30,196 | INFO     | intersect: -25025273114.21661
[2026-01-10 20:25:19] 2026-01-11 01:24:30,197 | INFO     | chi2: 2.1108418650576066
[2026-01-10 20:25:19] 2026-01-11 01:24:30,197 | INFO     | sum of square deviations: 746082801.231344
[2026-01-10 20:25:19] 2026-01-11 01:24:30,197 | INFO     | sum of deviations: 20092370056.6791
[2026-01-10 20:25:19] 2026-01-11 01:24:30,197 | INFO     | mean x: 1768090248.5447762
[2026-01-10 20:25:19] 2026-01-11 01:24:30,197 | INFO     | mean y: 2523094.470149254
[2026-01-10 20:25:19] 2026-01-11 01:24:30,197 | INFO     | intersect: -47613000958.27076
[2026-01-10 20:25:19] 2026-01-11 01:24:30,197 | INFO     | chi2: 1.3979606424276774
[2026-01-10 20:25:19] 2026-01-11 01:24:30,197 | INFO     | current chi2=1.3979606424276774 (change=33.772365160593125 %)
[2026-01-10 20:25:19] 2026-01-11 01:24:30,197 | INFO     | sum of square deviations: 665645913.7209312
[2026-01-10 20:25:19] 2026-01-11 01:24:30,198 | INFO     | sum of deviations: 19190392996.37208
[2026-01-10 20:25:19] 2026-01-11 01:24:30,198 | INFO     | mean x: 1768090096.0465117
[2026-01-10 20:25:19] 2026-01-11 01:24:30,198 | INFO     | mean y: 2521383.2713178294
[2026-01-10 20:25:19] 2026-01-11 01:24:30,198 | INFO     | intersect: -50971041432.515686
[2026-01-10 20:25:19] 2026-01-11 01:24:30,198 | INFO     | chi2: 1.3996242936897259
[2026-01-10 20:25:19] 2026-01-11 01:24:30,198 | INFO     | current chi2=1.3996242936897259 (change=-0.11900558653492638 %)
[2026-01-10 20:25:19] 2026-01-11 01:24:30,198 | INFO     | right removable region: 128
[2026-01-10 20:25:19] 2026-01-11 01:24:30,198 | INFO     | sum of square deviations: 746079141.231344
[2026-01-10 20:25:19] 2026-01-11 01:24:30,198 | INFO     | sum of deviations: -5627789842.470148
[2026-01-10 20:25:19] 2026-01-11 01:24:30,198 | INFO     | mean x: 1768090553.5447762
[2026-01-10 20:25:19] 2026-01-11 01:24:30,198 | INFO     | mean y: 2538878.8283582088
[2026-01-10 20:25:19] 2026-01-11 01:24:30,199 | INFO     | intersect: 13339518172.183622
[2026-01-10 20:25:19] 2026-01-11 01:24:30,199 | INFO     | chi2: 0.7457017201168784
[2026-01-10 20:25:19] 2026-01-11 01:24:30,199 | INFO     | current chi2=0.7457017201168784 (change=64.67278139300466 %)
[2026-01-10 20:25:19] 2026-01-11 01:24:30,199 | INFO     | sum of square deviations: 665638593.7209312
[2026-01-10 20:25:19] 2026-01-11 01:24:30,199 | INFO     | sum of deviations: -5929555411.023255
[2026-01-10 20:25:19] 2026-01-11 01:24:30,199 | INFO     | mean x: 1768090706.0465117
[2026-01-10 20:25:19] 2026-01-11 01:24:30,199 | INFO     | mean y: 2539489.1705426355
[2026-01-10 20:25:19] 2026-01-11 01:24:30,199 | INFO     | intersect: 15752815858.53237
[2026-01-10 20:25:19] 2026-01-11 01:24:30,199 | INFO     | chi2: 0.7417910869376119
[2026-01-10 20:25:19] 2026-01-11 01:24:30,199 | INFO     | current chi2=0.7417910869376119 (change=0.5244232477636775 %)
[2026-01-10 20:25:19] 2026-01-11 01:24:30,199 | INFO     | left removable region: 20
[2026-01-10 20:25:19] 2026-01-11 01:24:30,199 | INFO     | sum of square deviations: 390608686.6666667
[2026-01-10 20:25:19] 2026-01-11 01:24:30,200 | INFO     | sum of deviations: 907337938.7777783
[2026-01-10 20:25:19] 2026-01-11 01:24:30,200 | INFO     | mean x: 1768090675.5555556
[2026-01-10 20:25:19] 2026-01-11 01:24:30,200 | INFO     | mean y: 2558558.287037037
[2026-01-10 20:25:19] 2026-01-11 01:24:30,200 | INFO     | intersect: -4104507679.3356028
[2026-01-10 20:25:19] 2026-01-11 01:24:30,200 | INFO     | chi2: 0.0006045633276051726
[2026-01-10 20:25:19] 2026-01-11 01:24:30,202 | INFO     | current memory leak: 2.32 B/s (using 108 data points, chi2=0.00)
[2026-01-10 20:25:19] 2026-01-11 01:24:30,202 | INFO     | could have reported an average CPU frequency of 3800 MHz (8 samples)
[2026-01-10 20:25:19] 2026-01-11 01:24:30,202 | INFO     | ..............................
[2026-01-10 20:25:19] 2026-01-11 01:24:30,202 | INFO     | . Timing measurements:
[2026-01-10 20:25:19] 2026-01-11 01:24:30,202 | INFO     | . get job = 0 s
[2026-01-10 20:25:19] 2026-01-11 01:24:30,202 | INFO     | . initial setup = 3 s
[2026-01-10 20:25:19] 2026-01-11 01:24:30,202 | INFO     | . payload setup = 22 s
[2026-01-10 20:25:19] 2026-01-11 01:24:30,202 | INFO     | . stage-in = 0 s
[2026-01-10 20:25:19] 2026-01-11 01:24:30,202 | INFO     | . payload execution = 8457 s
[2026-01-10 20:25:19] 2026-01-11 01:24:30,202 | INFO     | . stage-out = 1 s
[2026-01-10 20:25:19] 2026-01-11 01:24:30,202 | INFO     | . log creation = 0 s
[2026-01-10 20:25:19] 2026-01-11 01:24:30,202 | INFO     | ..............................
[2026-01-10 20:25:19] 2026-01-11 01:24:30,883 | INFO     | 
[2026-01-10 20:25:19] 2026-01-11 01:24:30,886 | INFO     | job summary report
[2026-01-10 20:25:19] 2026-01-11 01:24:30,886 | INFO     | --------------------------------------------------
[2026-01-10 20:25:19] 2026-01-11 01:24:30,886 | INFO     | PanDA job id: 6965803006
[2026-01-10 20:25:19] 2026-01-11 01:24:30,886 | INFO     | task id: 47898826
[2026-01-10 20:25:19] 2026-01-11 01:24:30,886 | INFO     | errors: (none)
[2026-01-10 20:25:19] 2026-01-11 01:24:30,886 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 20:25:19] 2026-01-11 01:24:30,886 | INFO     | pilot state: finished 
[2026-01-10 20:25:19] 2026-01-11 01:24:30,886 | INFO     | transexitcode: 0
[2026-01-10 20:25:19] 2026-01-11 01:24:30,886 | INFO     | exeerrorcode: 0
[2026-01-10 20:25:19] 2026-01-11 01:24:30,886 | INFO     | exeerrordiag: 
[2026-01-10 20:25:19] 2026-01-11 01:24:30,886 | INFO     | exitcode: 0
[2026-01-10 20:25:19] 2026-01-11 01:24:30,886 | INFO     | exitmsg: OK
[2026-01-10 20:25:19] 2026-01-11 01:24:30,886 | INFO     | cpuconsumptiontime: 31486 s
[2026-01-10 20:25:19] 2026-01-11 01:24:30,886 | INFO     | nevents: 400
[2026-01-10 20:25:19] 2026-01-11 01:24:30,886 | INFO     | neventsw: 0
[2026-01-10 20:25:19] 2026-01-11 01:24:30,886 | INFO     | pid: 3865996
[2026-01-10 20:25:19] 2026-01-11 01:24:30,886 | INFO     | pgrp: 3865996
[2026-01-10 20:25:19] 2026-01-11 01:24:30,886 | INFO     | corecount: 8
[2026-01-10 20:25:19] 2026-01-11 01:24:30,886 | INFO     | event service: False
[2026-01-10 20:25:19] 2026-01-11 01:24:30,886 | INFO     | sizes: {0: 2283918, 11: 2283918, 13: 2284208, 21: 2284264, 8483: 2312104, 8485: 2321286, 8515: 2321424}
[2026-01-10 20:25:19] 2026-01-11 01:24:30,886 | INFO     | --------------------------------------------------
[2026-01-10 20:25:19] 2026-01-11 01:24:30,886 | INFO     | 
[2026-01-10 20:25:19] 2026-01-11 01:24:30,901 | INFO     | PID=3851977 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 20:25:19] 2026-01-11 01:24:30,901 | INFO     | .. there are 40 such processes running
[2026-01-10 20:25:19] 2026-01-11 01:24:30,901 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-10 20:25:19] 2026-01-11 01:24:31,082 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 20:25:19] 2026-01-11 01:24:31,082 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 20:25:19] 2026-01-11 01:24:31,082 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 20:25:19] 2026-01-11 01:24:31,082 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 20:25:19] 2026-01-11 01:24:31,082 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 20:25:19] 2026-01-11 01:24:31,082 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 20:25:19] 2026-01-11 01:24:31,082 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 20:25:19] 2026-01-11 01:24:31,082 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 20:25:19] 2026-01-11 01:24:31,083 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 20:25:19] 2026-01-11 01:24:31,083 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 20:25:19] 2026-01-11 01:24:31,083 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 20:25:19] 2026-01-11 01:24:31,083 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 20:25:19] 2026-01-11 01:24:31,083 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 20:25:19] 2026-01-11 01:24:31,083 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 20:25:19] 2026-01-11 01:24:31,083 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 20:25:19] 2026-01-11 01:24:31,083 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 20:25:19] 2026-01-11 01:24:31,083 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 20:25:19] 2026-01-11 01:24:31,083 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 20:25:19] 2026-01-11 01:24:31,083 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 20:25:19] 2026-01-11 01:24:31,083 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 20:25:19] 2026-01-11 01:24:31,083 | INFO     | job 6965803006 has completed (purged errors)
[2026-01-10 20:25:19] 2026-01-11 01:24:31,083 | INFO     | overall cleanup function is called
[2026-01-10 20:25:19] 2026-01-11 01:24:32,095 | INFO     | --- collectZombieJob: --- 10, [3865996]
[2026-01-10 20:25:19] 2026-01-11 01:24:32,095 | INFO     | zombie collector waiting for pid 3865996
[2026-01-10 20:25:19] 2026-01-11 01:24:32,095 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 20:25:19] 2026-01-11 01:24:32,095 | INFO     | collected zombie processes
[2026-01-10 20:25:19] 2026-01-11 01:24:32,095 | INFO     | will attempt to kill all subprocesses of pid=3865996
[2026-01-10 20:25:19] 2026-01-11 01:24:33,320 | INFO     | process IDs to be killed: [3865996] (in reverse order)
[2026-01-10 20:25:19] 2026-01-11 01:24:33,560 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 20:25:19] 2026-01-11 01:24:33,560 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 20:25:19] 2026-01-11 01:24:33,598 | INFO     | did not find any defunct processes belonging to 3865996
[2026-01-10 20:25:19] 2026-01-11 01:24:33,644 | INFO     | did not find any defunct processes belonging to 3865996
[2026-01-10 20:25:19] 2026-01-11 01:24:33,649 | INFO     | ready for new job
[2026-01-10 20:25:19] 2026-01-11 01:24:33,649 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 20:25:19] 2026-01-11 01:24:33,650 | INFO     | ***************************************
[2026-01-10 20:25:19] 2026-01-11 01:24:33,650 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 20:25:19] 2026-01-11 01:24:33,651 | INFO     | ***************************************
[2026-01-10 20:25:19] 2026-01-11 01:24:33,651 | INFO     | 
[2026-01-10 20:25:19] 2026-01-11 01:24:33,659 | INFO     | architecture information:
[2026-01-10 20:25:19] 2026-01-11 01:24:33,663 | INFO     | executing command: cat /etc/os-release
[2026-01-10 20:25:19] 2026-01-11 01:24:33,702 | INFO     | cat /etc/os-release:
[2026-01-10 20:25:19] NAME="CentOS Linux"
[2026-01-10 20:25:19] VERSION="7 (Core)"
[2026-01-10 20:25:19] ID="centos"
[2026-01-10 20:25:19] ID_LIKE="rhel fedora"
[2026-01-10 20:25:19] VERSION_ID="7"
[2026-01-10 20:25:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 20:25:19] ANSI_COLOR="0;31"
[2026-01-10 20:25:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 20:25:19] HOME_URL="https://www.centos.org/"
[2026-01-10 20:25:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 20:25:19] 
[2026-01-10 20:25:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 20:25:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 20:25:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 20:25:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 20:25:19] 
[2026-01-10 20:25:19] 2026-01-11 01:24:33,702 | INFO     | ***************************************
[2026-01-10 20:25:19] 2026-01-11 01:24:34,206 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-10 20:25:19] 2026-01-11 01:24:34,279 | INFO     | sufficient remaining disk space (168165376000 B)
[2026-01-10 20:25:19] 2026-01-11 01:24:34,280 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 20:25:19] 2026-01-11 01:24:34,280 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 20:25:19] 2026-01-11 01:24:34,280 | INFO     | update_server=False
[2026-01-10 20:25:19] 2026-01-11 01:24:34,280 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 20:25:19] 2026-01-11 01:24:34,280 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 20:25:19] 2026-01-11 01:24:34,445 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 20:25:19] 2026-01-11 01:24:34,883 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:25:19] 2026-01-11 01:24:34,883 | INFO     | aborting loop
[2026-01-10 20:25:19] 2026-01-11 01:24:35,153 | INFO     | all payload control threads have been joined
[2026-01-10 20:25:19] 2026-01-11 01:24:35,194 | INFO     | all job control threads have been joined
[2026-01-10 20:25:19] 2026-01-11 01:24:35,212 | INFO     | all data control threads have been joined
[2026-01-10 20:25:19] 2026-01-11 01:24:35,286 | INFO     | [job] retrieve thread has finished
[2026-01-10 20:25:19] 2026-01-11 01:24:35,470 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:25:19] 2026-01-11 01:24:35,606 | INFO     | [payload] validate_post thread has finished
[2026-01-10 20:25:19] 2026-01-11 01:24:35,889 | INFO     | [job] job monitor thread has finished
[2026-01-10 20:25:19] 2026-01-11 01:24:35,919 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 20:25:19] 2026-01-11 01:24:35,961 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 20:25:19] 2026-01-11 01:24:36,104 | INFO     | [payload] failed_post thread has finished
[2026-01-10 20:25:19] 2026-01-11 01:24:36,159 | INFO     | [payload] control thread has finished
[2026-01-10 20:25:19] 2026-01-11 01:24:36,200 | INFO     | [job] control thread has finished
[2026-01-10 20:25:19] 2026-01-11 01:24:36,218 | INFO     | [data] control thread has finished
[2026-01-10 20:25:19] 2026-01-11 01:24:36,295 | INFO     | [job] validate thread has finished
[2026-01-10 20:25:19] 2026-01-11 01:24:36,302 | INFO     | [data] copytool_out thread has finished
[2026-01-10 20:25:19] 2026-01-11 01:24:36,319 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 20:25:19] 2026-01-11 01:24:36,475 | INFO     | [job] queue monitor thread has finished
[2026-01-10 20:25:19] 2026-01-11 01:24:36,707 | INFO     | [data] copytool_in thread has finished
[2026-01-10 20:25:19] 2026-01-11 01:24:38,469 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 20:25:19] 2026-01-11 01:24:44,488 | INFO     | job.realtimelogging is not enabled
[2026-01-10 20:25:19] 2026-01-11 01:24:45,494 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 20:25:19] 2026-01-11 01:25:03,950 | INFO     | PID=3851977 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 20:25:19] 2026-01-11 01:25:03,950 | INFO     | .. there are 40 such processes running
[2026-01-10 20:25:19] 2026-01-11 01:25:03,951 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 20:25:19] 2026-01-11 01:25:03,951 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 20:25:19] 2026-01-11 01:25:03,951 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 20:25:19] 2026-01-11 01:25:11,663 | INFO     | [monitor] cgroup control has ended
[2026-01-10 20:25:19] 2026-01-11 01:25:12,142 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140398847682368)>', '<ExcThread(monitor, started 140398504695552)>']
[2026-01-10 20:25:19] 2026-01-11 01:25:13,006 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 20:25:19] 2026-01-11 01:25:13,006 | INFO     | [monitor] control thread has ended
[2026-01-10 20:25:19] 2026-01-11 01:25:17,168 | INFO     | all workflow threads have been joined
[2026-01-10 20:25:19] 2026-01-11 01:25:17,168 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 20:25:19] 2026-01-11 01:25:17,168 | INFO     | traces error code: 0
[2026-01-10 20:25:19] 2026-01-11 01:25:17,168 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 20:25:19] 2026-01-11 01:25:17,714 [wrapper] ==== pilot stdout END ====
[2026-01-10 20:25:19] 2026-01-11 01:25:17,775 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 20:25:19] 2026-01-11 01:25:17,812 [wrapper] pilotpid: 3851977
[2026-01-10 20:25:19] 2026-01-11 01:25:17,854 [wrapper] Pilot exit status: 0
[2026-01-10 20:25:19] 2026-01-11 01:25:18,028 [wrapper] pandaids: 6965803006
[2026-01-10 20:25:19] 2026-01-11 01:25:18,604 [wrapper] cleanup supervisor_pilot  632408 3851978
[2026-01-10 20:25:19] 2026-01-11 01:25:18,670 [wrapper] Test setup, not cleaning
[2026-01-10 20:25:19] 2026-01-11 01:25:18,717 [wrapper] apfmon messages muted
[2026-01-10 20:25:19] 2026-01-11 01:25:18,755 [wrapper] ==== wrapper stdout END ====
[2026-01-10 20:25:19] 2026-01-11 01:25:18,788 [wrapper] ==== wrapper stderr END ====
[2026-01-10 20:25:19]  *** Error codes and diagnostics ***
[2026-01-10 20:25:19]     "exeErrorCode": 0,
[2026-01-10 20:25:19]     "exeErrorDiag": "",
[2026-01-10 20:25:19]     "pilotErrorCode": 0,
[2026-01-10 20:25:19]     "pilotErrorDiag": "",
[2026-01-10 20:25:19]  *** Listing of results directory ***
[2026-01-10 20:25:19] total 433952
[2026-01-10 20:25:19] -rwx------. 1 boincer umatlas     36322 Jan 10 18:00 runpilot2-wrapper.sh
[2026-01-10 20:25:19] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:00 queuedata.json
[2026-01-10 20:25:19] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 20:25:19] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 20:25:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:01 run_atlas
[2026-01-10 20:25:19] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:01 job.xml
[2026-01-10 20:25:19] -rw-r--r--. 2 boincer umatlas 222404950 Jan 10 18:01 EVNT.47898824._000472.pool.root.1
[2026-01-10 20:25:19] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:01 start_atlas.sh
[2026-01-10 20:25:19] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:01 shared
[2026-01-10 20:25:19] -rw-r--r--. 2 boincer umatlas    592390 Jan 10 18:01 input.tar.gz
[2026-01-10 20:25:19] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:01 boinc_lockfile
[2026-01-10 20:25:19] -rw-r--r--. 1 boincer umatlas      2518 Jan 10 18:01 pandaJob.out
[2026-01-10 20:25:19] -rw-------. 1 boincer umatlas        57 Jan 10 18:01 setup.sh.local
[2026-01-10 20:25:19] -rw-------. 1 boincer umatlas    989548 Jan 10 18:01 agis_schedconf.cvmfs.json
[2026-01-10 20:25:19] -rw-------. 1 boincer umatlas   1516240 Jan 10 18:01 agis_ddmendpoints.agis.ALL.json
[2026-01-10 20:25:19] drwx------. 5 boincer umatlas      4096 Jan 10 18:01 pilot3
[2026-01-10 20:25:19] -rw-r--r--. 1 boincer umatlas      7173 Jan 10 20:21 init_data.xml
[2026-01-10 20:25:19] -rw-------. 1 boincer umatlas 215069017 Jan 10 20:23 HITS.47898826._040613.pool.root.1
[2026-01-10 20:25:19] -rw-r--r--. 1 boincer umatlas       529 Jan 10 20:23 boinc_task_state.xml
[2026-01-10 20:25:19] -rw-------. 1 boincer umatlas      1034 Jan 10 20:23 memory_monitor_summary.json
[2026-01-10 20:25:19] -rw-------. 1 boincer umatlas    373042 Jan 10 20:24 log.47898826._040613.job.log.tgz.1
[2026-01-10 20:25:19] -rw-------. 1 boincer umatlas        95 Jan 10 20:24 pilot_heartbeat.json
[2026-01-10 20:25:19] -rw-------. 1 boincer umatlas      7769 Jan 10 20:24 heartbeat.json
[2026-01-10 20:25:19] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 20:25 boinc_mmap_file
[2026-01-10 20:25:19] -rw-r--r--. 1 boincer umatlas        27 Jan 10 20:25 wrapper_checkpoint.txt
[2026-01-10 20:25:19] -rw-------. 1 boincer umatlas      4897 Jan 10 20:25 pilotlog.txt
[2026-01-10 20:25:19] -rw-------. 1 boincer umatlas   1112766 Jan 10 20:25 log.47898826._040613.job.log.1
[2026-01-10 20:25:19] -rw-------. 1 boincer umatlas       357 Jan 10 20:25 output.list
[2026-01-10 20:25:19] -rw-r--r--. 1 boincer umatlas       620 Jan 10 20:25 runtime_log
[2026-01-10 20:25:19] -rw-------. 1 boincer umatlas   1505280 Jan 10 20:25 result.tar.gz
[2026-01-10 20:25:19] -rw-r--r--. 1 boincer umatlas      9337 Jan 10 20:25 runtime_log.err
[2026-01-10 20:25:19] -rw-------. 1 boincer umatlas       653 Jan 10 20:25 HaYNDmw7wy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpumKDmGxsULm.diag
[2026-01-10 20:25:19] -rw-r--r--. 1 boincer umatlas     21250 Jan 10 20:25 stderr.txt
[2026-01-10 20:25:19] HITS file was successfully produced:
[2026-01-10 20:25:19] -rw-------. 1 boincer umatlas 215069017 Jan 10 20:23 shared/HITS.pool.root.1
[2026-01-10 20:25:19]  *** Contents of shared directory: ***
[2026-01-10 20:25:19] total 429300
[2026-01-10 20:25:19] -rw-r--r--. 2 boincer umatlas 222404950 Jan 10 18:01 ATLAS.root_0
[2026-01-10 20:25:19] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:01 start_atlas.sh
[2026-01-10 20:25:19] -rw-r--r--. 2 boincer umatlas    592390 Jan 10 18:01 input.tar.gz
[2026-01-10 20:25:19] -rw-------. 1 boincer umatlas 215069017 Jan 10 20:23 HITS.pool.root.1
[2026-01-10 20:25:19] -rw-------. 1 boincer umatlas   1505280 Jan 10 20:25 result.tar.gz
20:25:20 (3844610): run_atlas exited; CPU time 31749.283358
20:25:20 (3844610): called boinc_finish(0)

</stderr_txt>
]]>

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