Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:01:38 (2372148): wrapper (7.7.26015): starting
18:01:38 (2372148): wrapper: running run_atlas (--nthreads 11)
[2026-01-10 18:01:38] Arguments: --nthreads 11
[2026-01-10 18:01:38] Threads: 11
[2026-01-10 18:01:38] Checking for CVMFS
[2026-01-10 18:01:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:01:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:01:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:01:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:01:39] 2.13.3.0 11754 95438 212468 154994 2 353 20867169 32935936 26895 16776704 0 496454340 99.517 649823458 17866 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 18:01:39] CVMFS is ok
[2026-01-10 18:01:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:01:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:01:39] Further information can be found at the LHC@home message board.
[2026-01-10 18:01:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:01:39] Checking for apptainer binary...
[2026-01-10 18:01:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:01:39] Running /usr/bin/apptainer --version
[2026-01-10 18:01:39] apptainer version 1.4.5-2.el9
[2026-01-10 18:01:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:01:39] c7-2-38.aglt2.org
[2026-01-10 18:01:39] apptainer works
[2026-01-10 18:01:39] Set ATHENA_PROC_NUMBER=11
[2026-01-10 18:01:39] Set ATHENA_CORE_NUMBER=11
[2026-01-10 18:01:39] Starting ATLAS job with PandaID=6965803001
[2026-01-10 18:01:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 23:31:29]  *** The last 200 lines of the pilot log: ***
[2026-01-10 23:31:29] 2026-01-11 04:30:28,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 23:31:29] 2026-01-11 04:30:29,410 | INFO     | time since job start (19719s) is within the limit (349056.0s)
[2026-01-10 23:31:29] 2026-01-11 04:30:31,375 | INFO     | monitor loop #1386: job 0:6965803001 is in state 'finished'
[2026-01-10 23:31:29] 2026-01-11 04:30:31,375 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 23:31:29] 2026-01-11 04:30:31,415 | INFO     | time since job start (19721s) is within the limit (349056.0s)
[2026-01-10 23:31:29] 2026-01-11 04:30:31,497 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 23:31:29] 2026-01-11 04:30:31,508 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3378.748177083333
[2026-01-10 23:31:29] 2026-01-11 04:30:31,520 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965803001/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 23:31:29] 2026-01-11 04:30:31,520 | INFO     | extracted standard info from prmon json
[2026-01-10 23:31:29] 2026-01-11 04:30:31,520 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 23:31:29] 2026-01-11 04:30:31,521 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 23:31:29] 2026-01-11 04:30:31,521 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 23:31:29] 2026-01-11 04:30:31,521 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 23:31:29] 2026-01-11 04:30:31,525 | INFO     | fitting pss+swap vs Time
[2026-01-10 23:31:29] 2026-01-11 04:30:31,526 | INFO     | sum of square deviations: 10449170802.0
[2026-01-10 23:31:29] 2026-01-11 04:30:31,528 | INFO     | sum of deviations: 157335535635.99997
[2026-01-10 23:31:29] 2026-01-11 04:30:31,528 | INFO     | mean x: 1768095961.0
[2026-01-10 23:31:29] 2026-01-11 04:30:31,528 | INFO     | mean y: 2626578.052631579
[2026-01-10 23:31:29] 2026-01-11 04:30:31,528 | INFO     | intersect: -26619995479.818016
[2026-01-10 23:31:29] 2026-01-11 04:30:31,528 | INFO     | chi2: 2.240228034566794
[2026-01-10 23:31:29] 2026-01-11 04:30:31,529 | INFO     | sum of square deviations: 9971385099.5
[2026-01-10 23:31:29] 2026-01-11 04:30:31,531 | INFO     | sum of deviations: 154548268766.50003
[2026-01-10 23:31:29] 2026-01-11 04:30:31,531 | INFO     | mean x: 1768095808.5
[2026-01-10 23:31:29] 2026-01-11 04:30:31,531 | INFO     | mean y: 2625688.3427672954
[2026-01-10 23:31:29] 2026-01-11 04:30:31,531 | INFO     | intersect: -27401405295.344967
[2026-01-10 23:31:29] 2026-01-11 04:30:31,531 | INFO     | chi2: 2.237769135281181
[2026-01-10 23:31:29] 2026-01-11 04:30:31,531 | INFO     | current chi2=2.237769135281181 (change=0.10976111572893643 %)
[2026-01-10 23:31:29] 2026-01-11 04:30:31,531 | INFO     | right removable region: 317
[2026-01-10 23:31:29] 2026-01-11 04:30:31,532 | INFO     | sum of square deviations: 9971385099.5
[2026-01-10 23:31:29] 2026-01-11 04:30:31,533 | INFO     | sum of deviations: 93608166282.99988
[2026-01-10 23:31:29] 2026-01-11 04:30:31,533 | INFO     | mean x: 1768096113.5
[2026-01-10 23:31:29] 2026-01-11 04:30:31,533 | INFO     | mean y: 2646822.4025157234
[2026-01-10 23:31:29] 2026-01-11 04:30:31,534 | INFO     | intersect: -16595672603.163847
[2026-01-10 23:31:29] 2026-01-11 04:30:31,534 | INFO     | chi2: 0.6244374510478374
[2026-01-10 23:31:29] 2026-01-11 04:30:31,534 | INFO     | current chi2=0.6244374510478374 (change=72.12616566649704 %)
[2026-01-10 23:31:29] 2026-01-11 04:30:31,534 | INFO     | sum of square deviations: 9508390372.0
[2026-01-10 23:31:29] 2026-01-11 04:30:31,536 | INFO     | sum of deviations: 74397210339.00002
[2026-01-10 23:31:29] 2026-01-11 04:30:31,536 | INFO     | mean x: 1768096266.0
[2026-01-10 23:31:29] 2026-01-11 04:30:31,536 | INFO     | mean y: 2653137.5079872203
[2026-01-10 23:31:29] 2026-01-11 04:30:31,536 | INFO     | intersect: -13831594790.360167
[2026-01-10 23:31:29] 2026-01-11 04:30:31,536 | INFO     | chi2: 0.5353234520654901
[2026-01-10 23:31:29] 2026-01-11 04:30:31,537 | INFO     | current chi2=0.5353234520654901 (change=14.271084931374553 %)
[2026-01-10 23:31:29] 2026-01-11 04:30:31,537 | INFO     | left removable region: 20
[2026-01-10 23:31:29] 2026-01-11 04:30:31,537 | INFO     | sum of square deviations: 8123493708.0
[2026-01-10 23:31:29] 2026-01-11 04:30:31,539 | INFO     | sum of deviations: 23343738151.999996
[2026-01-10 23:31:29] 2026-01-11 04:30:31,539 | INFO     | mean x: 1768096388.0
[2026-01-10 23:31:29] 2026-01-11 04:30:31,539 | INFO     | mean y: 2670289.6835016836
[2026-01-10 23:31:29] 2026-01-11 04:30:31,539 | INFO     | intersect: -5078145993.626039
[2026-01-10 23:31:29] 2026-01-11 04:30:31,539 | INFO     | chi2: 0.17514068191707785
[2026-01-10 23:31:29] 2026-01-11 04:30:31,539 | INFO     | current memory leak: 2.87 B/s (using 297 data points, chi2=0.18)
[2026-01-10 23:31:29] 2026-01-11 04:30:31,540 | INFO     | could have reported an average CPU frequency of 3295 MHz (14 samples)
[2026-01-10 23:31:29] 2026-01-11 04:30:31,540 | INFO     | ..............................
[2026-01-10 23:31:29] 2026-01-11 04:30:31,540 | INFO     | . Timing measurements:
[2026-01-10 23:31:29] 2026-01-11 04:30:31,540 | INFO     | . get job = 0 s
[2026-01-10 23:31:29] 2026-01-11 04:30:31,540 | INFO     | . initial setup = 2 s
[2026-01-10 23:31:29] 2026-01-11 04:30:31,540 | INFO     | . payload setup = 6 s
[2026-01-10 23:31:29] 2026-01-11 04:30:31,540 | INFO     | . stage-in = 0 s
[2026-01-10 23:31:29] 2026-01-11 04:30:31,540 | INFO     | . payload execution = 19683 s
[2026-01-10 23:31:29] 2026-01-11 04:30:31,540 | INFO     | . stage-out = 2 s
[2026-01-10 23:31:29] 2026-01-11 04:30:31,540 | INFO     | . log creation = 0 s
[2026-01-10 23:31:29] 2026-01-11 04:30:31,540 | INFO     | ..............................
[2026-01-10 23:31:29] 2026-01-11 04:30:31,607 | INFO     | 
[2026-01-10 23:31:29] 2026-01-11 04:30:31,607 | INFO     | job summary report
[2026-01-10 23:31:29] 2026-01-11 04:30:31,607 | INFO     | --------------------------------------------------
[2026-01-10 23:31:29] 2026-01-11 04:30:31,607 | INFO     | PanDA job id: 6965803001
[2026-01-10 23:31:29] 2026-01-11 04:30:31,607 | INFO     | task id: 47898826
[2026-01-10 23:31:29] 2026-01-11 04:30:31,607 | INFO     | errors: (none)
[2026-01-10 23:31:29] 2026-01-11 04:30:31,608 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 23:31:29] 2026-01-11 04:30:31,608 | INFO     | pilot state: finished 
[2026-01-10 23:31:29] 2026-01-11 04:30:31,608 | INFO     | transexitcode: 0
[2026-01-10 23:31:29] 2026-01-11 04:30:31,608 | INFO     | exeerrorcode: 0
[2026-01-10 23:31:29] 2026-01-11 04:30:31,608 | INFO     | exeerrordiag: 
[2026-01-10 23:31:29] 2026-01-11 04:30:31,608 | INFO     | exitcode: 0
[2026-01-10 23:31:29] 2026-01-11 04:30:31,608 | INFO     | exitmsg: OK
[2026-01-10 23:31:29] 2026-01-11 04:30:31,608 | INFO     | cpuconsumptiontime: 44530 s
[2026-01-10 23:31:29] 2026-01-11 04:30:31,608 | INFO     | nevents: 400
[2026-01-10 23:31:29] 2026-01-11 04:30:31,608 | INFO     | neventsw: 0
[2026-01-10 23:31:29] 2026-01-11 04:30:31,608 | INFO     | pid: 2393824
[2026-01-10 23:31:29] 2026-01-11 04:30:31,608 | INFO     | pgrp: 2393824
[2026-01-10 23:31:29] 2026-01-11 04:30:31,608 | INFO     | corecount: 11
[2026-01-10 23:31:29] 2026-01-11 04:30:31,608 | INFO     | event service: False
[2026-01-10 23:31:29] 2026-01-11 04:30:31,608 | INFO     | sizes: {0: 2283914, 5: 2284176, 11: 2284232, 19693: 2317484, 19694: 2317483, 19696: 2326537, 19698: 2326721, 19705: 2326915}
[2026-01-10 23:31:29] 2026-01-11 04:30:31,608 | INFO     | --------------------------------------------------
[2026-01-10 23:31:29] 2026-01-11 04:30:31,608 | INFO     | 
[2026-01-10 23:31:29] 2026-01-11 04:30:31,608 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 23:31:29] 2026-01-11 04:30:31,624 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 23:31:29] 2026-01-11 04:30:31,624 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 23:31:29] 2026-01-11 04:30:31,624 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 23:31:29] 2026-01-11 04:30:31,624 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 23:31:29] 2026-01-11 04:30:31,624 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 23:31:29] 2026-01-11 04:30:31,625 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 23:31:29] 2026-01-11 04:30:31,625 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 23:31:29] 2026-01-11 04:30:31,625 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 23:31:29] 2026-01-11 04:30:31,625 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 23:31:29] 2026-01-11 04:30:31,625 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 23:31:29] 2026-01-11 04:30:31,625 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 23:31:29] 2026-01-11 04:30:31,625 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 23:31:29] 2026-01-11 04:30:31,625 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 23:31:29] 2026-01-11 04:30:31,625 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 23:31:29] 2026-01-11 04:30:31,625 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 23:31:29] 2026-01-11 04:30:31,625 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 23:31:29] 2026-01-11 04:30:31,625 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 23:31:29] 2026-01-11 04:30:31,625 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 23:31:29] 2026-01-11 04:30:31,625 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 23:31:29] 2026-01-11 04:30:31,625 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 23:31:29] 2026-01-11 04:30:31,625 | INFO     | job 6965803001 has completed (purged errors)
[2026-01-10 23:31:29] 2026-01-11 04:30:31,625 | INFO     | overall cleanup function is called
[2026-01-10 23:31:29] 2026-01-11 04:30:32,633 | INFO     | --- collectZombieJob: --- 10, [2393824]
[2026-01-10 23:31:29] 2026-01-11 04:30:32,633 | INFO     | zombie collector waiting for pid 2393824
[2026-01-10 23:31:29] 2026-01-11 04:30:32,633 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 23:31:29] 2026-01-11 04:30:32,634 | INFO     | collected zombie processes
[2026-01-10 23:31:29] 2026-01-11 04:30:32,634 | INFO     | will attempt to kill all subprocesses of pid=2393824
[2026-01-10 23:31:29] 2026-01-11 04:30:33,013 | INFO     | process IDs to be killed: [2393824] (in reverse order)
[2026-01-10 23:31:29] 2026-01-11 04:30:33,128 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 23:31:29] 2026-01-11 04:30:33,129 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 23:31:29] 2026-01-11 04:30:33,147 | INFO     | did not find any defunct processes belonging to 2393824
[2026-01-10 23:31:29] 2026-01-11 04:30:33,165 | INFO     | did not find any defunct processes belonging to 2393824
[2026-01-10 23:31:29] 2026-01-11 04:30:33,166 | INFO     | ready for new job
[2026-01-10 23:31:29] 2026-01-11 04:30:33,166 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 23:31:29] 2026-01-11 04:30:33,168 | INFO     | ***************************************
[2026-01-10 23:31:29] 2026-01-11 04:30:33,168 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 23:31:29] 2026-01-11 04:30:33,168 | INFO     | ***************************************
[2026-01-10 23:31:29] 2026-01-11 04:30:33,168 | INFO     | 
[2026-01-10 23:31:29] 2026-01-11 04:30:33,173 | INFO     | architecture information:
[2026-01-10 23:31:29] 2026-01-11 04:30:33,173 | INFO     | executing command: cat /etc/os-release
[2026-01-10 23:31:29] 2026-01-11 04:30:33,187 | INFO     | cat /etc/os-release:
[2026-01-10 23:31:29] NAME="CentOS Linux"
[2026-01-10 23:31:29] VERSION="7 (Core)"
[2026-01-10 23:31:29] ID="centos"
[2026-01-10 23:31:29] ID_LIKE="rhel fedora"
[2026-01-10 23:31:29] VERSION_ID="7"
[2026-01-10 23:31:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 23:31:29] ANSI_COLOR="0;31"
[2026-01-10 23:31:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 23:31:29] HOME_URL="https://www.centos.org/"
[2026-01-10 23:31:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 23:31:29] 
[2026-01-10 23:31:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 23:31:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 23:31:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 23:31:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 23:31:29] 
[2026-01-10 23:31:29] 2026-01-11 04:30:33,187 | INFO     | ***************************************
[2026-01-10 23:31:29] 2026-01-11 04:30:33,690 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 23:31:29] 2026-01-11 04:30:33,705 | INFO     | sufficient remaining disk space (74961649664 B)
[2026-01-10 23:31:29] 2026-01-11 04:30:33,705 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 23:31:29] 2026-01-11 04:30:33,705 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 23:31:29] 2026-01-11 04:30:33,706 | INFO     | update_server=False
[2026-01-10 23:31:29] 2026-01-11 04:30:33,706 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 23:31:29] 2026-01-11 04:30:33,706 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 23:31:29] 2026-01-11 04:30:33,892 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 23:31:29] 2026-01-11 04:30:33,892 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 23:31:29] 2026-01-11 04:30:33,893 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 23:31:29] 2026-01-11 04:30:33,893 | INFO     | will abort loop
[2026-01-10 23:31:29] 2026-01-11 04:30:34,040 | INFO     | all job control threads have been joined
[2026-01-10 23:31:29] 2026-01-11 04:30:34,071 | INFO     | all data control threads have been joined
[2026-01-10 23:31:29] 2026-01-11 04:30:34,623 | INFO     | all payload control threads have been joined
[2026-01-10 23:31:29] 2026-01-11 04:30:34,710 | INFO     | [job] retrieve thread has finished
[2026-01-10 23:31:29] 2026-01-11 04:30:34,755 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 23:31:29] 2026-01-11 04:30:34,897 | INFO     | [job] job monitor thread has finished
[2026-01-10 23:31:29] 2026-01-11 04:30:34,925 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 23:31:29] 2026-01-11 04:30:35,045 | INFO     | [job] control thread has finished
[2026-01-10 23:31:29] 2026-01-11 04:30:35,077 | INFO     | [data] control thread has finished
[2026-01-10 23:31:29] 2026-01-11 04:30:35,096 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 23:31:29] 2026-01-11 04:30:35,465 | INFO     | [data] copytool_in thread has finished
[2026-01-10 23:31:29] 2026-01-11 04:30:35,631 | INFO     | [payload] control thread has finished
[2026-01-10 23:31:29] 2026-01-11 04:30:35,711 | INFO     | [data] copytool_out thread has finished
[2026-01-10 23:31:29] 2026-01-11 04:30:35,806 | INFO     | [job] validate thread has finished
[2026-01-10 23:31:29] 2026-01-11 04:30:35,916 | INFO     | [payload] failed_post thread has finished
[2026-01-10 23:31:29] 2026-01-11 04:30:36,008 | INFO     | [payload] validate_post thread has finished
[2026-01-10 23:31:29] 2026-01-11 04:30:36,210 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 23:31:29] 2026-01-11 04:30:36,617 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 23:31:29] 2026-01-11 04:30:37,622 | INFO     | [job] queue monitor thread has finished
[2026-01-10 23:31:29] 2026-01-11 04:30:39,108 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 23:31:29] 2026-01-11 04:30:43,920 | INFO     | job.realtimelogging is not enabled
[2026-01-10 23:31:29] 2026-01-11 04:30:44,925 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 23:31:29] 2026-01-11 04:31:03,511 | INFO     | 19725s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-10 23:31:29] 2026-01-11 04:31:05,087 | INFO     | PID=2379352 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 23:31:29] 2026-01-11 04:31:05,087 | INFO     | .. there are 27 such processes running
[2026-01-10 23:31:29] 2026-01-11 04:31:05,087 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 23:31:29] 2026-01-11 04:31:05,087 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 23:31:29] 2026-01-11 04:31:05,088 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 23:31:29] 2026-01-11 04:31:23,415 | INFO     | [monitor] cgroup control has ended
[2026-01-10 23:31:29] 2026-01-11 04:31:24,265 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140512865777472)>', '<ExcThread(monitor, started 140512363259648)>']
[2026-01-10 23:31:29] 2026-01-11 04:31:25,195 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 23:31:29] 2026-01-11 04:31:25,195 | INFO     | [monitor] control thread has ended
[2026-01-10 23:31:29] 2026-01-11 04:31:29,291 | INFO     | all workflow threads have been joined
[2026-01-10 23:31:29] 2026-01-11 04:31:29,291 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 23:31:29] 2026-01-11 04:31:29,292 | INFO     | traces error code: 0
[2026-01-10 23:31:29] 2026-01-11 04:31:29,292 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 23:31:29] 2026-01-11 04:31:29,406 [wrapper] ==== pilot stdout END ====
[2026-01-10 23:31:29] 2026-01-11 04:31:29,409 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 23:31:29] 2026-01-11 04:31:29,410 [wrapper] pilotpid: 2379352
[2026-01-10 23:31:29] 2026-01-11 04:31:29,413 [wrapper] Pilot exit status: 0
[2026-01-10 23:31:29] 2026-01-11 04:31:29,422 [wrapper] pandaids: 6965803001
[2026-01-10 23:31:29] 2026-01-11 04:31:29,506 [wrapper] cleanup supervisor_pilot 3825540 2379353
[2026-01-10 23:31:29] 2026-01-11 04:31:29,509 [wrapper] Test setup, not cleaning
[2026-01-10 23:31:29] 2026-01-11 04:31:29,511 [wrapper] apfmon messages muted
[2026-01-10 23:31:29] 2026-01-11 04:31:29,514 [wrapper] ==== wrapper stdout END ====
[2026-01-10 23:31:29] 2026-01-11 04:31:29,517 [wrapper] ==== wrapper stderr END ====
[2026-01-10 23:31:29]  *** Error codes and diagnostics ***
[2026-01-10 23:31:29]     "exeErrorCode": 0,
[2026-01-10 23:31:29]     "exeErrorDiag": "",
[2026-01-10 23:31:29]     "pilotErrorCode": 0,
[2026-01-10 23:31:29]     "pilotErrorDiag": "",
[2026-01-10 23:31:29]  *** Listing of results directory ***
[2026-01-10 23:31:29] total 443160
[2026-01-10 23:31:29] -rwx------. 1 boincer umatlas     36322 Jan 10 18:00 runpilot2-wrapper.sh
[2026-01-10 23:31:29] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:00 queuedata.json
[2026-01-10 23:31:29] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 23:31:29] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 23:31:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:01 run_atlas
[2026-01-10 23:31:29] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:01 job.xml
[2026-01-10 23:31:29] -rw-r--r--. 2 boincer umatlas 223127938 Jan 10 18:01 EVNT.47898824._000365.pool.root.1
[2026-01-10 23:31:29] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:01 shared
[2026-01-10 23:31:29] -rw-r--r--. 2 boincer umatlas    592397 Jan 10 18:01 input.tar.gz
[2026-01-10 23:31:29] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:01 start_atlas.sh
[2026-01-10 23:31:29] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:01 boinc_lockfile
[2026-01-10 23:31:29] -rw-r--r--. 1 boincer umatlas      2516 Jan 10 18:01 pandaJob.out
[2026-01-10 23:31:29] -rw-------. 1 boincer umatlas        57 Jan 10 18:01 setup.sh.local
[2026-01-10 23:31:29] -rw-------. 1 boincer umatlas    989548 Jan 10 18:01 agis_schedconf.cvmfs.json
[2026-01-10 23:31:29] drwx------. 5 boincer umatlas      4096 Jan 10 18:01 pilot3
[2026-01-10 23:31:29] -rw-r--r--. 1 boincer umatlas      6944 Jan 10 23:28 init_data.xml
[2026-01-10 23:31:29] -rw-------. 1 boincer umatlas 220154957 Jan 10 23:29 HITS.47898826._040608.pool.root.1
[2026-01-10 23:31:29] -rw-r--r--. 1 boincer umatlas       530 Jan 10 23:29 boinc_task_state.xml
[2026-01-10 23:31:29] -rw-------. 1 boincer umatlas      1035 Jan 10 23:30 memory_monitor_summary.json
[2026-01-10 23:31:29] -rw-------. 1 boincer umatlas   1516240 Jan 10 23:30 agis_ddmendpoints.agis.ALL.json
[2026-01-10 23:31:29] -rw-------. 1 boincer umatlas    599260 Jan 10 23:30 log.47898826._040608.job.log.tgz.1
[2026-01-10 23:31:29] -rw-------. 1 boincer umatlas        95 Jan 10 23:30 pilot_heartbeat.json
[2026-01-10 23:31:29] -rw-------. 1 boincer umatlas      7777 Jan 10 23:30 heartbeat.json
[2026-01-10 23:31:29] -rw-r--r--. 1 boincer umatlas        28 Jan 10 23:31 wrapper_checkpoint.txt
[2026-01-10 23:31:29] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 23:31 boinc_mmap_file
[2026-01-10 23:31:29] -rw-------. 1 boincer umatlas      5198 Jan 10 23:31 pilotlog.txt
[2026-01-10 23:31:29] -rw-------. 1 boincer umatlas   2701879 Jan 10 23:31 log.47898826._040608.job.log.1
[2026-01-10 23:31:29] -rw-------. 1 boincer umatlas       357 Jan 10 23:31 output.list
[2026-01-10 23:31:29] -rw-r--r--. 1 boincer umatlas       620 Jan 10 23:31 runtime_log
[2026-01-10 23:31:29] -rw-------. 1 boincer umatlas   3317760 Jan 10 23:31 result.tar.gz
[2026-01-10 23:31:29] -rw-r--r--. 1 boincer umatlas      9340 Jan 10 23:31 runtime_log.err
[2026-01-10 23:31:29] -rw-------. 1 boincer umatlas       656 Jan 10 23:31 MfRNDmw7wy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkumKDmU0GxRm.diag
[2026-01-10 23:31:29] -rw-r--r--. 1 boincer umatlas     17277 Jan 10 23:31 stderr.txt
[2026-01-10 23:31:29] HITS file was successfully produced:
[2026-01-10 23:31:29] -rw-------. 1 boincer umatlas 220154957 Jan 10 23:29 shared/HITS.pool.root.1
[2026-01-10 23:31:29]  *** Contents of shared directory: ***
[2026-01-10 23:31:29] total 436740
[2026-01-10 23:31:29] -rw-r--r--. 2 boincer umatlas 223127938 Jan 10 18:01 ATLAS.root_0
[2026-01-10 23:31:29] -rw-r--r--. 2 boincer umatlas    592397 Jan 10 18:01 input.tar.gz
[2026-01-10 23:31:29] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:01 start_atlas.sh
[2026-01-10 23:31:29] -rw-------. 1 boincer umatlas 220154957 Jan 10 23:29 HITS.pool.root.1
[2026-01-10 23:31:29] -rw-------. 1 boincer umatlas   3317760 Jan 10 23:31 result.tar.gz
23:31:31 (2372148): run_atlas exited; CPU time 45306.938468
23:31:31 (2372148): called boinc_finish(0)

</stderr_txt>
]]>

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