Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:46:10 (1222716): wrapper (7.7.26015): starting
00:46:10 (1222716): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 00:46:10] Arguments: --nthreads 4
[2026-01-11 00:46:10] Threads: 4
[2026-01-11 00:46:10] Checking for CVMFS
[2026-01-11 00:46:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 00:46:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 00:46:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 00:46:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 00:46:10] 2.9.2.0 4123 4451 94028 154997 3 57 27436150 36864000 0 130560 0 3165414 99.989 166136 3766 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-11 00:46:10] CVMFS is ok
[2026-01-11 00:46:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 00:46:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 00:46:10] Further information can be found at the LHC@home message board.
[2026-01-11 00:46:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 00:46:10] Checking for apptainer binary...
[2026-01-11 00:46:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 00:46:10] Running /usr/bin/apptainer --version
[2026-01-11 00:46:10] apptainer version 1.4.1-1.1
[2026-01-11 00:46:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 00:46:10] atlasA237
[2026-01-11 00:46:10] apptainer works
[2026-01-11 00:46:10] Set ATHENA_PROC_NUMBER=4
[2026-01-11 00:46:10] Set ATHENA_CORE_NUMBER=4
[2026-01-11 00:46:10] Starting ATLAS job with PandaID=6964539111
[2026-01-11 00:46:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 02:22:30]  *** The last 200 lines of the pilot log: ***
[2026-01-11 02:22:30] 2026-01-11 01:22:03,962 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 02:22:30] 2026-01-11 01:22:03,964 | INFO     | did not find any defunct processes belonging to 1233116
[2026-01-11 02:22:30] 2026-01-11 01:22:03,965 | INFO     | did not find any defunct processes belonging to 1233116
[2026-01-11 02:22:30] 2026-01-11 01:22:03,965 | INFO     | ready for new job
[2026-01-11 02:22:30] 2026-01-11 01:22:03,965 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 02:22:30] 2026-01-11 01:22:03,966 | INFO     | ***************************************
[2026-01-11 02:22:30] 2026-01-11 01:22:03,966 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 02:22:30] 2026-01-11 01:22:03,966 | INFO     | ***************************************
[2026-01-11 02:22:30] 2026-01-11 01:22:03,966 | INFO     | 
[2026-01-11 02:22:30] 2026-01-11 01:22:03,967 | INFO     | architecture information:
[2026-01-11 02:22:30] 2026-01-11 01:22:03,967 | INFO     | executing command: cat /etc/os-release
[2026-01-11 02:22:30] 2026-01-11 01:22:03,979 | INFO     | cat /etc/os-release:
[2026-01-11 02:22:30] NAME="CentOS Linux"
[2026-01-11 02:22:30] VERSION="7 (Core)"
[2026-01-11 02:22:30] ID="centos"
[2026-01-11 02:22:30] ID_LIKE="rhel fedora"
[2026-01-11 02:22:30] VERSION_ID="7"
[2026-01-11 02:22:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 02:22:30] ANSI_COLOR="0;31"
[2026-01-11 02:22:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 02:22:30] HOME_URL="https://www.centos.org/"
[2026-01-11 02:22:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 02:22:30] 
[2026-01-11 02:22:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 02:22:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 02:22:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 02:22:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 02:22:30] 
[2026-01-11 02:22:30] 2026-01-11 01:22:03,980 | INFO     | ***************************************
[2026-01-11 02:22:30] 2026-01-11 01:22:04,483 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-11 02:22:30] 2026-01-11 01:22:04,500 | INFO     | sufficient remaining disk space (334137131008 B)
[2026-01-11 02:22:30] 2026-01-11 01:22:04,500 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 02:22:30] 2026-01-11 01:22:04,500 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 02:22:30] 2026-01-11 01:22:04,500 | INFO     | update_server=False
[2026-01-11 02:22:30] 2026-01-11 01:22:04,500 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 02:22:30] 2026-01-11 01:22:04,500 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-11 02:22:30] 2026-01-11 01:22:04,501 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 02:22:30] 2026-01-11 01:22:04,501 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 02:22:30] 2026-01-11 01:22:04,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 02:22:30] 2026-01-11 01:22:04,501 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 02:22:30] 2026-01-11 01:22:04,501 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 02:22:30] 2026-01-11 01:22:04,562 | INFO     | all data control threads have been joined
[2026-01-11 02:22:30] 2026-01-11 01:22:05,235 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 02:22:30] 2026-01-11 01:22:05,235 | INFO     | aborting loop
[2026-01-11 02:22:30] 2026-01-11 01:22:05,294 | INFO     | all job control threads have been joined
[2026-01-11 02:22:30] 2026-01-11 01:22:05,506 | INFO     | [job] retrieve thread has finished
[2026-01-11 02:22:30] 2026-01-11 01:22:05,506 | INFO     | [job] queue monitor thread has finished
[2026-01-11 02:22:30] 2026-01-11 01:22:05,540 | INFO     | [data] copytool_in thread has finished
[2026-01-11 02:22:30] 2026-01-11 01:22:05,568 | INFO     | [data] control thread has finished
[2026-01-11 02:22:30] 2026-01-11 01:22:05,751 | INFO     | all payload control threads have been joined
[2026-01-11 02:22:30] 2026-01-11 01:22:05,820 | INFO     | [payload] failed_post thread has finished
[2026-01-11 02:22:30] 2026-01-11 01:22:06,241 | INFO     | [job] job monitor thread has finished
[2026-01-11 02:22:30] 2026-01-11 01:22:06,300 | INFO     | [job] control thread has finished
[2026-01-11 02:22:30] 2026-01-11 01:22:06,356 | INFO     | [payload] validate_post thread has finished
[2026-01-11 02:22:30] 2026-01-11 01:22:06,507 | INFO     | [data] copytool_out thread has finished
[2026-01-11 02:22:30] 2026-01-11 01:22:06,602 | INFO     | [job] validate thread has finished
[2026-01-11 02:22:30] 2026-01-11 01:22:06,728 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 02:22:30] 2026-01-11 01:22:06,757 | INFO     | [payload] control thread has finished
[2026-01-11 02:22:30] 2026-01-11 01:22:06,802 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 02:22:30] 2026-01-11 01:22:06,816 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 02:22:30] 2026-01-11 01:22:07,253 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 02:22:30] 2026-01-11 01:22:11,261 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 02:22:30] 2026-01-11 01:22:14,844 | INFO     | job.realtimelogging is not enabled
[2026-01-11 02:22:30] 2026-01-11 01:22:15,847 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 02:22:30] 2026-01-11 01:22:24,576 | INFO     | [monitor] cgroup control has ended
[2026-01-11 02:22:30] 2026-01-11 01:22:25,592 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139655334000448)>', '<ExcThread(monitor, started 139654376433408)>']
[2026-01-11 02:22:30] 2026-01-11 01:22:25,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 02:22:30] 2026-01-11 01:22:25,613 | INFO     | [monitor] control thread has ended
[2026-01-11 02:22:30] 2026-01-11 01:22:30,617 | INFO     | all workflow threads have been joined
[2026-01-11 02:22:30] 2026-01-11 01:22:30,618 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 02:22:30] 2026-01-11 01:22:30,619 | INFO     | traces error code: 0
[2026-01-11 02:22:30] 2026-01-11 01:22:30,619 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 02:22:30] 2026-01-11 01:22:30,686 [wrapper] ==== pilot stdout END ====
[2026-01-11 02:22:30] 2026-01-11 01:22:30,689 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 02:22:30] 2026-01-11 01:22:30,693 [wrapper] pilotpid: 1226522
[2026-01-11 02:22:30] 2026-01-11 01:22:30,697 [wrapper] Pilot exit status: 0
[2026-01-11 02:22:30] 2026-01-11 01:22:30,708 [wrapper] pandaids: 6964539111
[2026-01-11 02:22:30] 2026-01-11 01:22:30,729 [wrapper] cleanup supervisor_pilot 1245639 1226523
[2026-01-11 02:22:30] 2026-01-11 01:22:30,732 [wrapper] Test setup, not cleaning
[2026-01-11 02:22:30] 2026-01-11 01:22:30,736 [wrapper] apfmon messages muted
[2026-01-11 02:22:30] 2026-01-11 01:22:30,740 [wrapper] ==== wrapper stdout END ====
[2026-01-11 02:22:30] 2026-01-11 01:22:30,743 [wrapper] ==== wrapper stderr END ====
[2026-01-11 02:22:30]  *** Error codes and diagnostics ***
[2026-01-11 02:22:30]     "exeErrorCode": 0,
[2026-01-11 02:22:30]     "exeErrorDiag": "",
[2026-01-11 02:22:30]     "pilotErrorCode": 0,
[2026-01-11 02:22:30]     "pilotErrorDiag": "",
[2026-01-11 02:22:30]  *** Listing of results directory ***
[2026-01-11 02:22:30] total 444304
[2026-01-11 02:22:30] -rw-r--r-- 1 boinc boinc      5112 Jan  9 16:55 queuedata.json
[2026-01-11 02:22:30] -rw-r--r-- 1 boinc boinc    579449 Jan  9 16:55 pilot3.tar.gz
[2026-01-11 02:22:30] -rwx------ 1 boinc boinc     36322 Jan  9 16:56 runpilot2-wrapper.sh
[2026-01-11 02:22:30] -rw-r--r-- 1 boinc boinc       100 Jan 11 00:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 02:22:30] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 00:46 run_atlas
[2026-01-11 02:22:30] -rw-r--r-- 1 boinc boinc       105 Jan 11 00:46 job.xml
[2026-01-11 02:22:30] -rw-r--r-- 2 boinc boinc 225766267 Jan 11 00:46 EVNT.47898824._001033.pool.root.1
[2026-01-11 02:22:30] -rw-r--r-- 2 boinc boinc    592404 Jan 11 00:46 input.tar.gz
[2026-01-11 02:22:30] -rw-r--r-- 2 boinc boinc     15847 Jan 11 00:46 start_atlas.sh
[2026-01-11 02:22:30] drwxrwx--x 2 boinc boinc      4096 Jan 11 00:46 shared
[2026-01-11 02:22:30] -rw-r--r-- 1 boinc boinc         0 Jan 11 00:46 boinc_setup_complete
[2026-01-11 02:22:30] -rw-r--r-- 1 boinc boinc      6371 Jan 11 00:46 init_data.xml
[2026-01-11 02:22:30] -rw-r--r-- 1 boinc boinc         0 Jan 11 00:46 boinc_lockfile
[2026-01-11 02:22:30] -rw-r--r-- 1 boinc boinc      2518 Jan 11 00:46 pandaJob.out
[2026-01-11 02:22:30] -rw------- 1 boinc boinc    989548 Jan 11 00:46 agis_schedconf.cvmfs.json
[2026-01-11 02:22:30] -rw------- 1 boinc boinc   1516240 Jan 11 00:46 agis_ddmendpoints.agis.ALL.json
[2026-01-11 02:22:30] drwx------ 5 boinc boinc      4096 Jan 11 00:46 pilot3
[2026-01-11 02:22:30] -rw------- 1 boinc boinc 223042854 Jan 11 02:21 HITS.47898826._039995.pool.root.1
[2026-01-11 02:22:30] -rw-r--r-- 1 boinc boinc       529 Jan 11 02:21 boinc_task_state.xml
[2026-01-11 02:22:30] -rw------- 1 boinc boinc        95 Jan 11 02:21 pilot_heartbeat.json
[2026-01-11 02:22:30] -rw------- 1 boinc boinc      1019 Jan 11 02:21 memory_monitor_summary.json
[2026-01-11 02:22:30] -rw------- 1 boinc boinc    292723 Jan 11 02:21 log.47898826._039995.job.log.tgz.1
[2026-01-11 02:22:30] -rw------- 1 boinc boinc      7763 Jan 11 02:22 heartbeat.json
[2026-01-11 02:22:30] -rw-r--r-- 1 boinc boinc        27 Jan 11 02:22 wrapper_checkpoint.txt
[2026-01-11 02:22:30] -rw-r--r-- 1 boinc boinc      8192 Jan 11 02:22 boinc_mmap_file
[2026-01-11 02:22:30] -rw------- 1 boinc boinc      4628 Jan 11 02:22 pilotlog.txt
[2026-01-11 02:22:30] -rw------- 1 boinc boinc    835818 Jan 11 02:22 log.47898826._039995.job.log.1
[2026-01-11 02:22:30] -rw------- 1 boinc boinc       357 Jan 11 02:22 output.list
[2026-01-11 02:22:30] -rw-r--r-- 1 boinc boinc       620 Jan 11 02:22 runtime_log
[2026-01-11 02:22:30] -rw------- 1 boinc boinc   1146880 Jan 11 02:22 result.tar.gz
[2026-01-11 02:22:30] -rw-r--r-- 1 boinc boinc      8912 Jan 11 02:22 runtime_log.err
[2026-01-11 02:22:30] -rw------- 1 boinc boinc       662 Jan 11 02:22 ieJODmP1Ty8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8ShKDmELiJVm.diag
[2026-01-11 02:22:30] -rw-r--r-- 1 boinc boinc      9878 Jan 11 02:22 stderr.txt
[2026-01-11 02:22:30] HITS file was successfully produced:
[2026-01-11 02:22:30] -rw------- 1 boinc boinc 223042854 Jan 11 02:21 shared/HITS.pool.root.1
[2026-01-11 02:22:30]  *** Contents of shared directory: ***
[2026-01-11 02:22:30] total 440016
[2026-01-11 02:22:30] -rw-r--r-- 2 boinc boinc 225766267 Jan 11 00:46 ATLAS.root_0
[2026-01-11 02:22:30] -rw-r--r-- 2 boinc boinc    592404 Jan 11 00:46 input.tar.gz
[2026-01-11 02:22:30] -rw-r--r-- 2 boinc boinc     15847 Jan 11 00:46 start_atlas.sh
[2026-01-11 02:22:30] -rw------- 1 boinc boinc 223042854 Jan 11 02:21 HITS.pool.root.1
[2026-01-11 02:22:30] -rw------- 1 boinc boinc   1146880 Jan 11 02:22 result.tar.gz
02:22:32 (1222716): run_atlas exited; CPU time 21902.465104
02:22:32 (1222716): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN