Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-10 17:41:26 (6588): vboxwrapper version 26210
2026-01-10 17:41:26 (6588): BOINC client version: 8.2.8
2026-01-10 17:41:26 (6588): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2026-01-10 17:41:27 (6588): Successfully copied 'init_data.xml' to the shared directory.
2026-01-10 17:41:27 (6588): Create VM. (boinc_9901fd3cca7b837b, slot#20)
2026-01-10 17:41:30 (6588): Setting Memory Size for VM. (4800MB)
2026-01-10 17:41:30 (6588): Setting CPU Count for VM. (8)
2026-01-10 17:41:31 (6588): Setting Chipset Options for VM.
2026-01-10 17:41:31 (6588): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-10 17:41:32 (6588): Setting Boot Options for VM.
2026-01-10 17:41:33 (6588): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-10 17:41:34 (6588): Enabling VM Network Access.
2026-01-10 17:41:34 (6588): Disabling USB Support for VM.
2026-01-10 17:41:35 (6588): Disabling COM Port Support for VM.
2026-01-10 17:41:36 (6588): Disabling LPT Port Support for VM.
2026-01-10 17:41:36 (6588): Disabling Audio Support for VM.
2026-01-10 17:41:36 (6588): Disabling Clipboard Support for VM.
2026-01-10 17:41:36 (6588): Disabling Drag and Drop Support for VM.
2026-01-10 17:41:37 (6588): Adding storage controller(s) to VM.
2026-01-10 17:41:37 (6588): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-10 17:41:40 (6588): Adding VirtualBox Guest Additions to VM.
2026-01-10 17:41:41 (6588): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-10 17:41:41 (6588): forwarding host port 50095 to guest port 80
2026-01-10 17:41:42 (6588): Enabling remote desktop for VM.
2026-01-10 17:41:42 (6588): Required extension pack not installed, remote desktop not enabled.
2026-01-10 17:41:42 (6588): Enabling shared directory for VM.
2026-01-10 17:41:43 (6588): Starting VM using VBoxManage interface. (boinc_9901fd3cca7b837b, slot#20)
2026-01-10 17:41:54 (6588): Successfully started VM. (PID = '10104')
2026-01-10 17:41:54 (6588): Reporting VM Process ID to BOINC.
2026-01-10 17:41:54 (6588): Guest Log: BIOS: VirtualBox 7.1.12
2026-01-10 17:41:54 (6588): Guest Log: CPUID EDX: 0x178bfbff
2026-01-10 17:41:54 (6588): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-10 17:41:54 (6588): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-10 17:41:54 (6588): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-10 17:41:54 (6588): Detected: Web Application Enabled (http://localhost:50095)
2026-01-10 17:41:54 (6588): Preference change detected
2026-01-10 17:41:54 (6588): Setting CPU throttle for VM. (90%)
2026-01-10 17:41:55 (6588): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-10 17:41:57 (6588): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-10 17:41:57 (6588): Guest Log: BIOS: Booting from Hard Disk...
2026-01-10 17:42:13 (6588): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-10 17:42:13 (6588): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-10 17:42:13 (6588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-10 17:43:00 (6588): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-10 17:43:00 (6588): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-10 17:44:02 (6588): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-10 17:44:02 (6588): Guest Log: 00:00:00.000431 main     Log opened 2026-01-10T17:44:00.034840000Z
2026-01-10 17:44:02 (6588): Guest Log: 00:00:00.001848 main     OS Product: Linux
2026-01-10 17:44:02 (6588): Guest Log: 00:00:00.002252 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-10 17:44:02 (6588): Guest Log: 00:00:00.003898 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-10 17:44:02 (6588): Guest Log: 00:00:00.004281 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-10 17:44:02 (6588): Guest Log: 00:00:00.004283 main     Process ID: 1388
2026-01-10 17:44:02 (6588): Guest Log: 00:00:00.004285 main     Package type: LINUX_64BITS_GENERIC
2026-01-10 17:44:02 (6588): Guest Log: 00:00:00.012833 main     5.2.32 r132073 started. Verbose level = 0
2026-01-10 17:44:04 (6588): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-10 17:44:04 (6588): Guest Log: [INFO] Mounting shared directory
2026-01-10 17:44:04 (6588): Guest Log: [INFO] Checking for init_data.xml
2026-01-10 17:44:12 (6588): Guest Log: 00:00:10.039548 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 730 293 000ns (GuestNow=1 768 085 051 795 726 000 ns GuestLast=1 768 067 040 065 433 000 ns fSetTimeLastLoop=true )
2026-01-10 17:45:14 (6588): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-10 17:45:14 (6588): Guest Log: [INFO] Detected branch: prod
2026-01-10 17:45:15 (6588): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-10 17:45:15 (6588): Guest Log: Copying input files
2026-01-10 17:46:09 (6588): Guest Log: Copied input files into RunAtlas.
2026-01-10 17:46:09 (6588): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-10 17:46:09 (6588): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-10 17:46:09 (6588): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-10 17:46:09 (6588): Guest Log: Further information can be found at the LHC@home message board.
2026-01-10 17:46:25 (6588): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-10 17:46:26 (6588): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-10 17:46:26 (6588): Guest Log: 2.6.3.0 1697 1 30160 154994 3 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-10 17:46:33 (6588): Guest Log: copied the webapp to /var/www
2026-01-10 17:46:33 (6588): Guest Log: ATHENA_PROC_NUMBER=8
2026-01-10 17:46:33 (6588): Guest Log: ATHENA_CORE_NUMBER=8
2026-01-10 17:46:34 (6588): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-10 17:46:34 (6588): Guest Log:  *** Starting ATLAS job. (PandaID=6965384267 taskID=47962010) ***
2026-01-10 19:22:00 (6588): Status Report: Elapsed Time: '6000.015570'
2026-01-10 19:22:00 (6588): Status Report: CPU Time: '23948.640625'
2026-01-10 21:02:05 (6588): Status Report: Elapsed Time: '12000.015570'
2026-01-10 21:02:05 (6588): Status Report: CPU Time: '67025.359375'
2026-01-10 22:42:11 (6588): Status Report: Elapsed Time: '18000.015570'
2026-01-10 22:42:11 (6588): Status Report: CPU Time: '110133.765625'
2026-01-10 23:54:58 (6588): Guest Log:  *** Job finished ***
2026-01-10 23:54:58 (6588): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-10 23:54:58 (6588): Guest Log: 2026-01-11 04:54:30,608 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-10 23:54:58 (6588): Guest Log: 2026-01-11 04:54:30,608 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-10 23:54:58 (6588): Guest Log: 2026-01-11 04:54:43,801 | INFO     | [monitor] cgroup control has ended
2026-01-10 23:54:58 (6588): Guest Log: 2026-01-11 04:54:45,058 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140419128760128)>', '<ExcThread(monitor, started 140418318595840)>']
2026-01-10 23:54:58 (6588): Guest Log: 2026-01-11 04:54:45,809 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-10 23:54:58 (6588): Guest Log: 2026-01-11 04:54:45,811 | INFO     | [monitor] control thread has ended
2026-01-10 23:54:58 (6588): Guest Log: 2026-01-11 04:54:50,065 | INFO     | all workflow threads have been joined
2026-01-10 23:54:58 (6588): Guest Log: 2026-01-11 04:54:50,067 | INFO     | end of generic workflow (traces error code: 0)
2026-01-10 23:54:58 (6588): Guest Log: 2026-01-11 04:54:50,070 | INFO     | traces error code: 0
2026-01-10 23:54:59 (6588): Guest Log: 2026-01-11 04:54:50,072 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-10 23:54:59 (6588): Guest Log: 2026-01-11 04:54:51,317 [wrapper] ==== pilot stdout END ====
2026-01-10 23:54:59 (6588): Guest Log: 2026-01-11 04:54:51,400 [wrapper] ==== wrapper stdout RESUME ====
2026-01-10 23:54:59 (6588): Guest Log: 2026-01-11 04:54:51,472 [wrapper] pilotpid: 6197
2026-01-10 23:54:59 (6588): Guest Log: 2026-01-11 04:54:51,558 [wrapper] Pilot exit status: 0
2026-01-10 23:54:59 (6588): Guest Log: 2026-01-11 04:54:51,761 [wrapper] pandaids: 6965384267
2026-01-10 23:54:59 (6588): Guest Log: 2026-01-11 04:54:52,251 [wrapper] cleanup supervisor_pilot 28280 6198
2026-01-10 23:54:59 (6588): Guest Log: 2026-01-11 04:54:52,339 [wrapper] Test setup, not cleaning
2026-01-10 23:54:59 (6588): Guest Log: 2026-01-11 04:54:52,412 [wrapper] apfmon messages muted
2026-01-10 23:54:59 (6588): Guest Log: 2026-01-11 04:54:52,474 [wrapper] ==== wrapper stdout END ====
2026-01-10 23:54:59 (6588): Guest Log: 2026-01-11 04:54:52,566 [wrapper] ==== wrapper stderr END ====
2026-01-10 23:54:59 (6588): Guest Log:  *** Error codes and diagnostics ***
2026-01-10 23:54:59 (6588): Guest Log:     "exeErrorCode": 0,
2026-01-10 23:54:59 (6588): Guest Log:     "exeErrorDiag": "",
2026-01-10 23:54:59 (6588): Guest Log:     "pilotErrorCode": 0,
2026-01-10 23:54:59 (6588): Guest Log:     "pilotErrorDiag": "",
2026-01-10 23:54:59 (6588): Guest Log:  *** Listing of results directory ***
2026-01-10 23:54:59 (6588): Guest Log: total 59460
2026-01-10 23:54:59 (6588): Guest Log: -rw-r--r--. 1 atlas atlas   579449 Jan 10 13:14 pilot3.tar.gz
2026-01-10 23:54:59 (6588): Guest Log: -rwx------. 1 atlas atlas    36322 Jan 10 13:14 runpilot2-wrapper.sh
2026-01-10 23:54:59 (6588): Guest Log: -rw-r--r--. 1 atlas atlas     5112 Jan 10 13:15 queuedata.json
2026-01-10 23:54:59 (6588): Guest Log: -rwxr-xr-x. 1 atlas atlas     8591 Jan 10 22:45 init_data.xml
2026-01-10 23:54:59 (6588): Guest Log: -rwxr-xr-x. 1 atlas atlas   592617 Jan 10 22:45 input.tar.gz
2026-01-10 23:54:59 (6588): Guest Log: -rwxr-xr-x. 1 atlas atlas    15847 Jan 10 22:45 start_atlas.sh
2026-01-10 23:54:59 (6588): Guest Log: lrwxrwxrwx. 1 atlas atlas       20 Jan 10 22:46 EVNT.47962006._000101.pool.root.1 -> /data/./ATLAS.root_0
2026-01-10 23:54:59 (6588): Guest Log: -rw-r--r--. 1 atlas atlas     2890 Jan 10 22:46 pandaJob.out
2026-01-10 23:54:59 (6588): Guest Log: -rw-------. 1 atlas atlas   989548 Jan 10 22:50 agis_schedconf.cvmfs.json
2026-01-10 23:54:59 (6588): Guest Log: drwx------. 5 atlas atlas     4096 Jan 10 22:51 pilot3
2026-01-10 23:54:59 (6588): Guest Log: -rw-------. 1 atlas atlas 48684906 Jan 11 04:51 HITS.47962010._002408.pool.root.1
2026-01-10 23:54:59 (6588): Guest Log: -rw-------. 1 atlas atlas     1065 Jan 11 04:52 memory_monitor_summary.json
2026-01-10 23:55:00 (6588): Guest Log: -rw-------. 1 atlas atlas  1516240 Jan 11 04:52 agis_ddmendpoints.agis.ALL.json
2026-01-10 23:55:00 (6588): Guest Log: -rw-------. 1 atlas atlas  1503488 Jan 11 04:52 log.47962010._002408.job.log.tgz.1
2026-01-10 23:55:00 (6588): Guest Log: -rw-------. 1 atlas atlas     8633 Jan 11 04:53 heartbeat.json
2026-01-10 23:55:00 (6588): Guest Log: -rw-------. 1 atlas atlas       95 Jan 11 04:54 pilot_heartbeat.json
2026-01-10 23:55:00 (6588): Guest Log: -rw-------. 1 atlas atlas     4805 Jan 11 04:54 pilotlog.txt
2026-01-10 23:55:00 (6588): Guest Log: -rw-------. 1 atlas atlas  2673720 Jan 11 04:54 log.47962010._002408.job.log.1
2026-01-10 23:55:00 (6588): Guest Log: -rw-------. 1 atlas atlas      353 Jan 11 04:54 output.list
2026-01-10 23:55:00 (6588): Guest Log: -rw-r--r--. 1 atlas atlas      620 Jan 11 04:54 runtime_log
2026-01-10 23:55:00 (6588): Guest Log: -rw-------. 1 atlas atlas  4198400 Jan 11 04:54 result.tar.gz
2026-01-10 23:55:00 (6588): Guest Log: -rw-------. 1 atlas atlas      669 Jan 11 04:54 x8SLDmayny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPahKDmNEZDTn.diag
2026-01-10 23:55:00 (6588): Guest Log: -rw-r--r--. 1 atlas atlas     8767 Jan 11 04:54 runtime_log.err
2026-01-10 23:55:00 (6588): Guest Log: Looking for outputfile HITS.47962010._002408.pool.root.1
2026-01-10 23:55:00 (6588): Guest Log: HITS file was successfully produced
2026-01-10 23:55:00 (6588): Guest Log: -rw-------. 1 atlas atlas 48684906 Jan 11 04:51 /home/atlas/RunAtlas/HITS.47962010._002408.pool.root.1
2026-01-10 23:55:05 (6588): Guest Log: Successfully finished the ATLAS job!
2026-01-10 23:55:05 (6588): Guest Log: Copying the results back to the shared directory!
2026-01-10 23:55:06 (6588): Guest Log:  *** Contents of shared directory: ***
2026-01-10 23:55:06 (6588): Guest Log: total 432908
2026-01-10 23:55:06 (6588): Guest Log: -rwxrwxrwx. 1 root root 391552305 Jan 10 22:41 ATLAS.root_0
2026-01-10 23:55:06 (6588): Guest Log: -rwxrwxrwx. 1 root root  48684906 Jan 11 04:55 HITS.pool.root.1
2026-01-10 23:55:06 (6588): Guest Log: -rwxrwxrwx. 1 root root      8591 Jan 10 22:41 init_data.xml
2026-01-10 23:55:06 (6588): Guest Log: -rwxrwxrwx. 1 root root    592617 Jan 10 21:33 input.tar.gz
2026-01-10 23:55:06 (6588): Guest Log: -rwxrwxrwx. 1 root root   4198400 Jan 11 04:55 result.tar.gz
2026-01-10 23:55:06 (6588): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan 10 21:33 start_atlas.sh
2026-01-10 23:55:06 (6588): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-10 23:55:07 (6588): VM Completion File Detected.
2026-01-10 23:55:07 (6588): Powering off VM.
2026-01-10 23:55:10 (6588): Successfully stopped VM.
2026-01-10 23:55:10 (6588): Deregistering VM. (boinc_9901fd3cca7b837b, slot#20)
2026-01-10 23:55:10 (6588): Removing network bandwidth throttle group from VM.
2026-01-10 23:55:10 (6588): Removing VM from VirtualBox.
2026-01-10 23:55:16 (6588): called boinc_finish(0)

</stderr_txt>
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