Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:29:52 (1957583): wrapper (7.7.26015): starting
13:29:52 (1957583): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 13:29:52] Arguments: --nthreads 8
[2026-01-10 13:29:52] Threads: 8
[2026-01-10 13:29:52] Checking for CVMFS
[2026-01-10 13:29:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 13:29:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 13:29:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 13:29:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 13:29:54] 2.13.3.0 11959 95212 401740 154988 1 115 17651137 32935936 21341 16776704 0 369508702 99.471 495463921 33948 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 13:29:54] CVMFS is ok
[2026-01-10 13:29:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 13:29:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 13:29:54] Further information can be found at the LHC@home message board.
[2026-01-10 13:29:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 13:29:54] Checking for apptainer binary...
[2026-01-10 13:29:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 13:29:54] Running /usr/bin/apptainer --version
[2026-01-10 13:29:54] apptainer version 1.4.5-2.el9
[2026-01-10 13:29:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 13:29:55] c6-12-27-3.aglt2.org
[2026-01-10 13:29:55] apptainer works
[2026-01-10 13:29:55] Set ATHENA_PROC_NUMBER=8
[2026-01-10 13:29:55] Set ATHENA_CORE_NUMBER=8
[2026-01-10 13:29:55] Starting ATLAS job with PandaID=6963077461
[2026-01-10 13:29:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 16:08:16]  *** The last 200 lines of the pilot log: ***
[2026-01-10 16:08:16] 2026-01-10 21:07:17,168 | INFO     | total number of processed events: 400 (read)
[2026-01-10 16:08:16] 2026-01-10 21:07:17,168 | INFO     | executing command: lscpu
[2026-01-10 16:08:16] 2026-01-10 21:07:17,230 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 16:08:16] 2026-01-10 21:07:17,746 | INFO     | monitor loop #632: job 0:6963077461 is in state 'finished'
[2026-01-10 16:08:16] 2026-01-10 21:07:17,746 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 16:08:16] 2026-01-10 21:07:19,167 | INFO     | time since job start (9384s) is within the limit (174528.0s)
[2026-01-10 16:08:16] 2026-01-10 21:07:20,249 | INFO     | monitor loop #633: job 0:6963077461 is in state 'finished'
[2026-01-10 16:08:16] 2026-01-10 21:07:20,249 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 16:08:16] 2026-01-10 21:07:21,045 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 16:08:16] 2026-01-10 21:07:21,058 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2799.673166666668
[2026-01-10 16:08:16] 2026-01-10 21:07:21,076 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963077461/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 16:08:16] 2026-01-10 21:07:21,077 | INFO     | extracted standard info from prmon json
[2026-01-10 16:08:16] 2026-01-10 21:07:21,077 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 16:08:16] 2026-01-10 21:07:21,077 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 16:08:16] 2026-01-10 21:07:21,077 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 16:08:16] 2026-01-10 21:07:21,077 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 16:08:16] 2026-01-10 21:07:21,081 | INFO     | fitting pss+swap vs Time
[2026-01-10 16:08:16] 2026-01-10 21:07:21,081 | INFO     | sum of square deviations: 1110478901.3464038
[2026-01-10 16:08:16] 2026-01-10 21:07:21,082 | INFO     | sum of deviations: -4948286930.97386
[2026-01-10 16:08:16] 2026-01-10 21:07:21,082 | INFO     | mean x: 1768074574.0653596
[2026-01-10 16:08:16] 2026-01-10 21:07:21,082 | INFO     | mean y: 2539464.797385621
[2026-01-10 16:08:16] 2026-01-10 21:07:21,082 | INFO     | intersect: 7881068536.558327
[2026-01-10 16:08:16] 2026-01-10 21:07:21,082 | INFO     | chi2: 2.741868357464007
[2026-01-10 16:08:16] 2026-01-10 21:07:21,083 | INFO     | sum of square deviations: 1005121836.3243217
[2026-01-10 16:08:16] 2026-01-10 21:07:21,083 | INFO     | sum of deviations: 4807643915.486483
[2026-01-10 16:08:16] 2026-01-10 21:07:21,084 | INFO     | mean x: 1768074421.5675676
[2026-01-10 16:08:16] 2026-01-10 21:07:21,084 | INFO     | mean y: 2553216.8513513515
[2026-01-10 16:08:16] 2026-01-10 21:07:21,084 | INFO     | intersect: -8454403868.134138
[2026-01-10 16:08:16] 2026-01-10 21:07:21,084 | INFO     | chi2: 2.08304932439285
[2026-01-10 16:08:16] 2026-01-10 21:07:21,084 | INFO     | current chi2=2.08304932439285 (change=24.028105918276406 %)
[2026-01-10 16:08:16] 2026-01-10 21:07:21,084 | INFO     | right removable region: 147
[2026-01-10 16:08:16] 2026-01-10 21:07:21,084 | INFO     | sum of square deviations: 1005115736.3243217
[2026-01-10 16:08:16] 2026-01-10 21:07:21,085 | INFO     | sum of deviations: -33168441471.75676
[2026-01-10 16:08:16] 2026-01-10 21:07:21,085 | INFO     | mean x: 1768074726.5675676
[2026-01-10 16:08:16] 2026-01-10 21:07:21,085 | INFO     | mean y: 2579830.1756756757
[2026-01-10 16:08:16] 2026-01-10 21:07:21,085 | INFO     | intersect: 58348381180.683914
[2026-01-10 16:08:16] 2026-01-10 21:07:21,086 | INFO     | chi2: 0.9642586172133165
[2026-01-10 16:08:16] 2026-01-10 21:07:21,086 | INFO     | current chi2=0.9642586172133165 (change=64.83206005903314 %)
[2026-01-10 16:08:16] 2026-01-10 21:07:21,086 | INFO     | sum of square deviations: 906636421.3006977
[2026-01-10 16:08:16] 2026-01-10 21:07:21,087 | INFO     | sum of deviations: -33984603617.195824
[2026-01-10 16:08:16] 2026-01-10 21:07:21,087 | INFO     | mean x: 1768074879.06993
[2026-01-10 16:08:16] 2026-01-10 21:07:21,087 | INFO     | mean y: 2581076.4195804195
[2026-01-10 16:08:16] 2026-01-10 21:07:21,087 | INFO     | intersect: 66277575681.76455
[2026-01-10 16:08:16] 2026-01-10 21:07:21,088 | INFO     | chi2: 0.9438222302888638
[2026-01-10 16:08:16] 2026-01-10 21:07:21,088 | INFO     | current chi2=0.9438222302888638 (change=2.1193885706215787 %)
[2026-01-10 16:08:16] 2026-01-10 21:07:21,088 | INFO     | left removable region: 20
[2026-01-10 16:08:16] 2026-01-10 21:07:21,088 | INFO     | sum of square deviations: 635094673.7165364
[2026-01-10 16:08:16] 2026-01-10 21:07:21,089 | INFO     | sum of deviations: -11903037771.559053
[2026-01-10 16:08:16] 2026-01-10 21:07:21,089 | INFO     | mean x: 1768075001.047244
[2026-01-10 16:08:16] 2026-01-10 21:07:21,089 | INFO     | mean y: 2575217.2598425196
[2026-01-10 16:08:16] 2026-01-10 21:07:21,089 | INFO     | intersect: 33140096899.275932
[2026-01-10 16:08:16] 2026-01-10 21:07:21,089 | INFO     | chi2: 0.1971734402485835
[2026-01-10 16:08:16] 2026-01-10 21:07:21,089 | INFO     | current memory leak: -18.74 B/s (using 127 data points, chi2=0.20)
[2026-01-10 16:08:16] 2026-01-10 21:07:21,090 | INFO     | could have reported an average CPU frequency of 2711 MHz (9 samples)
[2026-01-10 16:08:16] 2026-01-10 21:07:21,090 | INFO     | ..............................
[2026-01-10 16:08:16] 2026-01-10 21:07:21,090 | INFO     | . Timing measurements:
[2026-01-10 16:08:16] 2026-01-10 21:07:21,090 | INFO     | . get job = 0 s
[2026-01-10 16:08:16] 2026-01-10 21:07:21,090 | INFO     | . initial setup = 5 s
[2026-01-10 16:08:16] 2026-01-10 21:07:21,090 | INFO     | . payload setup = 14 s
[2026-01-10 16:08:16] 2026-01-10 21:07:21,090 | INFO     | . stage-in = 0 s
[2026-01-10 16:08:16] 2026-01-10 21:07:21,090 | INFO     | . payload execution = 9307 s
[2026-01-10 16:08:16] 2026-01-10 21:07:21,090 | INFO     | . stage-out = 0 s
[2026-01-10 16:08:16] 2026-01-10 21:07:21,091 | INFO     | . log creation = 0 s
[2026-01-10 16:08:16] 2026-01-10 21:07:21,091 | INFO     | ..............................
[2026-01-10 16:08:16] 2026-01-10 21:07:21,183 | INFO     | time since job start (9386s) is within the limit (174528.0s)
[2026-01-10 16:08:16] 2026-01-10 21:07:21,258 | INFO     | 
[2026-01-10 16:08:16] 2026-01-10 21:07:21,258 | INFO     | job summary report
[2026-01-10 16:08:16] 2026-01-10 21:07:21,258 | INFO     | --------------------------------------------------
[2026-01-10 16:08:16] 2026-01-10 21:07:21,258 | INFO     | PanDA job id: 6963077461
[2026-01-10 16:08:16] 2026-01-10 21:07:21,258 | INFO     | task id: 47898826
[2026-01-10 16:08:16] 2026-01-10 21:07:21,258 | INFO     | errors: (none)
[2026-01-10 16:08:16] 2026-01-10 21:07:21,258 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 16:08:16] 2026-01-10 21:07:21,258 | INFO     | pilot state: finished 
[2026-01-10 16:08:16] 2026-01-10 21:07:21,259 | INFO     | transexitcode: 0
[2026-01-10 16:08:16] 2026-01-10 21:07:21,259 | INFO     | exeerrorcode: 0
[2026-01-10 16:08:16] 2026-01-10 21:07:21,259 | INFO     | exeerrordiag: 
[2026-01-10 16:08:16] 2026-01-10 21:07:21,259 | INFO     | exitcode: 0
[2026-01-10 16:08:16] 2026-01-10 21:07:21,259 | INFO     | exitmsg: OK
[2026-01-10 16:08:16] 2026-01-10 21:07:21,259 | INFO     | cpuconsumptiontime: 59724 s
[2026-01-10 16:08:16] 2026-01-10 21:07:21,259 | INFO     | nevents: 400
[2026-01-10 16:08:16] 2026-01-10 21:07:21,259 | INFO     | neventsw: 0
[2026-01-10 16:08:16] 2026-01-10 21:07:21,259 | INFO     | pid: 1970722
[2026-01-10 16:08:16] 2026-01-10 21:07:21,259 | INFO     | pgrp: 1970722
[2026-01-10 16:08:16] 2026-01-10 21:07:21,259 | INFO     | corecount: 8
[2026-01-10 16:08:16] 2026-01-10 21:07:21,259 | INFO     | event service: False
[2026-01-10 16:08:16] 2026-01-10 21:07:21,259 | INFO     | sizes: {0: 2283141, 1: 2283826, 2: 2284025, 13: 2284025, 24: 2284081, 32: 2284371, 35: 2284527, 9325: 2312915, 9326: 2321913, 9329: 2321969, 9333: 2322227}
[2026-01-10 16:08:16] 2026-01-10 21:07:21,260 | INFO     | --------------------------------------------------
[2026-01-10 16:08:16] 2026-01-10 21:07:21,260 | INFO     | 
[2026-01-10 16:08:16] 2026-01-10 21:07:21,260 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 16:08:16] 2026-01-10 21:07:21,279 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 16:08:16] 2026-01-10 21:07:21,280 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 16:08:16] 2026-01-10 21:07:21,280 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 16:08:16] 2026-01-10 21:07:21,280 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 16:08:16] 2026-01-10 21:07:21,280 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 16:08:16] 2026-01-10 21:07:21,280 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 16:08:16] 2026-01-10 21:07:21,280 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 16:08:16] 2026-01-10 21:07:21,280 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 16:08:16] 2026-01-10 21:07:21,280 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 16:08:16] 2026-01-10 21:07:21,280 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 16:08:16] 2026-01-10 21:07:21,280 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 16:08:16] 2026-01-10 21:07:21,280 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 16:08:16] 2026-01-10 21:07:21,280 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 16:08:16] 2026-01-10 21:07:21,280 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 16:08:16] 2026-01-10 21:07:21,281 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 16:08:16] 2026-01-10 21:07:21,281 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 16:08:16] 2026-01-10 21:07:21,281 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 16:08:16] 2026-01-10 21:07:21,281 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 16:08:16] 2026-01-10 21:07:21,281 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 16:08:16] 2026-01-10 21:07:21,281 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 16:08:16] 2026-01-10 21:07:21,281 | INFO     | job 6963077461 has completed (purged errors)
[2026-01-10 16:08:16] 2026-01-10 21:07:21,281 | INFO     | overall cleanup function is called
[2026-01-10 16:08:16] 2026-01-10 21:07:22,289 | INFO     | --- collectZombieJob: --- 10, [1970722]
[2026-01-10 16:08:16] 2026-01-10 21:07:22,289 | INFO     | zombie collector waiting for pid 1970722
[2026-01-10 16:08:16] 2026-01-10 21:07:22,289 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 16:08:16] 2026-01-10 21:07:22,289 | INFO     | collected zombie processes
[2026-01-10 16:08:16] 2026-01-10 21:07:22,289 | INFO     | will attempt to kill all subprocesses of pid=1970722
[2026-01-10 16:08:16] 2026-01-10 21:07:22,592 | INFO     | process IDs to be killed: [1970722] (in reverse order)
[2026-01-10 16:08:16] 2026-01-10 21:07:22,699 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 16:08:16] 2026-01-10 21:07:22,699 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 16:08:16] 2026-01-10 21:07:22,710 | INFO     | did not find any defunct processes belonging to 1970722
[2026-01-10 16:08:16] 2026-01-10 21:07:22,721 | INFO     | did not find any defunct processes belonging to 1970722
[2026-01-10 16:08:16] 2026-01-10 21:07:22,721 | INFO     | ready for new job
[2026-01-10 16:08:16] 2026-01-10 21:07:22,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 16:08:16] 2026-01-10 21:07:22,723 | INFO     | ***************************************
[2026-01-10 16:08:16] 2026-01-10 21:07:22,723 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 16:08:16] 2026-01-10 21:07:22,723 | INFO     | ***************************************
[2026-01-10 16:08:16] 2026-01-10 21:07:22,723 | INFO     | 
[2026-01-10 16:08:16] 2026-01-10 21:07:22,729 | INFO     | architecture information:
[2026-01-10 16:08:16] 2026-01-10 21:07:22,729 | INFO     | executing command: cat /etc/os-release
[2026-01-10 16:08:16] 2026-01-10 21:07:22,744 | INFO     | cat /etc/os-release:
[2026-01-10 16:08:16] NAME="CentOS Linux"
[2026-01-10 16:08:16] VERSION="7 (Core)"
[2026-01-10 16:08:16] ID="centos"
[2026-01-10 16:08:16] ID_LIKE="rhel fedora"
[2026-01-10 16:08:16] VERSION_ID="7"
[2026-01-10 16:08:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 16:08:16] ANSI_COLOR="0;31"
[2026-01-10 16:08:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 16:08:16] HOME_URL="https://www.centos.org/"
[2026-01-10 16:08:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 16:08:16] 
[2026-01-10 16:08:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 16:08:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 16:08:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 16:08:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 16:08:16] 
[2026-01-10 16:08:16] 2026-01-10 21:07:22,744 | INFO     | ***************************************
[2026-01-10 16:08:16] 2026-01-10 21:07:23,247 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 16:08:16] 2026-01-10 21:07:23,264 | INFO     | sufficient remaining disk space (96541343744 B)
[2026-01-10 16:08:16] 2026-01-10 21:07:23,265 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 16:08:16] 2026-01-10 21:07:23,265 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 16:08:16] 2026-01-10 21:07:23,265 | INFO     | update_server=False
[2026-01-10 16:08:16] 2026-01-10 21:07:23,265 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 16:08:16] 2026-01-10 21:07:23,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 16:08:16] 2026-01-10 21:07:23,265 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 16:08:16] 2026-01-10 21:07:23,758 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 16:08:16] 2026-01-10 21:07:23,758 | INFO     | aborting loop
[2026-01-10 16:08:16] 2026-01-10 21:07:23,827 | INFO     | all job control threads have been joined
[2026-01-10 16:08:16] 2026-01-10 21:07:24,117 | INFO     | all data control threads have been joined
[2026-01-10 16:08:16] 2026-01-10 21:07:24,233 | INFO     | all payload control threads have been joined
[2026-01-10 16:08:16] 2026-01-10 21:07:24,271 | INFO     | [job] retrieve thread has finished
[2026-01-10 16:08:16] 2026-01-10 21:07:24,368 | INFO     | [data] copytool_in thread has finished
[2026-01-10 16:08:16] 2026-01-10 21:07:24,521 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 16:08:16] 2026-01-10 21:07:24,763 | INFO     | [job] job monitor thread has finished
[2026-01-10 16:08:16] 2026-01-10 21:07:24,766 | INFO     | [job] validate thread has finished
[2026-01-10 16:08:16] 2026-01-10 21:07:24,832 | INFO     | [job] control thread has finished
[2026-01-10 16:08:16] 2026-01-10 21:07:24,890 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 16:08:16] 2026-01-10 21:07:25,122 | INFO     | [data] control thread has finished
[2026-01-10 16:08:16] 2026-01-10 21:07:25,240 | INFO     | [payload] control thread has finished
[2026-01-10 16:08:16] 2026-01-10 21:07:25,274 | INFO     | [data] copytool_out thread has finished
[2026-01-10 16:08:16] 2026-01-10 21:07:25,464 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 16:08:16] 2026-01-10 21:07:25,474 | INFO     | [payload] failed_post thread has finished
[2026-01-10 16:08:16] 2026-01-10 21:07:25,486 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 16:08:16] 2026-01-10 21:07:25,661 | INFO     | [payload] validate_post thread has finished
[2026-01-10 16:08:16] 2026-01-10 21:07:26,198 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 16:08:16] 2026-01-10 21:07:27,203 | INFO     | [job] queue monitor thread has finished
[2026-01-10 16:08:16] 2026-01-10 21:07:27,272 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 16:08:16] 2026-01-10 21:07:54,693 | INFO     | PID=1963480 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 16:08:16] 2026-01-10 21:07:54,693 | INFO     | .. there are 13 such processes running
[2026-01-10 16:08:16] 2026-01-10 21:07:54,694 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 16:08:16] 2026-01-10 21:07:54,694 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 16:08:16] 2026-01-10 21:07:54,694 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 16:08:16] 2026-01-10 21:08:10,616 | INFO     | [monitor] cgroup control has ended
[2026-01-10 16:08:16] 2026-01-10 21:08:10,741 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140254339880768)>', '<ExcThread(monitor, started 140253767661312)>']
[2026-01-10 16:08:16] 2026-01-10 21:08:10,771 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 16:08:16] 2026-01-10 21:08:10,771 | INFO     | [monitor] control thread has ended
[2026-01-10 16:08:16] 2026-01-10 21:08:15,766 | INFO     | all workflow threads have been joined
[2026-01-10 16:08:16] 2026-01-10 21:08:15,766 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 16:08:16] 2026-01-10 21:08:15,767 | INFO     | traces error code: 0
[2026-01-10 16:08:16] 2026-01-10 21:08:15,767 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 16:08:16] 2026-01-10 21:08:15,921 [wrapper] ==== pilot stdout END ====
[2026-01-10 16:08:16] 2026-01-10 21:08:15,924 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 16:08:16] 2026-01-10 21:08:15,927 [wrapper] pilotpid: 1963480
[2026-01-10 16:08:16] 2026-01-10 21:08:15,929 [wrapper] Pilot exit status: 0
[2026-01-10 16:08:16] 2026-01-10 21:08:15,942 [wrapper] pandaids: 6963077461
[2026-01-10 16:08:16] 2026-01-10 21:08:16,015 [wrapper] cleanup supervisor_pilot 2304076 1963481
[2026-01-10 16:08:16] 2026-01-10 21:08:16,018 [wrapper] Test setup, not cleaning
[2026-01-10 16:08:16] 2026-01-10 21:08:16,021 [wrapper] apfmon messages muted
[2026-01-10 16:08:16] 2026-01-10 21:08:16,023 [wrapper] ==== wrapper stdout END ====
[2026-01-10 16:08:16] 2026-01-10 21:08:16,026 [wrapper] ==== wrapper stderr END ====
[2026-01-10 16:08:16]  *** Error codes and diagnostics ***
[2026-01-10 16:08:16]     "exeErrorCode": 0,
[2026-01-10 16:08:16]     "exeErrorDiag": "",
[2026-01-10 16:08:16]     "pilotErrorCode": 0,
[2026-01-10 16:08:16]     "pilotErrorDiag": "",
[2026-01-10 16:08:16]  *** Listing of results directory ***
[2026-01-10 16:08:16] total 438572
[2026-01-10 16:08:16] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 06:06 pilot3.tar.gz
[2026-01-10 16:08:16] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 06:07 queuedata.json
[2026-01-10 16:08:16] -rwx------. 1 boincer umatlas     36322 Jan  8 06:07 runpilot2-wrapper.sh
[2026-01-10 16:08:16] -rw-r--r--. 1 boincer umatlas       100 Jan 10 13:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 16:08:16] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 13:29 run_atlas
[2026-01-10 16:08:16] -rw-r--r--. 1 boincer umatlas       105 Jan 10 13:29 job.xml
[2026-01-10 16:08:16] -rw-r--r--. 2 boincer umatlas 223532068 Jan 10 13:29 EVNT.47898824._000960.pool.root.1
[2026-01-10 16:08:16] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 13:29 start_atlas.sh
[2026-01-10 16:08:16] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 13:29 shared
[2026-01-10 16:08:16] -rw-r--r--. 2 boincer umatlas    592398 Jan 10 13:29 input.tar.gz
[2026-01-10 16:08:16] -rw-r--r--. 1 boincer umatlas         0 Jan 10 13:29 boinc_lockfile
[2026-01-10 16:08:16] -rw-r--r--. 1 boincer umatlas      2519 Jan 10 13:29 pandaJob.out
[2026-01-10 16:08:16] -rw-------. 1 boincer umatlas        57 Jan 10 13:29 setup.sh.local
[2026-01-10 16:08:16] -rw-------. 1 boincer umatlas    989548 Jan 10 13:30 agis_schedconf.cvmfs.json
[2026-01-10 16:08:16] -rw-------. 1 boincer umatlas   1516240 Jan 10 13:30 agis_ddmendpoints.agis.ALL.json
[2026-01-10 16:08:16] drwx------. 5 boincer umatlas      4096 Jan 10 13:30 pilot3
[2026-01-10 16:08:16] -rw-r--r--. 1 boincer umatlas      6878 Jan 10 16:04 init_data.xml
[2026-01-10 16:08:16] -rw-------. 1 boincer umatlas 218301940 Jan 10 16:06 HITS.47898826._024116.pool.root.1
[2026-01-10 16:08:16] -rw-r--r--. 1 boincer umatlas       529 Jan 10 16:06 boinc_task_state.xml
[2026-01-10 16:08:16] -rw-------. 1 boincer umatlas      1036 Jan 10 16:07 memory_monitor_summary.json
[2026-01-10 16:08:16] -rw-------. 1 boincer umatlas    395682 Jan 10 16:07 log.47898826._024116.job.log.tgz.1
[2026-01-10 16:08:16] -rw-------. 1 boincer umatlas      7818 Jan 10 16:07 heartbeat.json
[2026-01-10 16:08:16] -rw-------. 1 boincer umatlas        95 Jan 10 16:07 pilot_heartbeat.json
[2026-01-10 16:08:16] -rw-r--r--. 1 boincer umatlas        27 Jan 10 16:07 wrapper_checkpoint.txt
[2026-01-10 16:08:16] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 16:07 boinc_mmap_file
[2026-01-10 16:08:16] -rw-------. 1 boincer umatlas      4824 Jan 10 16:08 pilotlog.txt
[2026-01-10 16:08:16] -rw-------. 1 boincer umatlas   1274743 Jan 10 16:08 log.47898826._024116.job.log.1
[2026-01-10 16:08:16] -rw-------. 1 boincer umatlas       357 Jan 10 16:08 output.list
[2026-01-10 16:08:16] -rw-r--r--. 1 boincer umatlas       620 Jan 10 16:08 runtime_log
[2026-01-10 16:08:16] -rw-------. 1 boincer umatlas   1689600 Jan 10 16:08 result.tar.gz
[2026-01-10 16:08:16] -rw-r--r--. 1 boincer umatlas      9352 Jan 10 16:08 runtime_log.err
[2026-01-10 16:08:16] -rw-------. 1 boincer umatlas       655 Jan 10 16:08 5u4KDmb22x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmx1eKDm8F1YVn.diag
[2026-01-10 16:08:16] -rw-r--r--. 1 boincer umatlas     21478 Jan 10 16:08 stderr.txt
[2026-01-10 16:08:16] HITS file was successfully produced:
[2026-01-10 16:08:16] -rw-------. 1 boincer umatlas 218301940 Jan 10 16:06 shared/HITS.pool.root.1
[2026-01-10 16:08:16]  *** Contents of shared directory: ***
[2026-01-10 16:08:16] total 433740
[2026-01-10 16:08:16] -rw-r--r--. 2 boincer umatlas 223532068 Jan 10 13:29 ATLAS.root_0
[2026-01-10 16:08:16] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 13:29 start_atlas.sh
[2026-01-10 16:08:16] -rw-r--r--. 2 boincer umatlas    592398 Jan 10 13:29 input.tar.gz
[2026-01-10 16:08:16] -rw-------. 1 boincer umatlas 218301940 Jan 10 16:06 HITS.pool.root.1
[2026-01-10 16:08:16] -rw-------. 1 boincer umatlas   1689600 Jan 10 16:08 result.tar.gz
16:08:38 (1957583): run_atlas exited; CPU time 60070.037249
16:08:38 (1957583): called boinc_finish(0)

</stderr_txt>
]]>

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