Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:29:29 (3884277): wrapper (7.7.26015): starting
13:29:29 (3884277): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 13:29:29] Arguments: --nthreads 9
[2026-01-10 13:29:29] Threads: 9
[2026-01-10 13:29:29] Checking for CVMFS
[2026-01-10 13:29:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 13:29:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 13:29:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 13:29:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 13:29:31] 2.13.3.0 8635 24679 155072 154988 0 13 21038737 40960000 15502 16776704 0 37760733 99.763 22085537 38711 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 13:29:31] CVMFS is ok
[2026-01-10 13:29:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 13:29:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 13:29:31] Further information can be found at the LHC@home message board.
[2026-01-10 13:29:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 13:29:31] Checking for apptainer binary...
[2026-01-10 13:29:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 13:29:31] Running /usr/bin/apptainer --version
[2026-01-10 13:29:31] apptainer version 1.4.5-2.el9
[2026-01-10 13:29:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 13:29:31] c-212-8.aglt2.org
[2026-01-10 13:29:31] apptainer works
[2026-01-10 13:29:31] Set ATHENA_PROC_NUMBER=9
[2026-01-10 13:29:31] Set ATHENA_CORE_NUMBER=9
[2026-01-10 13:29:31] Starting ATLAS job with PandaID=6962314823
[2026-01-10 13:29:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 16:47:27]  *** The last 200 lines of the pilot log: ***
[2026-01-10 16:47:27] 2026-01-10 21:46:53,830 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962314823/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 16:47:27] 2026-01-10 21:46:53,831 | INFO     | extracted standard info from prmon json
[2026-01-10 16:47:27] 2026-01-10 21:46:53,831 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 16:47:27] 2026-01-10 21:46:53,831 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 16:47:27] 2026-01-10 21:46:53,831 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 16:47:27] 2026-01-10 21:46:53,832 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 16:47:27] 2026-01-10 21:46:53,835 | INFO     | fitting pss+swap vs Time
[2026-01-10 16:47:27] 2026-01-10 21:46:53,835 | INFO     | sum of square deviations: 2263977332.5
[2026-01-10 16:47:27] 2026-01-10 21:46:53,836 | INFO     | sum of deviations: -47006822131.5
[2026-01-10 16:47:27] 2026-01-10 21:46:53,836 | INFO     | mean x: 1768075705.5
[2026-01-10 16:47:27] 2026-01-10 21:46:53,837 | INFO     | mean y: 2628634.469072165
[2026-01-10 16:47:27] 2026-01-10 21:46:53,837 | INFO     | intersect: 36713075780.01922
[2026-01-10 16:47:27] 2026-01-10 21:46:53,837 | INFO     | chi2: 2.197759857412593
[2026-01-10 16:47:27] 2026-01-10 21:46:53,837 | INFO     | sum of square deviations: 2093397390.0
[2026-01-10 16:47:27] 2026-01-10 21:46:53,838 | INFO     | sum of deviations: -33042740896.999985
[2026-01-10 16:47:27] 2026-01-10 21:46:53,839 | INFO     | mean x: 1768075553.0
[2026-01-10 16:47:27] 2026-01-10 21:46:53,839 | INFO     | mean y: 2640885.502645503
[2026-01-10 16:47:27] 2026-01-10 21:46:53,839 | INFO     | intersect: 27910415426.14969
[2026-01-10 16:47:27] 2026-01-10 21:46:53,839 | INFO     | chi2: 1.5186746091013843
[2026-01-10 16:47:27] 2026-01-10 21:46:53,839 | INFO     | current chi2=1.5186746091013843 (change=30.898974063103097 %)
[2026-01-10 16:47:27] 2026-01-10 21:46:53,839 | INFO     | sum of square deviations: 1931608310.0
[2026-01-10 16:47:27] 2026-01-10 21:46:53,840 | INFO     | sum of deviations: -31796868570.5
[2026-01-10 16:47:27] 2026-01-10 21:46:53,840 | INFO     | mean x: 1768075400.5
[2026-01-10 16:47:27] 2026-01-10 21:46:53,841 | INFO     | mean y: 2642060.1141304346
[2026-01-10 16:47:27] 2026-01-10 21:46:53,841 | INFO     | intersect: 29107539176.8762
[2026-01-10 16:47:27] 2026-01-10 21:46:53,841 | INFO     | chi2: 1.514552057380359
[2026-01-10 16:47:27] 2026-01-10 21:46:53,841 | INFO     | current chi2=1.514552057380359 (change=0.2714572098801748 %)
[2026-01-10 16:47:27] 2026-01-10 21:46:53,841 | INFO     | right removable region: 183
[2026-01-10 16:47:27] 2026-01-10 21:46:53,841 | INFO     | sum of square deviations: 2093397390.0
[2026-01-10 16:47:27] 2026-01-10 21:46:53,842 | INFO     | sum of deviations: -67860631691.99999
[2026-01-10 16:47:27] 2026-01-10 21:46:53,842 | INFO     | mean x: 1768075858.0
[2026-01-10 16:47:27] 2026-01-10 21:46:53,843 | INFO     | mean y: 2646927.386243386
[2026-01-10 16:47:27] 2026-01-10 21:46:53,843 | INFO     | intersect: 57317490815.31853
[2026-01-10 16:47:27] 2026-01-10 21:46:53,843 | INFO     | chi2: 1.0332514407196391
[2026-01-10 16:47:27] 2026-01-10 21:46:53,843 | INFO     | current chi2=1.0332514407196391 (change=52.98615373127805 %)
[2026-01-10 16:47:27] 2026-01-10 21:46:53,843 | INFO     | sum of square deviations: 1931608310.0
[2026-01-10 16:47:27] 2026-01-10 21:46:53,844 | INFO     | sum of deviations: -59499915236.49999
[2026-01-10 16:47:27] 2026-01-10 21:46:53,844 | INFO     | mean x: 1768076010.5
[2026-01-10 16:47:27] 2026-01-10 21:46:53,844 | INFO     | mean y: 2639037.2663043477
[2026-01-10 16:47:27] 2026-01-10 21:46:53,844 | INFO     | intersect: 54465219370.87394
[2026-01-10 16:47:27] 2026-01-10 21:46:53,845 | INFO     | chi2: 1.022077874191512
[2026-01-10 16:47:27] 2026-01-10 21:46:53,845 | INFO     | current chi2=1.022077874191512 (change=1.0813985916482254 %)
[2026-01-10 16:47:27] 2026-01-10 21:46:53,845 | INFO     | left removable region: 20
[2026-01-10 16:47:27] 2026-01-10 21:46:53,845 | INFO     | sum of square deviations: 1342841922.0
[2026-01-10 16:47:27] 2026-01-10 21:46:53,846 | INFO     | sum of deviations: -26633046275.999996
[2026-01-10 16:47:27] 2026-01-10 21:46:53,846 | INFO     | mean x: 1768075980.0
[2026-01-10 16:47:27] 2026-01-10 21:46:53,846 | INFO     | mean y: 2633757.8588957055
[2026-01-10 16:47:27] 2026-01-10 21:46:53,846 | INFO     | intersect: 35069493544.81753
[2026-01-10 16:47:27] 2026-01-10 21:46:53,846 | INFO     | chi2: 0.2571090065519125
[2026-01-10 16:47:27] 2026-01-10 21:46:53,847 | INFO     | current memory leak: -19.83 B/s (using 163 data points, chi2=0.26)
[2026-01-10 16:47:27] 2026-01-10 21:46:53,847 | INFO     | could have reported an average CPU frequency of 3194 MHz (10 samples)
[2026-01-10 16:47:27] 2026-01-10 21:46:53,847 | INFO     | ..............................
[2026-01-10 16:47:27] 2026-01-10 21:46:53,847 | INFO     | . Timing measurements:
[2026-01-10 16:47:27] 2026-01-10 21:46:53,847 | INFO     | . get job = 0 s
[2026-01-10 16:47:27] 2026-01-10 21:46:53,847 | INFO     | . initial setup = 2 s
[2026-01-10 16:47:27] 2026-01-10 21:46:53,847 | INFO     | . payload setup = 7 s
[2026-01-10 16:47:27] 2026-01-10 21:46:53,848 | INFO     | . stage-in = 0 s
[2026-01-10 16:47:27] 2026-01-10 21:46:53,848 | INFO     | . payload execution = 11785 s
[2026-01-10 16:47:27] 2026-01-10 21:46:53,848 | INFO     | . stage-out = 2 s
[2026-01-10 16:47:27] 2026-01-10 21:46:53,848 | INFO     | . log creation = 0 s
[2026-01-10 16:47:27] 2026-01-10 21:46:53,848 | INFO     | ..............................
[2026-01-10 16:47:27] 2026-01-10 21:46:54,193 | INFO     | 
[2026-01-10 16:47:27] 2026-01-10 21:46:54,193 | INFO     | job summary report
[2026-01-10 16:47:27] 2026-01-10 21:46:54,193 | INFO     | --------------------------------------------------
[2026-01-10 16:47:27] 2026-01-10 21:46:54,193 | INFO     | PanDA job id: 6962314823
[2026-01-10 16:47:27] 2026-01-10 21:46:54,193 | INFO     | task id: 47898826
[2026-01-10 16:47:27] 2026-01-10 21:46:54,193 | INFO     | errors: (none)
[2026-01-10 16:47:27] 2026-01-10 21:46:54,193 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 16:47:27] 2026-01-10 21:46:54,193 | INFO     | pilot state: finished 
[2026-01-10 16:47:27] 2026-01-10 21:46:54,194 | INFO     | transexitcode: 0
[2026-01-10 16:47:27] 2026-01-10 21:46:54,194 | INFO     | exeerrorcode: 0
[2026-01-10 16:47:27] 2026-01-10 21:46:54,194 | INFO     | exeerrordiag: 
[2026-01-10 16:47:27] 2026-01-10 21:46:54,194 | INFO     | exitcode: 0
[2026-01-10 16:47:27] 2026-01-10 21:46:54,194 | INFO     | exitmsg: OK
[2026-01-10 16:47:27] 2026-01-10 21:46:54,194 | INFO     | cpuconsumptiontime: 42089 s
[2026-01-10 16:47:27] 2026-01-10 21:46:54,194 | INFO     | nevents: 400
[2026-01-10 16:47:27] 2026-01-10 21:46:54,194 | INFO     | neventsw: 0
[2026-01-10 16:47:27] 2026-01-10 21:46:54,194 | INFO     | pid: 3896540
[2026-01-10 16:47:27] 2026-01-10 21:46:54,194 | INFO     | pgrp: 3896540
[2026-01-10 16:47:27] 2026-01-10 21:46:54,194 | INFO     | corecount: 9
[2026-01-10 16:47:27] 2026-01-10 21:46:54,194 | INFO     | event service: False
[2026-01-10 16:47:27] 2026-01-10 21:46:54,194 | INFO     | sizes: {0: 2283136, 1: 2283992, 6: 2284254, 12: 2284282, 11795: 2314010, 11796: 2314009, 11799: 2323191, 11801: 2323247, 11807: 2323441}
[2026-01-10 16:47:27] 2026-01-10 21:46:54,195 | INFO     | --------------------------------------------------
[2026-01-10 16:47:27] 2026-01-10 21:46:54,195 | INFO     | 
[2026-01-10 16:47:27] 2026-01-10 21:46:54,195 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 16:47:27] 2026-01-10 21:46:54,222 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 16:47:27] 2026-01-10 21:46:54,222 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 16:47:27] 2026-01-10 21:46:54,223 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 16:47:27] 2026-01-10 21:46:54,223 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 16:47:27] 2026-01-10 21:46:54,223 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 16:47:27] 2026-01-10 21:46:54,223 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 16:47:27] 2026-01-10 21:46:54,223 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 16:47:27] 2026-01-10 21:46:54,223 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 16:47:27] 2026-01-10 21:46:54,223 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 16:47:27] 2026-01-10 21:46:54,223 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 16:47:27] 2026-01-10 21:46:54,223 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 16:47:27] 2026-01-10 21:46:54,223 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 16:47:27] 2026-01-10 21:46:54,223 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 16:47:27] 2026-01-10 21:46:54,223 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 16:47:27] 2026-01-10 21:46:54,224 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 16:47:27] 2026-01-10 21:46:54,224 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 16:47:27] 2026-01-10 21:46:54,224 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 16:47:27] 2026-01-10 21:46:54,224 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 16:47:27] 2026-01-10 21:46:54,224 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 16:47:27] 2026-01-10 21:46:54,224 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 16:47:27] 2026-01-10 21:46:54,224 | INFO     | job 6962314823 has completed (purged errors)
[2026-01-10 16:47:27] 2026-01-10 21:46:54,224 | INFO     | overall cleanup function is called
[2026-01-10 16:47:27] 2026-01-10 21:46:54,764 | INFO     | PID=3888034 has CPU usage=12.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-10 16:47:27] 2026-01-10 21:46:54,764 | INFO     | .. there are 13 such processes running
[2026-01-10 16:47:27] 2026-01-10 21:46:55,234 | INFO     | --- collectZombieJob: --- 10, [3896540]
[2026-01-10 16:47:27] 2026-01-10 21:46:55,234 | INFO     | zombie collector waiting for pid 3896540
[2026-01-10 16:47:27] 2026-01-10 21:46:55,234 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 16:47:27] 2026-01-10 21:46:55,234 | INFO     | collected zombie processes
[2026-01-10 16:47:27] 2026-01-10 21:46:55,234 | INFO     | will attempt to kill all subprocesses of pid=3896540
[2026-01-10 16:47:27] 2026-01-10 21:46:55,655 | INFO     | process IDs to be killed: [3896540] (in reverse order)
[2026-01-10 16:47:27] 2026-01-10 21:46:55,791 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 16:47:27] 2026-01-10 21:46:55,792 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 16:47:27] 2026-01-10 21:46:55,807 | INFO     | did not find any defunct processes belonging to 3896540
[2026-01-10 16:47:27] 2026-01-10 21:46:55,820 | INFO     | did not find any defunct processes belonging to 3896540
[2026-01-10 16:47:27] 2026-01-10 21:46:55,821 | INFO     | ready for new job
[2026-01-10 16:47:27] 2026-01-10 21:46:55,821 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 16:47:27] 2026-01-10 21:46:55,823 | INFO     | ***************************************
[2026-01-10 16:47:27] 2026-01-10 21:46:55,823 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 16:47:27] 2026-01-10 21:46:55,823 | INFO     | ***************************************
[2026-01-10 16:47:27] 2026-01-10 21:46:55,823 | INFO     | 
[2026-01-10 16:47:27] 2026-01-10 21:46:55,828 | INFO     | architecture information:
[2026-01-10 16:47:27] 2026-01-10 21:46:55,828 | INFO     | executing command: cat /etc/os-release
[2026-01-10 16:47:27] 2026-01-10 21:46:55,842 | INFO     | cat /etc/os-release:
[2026-01-10 16:47:27] NAME="CentOS Linux"
[2026-01-10 16:47:27] VERSION="7 (Core)"
[2026-01-10 16:47:27] ID="centos"
[2026-01-10 16:47:27] ID_LIKE="rhel fedora"
[2026-01-10 16:47:27] VERSION_ID="7"
[2026-01-10 16:47:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 16:47:27] ANSI_COLOR="0;31"
[2026-01-10 16:47:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 16:47:27] HOME_URL="https://www.centos.org/"
[2026-01-10 16:47:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 16:47:27] 
[2026-01-10 16:47:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 16:47:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 16:47:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 16:47:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 16:47:27] 
[2026-01-10 16:47:27] 2026-01-10 21:46:55,842 | INFO     | ***************************************
[2026-01-10 16:47:27] 2026-01-10 21:46:56,346 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 16:47:27] 2026-01-10 21:46:56,412 | INFO     | sufficient remaining disk space (129772814336 B)
[2026-01-10 16:47:27] 2026-01-10 21:46:56,413 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 16:47:27] 2026-01-10 21:46:56,413 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 16:47:27] 2026-01-10 21:46:56,413 | INFO     | update_server=False
[2026-01-10 16:47:27] 2026-01-10 21:46:56,413 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 16:47:27] 2026-01-10 21:46:56,426 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 16:47:27] 2026-01-10 21:46:56,509 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 16:47:27] 2026-01-10 21:46:56,509 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 16:47:27] 2026-01-10 21:46:56,509 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 16:47:27] 2026-01-10 21:46:56,509 | INFO     | will abort loop
[2026-01-10 16:47:27] 2026-01-10 21:46:56,545 | INFO     | all payload control threads have been joined
[2026-01-10 16:47:27] 2026-01-10 21:46:57,076 | INFO     | all data control threads have been joined
[2026-01-10 16:47:27] 2026-01-10 21:46:57,164 | INFO     | all job control threads have been joined
[2026-01-10 16:47:27] 2026-01-10 21:46:57,418 | INFO     | [job] retrieve thread has finished
[2026-01-10 16:47:27] 2026-01-10 21:46:57,514 | INFO     | [job] job monitor thread has finished
[2026-01-10 16:47:27] 2026-01-10 21:46:57,551 | INFO     | [payload] control thread has finished
[2026-01-10 16:47:27] 2026-01-10 21:46:57,684 | INFO     | [job] validate thread has finished
[2026-01-10 16:47:27] 2026-01-10 21:46:57,917 | INFO     | [payload] validate_post thread has finished
[2026-01-10 16:47:27] 2026-01-10 21:46:58,051 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 16:47:27] 2026-01-10 21:46:58,076 | INFO     | [data] control thread has finished
[2026-01-10 16:47:27] 2026-01-10 21:46:58,083 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 16:47:27] 2026-01-10 21:46:58,170 | INFO     | [job] control thread has finished
[2026-01-10 16:47:27] 2026-01-10 21:46:58,224 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 16:47:27] 2026-01-10 21:46:58,259 | INFO     | [payload] failed_post thread has finished
[2026-01-10 16:47:27] 2026-01-10 21:46:58,432 | INFO     | [data] copytool_out thread has finished
[2026-01-10 16:47:27] 2026-01-10 21:46:58,499 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 16:47:27] 2026-01-10 21:46:58,670 | INFO     | [data] copytool_in thread has finished
[2026-01-10 16:47:27] 2026-01-10 21:46:58,776 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 16:47:27] 2026-01-10 21:46:58,950 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 16:47:27] 2026-01-10 21:46:59,950 | INFO     | [job] queue monitor thread has finished
[2026-01-10 16:47:27] 2026-01-10 21:47:02,060 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 16:47:27] 2026-01-10 21:47:10,404 | INFO     | [monitor] cgroup control has ended
[2026-01-10 16:47:27] 2026-01-10 21:47:11,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140230357911360)>', '<ExcThread(monitor, started 140230011123456)>']
[2026-01-10 16:47:27] 2026-01-10 21:47:16,347 | INFO     | all workflow threads have been joined
[2026-01-10 16:47:27] 2026-01-10 21:47:16,347 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 16:47:27] 2026-01-10 21:47:16,347 | INFO     | traces error code: 0
[2026-01-10 16:47:27] 2026-01-10 21:47:16,347 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 16:47:27] 2026-01-10 21:47:27,339 | INFO     | PID=3888034 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 16:47:27] 2026-01-10 21:47:27,339 | INFO     | .. there are 13 such processes running
[2026-01-10 16:47:27] 2026-01-10 21:47:27,340 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 16:47:27] 2026-01-10 21:47:27,340 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 16:47:27] 2026-01-10 21:47:27,340 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 16:47:27] 2026-01-10 21:47:27,340 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 16:47:27] 2026-01-10 21:47:27,340 | INFO     | [monitor] control thread has ended
[2026-01-10 16:47:27] 2026-01-10 21:47:27,542 [wrapper] ==== pilot stdout END ====
[2026-01-10 16:47:27] 2026-01-10 21:47:27,544 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 16:47:27] 2026-01-10 21:47:27,546 [wrapper] pilotpid: 3888034
[2026-01-10 16:47:27] 2026-01-10 21:47:27,548 [wrapper] Pilot exit status: 0
[2026-01-10 16:47:27] 2026-01-10 21:47:27,566 [wrapper] pandaids: 6962314823
[2026-01-10 16:47:27] 2026-01-10 21:47:27,653 [wrapper] cleanup supervisor_pilot 4187616 3888035
[2026-01-10 16:47:27] 2026-01-10 21:47:27,657 [wrapper] Test setup, not cleaning
[2026-01-10 16:47:27] 2026-01-10 21:47:27,670 [wrapper] apfmon messages muted
[2026-01-10 16:47:27] 2026-01-10 21:47:27,675 [wrapper] ==== wrapper stdout END ====
[2026-01-10 16:47:27] 2026-01-10 21:47:27,684 [wrapper] ==== wrapper stderr END ====
[2026-01-10 16:47:27]  *** Error codes and diagnostics ***
[2026-01-10 16:47:27]     "exeErrorCode": 0,
[2026-01-10 16:47:27]     "exeErrorDiag": "",
[2026-01-10 16:47:27]     "pilotErrorCode": 0,
[2026-01-10 16:47:27]     "pilotErrorDiag": "",
[2026-01-10 16:47:27]  *** Listing of results directory ***
[2026-01-10 16:47:27] total 436672
[2026-01-10 16:47:27] -rwx------. 1 boincer umatlas     36322 Jan  7 15:54 runpilot2-wrapper.sh
[2026-01-10 16:47:27] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 15:55 queuedata.json
[2026-01-10 16:47:27] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 15:55 pilot3.tar.gz
[2026-01-10 16:47:27] -rw-r--r--. 1 boincer umatlas       100 Jan 10 13:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 16:47:27] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 13:29 run_atlas
[2026-01-10 16:47:27] -rw-r--r--. 1 boincer umatlas       105 Jan 10 13:29 job.xml
[2026-01-10 16:47:27] -rw-r--r--. 2 boincer umatlas 223353965 Jan 10 13:29 EVNT.47898824._000288.pool.root.1
[2026-01-10 16:47:27] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 13:29 start_atlas.sh
[2026-01-10 16:47:27] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 13:29 shared
[2026-01-10 16:47:27] -rw-r--r--. 2 boincer umatlas    592397 Jan 10 13:29 input.tar.gz
[2026-01-10 16:47:27] -rw-r--r--. 1 boincer umatlas         0 Jan 10 13:29 boinc_lockfile
[2026-01-10 16:47:27] -rw-r--r--. 1 boincer umatlas      2516 Jan 10 13:29 pandaJob.out
[2026-01-10 16:47:27] -rw-------. 1 boincer umatlas        57 Jan 10 13:29 setup.sh.local
[2026-01-10 16:47:27] -rw-------. 1 boincer umatlas    989548 Jan 10 13:29 agis_schedconf.cvmfs.json
[2026-01-10 16:47:27] drwx------. 5 boincer umatlas      4096 Jan 10 13:29 pilot3
[2026-01-10 16:47:27] -rw-r--r--. 1 boincer umatlas      6955 Jan 10 16:38 init_data.xml
[2026-01-10 16:47:27] -rw-------. 1 boincer umatlas 215722718 Jan 10 16:46 HITS.47898826._011515.pool.root.1
[2026-01-10 16:47:27] -rw-r--r--. 1 boincer umatlas       531 Jan 10 16:46 boinc_task_state.xml
[2026-01-10 16:47:27] -rw-------. 1 boincer umatlas      1028 Jan 10 16:46 memory_monitor_summary.json
[2026-01-10 16:47:27] -rw-------. 1 boincer umatlas   1516240 Jan 10 16:46 agis_ddmendpoints.agis.ALL.json
[2026-01-10 16:47:27] -rw-------. 1 boincer umatlas    457365 Jan 10 16:46 log.47898826._011515.job.log.tgz.1
[2026-01-10 16:47:27] -rw-------. 1 boincer umatlas      7766 Jan 10 16:46 heartbeat.json
[2026-01-10 16:47:27] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 16:47 boinc_mmap_file
[2026-01-10 16:47:27] -rw-r--r--. 1 boincer umatlas        28 Jan 10 16:47 wrapper_checkpoint.txt
[2026-01-10 16:47:27] -rw-------. 1 boincer umatlas       823 Jan 10 16:47 pilotlog.txt
[2026-01-10 16:47:27] -rw-------. 1 boincer umatlas        95 Jan 10 16:47 pilot_heartbeat.json
[2026-01-10 16:47:27] -rw-------. 1 boincer umatlas   1628180 Jan 10 16:47 log.47898826._011515.job.log.1
[2026-01-10 16:47:27] -rw-------. 1 boincer umatlas       357 Jan 10 16:47 output.list
[2026-01-10 16:47:27] -rw-r--r--. 1 boincer umatlas       620 Jan 10 16:47 runtime_log
[2026-01-10 16:47:27] -rw-------. 1 boincer umatlas   2109440 Jan 10 16:47 result.tar.gz
[2026-01-10 16:47:27] -rw-r--r--. 1 boincer umatlas      9338 Jan 10 16:47 runtime_log.err
[2026-01-10 16:47:27] -rw-------. 1 boincer umatlas       655 Jan 10 16:47 EZIKDmbjpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDUdKDmkA0kdn.diag
[2026-01-10 16:47:27] -rw-r--r--. 1 boincer umatlas     11951 Jan 10 16:47 stderr.txt
[2026-01-10 16:47:27] HITS file was successfully produced:
[2026-01-10 16:47:27] -rw-------. 1 boincer umatlas 215722718 Jan 10 16:46 shared/HITS.pool.root.1
[2026-01-10 16:47:27]  *** Contents of shared directory: ***
[2026-01-10 16:47:27] total 431452
[2026-01-10 16:47:27] -rw-r--r--. 2 boincer umatlas 223353965 Jan 10 13:29 ATLAS.root_0
[2026-01-10 16:47:27] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 13:29 start_atlas.sh
[2026-01-10 16:47:27] -rw-r--r--. 2 boincer umatlas    592397 Jan 10 13:29 input.tar.gz
[2026-01-10 16:47:27] -rw-------. 1 boincer umatlas 215722718 Jan 10 16:46 HITS.pool.root.1
[2026-01-10 16:47:27] -rw-------. 1 boincer umatlas   2109440 Jan 10 16:47 result.tar.gz
16:47:29 (3884277): run_atlas exited; CPU time 42377.687989
16:47:29 (3884277): called boinc_finish(0)

</stderr_txt>
]]>

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