Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:36:28 (2484663): wrapper (7.7.26015): starting
12:36:28 (2484663): wrapper: running run_atlas (--nthreads 10)
[2026-01-10 12:36:28] Arguments: --nthreads 10
[2026-01-10 12:36:28] Threads: 10
[2026-01-10 12:36:28] Checking for CVMFS
[2026-01-10 12:36:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 12:36:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 12:36:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 12:36:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 12:36:29] 2.13.3.0 7433 24631 199276 154987 0 207 39307736 40960000 16054 16776704 0 69717659 99.683 60757343 39399 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 12:36:29] CVMFS is ok
[2026-01-10 12:36:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 12:36:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 12:36:29] Further information can be found at the LHC@home message board.
[2026-01-10 12:36:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 12:36:29] Checking for apptainer binary...
[2026-01-10 12:36:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 12:36:29] Running /usr/bin/apptainer --version
[2026-01-10 12:36:29] apptainer version 1.4.5-2.el9
[2026-01-10 12:36:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 12:36:30] c-212-16.aglt2.org
[2026-01-10 12:36:30] apptainer works
[2026-01-10 12:36:30] Set ATHENA_PROC_NUMBER=10
[2026-01-10 12:36:30] Set ATHENA_CORE_NUMBER=10
[2026-01-10 12:36:30] Starting ATLAS job with PandaID=6963187169
[2026-01-10 12:36:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 15:40:43]  *** The last 200 lines of the pilot log: ***
[2026-01-10 15:40:43] 2026-01-10 20:40:06,911 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 15:40:43] 2026-01-10 20:40:08,529 | INFO     | monitor loop #740: job 0:6963187169 is in state 'finished'
[2026-01-10 15:40:43] 2026-01-10 20:40:08,529 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 15:40:43] 2026-01-10 20:40:08,787 | INFO     | time since job start (10986s) is within the limit (349056.0s)
[2026-01-10 15:40:43] 2026-01-10 20:40:10,289 | INFO     | PID=2491182 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-10 15:40:43] 2026-01-10 20:40:10,290 | INFO     | .. there are 19 such processes running
[2026-01-10 15:40:43] 2026-01-10 20:40:10,914 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 15:40:43] 2026-01-10 20:40:10,926 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3376.9863124999993
[2026-01-10 15:40:43] 2026-01-10 20:40:10,939 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963187169/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 15:40:43] 2026-01-10 20:40:10,941 | INFO     | extracted standard info from prmon json
[2026-01-10 15:40:43] 2026-01-10 20:40:10,942 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 15:40:43] 2026-01-10 20:40:10,942 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 15:40:43] 2026-01-10 20:40:10,942 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 15:40:43] 2026-01-10 20:40:10,942 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 15:40:43] 2026-01-10 20:40:10,944 | INFO     | fitting pss+swap vs Time
[2026-01-10 15:40:43] 2026-01-10 20:40:10,944 | INFO     | sum of square deviations: 1778326664.5474904
[2026-01-10 15:40:43] 2026-01-10 20:40:10,945 | INFO     | sum of deviations: -8498729515.592185
[2026-01-10 15:40:43] 2026-01-10 20:40:10,945 | INFO     | mean x: 1768072112.0502794
[2026-01-10 15:40:43] 2026-01-10 20:40:10,945 | INFO     | mean y: 2651754.843575419
[2026-01-10 15:40:43] 2026-01-10 20:40:10,945 | INFO     | intersect: 8452374150.5884
[2026-01-10 15:40:43] 2026-01-10 20:40:10,946 | INFO     | chi2: 1.7871179097013998
[2026-01-10 15:40:43] 2026-01-10 20:40:10,946 | INFO     | sum of square deviations: 1633424367.034483
[2026-01-10 15:40:43] 2026-01-10 20:40:10,947 | INFO     | sum of deviations: -8606812074.241383
[2026-01-10 15:40:43] 2026-01-10 20:40:10,947 | INFO     | mean x: 1768071959.5517242
[2026-01-10 15:40:43] 2026-01-10 20:40:10,947 | INFO     | mean y: 2651641.1379310344
[2026-01-10 15:40:43] 2026-01-10 20:40:10,947 | INFO     | intersect: 9318946534.684202
[2026-01-10 15:40:43] 2026-01-10 20:40:10,947 | INFO     | chi2: 1.7843394929487846
[2026-01-10 15:40:43] 2026-01-10 20:40:10,947 | INFO     | current chi2=1.7843394929487846 (change=0.1554691348305879 %)
[2026-01-10 15:40:43] 2026-01-10 20:40:10,947 | INFO     | right removable region: 173
[2026-01-10 15:40:43] 2026-01-10 20:40:10,947 | INFO     | sum of square deviations: 1633418877.034483
[2026-01-10 15:40:43] 2026-01-10 20:40:10,948 | INFO     | sum of deviations: -36226535792.344826
[2026-01-10 15:40:43] 2026-01-10 20:40:10,948 | INFO     | mean x: 1768072264.5517242
[2026-01-10 15:40:43] 2026-01-10 20:40:10,948 | INFO     | mean y: 2680541.8160919542
[2026-01-10 15:40:43] 2026-01-10 20:40:10,948 | INFO     | intersect: 39215606311.06017
[2026-01-10 15:40:43] 2026-01-10 20:40:10,948 | INFO     | chi2: 0.3217129683415659
[2026-01-10 15:40:43] 2026-01-10 20:40:10,949 | INFO     | current chi2=0.3217129683415659 (change=81.99822369888739 %)
[2026-01-10 15:40:43] 2026-01-10 20:40:10,949 | INFO     | sum of square deviations: 1496614633.6212986
[2026-01-10 15:40:43] 2026-01-10 20:40:10,949 | INFO     | sum of deviations: -33647919485.497036
[2026-01-10 15:40:43] 2026-01-10 20:40:10,949 | INFO     | mean x: 1768072417.0473373
[2026-01-10 15:40:43] 2026-01-10 20:40:10,950 | INFO     | mean y: 2677593.5621301774
[2026-01-10 15:40:43] 2026-01-10 20:40:10,950 | INFO     | intersect: 39753697660.35557
[2026-01-10 15:40:43] 2026-01-10 20:40:10,950 | INFO     | chi2: 0.3021386351892072
[2026-01-10 15:40:43] 2026-01-10 20:40:10,950 | INFO     | current chi2=0.3021386351892072 (change=6.084409109544013 %)
[2026-01-10 15:40:43] 2026-01-10 20:40:10,950 | INFO     | left removable region: 20
[2026-01-10 15:40:43] 2026-01-10 20:40:10,950 | INFO     | sum of square deviations: 1110491953.5816956
[2026-01-10 15:40:43] 2026-01-10 20:40:10,951 | INFO     | sum of deviations: -18459941188.699352
[2026-01-10 15:40:43] 2026-01-10 20:40:10,951 | INFO     | mean x: 1768072539.0522876
[2026-01-10 15:40:43] 2026-01-10 20:40:10,951 | INFO     | mean y: 2659287.7124183006
[2026-01-10 15:40:43] 2026-01-10 20:40:10,951 | INFO     | intersect: 29393700783.321465
[2026-01-10 15:40:43] 2026-01-10 20:40:10,951 | INFO     | chi2: 0.24500449261689033
[2026-01-10 15:40:43] 2026-01-10 20:40:10,951 | INFO     | current memory leak: -16.62 B/s (using 153 data points, chi2=0.25)
[2026-01-10 15:40:43] 2026-01-10 20:40:10,951 | INFO     | could have reported an average CPU frequency of 3375 MHz (10 samples)
[2026-01-10 15:40:43] 2026-01-10 20:40:10,952 | INFO     | ..............................
[2026-01-10 15:40:43] 2026-01-10 20:40:10,952 | INFO     | . Timing measurements:
[2026-01-10 15:40:43] 2026-01-10 20:40:10,952 | INFO     | . get job = 0 s
[2026-01-10 15:40:43] 2026-01-10 20:40:10,952 | INFO     | . initial setup = 3 s
[2026-01-10 15:40:43] 2026-01-10 20:40:10,952 | INFO     | . payload setup = 17 s
[2026-01-10 15:40:43] 2026-01-10 20:40:10,952 | INFO     | . stage-in = 0 s
[2026-01-10 15:40:43] 2026-01-10 20:40:10,952 | INFO     | . payload execution = 10927 s
[2026-01-10 15:40:43] 2026-01-10 20:40:10,952 | INFO     | . stage-out = 1 s
[2026-01-10 15:40:43] 2026-01-10 20:40:10,952 | INFO     | . log creation = 0 s
[2026-01-10 15:40:43] 2026-01-10 20:40:10,952 | INFO     | ..............................
[2026-01-10 15:40:43] 2026-01-10 20:40:11,018 | INFO     | 
[2026-01-10 15:40:43] 2026-01-10 20:40:11,018 | INFO     | job summary report
[2026-01-10 15:40:43] 2026-01-10 20:40:11,018 | INFO     | --------------------------------------------------
[2026-01-10 15:40:43] 2026-01-10 20:40:11,018 | INFO     | PanDA job id: 6963187169
[2026-01-10 15:40:43] 2026-01-10 20:40:11,018 | INFO     | task id: 47898826
[2026-01-10 15:40:43] 2026-01-10 20:40:11,018 | INFO     | errors: (none)
[2026-01-10 15:40:43] 2026-01-10 20:40:11,018 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 15:40:43] 2026-01-10 20:40:11,018 | INFO     | pilot state: finished 
[2026-01-10 15:40:43] 2026-01-10 20:40:11,018 | INFO     | transexitcode: 0
[2026-01-10 15:40:43] 2026-01-10 20:40:11,019 | INFO     | exeerrorcode: 0
[2026-01-10 15:40:43] 2026-01-10 20:40:11,019 | INFO     | exeerrordiag: 
[2026-01-10 15:40:43] 2026-01-10 20:40:11,019 | INFO     | exitcode: 0
[2026-01-10 15:40:43] 2026-01-10 20:40:11,019 | INFO     | exitmsg: OK
[2026-01-10 15:40:43] 2026-01-10 20:40:11,019 | INFO     | cpuconsumptiontime: 40328 s
[2026-01-10 15:40:43] 2026-01-10 20:40:11,019 | INFO     | nevents: 400
[2026-01-10 15:40:43] 2026-01-10 20:40:11,019 | INFO     | neventsw: 0
[2026-01-10 15:40:43] 2026-01-10 20:40:11,019 | INFO     | pid: 2508084
[2026-01-10 15:40:43] 2026-01-10 20:40:11,019 | INFO     | pgrp: 2508084
[2026-01-10 15:40:43] 2026-01-10 20:40:11,019 | INFO     | corecount: 10
[2026-01-10 15:40:43] 2026-01-10 20:40:11,019 | INFO     | event service: False
[2026-01-10 15:40:43] 2026-01-10 20:40:11,019 | INFO     | sizes: {0: 2283143, 1: 2283999, 12: 2283999, 16: 2284289, 23: 2284317, 10948: 2313611, 10949: 2313738, 10951: 2322792, 10952: 2322848, 10956: 2323042}
[2026-01-10 15:40:43] 2026-01-10 20:40:11,019 | INFO     | --------------------------------------------------
[2026-01-10 15:40:43] 2026-01-10 20:40:11,019 | INFO     | 
[2026-01-10 15:40:43] 2026-01-10 20:40:11,019 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 15:40:43] 2026-01-10 20:40:11,040 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 15:40:43] 2026-01-10 20:40:11,040 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 15:40:43] 2026-01-10 20:40:11,041 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 15:40:43] 2026-01-10 20:40:11,041 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 15:40:43] 2026-01-10 20:40:11,041 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 15:40:43] 2026-01-10 20:40:11,041 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 15:40:43] 2026-01-10 20:40:11,041 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 15:40:43] 2026-01-10 20:40:11,041 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 15:40:43] 2026-01-10 20:40:11,041 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 15:40:43] 2026-01-10 20:40:11,041 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 15:40:43] 2026-01-10 20:40:11,041 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 15:40:43] 2026-01-10 20:40:11,041 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 15:40:43] 2026-01-10 20:40:11,041 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 15:40:43] 2026-01-10 20:40:11,041 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 15:40:43] 2026-01-10 20:40:11,041 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 15:40:43] 2026-01-10 20:40:11,042 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 15:40:43] 2026-01-10 20:40:11,042 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 15:40:43] 2026-01-10 20:40:11,042 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 15:40:43] 2026-01-10 20:40:11,042 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 15:40:43] 2026-01-10 20:40:11,042 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 15:40:43] 2026-01-10 20:40:11,042 | INFO     | job 6963187169 has completed (purged errors)
[2026-01-10 15:40:43] 2026-01-10 20:40:11,042 | INFO     | overall cleanup function is called
[2026-01-10 15:40:43] 2026-01-10 20:40:12,051 | INFO     | --- collectZombieJob: --- 10, [2508084]
[2026-01-10 15:40:43] 2026-01-10 20:40:12,051 | INFO     | zombie collector waiting for pid 2508084
[2026-01-10 15:40:43] 2026-01-10 20:40:12,051 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 15:40:43] 2026-01-10 20:40:12,051 | INFO     | collected zombie processes
[2026-01-10 15:40:43] 2026-01-10 20:40:12,051 | INFO     | will attempt to kill all subprocesses of pid=2508084
[2026-01-10 15:40:43] 2026-01-10 20:40:12,422 | INFO     | process IDs to be killed: [2508084] (in reverse order)
[2026-01-10 15:40:43] 2026-01-10 20:40:12,558 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 15:40:43] 2026-01-10 20:40:12,558 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 15:40:43] 2026-01-10 20:40:12,574 | INFO     | did not find any defunct processes belonging to 2508084
[2026-01-10 15:40:43] 2026-01-10 20:40:12,588 | INFO     | did not find any defunct processes belonging to 2508084
[2026-01-10 15:40:43] 2026-01-10 20:40:12,589 | INFO     | ready for new job
[2026-01-10 15:40:43] 2026-01-10 20:40:12,589 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 15:40:43] 2026-01-10 20:40:12,590 | INFO     | ***************************************
[2026-01-10 15:40:43] 2026-01-10 20:40:12,591 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 15:40:43] 2026-01-10 20:40:12,591 | INFO     | ***************************************
[2026-01-10 15:40:43] 2026-01-10 20:40:12,591 | INFO     | 
[2026-01-10 15:40:43] 2026-01-10 20:40:12,595 | INFO     | architecture information:
[2026-01-10 15:40:43] 2026-01-10 20:40:12,595 | INFO     | executing command: cat /etc/os-release
[2026-01-10 15:40:43] 2026-01-10 20:40:12,611 | INFO     | cat /etc/os-release:
[2026-01-10 15:40:43] NAME="CentOS Linux"
[2026-01-10 15:40:43] VERSION="7 (Core)"
[2026-01-10 15:40:43] ID="centos"
[2026-01-10 15:40:43] ID_LIKE="rhel fedora"
[2026-01-10 15:40:43] VERSION_ID="7"
[2026-01-10 15:40:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 15:40:43] ANSI_COLOR="0;31"
[2026-01-10 15:40:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 15:40:43] HOME_URL="https://www.centos.org/"
[2026-01-10 15:40:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 15:40:43] 
[2026-01-10 15:40:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 15:40:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 15:40:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 15:40:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 15:40:43] 
[2026-01-10 15:40:43] 2026-01-10 20:40:12,612 | INFO     | ***************************************
[2026-01-10 15:40:43] 2026-01-10 20:40:13,114 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 15:40:43] 2026-01-10 20:40:13,131 | INFO     | sufficient remaining disk space (129780154368 B)
[2026-01-10 15:40:43] 2026-01-10 20:40:13,132 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 15:40:43] 2026-01-10 20:40:13,132 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 15:40:43] 2026-01-10 20:40:13,132 | INFO     | update_server=False
[2026-01-10 15:40:43] 2026-01-10 20:40:13,132 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 15:40:43] 2026-01-10 20:40:13,132 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 15:40:43] 2026-01-10 20:40:13,275 | INFO     | all data control threads have been joined
[2026-01-10 15:40:43] 2026-01-10 20:40:13,303 | INFO     | all payload control threads have been joined
[2026-01-10 15:40:43] 2026-01-10 20:40:13,535 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 15:40:43] 2026-01-10 20:40:13,535 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 15:40:43] 2026-01-10 20:40:13,535 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 15:40:43] 2026-01-10 20:40:13,535 | INFO     | will abort loop
[2026-01-10 15:40:43] 2026-01-10 20:40:13,710 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 15:40:43] 2026-01-10 20:40:14,137 | INFO     | [job] retrieve thread has finished
[2026-01-10 15:40:43] 2026-01-10 20:40:14,181 | INFO     | [payload] failed_post thread has finished
[2026-01-10 15:40:43] 2026-01-10 20:40:14,280 | INFO     | [data] control thread has finished
[2026-01-10 15:40:43] 2026-01-10 20:40:14,308 | INFO     | [payload] control thread has finished
[2026-01-10 15:40:43] 2026-01-10 20:40:14,540 | INFO     | [job] job monitor thread has finished
[2026-01-10 15:40:43] 2026-01-10 20:40:14,546 | INFO     | [job] validate thread has finished
[2026-01-10 15:40:43] 2026-01-10 20:40:14,586 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 15:40:43] 2026-01-10 20:40:14,718 | INFO     | [data] copytool_in thread has finished
[2026-01-10 15:40:43] 2026-01-10 20:40:14,786 | INFO     | all job control threads have been joined
[2026-01-10 15:40:43] 2026-01-10 20:40:15,321 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 15:40:43] 2026-01-10 20:40:15,328 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 15:40:43] 2026-01-10 20:40:15,357 | INFO     | [payload] validate_post thread has finished
[2026-01-10 15:40:43] 2026-01-10 20:40:15,629 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 15:40:43] 2026-01-10 20:40:15,717 | INFO     | [data] copytool_out thread has finished
[2026-01-10 15:40:43] 2026-01-10 20:40:15,791 | INFO     | [job] control thread has finished
[2026-01-10 15:40:43] 2026-01-10 20:40:16,025 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 15:40:43] 2026-01-10 20:40:17,031 | INFO     | [job] queue monitor thread has finished
[2026-01-10 15:40:43] 2026-01-10 20:40:17,139 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 15:40:43] 2026-01-10 20:40:21,287 | INFO     | [monitor] cgroup control has ended
[2026-01-10 15:40:43] 2026-01-10 20:40:23,111 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140305598142272)>', '<ExcThread(monitor, started 140305240160000)>']
[2026-01-10 15:40:43] 2026-01-10 20:40:28,140 | INFO     | all workflow threads have been joined
[2026-01-10 15:40:43] 2026-01-10 20:40:28,144 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 15:40:43] 2026-01-10 20:40:28,144 | INFO     | traces error code: 0
[2026-01-10 15:40:43] 2026-01-10 20:40:28,144 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 15:40:43] 2026-01-10 20:40:42,745 | INFO     | PID=2491182 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 15:40:43] 2026-01-10 20:40:42,745 | INFO     | .. there are 19 such processes running
[2026-01-10 15:40:43] 2026-01-10 20:40:42,746 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 15:40:43] 2026-01-10 20:40:42,746 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 15:40:43] 2026-01-10 20:40:42,746 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 15:40:43] 2026-01-10 20:40:42,746 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 15:40:43] 2026-01-10 20:40:42,746 | CRITICAL | thread 'MainThread' is not alive
[2026-01-10 15:40:43] 2026-01-10 20:40:42,746 | INFO     | [monitor] control thread has ended
[2026-01-10 15:40:43] 2026-01-10 20:40:42,855 [wrapper] ==== pilot stdout END ====
[2026-01-10 15:40:43] 2026-01-10 20:40:42,859 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 15:40:43] 2026-01-10 20:40:42,861 [wrapper] pilotpid: 2491182
[2026-01-10 15:40:43] 2026-01-10 20:40:42,864 [wrapper] Pilot exit status: 0
[2026-01-10 15:40:43] 2026-01-10 20:40:42,877 [wrapper] pandaids: 6963187169
[2026-01-10 15:40:43] 2026-01-10 20:40:42,970 [wrapper] cleanup supervisor_pilot 3060613 2491183
[2026-01-10 15:40:43] 2026-01-10 20:40:42,974 [wrapper] Test setup, not cleaning
[2026-01-10 15:40:43] 2026-01-10 20:40:42,977 [wrapper] apfmon messages muted
[2026-01-10 15:40:43] 2026-01-10 20:40:42,979 [wrapper] ==== wrapper stdout END ====
[2026-01-10 15:40:43] 2026-01-10 20:40:42,982 [wrapper] ==== wrapper stderr END ====
[2026-01-10 15:40:43]  *** Error codes and diagnostics ***
[2026-01-10 15:40:43]     "exeErrorCode": 0,
[2026-01-10 15:40:43]     "exeErrorDiag": "",
[2026-01-10 15:40:43]     "pilotErrorCode": 0,
[2026-01-10 15:40:43]     "pilotErrorDiag": "",
[2026-01-10 15:40:43]  *** Listing of results directory ***
[2026-01-10 15:40:43] total 441432
[2026-01-10 15:40:43] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-10 15:40:43] -rwx------. 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-10 15:40:43] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:28 queuedata.json
[2026-01-10 15:40:43] -rw-r--r--. 1 boincer umatlas       100 Jan 10 12:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 15:40:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 12:36 run_atlas
[2026-01-10 15:40:43] -rw-r--r--. 1 boincer umatlas       105 Jan 10 12:36 job.xml
[2026-01-10 15:40:43] -rw-r--r--. 2 boincer umatlas 222232026 Jan 10 12:36 EVNT.47898824._001420.pool.root.1
[2026-01-10 15:40:43] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 12:36 start_atlas.sh
[2026-01-10 15:40:43] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 12:36 shared
[2026-01-10 15:40:43] -rw-r--r--. 2 boincer umatlas    592398 Jan 10 12:36 input.tar.gz
[2026-01-10 15:40:43] -rw-r--r--. 1 boincer umatlas         0 Jan 10 12:36 boinc_lockfile
[2026-01-10 15:40:43] -rw-r--r--. 1 boincer umatlas      2520 Jan 10 12:36 pandaJob.out
[2026-01-10 15:40:43] -rw-------. 1 boincer umatlas        57 Jan 10 12:36 setup.sh.local
[2026-01-10 15:40:43] -rw-------. 1 boincer umatlas    989548 Jan 10 12:37 agis_schedconf.cvmfs.json
[2026-01-10 15:40:43] drwx------. 5 boincer umatlas      4096 Jan 10 12:37 pilot3
[2026-01-10 15:40:43] -rw-r--r--. 1 boincer umatlas      6956 Jan 10 15:37 init_data.xml
[2026-01-10 15:40:43] -rw-------. 1 boincer umatlas 221993076 Jan 10 15:39 HITS.47898826._037043.pool.root.1
[2026-01-10 15:40:43] -rw-r--r--. 1 boincer umatlas       530 Jan 10 15:39 boinc_task_state.xml
[2026-01-10 15:40:43] -rw-------. 1 boincer umatlas      1033 Jan 10 15:40 memory_monitor_summary.json
[2026-01-10 15:40:43] -rw-------. 1 boincer umatlas   1516240 Jan 10 15:40 agis_ddmendpoints.agis.ALL.json
[2026-01-10 15:40:43] -rw-------. 1 boincer umatlas    451676 Jan 10 15:40 log.47898826._037043.job.log.tgz.1
[2026-01-10 15:40:43] -rw-------. 1 boincer umatlas      7779 Jan 10 15:40 heartbeat.json
[2026-01-10 15:40:43] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 15:40 boinc_mmap_file
[2026-01-10 15:40:43] -rw-r--r--. 1 boincer umatlas        28 Jan 10 15:40 wrapper_checkpoint.txt
[2026-01-10 15:40:43] -rw-------. 1 boincer umatlas       893 Jan 10 15:40 pilotlog.txt
[2026-01-10 15:40:43] -rw-------. 1 boincer umatlas        95 Jan 10 15:40 pilot_heartbeat.json
[2026-01-10 15:40:43] -rw-------. 1 boincer umatlas   1490294 Jan 10 15:40 log.47898826._037043.job.log.1
[2026-01-10 15:40:43] -rw-------. 1 boincer umatlas       357 Jan 10 15:40 output.list
[2026-01-10 15:40:43] -rw-r--r--. 1 boincer umatlas       620 Jan 10 15:40 runtime_log
[2026-01-10 15:40:43] -rw-------. 1 boincer umatlas   1966080 Jan 10 15:40 result.tar.gz
[2026-01-10 15:40:43] -rw-r--r--. 1 boincer umatlas      9345 Jan 10 15:40 runtime_log.err
[2026-01-10 15:40:43] -rw-------. 1 boincer umatlas       656 Jan 10 15:40 B8RKDmjEJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDms4gKDm0Hj1Dn.diag
[2026-01-10 15:40:43] -rw-r--r--. 1 boincer umatlas     21564 Jan 10 15:40 stderr.txt
[2026-01-10 15:40:43] HITS file was successfully produced:
[2026-01-10 15:40:43] -rw-------. 1 boincer umatlas 221993076 Jan 10 15:39 shared/HITS.pool.root.1
[2026-01-10 15:40:43]  *** Contents of shared directory: ***
[2026-01-10 15:40:43] total 436340
[2026-01-10 15:40:43] -rw-r--r--. 2 boincer umatlas 222232026 Jan 10 12:36 ATLAS.root_0
[2026-01-10 15:40:43] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 12:36 start_atlas.sh
[2026-01-10 15:40:43] -rw-r--r--. 2 boincer umatlas    592398 Jan 10 12:36 input.tar.gz
[2026-01-10 15:40:43] -rw-------. 1 boincer umatlas 221993076 Jan 10 15:39 HITS.pool.root.1
[2026-01-10 15:40:43] -rw-------. 1 boincer umatlas   1966080 Jan 10 15:40 result.tar.gz
15:40:44 (2484663): run_atlas exited; CPU time 40672.109600
15:40:44 (2484663): called boinc_finish(0)

</stderr_txt>
]]>

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