Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:49:51 (1459876): wrapper (7.7.26015): starting
10:49:51 (1459876): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 10:49:51] Arguments: --nthreads 8
[2026-01-10 10:49:51] Threads: 8
[2026-01-10 10:49:51] Checking for CVMFS
[2026-01-10 10:49:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 10:49:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 10:49:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 10:49:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 10:49:54] 2.13.3.0 290515 97809 561136 154984 1 64 27467303 40960001 7066 16776704 0 303510038 99.612 313046306 39328 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 10:49:54] CVMFS is ok
[2026-01-10 10:49:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 10:49:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 10:49:54] Further information can be found at the LHC@home message board.
[2026-01-10 10:49:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 10:49:54] Checking for apptainer binary...
[2026-01-10 10:49:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 10:49:54] Running /usr/bin/apptainer --version
[2026-01-10 10:49:54] apptainer version 1.4.5-2.el9
[2026-01-10 10:49:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 10:49:55] c6-5-37-4.aglt2.org
[2026-01-10 10:49:55] apptainer works
[2026-01-10 10:49:55] Set ATHENA_PROC_NUMBER=8
[2026-01-10 10:49:55] Set ATHENA_CORE_NUMBER=8
[2026-01-10 10:49:56] Starting ATLAS job with PandaID=6963156041
[2026-01-10 10:49:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 21:12:18]  *** The last 200 lines of the pilot log: ***
[2026-01-10 21:12:18] 2026-01-11 02:11:15,194 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 21:12:18] 2026-01-11 02:11:15,203 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3044.1177142857146
[2026-01-10 21:12:18] 2026-01-11 02:11:15,236 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963156041/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 21:12:18] 2026-01-11 02:11:15,237 | INFO     | extracted standard info from prmon json
[2026-01-10 21:12:18] 2026-01-11 02:11:15,237 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 21:12:18] 2026-01-11 02:11:15,237 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 21:12:18] 2026-01-11 02:11:15,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 21:12:18] 2026-01-11 02:11:15,238 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 21:12:18] 2026-01-11 02:11:15,275 | INFO     | fitting pss+swap vs Time
[2026-01-10 21:12:18] 2026-01-11 02:11:15,276 | INFO     | sum of square deviations: 69008318162.0924
[2026-01-10 21:12:18] 2026-01-11 02:11:15,300 | INFO     | sum of deviations: 153522345166.1451
[2026-01-10 21:12:18] 2026-01-11 02:11:15,301 | INFO     | mean x: 1768078952.3894389
[2026-01-10 21:12:18] 2026-01-11 02:11:15,301 | INFO     | mean y: 2532808.397689769
[2026-01-10 21:12:18] 2026-01-11 02:11:15,301 | INFO     | intersect: -3930900644.829615
[2026-01-10 21:12:18] 2026-01-11 02:11:15,302 | INFO     | chi2: 4.428124459988028
[2026-01-10 21:12:18] 2026-01-11 02:11:15,302 | INFO     | sum of square deviations: 67314358499.18491
[2026-01-10 21:12:18] 2026-01-11 02:11:15,317 | INFO     | monitor loop #2190: job 0:6963156041 is in state 'finished'
[2026-01-10 21:12:18] 2026-01-11 02:11:15,317 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 21:12:18] 2026-01-11 02:11:15,340 | INFO     | sum of deviations: 230727415056.67365
[2026-01-10 21:12:18] 2026-01-11 02:11:15,340 | INFO     | mean x: 1768078799.8935108
[2026-01-10 21:12:18] 2026-01-11 02:11:15,340 | INFO     | mean y: 2539723.5574043263
[2026-01-10 21:12:18] 2026-01-11 02:11:15,340 | INFO     | intersect: -6057746078.9267
[2026-01-10 21:12:18] 2026-01-11 02:11:15,341 | INFO     | chi2: 3.022401388576012
[2026-01-10 21:12:18] 2026-01-11 02:11:15,341 | INFO     | current chi2=3.022401388576012 (change=31.74533787642943 %)
[2026-01-10 21:12:18] 2026-01-11 02:11:15,342 | INFO     | sum of square deviations: 65648352848.75666
[2026-01-10 21:12:18] 2026-01-11 02:11:15,374 | INFO     | sum of deviations: 228663563946.5068
[2026-01-10 21:12:18] 2026-01-11 02:11:15,374 | INFO     | mean x: 1768078647.397651
[2026-01-10 21:12:18] 2026-01-11 02:11:15,374 | INFO     | mean y: 2539534.647651007
[2026-01-10 21:12:18] 2026-01-11 02:11:15,374 | INFO     | intersect: -6155957172.544648
[2026-01-10 21:12:18] 2026-01-11 02:11:15,375 | INFO     | chi2: 3.022640574863418
[2026-01-10 21:12:18] 2026-01-11 02:11:15,375 | INFO     | current chi2=3.022640574863418 (change=-0.007913783004140858 %)
[2026-01-10 21:12:18] 2026-01-11 02:11:15,375 | INFO     | right removable region: 595
[2026-01-10 21:12:18] 2026-01-11 02:11:15,380 | INFO     | sum of square deviations: 67314103395.60412
[2026-01-10 21:12:18] 2026-01-11 02:11:15,397 | INFO     | sum of deviations: -12840113512.188042
[2026-01-10 21:12:18] 2026-01-11 02:11:15,397 | INFO     | mean x: 1768079104.8968387
[2026-01-10 21:12:18] 2026-01-11 02:11:15,413 | INFO     | mean y: 2547766.690515807
[2026-01-10 21:12:18] 2026-01-11 02:11:15,413 | INFO     | intersect: 339807497.7157053
[2026-01-10 21:12:18] 2026-01-11 02:11:15,414 | INFO     | chi2: 1.7143011584999828
[2026-01-10 21:12:18] 2026-01-11 02:11:15,414 | INFO     | current chi2=1.7143011584999828 (change=61.28606650535252 %)
[2026-01-10 21:12:18] 2026-01-11 02:11:15,415 | INFO     | sum of square deviations: 65647989288.7566
[2026-01-10 21:12:18] 2026-01-11 02:11:15,441 | INFO     | sum of deviations: -53682024243.85907
[2026-01-10 21:12:18] 2026-01-11 02:11:15,442 | INFO     | mean x: 1768079257.397651
[2026-01-10 21:12:18] 2026-01-11 02:11:15,442 | INFO     | mean y: 2551496.100671141
[2026-01-10 21:12:18] 2026-01-11 02:11:15,442 | INFO     | intersect: 1448354704.8356686
[2026-01-10 21:12:18] 2026-01-11 02:11:15,442 | INFO     | chi2: 1.5088163681989961
[2026-01-10 21:12:18] 2026-01-11 02:11:15,443 | INFO     | current chi2=1.5088163681989961 (change=11.986504779637801 %)
[2026-01-10 21:12:18] 2026-01-11 02:11:15,443 | INFO     | left removable region: 20
[2026-01-10 21:12:18] 2026-01-11 02:11:15,443 | INFO     | sum of square deviations: 58950427177.99305
[2026-01-10 21:12:18] 2026-01-11 02:11:15,469 | INFO     | sum of deviations: 36254081857.21558
[2026-01-10 21:12:18] 2026-01-11 02:11:15,469 | INFO     | mean x: 1768079226.9165218
[2026-01-10 21:12:18] 2026-01-11 02:11:15,469 | INFO     | mean y: 2557388.587826087
[2026-01-10 21:12:18] 2026-01-11 02:11:15,469 | INFO     | intersect: -1084798413.4173443
[2026-01-10 21:12:18] 2026-01-11 02:11:15,470 | INFO     | chi2: 0.031530023187321086
[2026-01-10 21:12:18] 2026-01-11 02:11:15,470 | INFO     | current memory leak: 0.61 B/s (using 575 data points, chi2=0.03)
[2026-01-10 21:12:18] 2026-01-11 02:11:15,470 | INFO     | could have reported an average CPU frequency of 3045 MHz (24 samples)
[2026-01-10 21:12:18] 2026-01-11 02:11:15,471 | INFO     | ..............................
[2026-01-10 21:12:18] 2026-01-11 02:11:15,471 | INFO     | . Timing measurements:
[2026-01-10 21:12:18] 2026-01-11 02:11:15,471 | INFO     | . get job = 1 s
[2026-01-10 21:12:18] 2026-01-11 02:11:15,471 | INFO     | . initial setup = 12 s
[2026-01-10 21:12:18] 2026-01-11 02:11:15,471 | INFO     | . payload setup = 59 s
[2026-01-10 21:12:18] 2026-01-11 02:11:15,471 | INFO     | . stage-in = 0 s
[2026-01-10 21:12:18] 2026-01-11 02:11:15,471 | INFO     | . payload execution = 36964 s
[2026-01-10 21:12:18] 2026-01-11 02:11:15,475 | INFO     | . stage-out = 4 s
[2026-01-10 21:12:18] 2026-01-11 02:11:15,475 | INFO     | . log creation = 1 s
[2026-01-10 21:12:18] 2026-01-11 02:11:15,475 | INFO     | ..............................
[2026-01-10 21:12:18] 2026-01-11 02:11:15,780 | INFO     | 
[2026-01-10 21:12:18] 2026-01-11 02:11:15,780 | INFO     | job summary report
[2026-01-10 21:12:18] 2026-01-11 02:11:15,780 | INFO     | --------------------------------------------------
[2026-01-10 21:12:18] 2026-01-11 02:11:15,780 | INFO     | PanDA job id: 6963156041
[2026-01-10 21:12:18] 2026-01-11 02:11:15,780 | INFO     | task id: 47898826
[2026-01-10 21:12:18] 2026-01-11 02:11:15,780 | INFO     | errors: (none)
[2026-01-10 21:12:18] 2026-01-11 02:11:15,780 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 21:12:18] 2026-01-11 02:11:15,780 | INFO     | pilot state: finished 
[2026-01-10 21:12:18] 2026-01-11 02:11:15,780 | INFO     | transexitcode: 0
[2026-01-10 21:12:18] 2026-01-11 02:11:15,781 | INFO     | exeerrorcode: 0
[2026-01-10 21:12:18] 2026-01-11 02:11:15,781 | INFO     | exeerrordiag: 
[2026-01-10 21:12:18] 2026-01-11 02:11:15,781 | INFO     | exitcode: 0
[2026-01-10 21:12:18] 2026-01-11 02:11:15,781 | INFO     | exitmsg: OK
[2026-01-10 21:12:18] 2026-01-11 02:11:15,781 | INFO     | cpuconsumptiontime: 56682 s
[2026-01-10 21:12:18] 2026-01-11 02:11:15,781 | INFO     | nevents: 400
[2026-01-10 21:12:18] 2026-01-11 02:11:15,781 | INFO     | neventsw: 0
[2026-01-10 21:12:18] 2026-01-11 02:11:15,781 | INFO     | pid: 1477617
[2026-01-10 21:12:18] 2026-01-11 02:11:15,781 | INFO     | pgrp: 1477617
[2026-01-10 21:12:18] 2026-01-11 02:11:15,781 | INFO     | corecount: 8
[2026-01-10 21:12:18] 2026-01-11 02:11:15,781 | INFO     | event service: False
[2026-01-10 21:12:18] 2026-01-11 02:11:15,781 | INFO     | sizes: {0: 2283141, 1: 2283742, 2: 2283826, 3: 2283854, 4: 2284053, 5: 2284081, 6: 2284265, 17: 2284293, 29: 2284321, 40: 2284349, 42: 2284639, 52: 2284975, 37028:
[2026-01-10 21:12:18] 2026-01-11 02:11:15,781 | INFO     | --------------------------------------------------
[2026-01-10 21:12:18] 2026-01-11 02:11:15,781 | INFO     | 
[2026-01-10 21:12:18] 2026-01-11 02:11:15,782 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 21:12:18] 2026-01-11 02:11:15,985 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 21:12:18] 2026-01-11 02:11:15,986 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 21:12:18] 2026-01-11 02:11:15,986 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 21:12:18] 2026-01-11 02:11:15,986 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 21:12:18] 2026-01-11 02:11:15,986 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 21:12:18] 2026-01-11 02:11:15,986 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 21:12:18] 2026-01-11 02:11:15,986 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 21:12:18] 2026-01-11 02:11:15,986 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 21:12:18] 2026-01-11 02:11:15,986 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 21:12:18] 2026-01-11 02:11:15,986 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 21:12:18] 2026-01-11 02:11:16,004 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 21:12:18] 2026-01-11 02:11:16,004 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 21:12:18] 2026-01-11 02:11:16,004 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 21:12:18] 2026-01-11 02:11:16,005 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 21:12:18] 2026-01-11 02:11:16,005 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 21:12:18] 2026-01-11 02:11:16,005 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 21:12:18] 2026-01-11 02:11:16,005 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 21:12:18] 2026-01-11 02:11:16,005 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 21:12:18] 2026-01-11 02:11:16,005 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 21:12:18] 2026-01-11 02:11:16,005 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 21:12:18] 2026-01-11 02:11:16,005 | INFO     | job 6963156041 has completed (purged errors)
[2026-01-10 21:12:18] 2026-01-11 02:11:16,005 | INFO     | overall cleanup function is called
[2026-01-10 21:12:18] 2026-01-11 02:11:17,050 | INFO     | --- collectZombieJob: --- 10, [1477617]
[2026-01-10 21:12:18] 2026-01-11 02:11:17,050 | INFO     | zombie collector waiting for pid 1477617
[2026-01-10 21:12:18] 2026-01-11 02:11:17,050 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 21:12:18] 2026-01-11 02:11:17,050 | INFO     | collected zombie processes
[2026-01-10 21:12:18] 2026-01-11 02:11:17,051 | INFO     | will attempt to kill all subprocesses of pid=1477617
[2026-01-10 21:12:18] 2026-01-11 02:11:17,854 | INFO     | process IDs to be killed: [1477617] (in reverse order)
[2026-01-10 21:12:18] 2026-01-11 02:11:18,247 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 21:12:18] 2026-01-11 02:11:18,247 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 21:12:18] 2026-01-11 02:11:18,288 | INFO     | did not find any defunct processes belonging to 1477617
[2026-01-10 21:12:18] 2026-01-11 02:11:18,326 | INFO     | did not find any defunct processes belonging to 1477617
[2026-01-10 21:12:18] 2026-01-11 02:11:18,327 | INFO     | ready for new job
[2026-01-10 21:12:18] 2026-01-11 02:11:18,327 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 21:12:18] 2026-01-11 02:11:18,346 | INFO     | ***************************************
[2026-01-10 21:12:18] 2026-01-11 02:11:18,346 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 21:12:18] 2026-01-11 02:11:18,346 | INFO     | ***************************************
[2026-01-10 21:12:18] 2026-01-11 02:11:18,347 | INFO     | 
[2026-01-10 21:12:18] 2026-01-11 02:11:18,350 | INFO     | architecture information:
[2026-01-10 21:12:18] 2026-01-11 02:11:18,370 | INFO     | executing command: cat /etc/os-release
[2026-01-10 21:12:18] 2026-01-11 02:11:18,467 | INFO     | cat /etc/os-release:
[2026-01-10 21:12:18] NAME="CentOS Linux"
[2026-01-10 21:12:18] VERSION="7 (Core)"
[2026-01-10 21:12:18] ID="centos"
[2026-01-10 21:12:18] ID_LIKE="rhel fedora"
[2026-01-10 21:12:18] VERSION_ID="7"
[2026-01-10 21:12:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 21:12:18] ANSI_COLOR="0;31"
[2026-01-10 21:12:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 21:12:18] HOME_URL="https://www.centos.org/"
[2026-01-10 21:12:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 21:12:18] 
[2026-01-10 21:12:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 21:12:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 21:12:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 21:12:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 21:12:18] 
[2026-01-10 21:12:18] 2026-01-11 02:11:18,468 | INFO     | ***************************************
[2026-01-10 21:12:18] 2026-01-11 02:11:18,971 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 21:12:18] 2026-01-11 02:11:19,066 | INFO     | sufficient remaining disk space (75014078464 B)
[2026-01-10 21:12:18] 2026-01-11 02:11:19,066 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 21:12:18] 2026-01-11 02:11:19,066 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 21:12:18] 2026-01-11 02:11:19,066 | INFO     | update_server=False
[2026-01-10 21:12:18] 2026-01-11 02:11:19,066 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 21:12:18] 2026-01-11 02:11:19,067 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:12:18] 2026-01-11 02:11:19,067 | INFO     | aborting loop
[2026-01-10 21:12:18] 2026-01-11 02:11:19,508 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 21:12:18] 2026-01-11 02:11:19,709 | INFO     | all data control threads have been joined
[2026-01-10 21:12:18] 2026-01-11 02:11:20,063 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 21:12:18] 2026-01-11 02:11:20,072 | INFO     | [job] retrieve thread has finished
[2026-01-10 21:12:18] 2026-01-11 02:11:20,073 | INFO     | [job] job monitor thread has finished
[2026-01-10 21:12:18] 2026-01-11 02:11:20,191 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 21:12:18] 2026-01-11 02:11:20,270 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 21:12:18] 2026-01-11 02:11:20,274 | INFO     | all payload control threads have been joined
[2026-01-10 21:12:18] 2026-01-11 02:11:20,604 | INFO     | [payload] failed_post thread has finished
[2026-01-10 21:12:18] 2026-01-11 02:11:20,665 | INFO     | all job control threads have been joined
[2026-01-10 21:12:18] 2026-01-11 02:11:20,677 | INFO     | [payload] validate_post thread has finished
[2026-01-10 21:12:18] 2026-01-11 02:11:20,700 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 21:12:18] 2026-01-11 02:11:20,715 | INFO     | [data] control thread has finished
[2026-01-10 21:12:18] 2026-01-11 02:11:20,734 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 21:12:18] 2026-01-11 02:11:20,807 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:12:18] 2026-01-11 02:11:20,902 | INFO     | [job] validate thread has finished
[2026-01-10 21:12:18] 2026-01-11 02:11:20,930 | INFO     | [data] copytool_in thread has finished
[2026-01-10 21:12:18] 2026-01-11 02:11:21,280 | INFO     | [payload] control thread has finished
[2026-01-10 21:12:18] 2026-01-11 02:11:21,515 | INFO     | [data] copytool_out thread has finished
[2026-01-10 21:12:18] 2026-01-11 02:11:21,671 | INFO     | [job] control thread has finished
[2026-01-10 21:12:18] 2026-01-11 02:11:21,813 | INFO     | [job] queue monitor thread has finished
[2026-01-10 21:12:18] 2026-01-11 02:11:24,072 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 21:12:18] 2026-01-11 02:11:47,606 | INFO     | PID=1467531 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 21:12:18] 2026-01-11 02:11:47,607 | INFO     | .. there are 9 such processes running
[2026-01-10 21:12:18] 2026-01-11 02:11:47,608 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 21:12:18] 2026-01-11 02:11:47,608 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 21:12:18] 2026-01-11 02:11:47,608 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 21:12:18] 2026-01-11 02:11:50,415 | INFO     | [monitor] cgroup control has ended
[2026-01-10 21:12:18] 2026-01-11 02:11:52,512 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140211092887360)>', '<ExcThread(monitor, started 140210440480512)>']
[2026-01-10 21:12:18] 2026-01-11 02:11:52,637 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 21:12:18] 2026-01-11 02:11:52,637 | INFO     | [monitor] control thread has ended
[2026-01-10 21:12:18] 2026-01-11 02:11:57,538 | INFO     | all workflow threads have been joined
[2026-01-10 21:12:18] 2026-01-11 02:11:57,538 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 21:12:18] 2026-01-11 02:11:57,539 | INFO     | traces error code: 0
[2026-01-10 21:12:18] 2026-01-11 02:11:57,539 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 21:12:18] 2026-01-11 02:11:58,098 [wrapper] ==== pilot stdout END ====
[2026-01-10 21:12:18] 2026-01-11 02:11:58,109 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 21:12:18] 2026-01-11 02:11:58,134 [wrapper] pilotpid: 1467531
[2026-01-10 21:12:18] 2026-01-11 02:11:58,175 [wrapper] Pilot exit status: 0
[2026-01-10 21:12:18] 2026-01-11 02:11:58,495 [wrapper] pandaids: 6963156041
[2026-01-10 21:12:18] 2026-01-11 02:11:58,977 [wrapper] cleanup supervisor_pilot 2624947 1467532
[2026-01-10 21:12:18] 2026-01-11 02:11:59,020 [wrapper] Test setup, not cleaning
[2026-01-10 21:12:18] 2026-01-11 02:11:59,063 [wrapper] apfmon messages muted
[2026-01-10 21:12:18] 2026-01-11 02:11:59,132 [wrapper] ==== wrapper stdout END ====
[2026-01-10 21:12:18] 2026-01-11 02:11:59,181 [wrapper] ==== wrapper stderr END ====
[2026-01-10 21:12:18]  *** Error codes and diagnostics ***
[2026-01-10 21:12:18]     "exeErrorCode": 0,
[2026-01-10 21:12:18]     "exeErrorDiag": "",
[2026-01-10 21:12:18]     "pilotErrorCode": 0,
[2026-01-10 21:12:18]     "pilotErrorDiag": "",
[2026-01-10 21:12:18]  *** Listing of results directory ***
[2026-01-10 21:12:18] total 452992
[2026-01-10 21:12:18] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 14:06 pilot3.tar.gz
[2026-01-10 21:12:18] -rwx------. 1 boincer umatlas     36322 Jan  8 14:10 runpilot2-wrapper.sh
[2026-01-10 21:12:18] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 14:11 queuedata.json
[2026-01-10 21:12:18] -rw-r--r--. 1 boincer umatlas       100 Jan 10 10:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 21:12:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 10:49 run_atlas
[2026-01-10 21:12:18] -rw-r--r--. 1 boincer umatlas       105 Jan 10 10:49 job.xml
[2026-01-10 21:12:18] -rw-r--r--. 2 boincer umatlas 222966428 Jan 10 10:49 EVNT.47898824._000890.pool.root.1
[2026-01-10 21:12:18] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 10:49 start_atlas.sh
[2026-01-10 21:12:18] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 10:49 shared
[2026-01-10 21:12:18] -rw-r--r--. 2 boincer umatlas    592391 Jan 10 10:49 input.tar.gz
[2026-01-10 21:12:18] -rw-r--r--. 1 boincer umatlas         0 Jan 10 10:49 boinc_lockfile
[2026-01-10 21:12:18] -rw-r--r--. 1 boincer umatlas      2519 Jan 10 10:49 pandaJob.out
[2026-01-10 21:12:18] -rw-------. 1 boincer umatlas        57 Jan 10 10:49 setup.sh.local
[2026-01-10 21:12:18] -rw-------. 1 boincer umatlas    989556 Jan 10 10:51 agis_schedconf.cvmfs.json
[2026-01-10 21:12:18] drwx------. 5 boincer umatlas      4096 Jan 10 10:51 pilot3
[2026-01-10 21:12:18] -rw-------. 1 boincer umatlas 226475510 Jan 10 21:08 HITS.47898826._031262.pool.root.1
[2026-01-10 21:12:18] -rw-r--r--. 1 boincer umatlas       531 Jan 10 21:08 boinc_task_state.xml
[2026-01-10 21:12:18] -rw-------. 1 boincer umatlas      1037 Jan 10 21:10 memory_monitor_summary.json
[2026-01-10 21:12:18] -rw-------. 1 boincer umatlas   1516240 Jan 10 21:10 agis_ddmendpoints.agis.ALL.json
[2026-01-10 21:12:18] -rw-------. 1 boincer umatlas    732831 Jan 10 21:10 log.47898826._031262.job.log.tgz.1
[2026-01-10 21:12:18] -rw-r--r--. 1 boincer umatlas      6841 Jan 10 21:10 init_data.xml
[2026-01-10 21:12:18] -rw-------. 1 boincer umatlas      7820 Jan 10 21:11 heartbeat.json
[2026-01-10 21:12:18] -rw-------. 1 boincer umatlas        95 Jan 10 21:11 pilot_heartbeat.json
[2026-01-10 21:12:18] -rw-------. 1 boincer umatlas      4823 Jan 10 21:11 pilotlog.txt
[2026-01-10 21:12:18] -rw-------. 1 boincer umatlas   4521234 Jan 10 21:11 log.47898826._031262.job.log.1
[2026-01-10 21:12:18] -rw-------. 1 boincer umatlas       357 Jan 10 21:11 output.list
[2026-01-10 21:12:18] -rw-r--r--. 1 boincer umatlas       620 Jan 10 21:11 runtime_log
[2026-01-10 21:12:18] -rw-------. 1 boincer umatlas   5273600 Jan 10 21:11 result.tar.gz
[2026-01-10 21:12:18] -rw-r--r--. 1 boincer umatlas      9348 Jan 10 21:11 runtime_log.err
[2026-01-10 21:12:18] -rw-------. 1 boincer umatlas       658 Jan 10 21:11 cifKDmbZAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm17fKDmmdEfhm.diag
[2026-01-10 21:12:18] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 21:12 boinc_mmap_file
[2026-01-10 21:12:18] -rw-r--r--. 1 boincer umatlas        28 Jan 10 21:12 wrapper_checkpoint.txt
[2026-01-10 21:12:18] -rw-r--r--. 1 boincer umatlas     21238 Jan 10 21:12 stderr.txt
[2026-01-10 21:12:18] HITS file was successfully produced:
[2026-01-10 21:12:18] -rw-------. 1 boincer umatlas 226475510 Jan 10 21:08 shared/HITS.pool.root.1
[2026-01-10 21:12:18]  *** Contents of shared directory: ***
[2026-01-10 21:12:18] total 444664
[2026-01-10 21:12:18] -rw-r--r--. 2 boincer umatlas 222966428 Jan 10 10:49 ATLAS.root_0
[2026-01-10 21:12:18] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 10:49 start_atlas.sh
[2026-01-10 21:12:18] -rw-r--r--. 2 boincer umatlas    592391 Jan 10 10:49 input.tar.gz
[2026-01-10 21:12:18] -rw-------. 1 boincer umatlas 226475510 Jan 10 21:08 HITS.pool.root.1
[2026-01-10 21:12:18] -rw-------. 1 boincer umatlas   5273600 Jan 10 21:11 result.tar.gz
21:12:20 (1459876): run_atlas exited; CPU time 57580.389774
21:12:20 (1459876): called boinc_finish(0)

</stderr_txt>
]]>

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