Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:46:30 (3315045): wrapper (7.7.26015): starting
10:46:30 (3315045): wrapper: running run_atlas (--nthreads 11)
[2026-01-10 10:46:30] Arguments: --nthreads 11
[2026-01-10 10:46:30] Threads: 11
[2026-01-10 10:46:30] Checking for CVMFS
[2026-01-10 10:46:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 10:46:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 10:46:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 10:46:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 10:46:31] 2.13.3.0 1684472 18511 180840 154984 3 168 29186253 40960000 8311 16776704 0 22364616 99.691 17174665 42108 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 10:46:31] CVMFS is ok
[2026-01-10 10:46:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 10:46:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 10:46:31] Further information can be found at the LHC@home message board.
[2026-01-10 10:46:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 10:46:31] Checking for apptainer binary...
[2026-01-10 10:46:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 10:46:31] Running /usr/bin/apptainer --version
[2026-01-10 10:46:31] apptainer version 1.4.5-2.el9
[2026-01-10 10:46:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 10:46:31] c-206-36.aglt2.org
[2026-01-10 10:46:31] apptainer works
[2026-01-10 10:46:31] Set ATHENA_PROC_NUMBER=11
[2026-01-10 10:46:31] Set ATHENA_CORE_NUMBER=11
[2026-01-10 10:46:31] Starting ATLAS job with PandaID=6965384243
[2026-01-10 10:46:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 12:14:02]  *** The last 200 lines of the pilot log: ***
[2026-01-10 12:14:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/80/c0/log.47962010._002384.job.log.tgz.1
[2026-01-10 12:14:02]  workdir=None
[2026-01-10 12:14:02] ]
[2026-01-10 12:14:02] 2026-01-10 17:13:16,853 | INFO     | transferring file log.47962010._002384.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6965384243/log.47962010._002384.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 12:14:02] 2026-01-10 17:13:16,856 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6965384243/log.47962010._002384.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._002384.job
[2026-01-10 12:14:02] 2026-01-10 17:13:16,877 | INFO     | adding to output.list: log.47962010._002384.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/80/c0/log.47962010._002384.job.log.tgz.
[2026-01-10 12:14:02] 2026-01-10 17:13:16,877 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 12:14:02] 2026-01-10 17:13:16,877 | INFO     | summary of transferred files:
[2026-01-10 12:14:02] 2026-01-10 17:13:16,877 | INFO     |  -- lfn=log.47962010._002384.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 12:14:02] 2026-01-10 17:13:16,877 | INFO     | stage-out finished correctly
[2026-01-10 12:14:02] 2026-01-10 17:13:17,790 | INFO     | monitor loop #374: job 0:6965384243 is in state 'finished'
[2026-01-10 12:14:02] 2026-01-10 17:13:17,791 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 12:14:02] 2026-01-10 17:13:18,281 | INFO     | time since job start (5196s) is within the limit (349056.0s)
[2026-01-10 12:14:02] 2026-01-10 17:13:19,448 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 12:14:02] 2026-01-10 17:13:20,286 | INFO     | time since job start (5198s) is within the limit (349056.0s)
[2026-01-10 12:14:02] 2026-01-10 17:13:20,295 | INFO     | monitor loop #375: job 0:6965384243 is in state 'finished'
[2026-01-10 12:14:02] 2026-01-10 17:13:20,296 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 12:14:02] 2026-01-10 17:13:21,435 | INFO     | job 6965384243 has state=finished
[2026-01-10 12:14:02] 2026-01-10 17:13:21,435 | INFO     | preparing for final server update for job 6965384243 in state='finished'
[2026-01-10 12:14:02] 2026-01-10 17:13:21,435 | INFO     | this job has now completed (state=finished)
[2026-01-10 12:14:02] 2026-01-10 17:13:21,435 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 12:14:02] 2026-01-10 17:13:21,435 | INFO     | log transfer has been attempted: DONE
[2026-01-10 12:14:02] 2026-01-10 17:13:21,436 | INFO     | job 6965384243 has finished - writing final server update
[2026-01-10 12:14:02] 2026-01-10 17:13:21,436 | INFO     | total number of processed events: 50 (read)
[2026-01-10 12:14:02] 2026-01-10 17:13:21,441 | INFO     | executing command: lscpu
[2026-01-10 12:14:02] 2026-01-10 17:13:21,489 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 12:14:02] 2026-01-10 17:13:22,294 | INFO     | time since job start (5200s) is within the limit (349056.0s)
[2026-01-10 12:14:02] 2026-01-10 17:13:22,801 | INFO     | monitor loop #376: job 0:6965384243 is in state 'finished'
[2026-01-10 12:14:02] 2026-01-10 17:13:22,801 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 12:14:02] 2026-01-10 17:13:24,303 | INFO     | time since job start (5202s) is within the limit (349056.0s)
[2026-01-10 12:14:02] 2026-01-10 17:13:25,306 | INFO     | monitor loop #377: job 0:6965384243 is in state 'finished'
[2026-01-10 12:14:02] 2026-01-10 17:13:25,306 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 12:14:02] 2026-01-10 17:13:25,665 | INFO     | PID=3319026 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 12:14:02] 2026-01-10 17:13:25,665 | INFO     | .. there are 9 such processes running
[2026-01-10 12:14:02] 2026-01-10 17:13:26,666 | INFO     | time since job start (5204s) is within the limit (349056.0s)
[2026-01-10 12:14:02] 2026-01-10 17:13:27,855 | INFO     | monitor loop #378: job 0:6965384243 is in state 'finished'
[2026-01-10 12:14:02] 2026-01-10 17:13:27,856 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 12:14:02] 2026-01-10 17:13:28,673 | INFO     | time since job start (5206s) is within the limit (349056.0s)
[2026-01-10 12:14:02] 2026-01-10 17:13:28,674 | INFO     | 5208s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-10 12:14:02] 2026-01-10 17:13:29,448 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 12:14:02] 2026-01-10 17:13:29,452 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3264.676375
[2026-01-10 12:14:02] 2026-01-10 17:13:29,462 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965384243/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 12:14:02] 2026-01-10 17:13:29,463 | INFO     | extracted standard info from prmon json
[2026-01-10 12:14:02] 2026-01-10 17:13:29,463 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 12:14:02] 2026-01-10 17:13:29,463 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 12:14:02] 2026-01-10 17:13:29,464 | INFO     | fitting pss+swap vs Time
[2026-01-10 12:14:02] 2026-01-10 17:13:29,465 | INFO     | sum of square deviations: 147106049.48717925
[2026-01-10 12:14:02] 2026-01-10 17:13:29,465 | INFO     | sum of deviations: -12229680570.641024
[2026-01-10 12:14:02] 2026-01-10 17:13:29,465 | INFO     | mean x: 1768062683.4871795
[2026-01-10 12:14:02] 2026-01-10 17:13:29,465 | INFO     | mean y: 2918830.358974359
[2026-01-10 12:14:02] 2026-01-10 17:13:29,465 | INFO     | intersect: 146991040143.50107
[2026-01-10 12:14:02] 2026-01-10 17:13:29,465 | INFO     | chi2: 0.6279815371858354
[2026-01-10 12:14:02] 2026-01-10 17:13:29,465 | INFO     | current memory leak: -83.14 B/s (using 78 data points, chi2=0.63)
[2026-01-10 12:14:02] 2026-01-10 17:13:29,466 | INFO     | could have reported an average CPU frequency of 3239 MHz (6 samples)
[2026-01-10 12:14:02] 2026-01-10 17:13:29,466 | INFO     | ..............................
[2026-01-10 12:14:02] 2026-01-10 17:13:29,466 | INFO     | . Timing measurements:
[2026-01-10 12:14:02] 2026-01-10 17:13:29,466 | INFO     | . get job = 0 s
[2026-01-10 12:14:02] 2026-01-10 17:13:29,466 | INFO     | . initial setup = 2 s
[2026-01-10 12:14:02] 2026-01-10 17:13:29,466 | INFO     | . payload setup = 6 s
[2026-01-10 12:14:02] 2026-01-10 17:13:29,466 | INFO     | . stage-in = 0 s
[2026-01-10 12:14:02] 2026-01-10 17:13:29,466 | INFO     | . payload execution = 5168 s
[2026-01-10 12:14:02] 2026-01-10 17:13:29,466 | INFO     | . stage-out = 0 s
[2026-01-10 12:14:02] 2026-01-10 17:13:29,466 | INFO     | . log creation = 0 s
[2026-01-10 12:14:02] 2026-01-10 17:13:29,466 | INFO     | ..............................
[2026-01-10 12:14:02] 2026-01-10 17:13:29,548 | INFO     | 
[2026-01-10 12:14:02] 2026-01-10 17:13:29,548 | INFO     | job summary report
[2026-01-10 12:14:02] 2026-01-10 17:13:29,548 | INFO     | --------------------------------------------------
[2026-01-10 12:14:02] 2026-01-10 17:13:29,548 | INFO     | PanDA job id: 6965384243
[2026-01-10 12:14:02] 2026-01-10 17:13:29,549 | INFO     | task id: 47962010
[2026-01-10 12:14:02] 2026-01-10 17:13:29,549 | INFO     | errors: (none)
[2026-01-10 12:14:02] 2026-01-10 17:13:29,549 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 12:14:02] 2026-01-10 17:13:29,549 | INFO     | pilot state: finished 
[2026-01-10 12:14:02] 2026-01-10 17:13:29,549 | INFO     | transexitcode: 0
[2026-01-10 12:14:02] 2026-01-10 17:13:29,549 | INFO     | exeerrorcode: 0
[2026-01-10 12:14:02] 2026-01-10 17:13:29,549 | INFO     | exeerrordiag: 
[2026-01-10 12:14:02] 2026-01-10 17:13:29,549 | INFO     | exitcode: 0
[2026-01-10 12:14:02] 2026-01-10 17:13:29,549 | INFO     | exitmsg: OK
[2026-01-10 12:14:02] 2026-01-10 17:13:29,549 | INFO     | cpuconsumptiontime: 11327 s
[2026-01-10 12:14:02] 2026-01-10 17:13:29,549 | INFO     | nevents: 50
[2026-01-10 12:14:02] 2026-01-10 17:13:29,549 | INFO     | neventsw: 0
[2026-01-10 12:14:02] 2026-01-10 17:13:29,549 | INFO     | pid: 3326081
[2026-01-10 12:14:02] 2026-01-10 17:13:29,549 | INFO     | pgrp: 3326081
[2026-01-10 12:14:02] 2026-01-10 17:13:29,549 | INFO     | corecount: 11
[2026-01-10 12:14:02] 2026-01-10 17:13:29,549 | INFO     | event service: False
[2026-01-10 12:14:02] 2026-01-10 17:13:29,549 | INFO     | sizes: {0: 2284455, 1: 2284569, 5: 2284859, 11: 2284915, 5178: 2312054, 5179: 2321048, 5182: 2321232, 5192: 2321478}
[2026-01-10 12:14:02] 2026-01-10 17:13:29,550 | INFO     | --------------------------------------------------
[2026-01-10 12:14:02] 2026-01-10 17:13:29,550 | INFO     | 
[2026-01-10 12:14:02] 2026-01-10 17:13:29,550 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 12:14:02] 2026-01-10 17:13:29,580 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 12:14:02] 2026-01-10 17:13:29,580 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 12:14:02] 2026-01-10 17:13:29,580 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 12:14:02] 2026-01-10 17:13:29,580 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 12:14:02] 2026-01-10 17:13:29,580 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 12:14:02] 2026-01-10 17:13:29,580 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 12:14:02] 2026-01-10 17:13:29,580 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 12:14:02] 2026-01-10 17:13:29,581 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 12:14:02] 2026-01-10 17:13:29,581 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 12:14:02] 2026-01-10 17:13:29,581 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 12:14:02] 2026-01-10 17:13:29,581 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 12:14:02] 2026-01-10 17:13:29,581 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 12:14:02] 2026-01-10 17:13:29,581 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 12:14:02] 2026-01-10 17:13:29,581 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 12:14:02] 2026-01-10 17:13:29,581 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 12:14:02] 2026-01-10 17:13:29,581 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 12:14:02] 2026-01-10 17:13:29,581 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 12:14:02] 2026-01-10 17:13:29,581 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 12:14:02] 2026-01-10 17:13:29,581 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 12:14:02] 2026-01-10 17:13:29,581 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 12:14:02] 2026-01-10 17:13:29,581 | INFO     | job 6965384243 has completed (purged errors)
[2026-01-10 12:14:02] 2026-01-10 17:13:29,581 | INFO     | overall cleanup function is called
[2026-01-10 12:14:02] 2026-01-10 17:13:30,598 | INFO     | --- collectZombieJob: --- 10, [3326081]
[2026-01-10 12:14:02] 2026-01-10 17:13:30,604 | INFO     | zombie collector waiting for pid 3326081
[2026-01-10 12:14:02] 2026-01-10 17:13:30,604 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 12:14:02] 2026-01-10 17:13:30,604 | INFO     | collected zombie processes
[2026-01-10 12:14:02] 2026-01-10 17:13:30,604 | INFO     | will attempt to kill all subprocesses of pid=3326081
[2026-01-10 12:14:02] 2026-01-10 17:13:30,861 | INFO     | process IDs to be killed: [3326081] (in reverse order)
[2026-01-10 12:14:02] 2026-01-10 17:13:30,960 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 12:14:02] 2026-01-10 17:13:30,960 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 12:14:02] 2026-01-10 17:13:30,972 | INFO     | did not find any defunct processes belonging to 3326081
[2026-01-10 12:14:02] 2026-01-10 17:13:30,983 | INFO     | did not find any defunct processes belonging to 3326081
[2026-01-10 12:14:02] 2026-01-10 17:13:30,983 | INFO     | ready for new job
[2026-01-10 12:14:02] 2026-01-10 17:13:30,984 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 12:14:02] 2026-01-10 17:13:30,985 | INFO     | ***************************************
[2026-01-10 12:14:02] 2026-01-10 17:13:30,985 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 12:14:02] 2026-01-10 17:13:30,985 | INFO     | ***************************************
[2026-01-10 12:14:02] 2026-01-10 17:13:30,985 | INFO     | 
[2026-01-10 12:14:02] 2026-01-10 17:13:30,989 | INFO     | architecture information:
[2026-01-10 12:14:02] 2026-01-10 17:13:30,990 | INFO     | executing command: cat /etc/os-release
[2026-01-10 12:14:02] 2026-01-10 17:13:31,004 | INFO     | cat /etc/os-release:
[2026-01-10 12:14:02] NAME="CentOS Linux"
[2026-01-10 12:14:02] VERSION="7 (Core)"
[2026-01-10 12:14:02] ID="centos"
[2026-01-10 12:14:02] ID_LIKE="rhel fedora"
[2026-01-10 12:14:02] VERSION_ID="7"
[2026-01-10 12:14:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 12:14:02] ANSI_COLOR="0;31"
[2026-01-10 12:14:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 12:14:02] HOME_URL="https://www.centos.org/"
[2026-01-10 12:14:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 12:14:02] 
[2026-01-10 12:14:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 12:14:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 12:14:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 12:14:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 12:14:02] 
[2026-01-10 12:14:02] 2026-01-10 17:13:31,004 | INFO     | ***************************************
[2026-01-10 12:14:02] 2026-01-10 17:13:31,507 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 12:14:02] 2026-01-10 17:13:31,540 | INFO     | sufficient remaining disk space (86244327424 B)
[2026-01-10 12:14:02] 2026-01-10 17:13:31,541 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 12:14:02] 2026-01-10 17:13:31,541 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 12:14:02] 2026-01-10 17:13:31,541 | INFO     | update_server=False
[2026-01-10 12:14:02] 2026-01-10 17:13:31,541 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 12:14:02] 2026-01-10 17:13:31,541 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:14:02] 2026-01-10 17:13:31,541 | INFO     | aborting loop
[2026-01-10 12:14:02] 2026-01-10 17:13:31,547 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:14:02] 2026-01-10 17:13:32,473 | INFO     | all data control threads have been joined
[2026-01-10 12:14:02] 2026-01-10 17:13:32,534 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 12:14:02] 2026-01-10 17:13:32,546 | INFO     | [job] retrieve thread has finished
[2026-01-10 12:14:02] 2026-01-10 17:13:32,547 | INFO     | [job] job monitor thread has finished
[2026-01-10 12:14:02] 2026-01-10 17:13:32,552 | INFO     | [job] queue monitor thread has finished
[2026-01-10 12:14:02] 2026-01-10 17:13:32,564 | INFO     | all payload control threads have been joined
[2026-01-10 12:14:02] 2026-01-10 17:13:32,614 | INFO     | [data] copytool_in thread has finished
[2026-01-10 12:14:02] 2026-01-10 17:13:33,083 | INFO     | [payload] validate_post thread has finished
[2026-01-10 12:14:02] 2026-01-10 17:13:33,245 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 12:14:02] 2026-01-10 17:13:33,256 | INFO     | all job control threads have been joined
[2026-01-10 12:14:02] 2026-01-10 17:13:33,396 | INFO     | [payload] failed_post thread has finished
[2026-01-10 12:14:02] 2026-01-10 17:13:33,479 | INFO     | [data] control thread has finished
[2026-01-10 12:14:02] 2026-01-10 17:13:33,536 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 12:14:02] 2026-01-10 17:13:33,553 | INFO     | [job] validate thread has finished
[2026-01-10 12:14:02] 2026-01-10 17:13:33,570 | INFO     | [payload] control thread has finished
[2026-01-10 12:14:02] 2026-01-10 17:13:33,615 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 12:14:02] 2026-01-10 17:13:34,262 | INFO     | [job] control thread has finished
[2026-01-10 12:14:02] 2026-01-10 17:13:34,541 | INFO     | [data] copytool_out thread has finished
[2026-01-10 12:14:02] 2026-01-10 17:13:34,583 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 12:14:02] 2026-01-10 17:13:38,591 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 12:14:02] 2026-01-10 17:13:41,785 | INFO     | job.realtimelogging is not enabled
[2026-01-10 12:14:02] 2026-01-10 17:13:42,791 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 12:14:02] 2026-01-10 17:13:50,661 | INFO     | [monitor] cgroup control has ended
[2026-01-10 12:14:02] 2026-01-10 17:13:50,908 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139870090483520)>', '<ExcThread(monitor, started 139869737170688)>']
[2026-01-10 12:14:02] 2026-01-10 17:13:55,935 | INFO     | all workflow threads have been joined
[2026-01-10 12:14:02] 2026-01-10 17:13:55,935 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 12:14:02] 2026-01-10 17:13:55,936 | INFO     | traces error code: 0
[2026-01-10 12:14:02] 2026-01-10 17:13:55,936 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 12:14:02] 2026-01-10 17:14:01,983 | INFO     | PID=3319026 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 12:14:02] 2026-01-10 17:14:01,985 | INFO     | .. there are 9 such processes running
[2026-01-10 12:14:02] 2026-01-10 17:14:01,985 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 12:14:02] 2026-01-10 17:14:01,985 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 12:14:02] 2026-01-10 17:14:01,985 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 12:14:02] 2026-01-10 17:14:01,985 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 12:14:02] 2026-01-10 17:14:01,985 | INFO     | [monitor] control thread has ended
[2026-01-10 12:14:02] 2026-01-10 17:14:02,118 [wrapper] ==== pilot stdout END ====
[2026-01-10 12:14:02] 2026-01-10 17:14:02,124 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 12:14:02] 2026-01-10 17:14:02,126 [wrapper] pilotpid: 3319026
[2026-01-10 12:14:02] 2026-01-10 17:14:02,129 [wrapper] Pilot exit status: 0
[2026-01-10 12:14:02] 2026-01-10 17:14:02,183 [wrapper] pandaids: 6965384243
[2026-01-10 12:14:02] 2026-01-10 17:14:02,251 [wrapper] cleanup supervisor_pilot 3431572 3319027
[2026-01-10 12:14:02] 2026-01-10 17:14:02,254 [wrapper] Test setup, not cleaning
[2026-01-10 12:14:02] 2026-01-10 17:14:02,259 [wrapper] apfmon messages muted
[2026-01-10 12:14:02] 2026-01-10 17:14:02,263 [wrapper] ==== wrapper stdout END ====
[2026-01-10 12:14:02] 2026-01-10 17:14:02,267 [wrapper] ==== wrapper stderr END ====
[2026-01-10 12:14:02]  *** Error codes and diagnostics ***
[2026-01-10 12:14:02]     "exeErrorCode": 0,
[2026-01-10 12:14:02]     "exeErrorDiag": "",
[2026-01-10 12:14:02]     "pilotErrorCode": 0,
[2026-01-10 12:14:02]     "pilotErrorDiag": "",
[2026-01-10 12:14:02]  *** Listing of results directory ***
[2026-01-10 12:14:02] total 436744
[2026-01-10 12:14:02] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 12:14:02] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 12:14:02] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:15 queuedata.json
[2026-01-10 12:14:02] -rw-r--r--. 1 boincer umatlas       100 Jan 10 10:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 12:14:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 10:46 run_atlas
[2026-01-10 12:14:02] -rw-r--r--. 1 boincer umatlas       105 Jan 10 10:46 job.xml
[2026-01-10 12:14:02] -rw-r--r--. 2 boincer umatlas 393996253 Jan 10 10:46 EVNT.47962006._000098.pool.root.1
[2026-01-10 12:14:02] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 10:46 start_atlas.sh
[2026-01-10 12:14:02] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 10:46 shared
[2026-01-10 12:14:02] -rw-r--r--. 2 boincer umatlas    592612 Jan 10 10:46 input.tar.gz
[2026-01-10 12:14:02] -rw-r--r--. 1 boincer umatlas         0 Jan 10 10:46 boinc_lockfile
[2026-01-10 12:14:02] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 10:46 pandaJob.out
[2026-01-10 12:14:02] -rw-------. 1 boincer umatlas        57 Jan 10 10:46 setup.sh.local
[2026-01-10 12:14:02] -rw-------. 1 boincer umatlas    989556 Jan 10 10:46 agis_schedconf.cvmfs.json
[2026-01-10 12:14:02] -rw-------. 1 boincer umatlas   1516240 Jan 10 10:46 agis_ddmendpoints.agis.ALL.json
[2026-01-10 12:14:02] drwx------. 5 boincer umatlas      4096 Jan 10 10:46 pilot3
[2026-01-10 12:14:02] -rw-r--r--. 1 boincer umatlas       529 Jan 10 12:00 boinc_task_state.xml
[2026-01-10 12:14:02] -rw-r--r--. 1 boincer umatlas      6905 Jan 10 12:09 init_data.xml
[2026-01-10 12:14:02] -rw-------. 1 boincer umatlas  44742801 Jan 10 12:13 HITS.47962010._002384.pool.root.1
[2026-01-10 12:14:02] -rw-------. 1 boincer umatlas        95 Jan 10 12:13 pilot_heartbeat.json
[2026-01-10 12:14:02] -rw-------. 1 boincer umatlas      1028 Jan 10 12:13 memory_monitor_summary.json
[2026-01-10 12:14:02] -rw-------. 1 boincer umatlas   1524031 Jan 10 12:13 log.47962010._002384.job.log.tgz.1
[2026-01-10 12:14:02] -rw-------. 1 boincer umatlas      8524 Jan 10 12:13 heartbeat.json
[2026-01-10 12:14:02] -rw-r--r--. 1 boincer umatlas        27 Jan 10 12:13 wrapper_checkpoint.txt
[2026-01-10 12:14:02] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 12:13 boinc_mmap_file
[2026-01-10 12:14:02] -rw-------. 1 boincer umatlas       822 Jan 10 12:14 pilotlog.txt
[2026-01-10 12:14:02] -rw-------. 1 boincer umatlas    763993 Jan 10 12:14 log.47962010._002384.job.log.1
[2026-01-10 12:14:02] -rw-------. 1 boincer umatlas       353 Jan 10 12:14 output.list
[2026-01-10 12:14:02] -rw-r--r--. 1 boincer umatlas       620 Jan 10 12:14 runtime_log
[2026-01-10 12:14:02] -rw-------. 1 boincer umatlas   2304000 Jan 10 12:14 result.tar.gz
[2026-01-10 12:14:02] -rw-r--r--. 1 boincer umatlas      9344 Jan 10 12:14 runtime_log.err
[2026-01-10 12:14:02] -rw-------. 1 boincer umatlas       653 Jan 10 12:14 N0CLDmayny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDahKDm8HWnAn.diag
[2026-01-10 12:14:02] -rw-r--r--. 1 boincer umatlas     22497 Jan 10 12:14 stderr.txt
[2026-01-10 12:14:02] HITS file was successfully produced:
[2026-01-10 12:14:02] -rw-------. 1 boincer umatlas 44742801 Jan 10 12:13 shared/HITS.pool.root.1
[2026-01-10 12:14:02]  *** Contents of shared directory: ***
[2026-01-10 12:14:02] total 431308
[2026-01-10 12:14:02] -rw-r--r--. 2 boincer umatlas 393996253 Jan 10 10:46 ATLAS.root_0
[2026-01-10 12:14:02] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 10:46 start_atlas.sh
[2026-01-10 12:14:02] -rw-r--r--. 2 boincer umatlas    592612 Jan 10 10:46 input.tar.gz
[2026-01-10 12:14:02] -rw-------. 1 boincer umatlas  44742801 Jan 10 12:13 HITS.pool.root.1
[2026-01-10 12:14:02] -rw-------. 1 boincer umatlas   2304000 Jan 10 12:14 result.tar.gz
12:14:04 (3315045): run_atlas exited; CPU time 11199.530274
12:14:04 (3315045): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN