Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:26:42 (394483): wrapper (7.7.26015): starting
10:26:42 (394483): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 10:26:42] Arguments: --nthreads 9
[2026-01-10 10:26:42] Threads: 9
[2026-01-10 10:26:42] Checking for CVMFS
[2026-01-10 10:26:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 10:26:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 10:26:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 10:26:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 10:26:43] 2.13.3.0 11754 94983 218808 154984 0 420 22965319 32935937 23086 16776704 0 494300885 99.517 647487374 17829 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 10:26:43] CVMFS is ok
[2026-01-10 10:26:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 10:26:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 10:26:43] Further information can be found at the LHC@home message board.
[2026-01-10 10:26:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 10:26:43] Checking for apptainer binary...
[2026-01-10 10:26:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 10:26:43] Running /usr/bin/apptainer --version
[2026-01-10 10:26:43] apptainer version 1.4.5-2.el9
[2026-01-10 10:26:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 10:26:43] c7-2-38.aglt2.org
[2026-01-10 10:26:43] apptainer works
[2026-01-10 10:26:43] Set ATHENA_PROC_NUMBER=9
[2026-01-10 10:26:43] Set ATHENA_CORE_NUMBER=9
[2026-01-10 10:26:43] Starting ATLAS job with PandaID=6963189298
[2026-01-10 10:26:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 12:58:21]  *** The last 200 lines of the pilot log: ***
[2026-01-10 12:58:21] 2026-01-10 17:57:14,572 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 12:58:21] 2026-01-10 17:57:14,652 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 12:58:21] 2026-01-10 17:57:14,665 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3299.572062500001
[2026-01-10 12:58:21] 2026-01-10 17:57:14,680 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963189298/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 12:58:21] 2026-01-10 17:57:14,681 | INFO     | extracted standard info from prmon json
[2026-01-10 12:58:21] 2026-01-10 17:57:14,681 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 12:58:21] 2026-01-10 17:57:14,681 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 12:58:21] 2026-01-10 17:57:14,681 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 12:58:21] 2026-01-10 17:57:14,682 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 12:58:21] 2026-01-10 17:57:14,684 | INFO     | fitting pss+swap vs Time
[2026-01-10 12:58:21] 2026-01-10 17:57:14,684 | INFO     | sum of square deviations: 1005171482.9729747
[2026-01-10 12:58:21] 2026-01-10 17:57:14,710 | INFO     | sum of deviations: -37467514259.51351
[2026-01-10 12:58:21] 2026-01-10 17:57:14,711 | INFO     | mean x: 1768063334.5135136
[2026-01-10 12:58:21] 2026-01-10 17:57:14,711 | INFO     | mean y: 2659905.756756757
[2026-01-10 12:58:21] 2026-01-10 17:57:14,711 | INFO     | intersect: 65906776088.67593
[2026-01-10 12:58:21] 2026-01-10 17:57:14,711 | INFO     | chi2: 2.403101737935494
[2026-01-10 12:58:21] 2026-01-10 17:57:14,711 | INFO     | sum of square deviations: 906695827.9720294
[2026-01-10 12:58:21] 2026-01-10 17:57:14,712 | INFO     | sum of deviations: -25927487457.72028
[2026-01-10 12:58:21] 2026-01-10 17:57:14,712 | INFO     | mean x: 1768063182.013986
[2026-01-10 12:58:21] 2026-01-10 17:57:14,712 | INFO     | mean y: 2677374.8601398603
[2026-01-10 12:58:21] 2026-01-10 17:57:14,712 | INFO     | intersect: 50561458569.05219
[2026-01-10 12:58:21] 2026-01-10 17:57:14,712 | INFO     | chi2: 1.7280469280830253
[2026-01-10 12:58:21] 2026-01-10 17:57:14,712 | INFO     | current chi2=1.7280469280830253 (change=28.09097922056386 %)
[2026-01-10 12:58:21] 2026-01-10 17:57:14,713 | INFO     | sum of square deviations: 814871460.4710153
[2026-01-10 12:58:21] 2026-01-10 17:57:14,713 | INFO     | sum of deviations: -24067990468.702908
[2026-01-10 12:58:21] 2026-01-10 17:57:14,713 | INFO     | mean x: 1768063029.5144928
[2026-01-10 12:58:21] 2026-01-10 17:57:14,713 | INFO     | mean y: 2680464.6014492754
[2026-01-10 12:58:21] 2026-01-10 17:57:14,713 | INFO     | intersect: 52224075134.41074
[2026-01-10 12:58:21] 2026-01-10 17:57:14,713 | INFO     | chi2: 1.724078549422811
[2026-01-10 12:58:21] 2026-01-10 17:57:14,713 | INFO     | current chi2=1.724078549422811 (change=0.22964530625429885 %)
[2026-01-10 12:58:21] 2026-01-10 17:57:14,713 | INFO     | right removable region: 137
[2026-01-10 12:58:21] 2026-01-10 17:57:14,714 | INFO     | sum of square deviations: 906694607.9720294
[2026-01-10 12:58:21] 2026-01-10 17:57:14,734 | INFO     | sum of deviations: -58993903942.91609
[2026-01-10 12:58:21] 2026-01-10 17:57:14,735 | INFO     | mean x: 1768063487.013986
[2026-01-10 12:58:21] 2026-01-10 17:57:14,735 | INFO     | mean y: 2692636.958041958
[2026-01-10 12:58:21] 2026-01-10 17:57:14,735 | INFO     | intersect: 115041391004.40004
[2026-01-10 12:58:21] 2026-01-10 17:57:14,735 | INFO     | chi2: 0.9442479037118092
[2026-01-10 12:58:21] 2026-01-10 17:57:14,735 | INFO     | current chi2=0.9442479037118092 (change=60.707119103371255 %)
[2026-01-10 12:58:21] 2026-01-10 17:57:14,735 | INFO     | sum of square deviations: 814869020.4710153
[2026-01-10 12:58:21] 2026-01-10 17:57:14,736 | INFO     | sum of deviations: -54060954719.68116
[2026-01-10 12:58:21] 2026-01-10 17:57:14,736 | INFO     | mean x: 1768063639.5144928
[2026-01-10 12:58:21] 2026-01-10 17:57:14,736 | INFO     | mean y: 2684430.84057971
[2026-01-10 12:58:21] 2026-01-10 17:57:14,736 | INFO     | intersect: 117301545911.74225
[2026-01-10 12:58:21] 2026-01-10 17:57:14,736 | INFO     | chi2: 0.9447005071691926
[2026-01-10 12:58:21] 2026-01-10 17:57:14,736 | INFO     | current chi2=0.9447005071691926 (change=-0.047932693904242166 %)
[2026-01-10 12:58:21] 2026-01-10 17:57:14,736 | INFO     | left removable region: 20
[2026-01-10 12:58:21] 2026-01-10 17:57:14,736 | INFO     | sum of square deviations: 496587825.9658112
[2026-01-10 12:58:21] 2026-01-10 17:57:14,737 | INFO     | sum of deviations: -29830486601.53846
[2026-01-10 12:58:21] 2026-01-10 17:57:14,737 | INFO     | mean x: 1768063609.0170941
[2026-01-10 12:58:21] 2026-01-10 17:57:14,737 | INFO     | mean y: 2686845.769230769
[2026-01-10 12:58:21] 2026-01-10 17:57:14,737 | INFO     | intersect: 106211891022.0378
[2026-01-10 12:58:21] 2026-01-10 17:57:14,737 | INFO     | chi2: 0.21872451325357722
[2026-01-10 12:58:21] 2026-01-10 17:57:14,737 | INFO     | current memory leak: -60.07 B/s (using 117 data points, chi2=0.22)
[2026-01-10 12:58:21] 2026-01-10 17:57:14,738 | INFO     | could have reported an average CPU frequency of 3345 MHz (8 samples)
[2026-01-10 12:58:21] 2026-01-10 17:57:14,738 | INFO     | ..............................
[2026-01-10 12:58:21] 2026-01-10 17:57:14,738 | INFO     | . Timing measurements:
[2026-01-10 12:58:21] 2026-01-10 17:57:14,738 | INFO     | . get job = 0 s
[2026-01-10 12:58:21] 2026-01-10 17:57:14,738 | INFO     | . initial setup = 2 s
[2026-01-10 12:58:21] 2026-01-10 17:57:14,738 | INFO     | . payload setup = 7 s
[2026-01-10 12:58:21] 2026-01-10 17:57:14,738 | INFO     | . stage-in = 0 s
[2026-01-10 12:58:21] 2026-01-10 17:57:14,738 | INFO     | . payload execution = 8979 s
[2026-01-10 12:58:21] 2026-01-10 17:57:14,751 | INFO     | . stage-out = 0 s
[2026-01-10 12:58:21] 2026-01-10 17:57:14,751 | INFO     | . log creation = 0 s
[2026-01-10 12:58:21] 2026-01-10 17:57:14,751 | INFO     | ..............................
[2026-01-10 12:58:21] 2026-01-10 17:57:15,394 | INFO     | 
[2026-01-10 12:58:21] 2026-01-10 17:57:15,394 | INFO     | job summary report
[2026-01-10 12:58:21] 2026-01-10 17:57:15,394 | INFO     | --------------------------------------------------
[2026-01-10 12:58:21] 2026-01-10 17:57:15,394 | INFO     | PanDA job id: 6963189298
[2026-01-10 12:58:21] 2026-01-10 17:57:15,395 | INFO     | task id: 47898826
[2026-01-10 12:58:21] 2026-01-10 17:57:15,395 | INFO     | errors: (none)
[2026-01-10 12:58:21] 2026-01-10 17:57:15,395 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 12:58:21] 2026-01-10 17:57:15,395 | INFO     | pilot state: finished 
[2026-01-10 12:58:21] 2026-01-10 17:57:15,395 | INFO     | transexitcode: 0
[2026-01-10 12:58:21] 2026-01-10 17:57:15,395 | INFO     | exeerrorcode: 0
[2026-01-10 12:58:21] 2026-01-10 17:57:15,395 | INFO     | exeerrordiag: 
[2026-01-10 12:58:21] 2026-01-10 17:57:15,395 | INFO     | exitcode: 0
[2026-01-10 12:58:21] 2026-01-10 17:57:15,395 | INFO     | exitmsg: OK
[2026-01-10 12:58:21] 2026-01-10 17:57:15,395 | INFO     | cpuconsumptiontime: 41474 s
[2026-01-10 12:58:21] 2026-01-10 17:57:15,395 | INFO     | nevents: 400
[2026-01-10 12:58:21] 2026-01-10 17:57:15,395 | INFO     | neventsw: 0
[2026-01-10 12:58:21] 2026-01-10 17:57:15,395 | INFO     | pid: 409259
[2026-01-10 12:58:21] 2026-01-10 17:57:15,395 | INFO     | pgrp: 409259
[2026-01-10 12:58:21] 2026-01-10 17:57:15,395 | INFO     | corecount: 9
[2026-01-10 12:58:21] 2026-01-10 17:57:15,395 | INFO     | event service: False
[2026-01-10 12:58:21] 2026-01-10 17:57:15,395 | INFO     | sizes: {0: 2283971, 7: 2284233, 11: 2284261, 8991: 2312574, 8992: 2321628, 8998: 2321766}
[2026-01-10 12:58:21] 2026-01-10 17:57:15,395 | INFO     | --------------------------------------------------
[2026-01-10 12:58:21] 2026-01-10 17:57:15,395 | INFO     | 
[2026-01-10 12:58:21] 2026-01-10 17:57:15,395 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 12:58:21] 2026-01-10 17:57:15,431 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 12:58:21] 2026-01-10 17:57:15,432 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 12:58:21] 2026-01-10 17:57:15,432 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 12:58:21] 2026-01-10 17:57:15,432 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 12:58:21] 2026-01-10 17:57:15,432 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 12:58:21] 2026-01-10 17:57:15,432 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 12:58:21] 2026-01-10 17:57:15,432 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 12:58:21] 2026-01-10 17:57:15,432 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 12:58:21] 2026-01-10 17:57:15,432 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 12:58:21] 2026-01-10 17:57:15,432 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 12:58:21] 2026-01-10 17:57:15,432 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 12:58:21] 2026-01-10 17:57:15,432 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 12:58:21] 2026-01-10 17:57:15,432 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 12:58:21] 2026-01-10 17:57:15,432 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 12:58:21] 2026-01-10 17:57:15,432 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 12:58:21] 2026-01-10 17:57:15,433 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 12:58:21] 2026-01-10 17:57:15,433 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 12:58:21] 2026-01-10 17:57:15,433 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 12:58:21] 2026-01-10 17:57:15,433 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 12:58:21] 2026-01-10 17:57:15,433 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 12:58:21] 2026-01-10 17:57:15,433 | INFO     | job 6963189298 has completed (purged errors)
[2026-01-10 12:58:21] 2026-01-10 17:57:15,433 | INFO     | overall cleanup function is called
[2026-01-10 12:58:21] 2026-01-10 17:57:16,460 | INFO     | --- collectZombieJob: --- 10, [409259]
[2026-01-10 12:58:21] 2026-01-10 17:57:16,460 | INFO     | zombie collector waiting for pid 409259
[2026-01-10 12:58:21] 2026-01-10 17:57:16,461 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 12:58:21] 2026-01-10 17:57:16,461 | INFO     | collected zombie processes
[2026-01-10 12:58:21] 2026-01-10 17:57:16,461 | INFO     | will attempt to kill all subprocesses of pid=409259
[2026-01-10 12:58:21] 2026-01-10 17:57:16,937 | INFO     | process IDs to be killed: [409259] (in reverse order)
[2026-01-10 12:58:21] 2026-01-10 17:57:17,081 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 12:58:21] 2026-01-10 17:57:17,081 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 12:58:21] 2026-01-10 17:57:17,101 | INFO     | did not find any defunct processes belonging to 409259
[2026-01-10 12:58:21] 2026-01-10 17:57:17,121 | INFO     | did not find any defunct processes belonging to 409259
[2026-01-10 12:58:21] 2026-01-10 17:57:17,121 | INFO     | ready for new job
[2026-01-10 12:58:21] 2026-01-10 17:57:17,121 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 12:58:21] 2026-01-10 17:57:17,123 | INFO     | ***************************************
[2026-01-10 12:58:21] 2026-01-10 17:57:17,123 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 12:58:21] 2026-01-10 17:57:17,123 | INFO     | ***************************************
[2026-01-10 12:58:21] 2026-01-10 17:57:17,123 | INFO     | 
[2026-01-10 12:58:21] 2026-01-10 17:57:17,128 | INFO     | architecture information:
[2026-01-10 12:58:21] 2026-01-10 17:57:17,129 | INFO     | executing command: cat /etc/os-release
[2026-01-10 12:58:21] 2026-01-10 17:57:17,149 | INFO     | cat /etc/os-release:
[2026-01-10 12:58:21] NAME="CentOS Linux"
[2026-01-10 12:58:21] VERSION="7 (Core)"
[2026-01-10 12:58:21] ID="centos"
[2026-01-10 12:58:21] ID_LIKE="rhel fedora"
[2026-01-10 12:58:21] VERSION_ID="7"
[2026-01-10 12:58:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 12:58:21] ANSI_COLOR="0;31"
[2026-01-10 12:58:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 12:58:21] HOME_URL="https://www.centos.org/"
[2026-01-10 12:58:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 12:58:21] 
[2026-01-10 12:58:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 12:58:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 12:58:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 12:58:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 12:58:21] 
[2026-01-10 12:58:21] 2026-01-10 17:57:17,150 | INFO     | ***************************************
[2026-01-10 12:58:21] 2026-01-10 17:57:17,653 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 12:58:21] 2026-01-10 17:57:17,685 | INFO     | sufficient remaining disk space (73872179200 B)
[2026-01-10 12:58:21] 2026-01-10 17:57:17,685 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 12:58:21] 2026-01-10 17:57:17,685 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 12:58:21] 2026-01-10 17:57:17,685 | INFO     | update_server=False
[2026-01-10 12:58:21] 2026-01-10 17:57:17,685 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 12:58:21] 2026-01-10 17:57:17,815 | INFO     | all job control threads have been joined
[2026-01-10 12:58:21] 2026-01-10 17:57:18,087 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:58:21] 2026-01-10 17:57:18,087 | INFO     | aborting loop
[2026-01-10 12:58:21] 2026-01-10 17:57:18,394 | INFO     | all payload control threads have been joined
[2026-01-10 12:58:21] 2026-01-10 17:57:18,691 | INFO     | [job] retrieve thread has finished
[2026-01-10 12:58:21] 2026-01-10 17:57:18,709 | INFO     | all data control threads have been joined
[2026-01-10 12:58:21] 2026-01-10 17:57:18,822 | INFO     | [job] control thread has finished
[2026-01-10 12:58:21] 2026-01-10 17:57:19,093 | INFO     | [job] job monitor thread has finished
[2026-01-10 12:58:21] 2026-01-10 17:57:19,176 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 12:58:21] 2026-01-10 17:57:19,257 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 12:58:21] 2026-01-10 17:57:19,309 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 12:58:21] 2026-01-10 17:57:19,310 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 12:58:21] 2026-01-10 17:57:19,399 | INFO     | [payload] control thread has finished
[2026-01-10 12:58:21] 2026-01-10 17:57:19,563 | INFO     | [payload] failed_post thread has finished
[2026-01-10 12:58:21] 2026-01-10 17:57:19,680 | INFO     | [data] copytool_in thread has finished
[2026-01-10 12:58:21] 2026-01-10 17:57:19,715 | INFO     | [data] control thread has finished
[2026-01-10 12:58:21] 2026-01-10 17:57:19,837 | INFO     | [job] validate thread has finished
[2026-01-10 12:58:21] 2026-01-10 17:57:19,994 | INFO     | [payload] validate_post thread has finished
[2026-01-10 12:58:21] 2026-01-10 17:57:20,040 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:58:21] 2026-01-10 17:57:20,192 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 12:58:21] 2026-01-10 17:57:21,046 | INFO     | [job] queue monitor thread has finished
[2026-01-10 12:58:21] 2026-01-10 17:57:21,183 | INFO     | [data] copytool_out thread has finished
[2026-01-10 12:58:21] 2026-01-10 17:57:23,321 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 12:58:21] 2026-01-10 17:57:28,025 | INFO     | job.realtimelogging is not enabled
[2026-01-10 12:58:21] 2026-01-10 17:57:29,031 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 12:58:21] 2026-01-10 17:57:47,185 | INFO     | PID=402418 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 12:58:21] 2026-01-10 17:57:47,186 | INFO     | .. there are 27 such processes running
[2026-01-10 12:58:21] 2026-01-10 17:57:47,186 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 12:58:21] 2026-01-10 17:57:47,186 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 12:58:21] 2026-01-10 17:57:47,187 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 12:58:21] 2026-01-10 17:58:13,784 | INFO     | [monitor] cgroup control has ended
[2026-01-10 12:58:21] 2026-01-10 17:58:15,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140259925038912)>', '<ExcThread(monitor, started 140259421558528)>']
[2026-01-10 12:58:21] 2026-01-10 17:58:16,384 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 12:58:21] 2026-01-10 17:58:16,384 | INFO     | [monitor] control thread has ended
[2026-01-10 12:58:21] 2026-01-10 17:58:20,810 | INFO     | all workflow threads have been joined
[2026-01-10 12:58:21] 2026-01-10 17:58:20,810 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 12:58:21] 2026-01-10 17:58:20,814 | INFO     | traces error code: 0
[2026-01-10 12:58:21] 2026-01-10 17:58:20,814 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 12:58:21] 2026-01-10 17:58:21,154 [wrapper] ==== pilot stdout END ====
[2026-01-10 12:58:21] 2026-01-10 17:58:21,156 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 12:58:21] 2026-01-10 17:58:21,158 [wrapper] pilotpid: 402418
[2026-01-10 12:58:21] 2026-01-10 17:58:21,160 [wrapper] Pilot exit status: 0
[2026-01-10 12:58:21] 2026-01-10 17:58:21,171 [wrapper] pandaids: 6963189298
[2026-01-10 12:58:21] 2026-01-10 17:58:21,277 [wrapper] cleanup supervisor_pilot 1274267 402419
[2026-01-10 12:58:21] 2026-01-10 17:58:21,279 [wrapper] Test setup, not cleaning
[2026-01-10 12:58:21] 2026-01-10 17:58:21,281 [wrapper] apfmon messages muted
[2026-01-10 12:58:21] 2026-01-10 17:58:21,283 [wrapper] ==== wrapper stdout END ====
[2026-01-10 12:58:21] 2026-01-10 17:58:21,285 [wrapper] ==== wrapper stderr END ====
[2026-01-10 12:58:21]  *** Error codes and diagnostics ***
[2026-01-10 12:58:21]     "exeErrorCode": 0,
[2026-01-10 12:58:21]     "exeErrorDiag": "",
[2026-01-10 12:58:21]     "pilotErrorCode": 0,
[2026-01-10 12:58:21]     "pilotErrorDiag": "",
[2026-01-10 12:58:21]  *** Listing of results directory ***
[2026-01-10 12:58:21] total 440844
[2026-01-10 12:58:21] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:21 queuedata.json
[2026-01-10 12:58:21] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-10 12:58:21] -rwx------. 1 boincer umatlas     36322 Jan  8 23:22 runpilot2-wrapper.sh
[2026-01-10 12:58:21] -rw-r--r--. 1 boincer umatlas       100 Jan 10 10:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 12:58:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 10:26 run_atlas
[2026-01-10 12:58:21] -rw-r--r--. 1 boincer umatlas       105 Jan 10 10:26 job.xml
[2026-01-10 12:58:21] -rw-r--r--. 2 boincer umatlas 224397398 Jan 10 10:26 EVNT.47898824._001466.pool.root.1
[2026-01-10 12:58:21] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 10:26 start_atlas.sh
[2026-01-10 12:58:21] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 10:26 shared
[2026-01-10 12:58:21] -rw-r--r--. 2 boincer umatlas    592394 Jan 10 10:26 input.tar.gz
[2026-01-10 12:58:21] -rw-r--r--. 1 boincer umatlas         0 Jan 10 10:26 boinc_lockfile
[2026-01-10 12:58:21] -rw-r--r--. 1 boincer umatlas      2520 Jan 10 10:26 pandaJob.out
[2026-01-10 12:58:21] -rw-------. 1 boincer umatlas        57 Jan 10 10:26 setup.sh.local
[2026-01-10 12:58:21] -rw-------. 1 boincer umatlas    989556 Jan 10 10:26 agis_schedconf.cvmfs.json
[2026-01-10 12:58:21] -rw-------. 1 boincer umatlas   1516240 Jan 10 10:26 agis_ddmendpoints.agis.ALL.json
[2026-01-10 12:58:21] drwx------. 5 boincer umatlas      4096 Jan 10 10:26 pilot3
[2026-01-10 12:58:21] -rw-r--r--. 1 boincer umatlas      6944 Jan 10 12:56 init_data.xml
[2026-01-10 12:58:21] -rw-------. 1 boincer umatlas 219862267 Jan 10 12:56 HITS.47898826._038180.pool.root.1
[2026-01-10 12:58:21] -rw-r--r--. 1 boincer umatlas       530 Jan 10 12:56 boinc_task_state.xml
[2026-01-10 12:58:21] -rw-------. 1 boincer umatlas      1045 Jan 10 12:57 memory_monitor_summary.json
[2026-01-10 12:58:21] -rw-------. 1 boincer umatlas    393992 Jan 10 12:57 log.47898826._038180.job.log.tgz.1
[2026-01-10 12:58:21] -rw-------. 1 boincer umatlas      7797 Jan 10 12:57 heartbeat.json
[2026-01-10 12:58:21] -rw-------. 1 boincer umatlas        95 Jan 10 12:57 pilot_heartbeat.json
[2026-01-10 12:58:21] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 12:58 boinc_mmap_file
[2026-01-10 12:58:21] -rw-r--r--. 1 boincer umatlas        27 Jan 10 12:58 wrapper_checkpoint.txt
[2026-01-10 12:58:21] -rw-------. 1 boincer umatlas      4895 Jan 10 12:58 pilotlog.txt
[2026-01-10 12:58:21] -rw-------. 1 boincer umatlas   1229222 Jan 10 12:58 log.47898826._038180.job.log.1
[2026-01-10 12:58:21] -rw-------. 1 boincer umatlas       357 Jan 10 12:58 output.list
[2026-01-10 12:58:21] -rw-r--r--. 1 boincer umatlas       620 Jan 10 12:58 runtime_log
[2026-01-10 12:58:21] -rw-------. 1 boincer umatlas   1638400 Jan 10 12:58 result.tar.gz
[2026-01-10 12:58:21] -rw-r--r--. 1 boincer umatlas      9337 Jan 10 12:58 runtime_log.err
[2026-01-10 12:58:21] -rw-------. 1 boincer umatlas       656 Jan 10 12:58 pe0NDmDCJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSugKDmvHWhEo.diag
[2026-01-10 12:58:21] -rw-r--r--. 1 boincer umatlas     21131 Jan 10 12:58 stderr.txt
[2026-01-10 12:58:21] HITS file was successfully produced:
[2026-01-10 12:58:21] -rw-------. 1 boincer umatlas 219862267 Jan 10 12:56 shared/HITS.pool.root.1
[2026-01-10 12:58:21]  *** Contents of shared directory: ***
[2026-01-10 12:58:21] total 436056
[2026-01-10 12:58:21] -rw-r--r--. 2 boincer umatlas 224397398 Jan 10 10:26 ATLAS.root_0
[2026-01-10 12:58:21] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 10:26 start_atlas.sh
[2026-01-10 12:58:21] -rw-r--r--. 2 boincer umatlas    592394 Jan 10 10:26 input.tar.gz
[2026-01-10 12:58:21] -rw-------. 1 boincer umatlas 219862267 Jan 10 12:56 HITS.pool.root.1
[2026-01-10 12:58:21] -rw-------. 1 boincer umatlas   1638400 Jan 10 12:58 result.tar.gz
12:58:22 (394483): run_atlas exited; CPU time 41718.935315
12:58:22 (394483): called boinc_finish(0)

</stderr_txt>
]]>

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