Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:46:47 (1909244): wrapper (7.7.26015): starting
09:46:47 (1909244): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 09:46:47] Arguments: --nthreads 8
[2026-01-10 09:46:47] Threads: 8
[2026-01-10 09:46:47] Checking for CVMFS
[2026-01-10 09:46:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 09:46:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 09:46:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 09:46:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 09:46:48] 2.13.3.0 7433 24461 212080 154982 2 513 38721874 40960001 14424 16776704 0 69289755 99.682 60684521 39391 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 09:46:48] CVMFS is ok
[2026-01-10 09:46:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 09:46:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 09:46:48] Further information can be found at the LHC@home message board.
[2026-01-10 09:46:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 09:46:48] Checking for apptainer binary...
[2026-01-10 09:46:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 09:46:48] Running /usr/bin/apptainer --version
[2026-01-10 09:46:49] apptainer version 1.4.5-2.el9
[2026-01-10 09:46:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 09:46:49] c-212-16.aglt2.org
[2026-01-10 09:46:49] apptainer works
[2026-01-10 09:46:49] Set ATHENA_PROC_NUMBER=8
[2026-01-10 09:46:49] Set ATHENA_CORE_NUMBER=8
[2026-01-10 09:46:50] Starting ATLAS job with PandaID=6965384165
[2026-01-10 09:46:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 11:29:28]  *** The last 200 lines of the pilot log: ***
[2026-01-10 11:29:28] 2026-01-10 16:28:21,107 | INFO     | time since job start (6012s) is within the limit (349056.0s)
[2026-01-10 11:29:28] 2026-01-10 16:28:21,144 | INFO     | monitor loop #371: job 0:6965384165 is in state 'finished'
[2026-01-10 11:29:28] 2026-01-10 16:28:21,144 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:29:28] 2026-01-10 16:28:22,303 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 11:29:28] 2026-01-10 16:28:23,114 | INFO     | time since job start (6014s) is within the limit (349056.0s)
[2026-01-10 11:29:28] 2026-01-10 16:28:23,649 | INFO     | monitor loop #372: job 0:6965384165 is in state 'finished'
[2026-01-10 11:29:28] 2026-01-10 16:28:23,649 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:29:28] 2026-01-10 16:28:24,838 | INFO     | job 6965384165 has state=finished
[2026-01-10 11:29:28] 2026-01-10 16:28:24,838 | INFO     | preparing for final server update for job 6965384165 in state='finished'
[2026-01-10 11:29:28] 2026-01-10 16:28:24,838 | INFO     | this job has now completed (state=finished)
[2026-01-10 11:29:28] 2026-01-10 16:28:24,838 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 11:29:28] 2026-01-10 16:28:24,839 | INFO     | log transfer has been attempted: DONE
[2026-01-10 11:29:28] 2026-01-10 16:28:24,839 | INFO     | job 6965384165 has finished - writing final server update
[2026-01-10 11:29:28] 2026-01-10 16:28:24,839 | INFO     | total number of processed events: 50 (read)
[2026-01-10 11:29:28] 2026-01-10 16:28:24,898 | INFO     | executing command: lscpu
[2026-01-10 11:29:28] 2026-01-10 16:28:25,504 | INFO     | PID=1914196 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-10 11:29:28] 2026-01-10 16:28:25,504 | INFO     | .. there are 20 such processes running
[2026-01-10 11:29:28] 2026-01-10 16:28:25,539 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 11:29:28] 2026-01-10 16:28:26,173 | INFO     | monitor loop #373: job 0:6965384165 is in state 'finished'
[2026-01-10 11:29:28] 2026-01-10 16:28:26,173 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:29:28] 2026-01-10 16:28:26,505 | INFO     | time since job start (6017s) is within the limit (349056.0s)
[2026-01-10 11:29:28] 2026-01-10 16:28:28,512 | INFO     | time since job start (6019s) is within the limit (349056.0s)
[2026-01-10 11:29:28] 2026-01-10 16:28:28,678 | INFO     | monitor loop #374: job 0:6965384165 is in state 'finished'
[2026-01-10 11:29:28] 2026-01-10 16:28:28,678 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:29:28] 2026-01-10 16:28:30,519 | INFO     | time since job start (6021s) is within the limit (349056.0s)
[2026-01-10 11:29:28] 2026-01-10 16:28:31,186 | INFO     | monitor loop #375: job 0:6965384165 is in state 'finished'
[2026-01-10 11:29:28] 2026-01-10 16:28:31,186 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:29:28] 2026-01-10 16:28:32,526 | INFO     | time since job start (6023s) is within the limit (349056.0s)
[2026-01-10 11:29:28] 2026-01-10 16:28:33,693 | INFO     | monitor loop #376: job 0:6965384165 is in state 'finished'
[2026-01-10 11:29:28] 2026-01-10 16:28:33,693 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:29:28] 2026-01-10 16:28:34,533 | INFO     | time since job start (6025s) is within the limit (349056.0s)
[2026-01-10 11:29:28] 2026-01-10 16:28:36,231 | INFO     | monitor loop #377: job 0:6965384165 is in state 'finished'
[2026-01-10 11:29:28] 2026-01-10 16:28:36,231 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:29:28] 2026-01-10 16:28:36,557 | INFO     | time since job start (6027s) is within the limit (349056.0s)
[2026-01-10 11:29:28] 2026-01-10 16:28:38,564 | INFO     | time since job start (6029s) is within the limit (349056.0s)
[2026-01-10 11:29:28] 2026-01-10 16:28:38,738 | INFO     | monitor loop #378: job 0:6965384165 is in state 'finished'
[2026-01-10 11:29:28] 2026-01-10 16:28:38,738 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:29:28] 2026-01-10 16:28:40,571 | INFO     | time since job start (6031s) is within the limit (349056.0s)
[2026-01-10 11:29:28] 2026-01-10 16:28:41,259 | INFO     | monitor loop #379: job 0:6965384165 is in state 'finished'
[2026-01-10 11:29:28] 2026-01-10 16:28:41,259 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:29:28] 2026-01-10 16:28:41,537 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 11:29:28] 2026-01-10 16:28:41,556 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3386.101479166666
[2026-01-10 11:29:28] 2026-01-10 16:28:41,569 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6965384165/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 11:29:28] 2026-01-10 16:28:41,570 | INFO     | extracted standard info from prmon json
[2026-01-10 11:29:28] 2026-01-10 16:28:41,570 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 11:29:28] 2026-01-10 16:28:41,570 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 11:29:28] 2026-01-10 16:28:41,572 | INFO     | fitting pss+swap vs Time
[2026-01-10 11:29:28] 2026-01-10 16:28:41,572 | INFO     | sum of square deviations: 226020963.55555567
[2026-01-10 11:29:28] 2026-01-10 16:28:41,573 | INFO     | sum of deviations: 1565016396.6666508
[2026-01-10 11:29:28] 2026-01-10 16:28:41,573 | INFO     | mean x: 1768059636.7777777
[2026-01-10 11:29:28] 2026-01-10 16:28:41,573 | INFO     | mean y: 2362258.8333333335
[2026-01-10 11:29:28] 2026-01-10 16:28:41,573 | INFO     | intersect: -12240052242.516977
[2026-01-10 11:29:28] 2026-01-10 16:28:41,573 | INFO     | chi2: 6.403086823350477
[2026-01-10 11:29:28] 2026-01-10 16:28:41,573 | INFO     | current memory leak: 6.92 B/s (using 90 data points, chi2=6.40)
[2026-01-10 11:29:28] 2026-01-10 16:28:41,573 | INFO     | could have reported an average CPU frequency of 3372 MHz (7 samples)
[2026-01-10 11:29:28] 2026-01-10 16:28:41,574 | INFO     | ..............................
[2026-01-10 11:29:28] 2026-01-10 16:28:41,574 | INFO     | . Timing measurements:
[2026-01-10 11:29:28] 2026-01-10 16:28:41,574 | INFO     | . get job = 0 s
[2026-01-10 11:29:28] 2026-01-10 16:28:41,574 | INFO     | . initial setup = 5 s
[2026-01-10 11:29:28] 2026-01-10 16:28:41,574 | INFO     | . payload setup = 36 s
[2026-01-10 11:29:28] 2026-01-10 16:28:41,574 | INFO     | . stage-in = 0 s
[2026-01-10 11:29:28] 2026-01-10 16:28:41,574 | INFO     | . payload execution = 5900 s
[2026-01-10 11:29:28] 2026-01-10 16:28:41,574 | INFO     | . stage-out = 1 s
[2026-01-10 11:29:28] 2026-01-10 16:28:41,574 | INFO     | . log creation = 0 s
[2026-01-10 11:29:28] 2026-01-10 16:28:41,574 | INFO     | ..............................
[2026-01-10 11:29:28] 2026-01-10 16:28:41,653 | INFO     | 
[2026-01-10 11:29:28] 2026-01-10 16:28:41,656 | INFO     | job summary report
[2026-01-10 11:29:28] 2026-01-10 16:28:41,656 | INFO     | --------------------------------------------------
[2026-01-10 11:29:28] 2026-01-10 16:28:41,656 | INFO     | PanDA job id: 6965384165
[2026-01-10 11:29:28] 2026-01-10 16:28:41,656 | INFO     | task id: 47962010
[2026-01-10 11:29:28] 2026-01-10 16:28:41,656 | INFO     | errors: (none)
[2026-01-10 11:29:28] 2026-01-10 16:28:41,656 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 11:29:28] 2026-01-10 16:28:41,656 | INFO     | pilot state: finished 
[2026-01-10 11:29:28] 2026-01-10 16:28:41,656 | INFO     | transexitcode: 0
[2026-01-10 11:29:28] 2026-01-10 16:28:41,657 | INFO     | exeerrorcode: 0
[2026-01-10 11:29:28] 2026-01-10 16:28:41,657 | INFO     | exeerrordiag: 
[2026-01-10 11:29:28] 2026-01-10 16:28:41,657 | INFO     | exitcode: 0
[2026-01-10 11:29:28] 2026-01-10 16:28:41,657 | INFO     | exitmsg: OK
[2026-01-10 11:29:28] 2026-01-10 16:28:41,657 | INFO     | cpuconsumptiontime: 11473 s
[2026-01-10 11:29:28] 2026-01-10 16:28:41,657 | INFO     | nevents: 50
[2026-01-10 11:29:28] 2026-01-10 16:28:41,657 | INFO     | neventsw: 0
[2026-01-10 11:29:28] 2026-01-10 16:28:41,657 | INFO     | pid: 1925999
[2026-01-10 11:29:28] 2026-01-10 16:28:41,657 | INFO     | pgrp: 1925999
[2026-01-10 11:29:28] 2026-01-10 16:28:41,657 | INFO     | corecount: 8
[2026-01-10 11:29:28] 2026-01-10 16:28:41,657 | INFO     | event service: False
[2026-01-10 11:29:28] 2026-01-10 16:28:41,657 | INFO     | sizes: {0: 2283741, 1: 2284426, 2: 2284625, 3: 2284625, 13: 2284653, 25: 2284709, 33: 2285127, 36: 2285183, 5942: 2312635, 5945: 2321657, 5948: 2321713, 5967: 2322
[2026-01-10 11:29:28] 2026-01-10 16:28:41,657 | INFO     | --------------------------------------------------
[2026-01-10 11:29:28] 2026-01-10 16:28:41,657 | INFO     | 
[2026-01-10 11:29:28] 2026-01-10 16:28:41,658 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 11:29:28] 2026-01-10 16:28:41,738 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 11:29:28] 2026-01-10 16:28:41,738 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 11:29:28] 2026-01-10 16:28:41,738 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 11:29:28] 2026-01-10 16:28:41,738 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 11:29:28] 2026-01-10 16:28:41,738 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 11:29:28] 2026-01-10 16:28:41,738 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 11:29:28] 2026-01-10 16:28:41,739 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 11:29:28] 2026-01-10 16:28:41,739 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 11:29:28] 2026-01-10 16:28:41,739 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 11:29:28] 2026-01-10 16:28:41,739 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 11:29:28] 2026-01-10 16:28:41,739 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 11:29:28] 2026-01-10 16:28:41,739 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 11:29:28] 2026-01-10 16:28:41,739 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 11:29:28] 2026-01-10 16:28:41,739 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 11:29:28] 2026-01-10 16:28:41,739 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 11:29:28] 2026-01-10 16:28:41,739 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 11:29:28] 2026-01-10 16:28:41,739 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 11:29:28] 2026-01-10 16:28:41,739 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 11:29:28] 2026-01-10 16:28:41,739 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 11:29:28] 2026-01-10 16:28:41,739 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 11:29:28] 2026-01-10 16:28:41,739 | INFO     | job 6965384165 has completed (purged errors)
[2026-01-10 11:29:28] 2026-01-10 16:28:41,740 | INFO     | overall cleanup function is called
[2026-01-10 11:29:28] 2026-01-10 16:28:42,754 | INFO     | --- collectZombieJob: --- 10, [1925999]
[2026-01-10 11:29:28] 2026-01-10 16:28:42,754 | INFO     | zombie collector waiting for pid 1925999
[2026-01-10 11:29:28] 2026-01-10 16:28:42,754 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 11:29:28] 2026-01-10 16:28:42,754 | INFO     | collected zombie processes
[2026-01-10 11:29:28] 2026-01-10 16:28:42,754 | INFO     | will attempt to kill all subprocesses of pid=1925999
[2026-01-10 11:29:28] 2026-01-10 16:28:44,298 | INFO     | process IDs to be killed: [1925999] (in reverse order)
[2026-01-10 11:29:28] 2026-01-10 16:28:44,429 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 11:29:28] 2026-01-10 16:28:44,434 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 11:29:28] 2026-01-10 16:28:44,454 | INFO     | did not find any defunct processes belonging to 1925999
[2026-01-10 11:29:28] 2026-01-10 16:28:44,469 | INFO     | did not find any defunct processes belonging to 1925999
[2026-01-10 11:29:28] 2026-01-10 16:28:44,469 | INFO     | ready for new job
[2026-01-10 11:29:28] 2026-01-10 16:28:44,469 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 11:29:28] 2026-01-10 16:28:44,472 | INFO     | ***************************************
[2026-01-10 11:29:28] 2026-01-10 16:28:44,472 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 11:29:28] 2026-01-10 16:28:44,472 | INFO     | ***************************************
[2026-01-10 11:29:28] 2026-01-10 16:28:44,472 | INFO     | 
[2026-01-10 11:29:28] 2026-01-10 16:28:44,498 | INFO     | architecture information:
[2026-01-10 11:29:28] 2026-01-10 16:28:44,519 | INFO     | executing command: cat /etc/os-release
[2026-01-10 11:29:28] 2026-01-10 16:28:44,584 | INFO     | cat /etc/os-release:
[2026-01-10 11:29:28] NAME="CentOS Linux"
[2026-01-10 11:29:28] VERSION="7 (Core)"
[2026-01-10 11:29:28] ID="centos"
[2026-01-10 11:29:28] ID_LIKE="rhel fedora"
[2026-01-10 11:29:28] VERSION_ID="7"
[2026-01-10 11:29:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 11:29:28] ANSI_COLOR="0;31"
[2026-01-10 11:29:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 11:29:28] HOME_URL="https://www.centos.org/"
[2026-01-10 11:29:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 11:29:28] 
[2026-01-10 11:29:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 11:29:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 11:29:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 11:29:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 11:29:28] 
[2026-01-10 11:29:28] 2026-01-10 16:28:44,584 | INFO     | ***************************************
[2026-01-10 11:29:28] 2026-01-10 16:28:45,088 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 11:29:28] 2026-01-10 16:28:45,168 | INFO     | sufficient remaining disk space (123653324800 B)
[2026-01-10 11:29:28] 2026-01-10 16:28:45,168 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 11:29:28] 2026-01-10 16:28:45,169 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 11:29:28] 2026-01-10 16:28:45,169 | INFO     | update_server=False
[2026-01-10 11:29:28] 2026-01-10 16:28:45,169 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 11:29:28] 2026-01-10 16:28:45,169 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:29:28] 2026-01-10 16:28:45,169 | INFO     | aborting loop
[2026-01-10 11:29:28] 2026-01-10 16:28:45,170 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 11:29:28] 2026-01-10 16:28:45,262 | INFO     | all data control threads have been joined
[2026-01-10 11:29:28] 2026-01-10 16:28:45,658 | INFO     | all payload control threads have been joined
[2026-01-10 11:29:28] 2026-01-10 16:28:45,985 | INFO     | all job control threads have been joined
[2026-01-10 11:29:28] 2026-01-10 16:28:46,176 | INFO     | [job] retrieve thread has finished
[2026-01-10 11:29:28] 2026-01-10 16:28:46,178 | INFO     | [job] job monitor thread has finished
[2026-01-10 11:29:28] 2026-01-10 16:28:46,284 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 11:29:28] 2026-01-10 16:28:46,291 | INFO     | [data] control thread has finished
[2026-01-10 11:29:28] 2026-01-10 16:28:46,664 | INFO     | [payload] control thread has finished
[2026-01-10 11:29:28] 2026-01-10 16:28:46,686 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:29:28] 2026-01-10 16:28:46,787 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 11:29:28] 2026-01-10 16:28:46,883 | INFO     | [payload] validate_post thread has finished
[2026-01-10 11:29:28] 2026-01-10 16:28:46,990 | INFO     | [job] control thread has finished
[2026-01-10 11:29:28] 2026-01-10 16:28:47,177 | INFO     | [data] copytool_out thread has finished
[2026-01-10 11:29:28] 2026-01-10 16:28:47,228 | INFO     | [payload] failed_post thread has finished
[2026-01-10 11:29:28] 2026-01-10 16:28:47,345 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 11:29:28] 2026-01-10 16:28:47,457 | INFO     | [job] validate thread has finished
[2026-01-10 11:29:28] 2026-01-10 16:28:47,475 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 11:29:28] 2026-01-10 16:28:47,491 | INFO     | [data] copytool_in thread has finished
[2026-01-10 11:29:28] 2026-01-10 16:28:47,612 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 11:29:28] 2026-01-10 16:28:47,692 | INFO     | [job] queue monitor thread has finished
[2026-01-10 11:29:28] 2026-01-10 16:28:50,813 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 11:29:28] 2026-01-10 16:29:14,543 | INFO     | PID=1914196 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 11:29:28] 2026-01-10 16:29:14,543 | INFO     | .. there are 20 such processes running
[2026-01-10 11:29:28] 2026-01-10 16:29:14,544 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 11:29:28] 2026-01-10 16:29:14,544 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 11:29:28] 2026-01-10 16:29:14,544 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 11:29:28] 2026-01-10 16:29:19,028 | INFO     | [monitor] cgroup control has ended
[2026-01-10 11:29:28] 2026-01-10 16:29:20,622 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139698108266304)>', '<ExcThread(monitor, started 139697737152256)>']
[2026-01-10 11:29:28] 2026-01-10 16:29:21,586 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 11:29:28] 2026-01-10 16:29:21,586 | INFO     | [monitor] control thread has ended
[2026-01-10 11:29:28] 2026-01-10 16:29:25,656 | INFO     | all workflow threads have been joined
[2026-01-10 11:29:28] 2026-01-10 16:29:25,656 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 11:29:28] 2026-01-10 16:29:25,657 | INFO     | traces error code: 0
[2026-01-10 11:29:28] 2026-01-10 16:29:25,657 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 11:29:28] 2026-01-10 16:29:25,928 [wrapper] ==== pilot stdout END ====
[2026-01-10 11:29:28] 2026-01-10 16:29:25,959 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 11:29:28] 2026-01-10 16:29:26,014 [wrapper] pilotpid: 1914196
[2026-01-10 11:29:28] 2026-01-10 16:29:26,059 [wrapper] Pilot exit status: 0
[2026-01-10 11:29:28] 2026-01-10 16:29:26,171 [wrapper] pandaids: 6965384165
[2026-01-10 11:29:28] 2026-01-10 16:29:26,987 [wrapper] cleanup supervisor_pilot 2247826 1914197
[2026-01-10 11:29:28] 2026-01-10 16:29:27,032 [wrapper] Test setup, not cleaning
[2026-01-10 11:29:28] 2026-01-10 16:29:27,091 [wrapper] apfmon messages muted
[2026-01-10 11:29:28] 2026-01-10 16:29:27,133 [wrapper] ==== wrapper stdout END ====
[2026-01-10 11:29:28] 2026-01-10 16:29:27,188 [wrapper] ==== wrapper stderr END ====
[2026-01-10 11:29:28]  *** Error codes and diagnostics ***
[2026-01-10 11:29:28]     "exeErrorCode": 0,
[2026-01-10 11:29:28]     "exeErrorDiag": "",
[2026-01-10 11:29:28]     "pilotErrorCode": 0,
[2026-01-10 11:29:28]     "pilotErrorDiag": "",
[2026-01-10 11:29:28]  *** Listing of results directory ***
[2026-01-10 11:29:28] total 436160
[2026-01-10 11:29:28] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 11:29:28] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 11:29:28] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:15 queuedata.json
[2026-01-10 11:29:28] -rw-r--r--. 1 boincer umatlas       100 Jan 10 09:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 11:29:28] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 09:46 run_atlas
[2026-01-10 11:29:28] -rw-r--r--. 1 boincer umatlas       105 Jan 10 09:46 job.xml
[2026-01-10 11:29:28] -rw-r--r--. 2 boincer umatlas 393071051 Jan 10 09:46 EVNT.47962006._000086.pool.root.1
[2026-01-10 11:29:28] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 09:46 start_atlas.sh
[2026-01-10 11:29:28] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 09:46 shared
[2026-01-10 11:29:28] -rw-r--r--. 2 boincer umatlas    592613 Jan 10 09:46 input.tar.gz
[2026-01-10 11:29:28] -rw-r--r--. 1 boincer umatlas         0 Jan 10 09:46 boinc_lockfile
[2026-01-10 11:29:28] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 09:46 pandaJob.out
[2026-01-10 11:29:28] -rw-------. 1 boincer umatlas        57 Jan 10 09:46 setup.sh.local
[2026-01-10 11:29:28] -rw-------. 1 boincer umatlas    989556 Jan 10 09:48 agis_schedconf.cvmfs.json
[2026-01-10 11:29:28] -rw-------. 1 boincer umatlas   1516240 Jan 10 09:48 agis_ddmendpoints.agis.ALL.json
[2026-01-10 11:29:28] drwx------. 5 boincer umatlas      4096 Jan 10 09:48 pilot3
[2026-01-10 11:29:28] -rw-r--r--. 1 boincer umatlas       529 Jan 10 11:12 boinc_task_state.xml
[2026-01-10 11:29:28] -rw-r--r--. 1 boincer umatlas      6954 Jan 10 11:23 init_data.xml
[2026-01-10 11:29:28] -rw-------. 1 boincer umatlas  45625595 Jan 10 11:27 HITS.47962010._002306.pool.root.1
[2026-01-10 11:29:28] -rw-------. 1 boincer umatlas      1035 Jan 10 11:28 memory_monitor_summary.json
[2026-01-10 11:29:28] -rw-------. 1 boincer umatlas   1206738 Jan 10 11:28 log.47962010._002306.job.log.tgz.1
[2026-01-10 11:29:28] -rw-------. 1 boincer umatlas      8537 Jan 10 11:28 heartbeat.json
[2026-01-10 11:29:28] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 11:29 boinc_mmap_file
[2026-01-10 11:29:28] -rw-r--r--. 1 boincer umatlas        27 Jan 10 11:29 wrapper_checkpoint.txt
[2026-01-10 11:29:28] -rw-------. 1 boincer umatlas        95 Jan 10 11:29 pilot_heartbeat.json
[2026-01-10 11:29:28] -rw-------. 1 boincer umatlas      4825 Jan 10 11:29 pilotlog.txt
[2026-01-10 11:29:28] -rw-------. 1 boincer umatlas    801083 Jan 10 11:29 log.47962010._002306.job.log.1
[2026-01-10 11:29:28] -rw-------. 1 boincer umatlas       353 Jan 10 11:29 output.list
[2026-01-10 11:29:28] -rw-r--r--. 1 boincer umatlas       620 Jan 10 11:29 runtime_log
[2026-01-10 11:29:28] -rw-------. 1 boincer umatlas   2027520 Jan 10 11:29 result.tar.gz
[2026-01-10 11:29:28] -rw-r--r--. 1 boincer umatlas      9342 Jan 10 11:29 runtime_log.err
[2026-01-10 11:29:28] -rw-------. 1 boincer umatlas       654 Jan 10 11:29 6A8KDmSyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPqmKDmvDE6Oo.diag
[2026-01-10 11:29:28] -rw-r--r--. 1 boincer umatlas     22462 Jan 10 11:29 stderr.txt
[2026-01-10 11:29:28] HITS file was successfully produced:
[2026-01-10 11:29:28] -rw-------. 1 boincer umatlas 45625595 Jan 10 11:27 shared/HITS.pool.root.1
[2026-01-10 11:29:28]  *** Contents of shared directory: ***
[2026-01-10 11:29:28] total 430996
[2026-01-10 11:29:28] -rw-r--r--. 2 boincer umatlas 393071051 Jan 10 09:46 ATLAS.root_0
[2026-01-10 11:29:28] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 09:46 start_atlas.sh
[2026-01-10 11:29:28] -rw-r--r--. 2 boincer umatlas    592613 Jan 10 09:46 input.tar.gz
[2026-01-10 11:29:28] -rw-------. 1 boincer umatlas  45625595 Jan 10 11:27 HITS.pool.root.1
[2026-01-10 11:29:28] -rw-------. 1 boincer umatlas   2027520 Jan 10 11:29 result.tar.gz
11:29:29 (1909244): run_atlas exited; CPU time 11550.169764
11:29:29 (1909244): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN