Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:10:47 (2828388): wrapper (7.7.26015): starting
09:10:47 (2828388): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 09:10:47] Arguments: --nthreads 8
[2026-01-10 09:10:47] Threads: 8
[2026-01-10 09:10:47] Checking for CVMFS
[2026-01-10 09:10:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 09:10:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 09:10:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 09:10:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 09:10:48] 2.13.3.0 16090 94904 418044 154981 1 667 31783671 32935936 24809 16776704 0 1018880000 99.549 1179138368 52177 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 09:10:48] CVMFS is ok
[2026-01-10 09:10:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 09:10:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 09:10:49] Further information can be found at the LHC@home message board.
[2026-01-10 09:10:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 09:10:49] Checking for apptainer binary...
[2026-01-10 09:10:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 09:10:49] Running /usr/bin/apptainer --version
[2026-01-10 09:10:49] apptainer version 1.4.5-2.el9
[2026-01-10 09:10:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 09:10:49] c7-9-15.aglt2.org
[2026-01-10 09:10:49] apptainer works
[2026-01-10 09:10:49] Set ATHENA_PROC_NUMBER=8
[2026-01-10 09:10:49] Set ATHENA_CORE_NUMBER=8
[2026-01-10 09:10:49] Starting ATLAS job with PandaID=6965384026
[2026-01-10 09:10:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 10:13:06]  *** The last 200 lines of the pilot log: ***
[2026-01-10 10:13:06] 2026-01-10 15:11:41,755 | INFO     | log transfer has been attempted: DONE
[2026-01-10 10:13:06] 2026-01-10 15:11:41,755 | INFO     | job 6965384026 has finished - writing final server update
[2026-01-10 10:13:06] 2026-01-10 15:11:41,755 | INFO     | total number of processed events: 50 (read)
[2026-01-10 10:13:06] 2026-01-10 15:11:41,764 | INFO     | executing command: lscpu
[2026-01-10 10:13:06] 2026-01-10 15:11:41,913 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 10:13:06] 2026-01-10 15:11:42,379 | INFO     | monitor loop #256: job 0:6965384026 is in state 'finished'
[2026-01-10 10:13:06] 2026-01-10 15:11:42,380 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:13:06] 2026-01-10 15:11:43,254 | INFO     | time since job start (3589s) is within the limit (349056.0s)
[2026-01-10 10:13:06] 2026-01-10 15:11:44,884 | INFO     | monitor loop #257: job 0:6965384026 is in state 'finished'
[2026-01-10 10:13:06] 2026-01-10 15:11:44,884 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:13:06] 2026-01-10 15:11:45,261 | INFO     | time since job start (3591s) is within the limit (349056.0s)
[2026-01-10 10:13:06] 2026-01-10 15:11:47,268 | INFO     | time since job start (3593s) is within the limit (349056.0s)
[2026-01-10 10:13:06] 2026-01-10 15:11:47,394 | INFO     | monitor loop #258: job 0:6965384026 is in state 'finished'
[2026-01-10 10:13:06] 2026-01-10 15:11:47,394 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:13:06] 2026-01-10 15:11:48,694 [wrapper] supervise_pilot (15 min periods counter: 5)
[2026-01-10 10:13:06] 2026-01-10 15:11:49,284 | INFO     | time since job start (3595s) is within the limit (349056.0s)
[2026-01-10 10:13:06] 2026-01-10 15:11:49,908 | INFO     | monitor loop #259: job 0:6965384026 is in state 'finished'
[2026-01-10 10:13:06] 2026-01-10 15:11:49,908 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:13:06] 2026-01-10 15:11:51,296 | INFO     | time since job start (3597s) is within the limit (349056.0s)
[2026-01-10 10:13:06] 2026-01-10 15:11:52,413 | INFO     | monitor loop #260: job 0:6965384026 is in state 'finished'
[2026-01-10 10:13:06] 2026-01-10 15:11:52,413 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:13:06] 2026-01-10 15:11:53,041 | INFO     | PID=2844227 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 10:13:06] 2026-01-10 15:11:53,042 | INFO     | .. there are 32 such processes running
[2026-01-10 10:13:06] 2026-01-10 15:11:54,042 | INFO     | time since job start (3600s) is within the limit (349056.0s)
[2026-01-10 10:13:06] 2026-01-10 15:11:54,921 | INFO     | monitor loop #261: job 0:6965384026 is in state 'finished'
[2026-01-10 10:13:06] 2026-01-10 15:11:54,921 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:13:06] 2026-01-10 15:11:56,049 | INFO     | time since job start (3602s) is within the limit (349056.0s)
[2026-01-10 10:13:06] 2026-01-10 15:11:57,426 | INFO     | monitor loop #262: job 0:6965384026 is in state 'finished'
[2026-01-10 10:13:06] 2026-01-10 15:11:57,426 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:13:06] 2026-01-10 15:11:58,056 | INFO     | time since job start (3604s) is within the limit (349056.0s)
[2026-01-10 10:13:06] 2026-01-10 15:11:59,931 | INFO     | monitor loop #263: job 0:6965384026 is in state 'finished'
[2026-01-10 10:13:06] 2026-01-10 15:11:59,931 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:13:06] 2026-01-10 15:12:00,071 | INFO     | time since job start (3606s) is within the limit (349056.0s)
[2026-01-10 10:13:06] 2026-01-10 15:12:02,078 | INFO     | time since job start (3608s) is within the limit (349056.0s)
[2026-01-10 10:13:06] 2026-01-10 15:12:02,438 | INFO     | monitor loop #264: job 0:6965384026 is in state 'finished'
[2026-01-10 10:13:06] 2026-01-10 15:12:02,438 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:13:06] 2026-01-10 15:12:04,086 | INFO     | time since job start (3610s) is within the limit (349056.0s)
[2026-01-10 10:13:06] 2026-01-10 15:12:04,943 | INFO     | monitor loop #265: job 0:6965384026 is in state 'finished'
[2026-01-10 10:13:06] 2026-01-10 15:12:04,943 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:13:06] 2026-01-10 15:12:05,594 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 10:13:06] 2026-01-10 15:12:05,603 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.236914062501
[2026-01-10 10:13:06] 2026-01-10 15:12:05,628 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6965384026/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 10:13:06] 2026-01-10 15:12:05,629 | INFO     | extracted standard info from prmon json
[2026-01-10 10:13:06] 2026-01-10 15:12:05,629 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 10:13:06] 2026-01-10 15:12:05,629 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 10:13:06] 2026-01-10 15:12:05,638 | INFO     | fitting pss+swap vs Time
[2026-01-10 10:13:06] 2026-01-10 15:12:05,638 | INFO     | sum of square deviations: 38751342.42000001
[2026-01-10 10:13:06] 2026-01-10 15:12:05,638 | INFO     | sum of deviations: -5644251272.780004
[2026-01-10 10:13:06] 2026-01-10 15:12:05,638 | INFO     | mean x: 1768056258.54
[2026-01-10 10:13:06] 2026-01-10 15:12:05,638 | INFO     | mean y: 1846932.14
[2026-01-10 10:13:06] 2026-01-10 15:12:05,639 | INFO     | intersect: 257524636193.257
[2026-01-10 10:13:06] 2026-01-10 15:12:05,639 | INFO     | chi2: 16.368778217550297
[2026-01-10 10:13:06] 2026-01-10 15:12:05,639 | INFO     | current memory leak: -145.65 B/s (using 50 data points, chi2=16.37)
[2026-01-10 10:13:06] 2026-01-10 15:12:05,639 | INFO     | could have reported an average CPU frequency of 3800 MHz (5 samples)
[2026-01-10 10:13:06] 2026-01-10 15:12:05,639 | INFO     | ..............................
[2026-01-10 10:13:06] 2026-01-10 15:12:05,639 | INFO     | . Timing measurements:
[2026-01-10 10:13:06] 2026-01-10 15:12:05,639 | INFO     | . get job = 0 s
[2026-01-10 10:13:06] 2026-01-10 15:12:05,639 | INFO     | . initial setup = 4 s
[2026-01-10 10:13:06] 2026-01-10 15:12:05,639 | INFO     | . payload setup = 41 s
[2026-01-10 10:13:06] 2026-01-10 15:12:05,639 | INFO     | . stage-in = 0 s
[2026-01-10 10:13:06] 2026-01-10 15:12:05,639 | INFO     | . payload execution = 3471 s
[2026-01-10 10:13:06] 2026-01-10 15:12:05,639 | INFO     | . stage-out = 1 s
[2026-01-10 10:13:06] 2026-01-10 15:12:05,639 | INFO     | . log creation = 0 s
[2026-01-10 10:13:06] 2026-01-10 15:12:05,639 | INFO     | ..............................
[2026-01-10 10:13:06] 2026-01-10 15:12:05,855 | INFO     | 
[2026-01-10 10:13:06] 2026-01-10 15:12:05,855 | INFO     | job summary report
[2026-01-10 10:13:06] 2026-01-10 15:12:05,856 | INFO     | --------------------------------------------------
[2026-01-10 10:13:06] 2026-01-10 15:12:05,856 | INFO     | PanDA job id: 6965384026
[2026-01-10 10:13:06] 2026-01-10 15:12:05,856 | INFO     | task id: 47962010
[2026-01-10 10:13:06] 2026-01-10 15:12:05,856 | INFO     | errors: (none)
[2026-01-10 10:13:06] 2026-01-10 15:12:05,856 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 10:13:06] 2026-01-10 15:12:05,856 | INFO     | pilot state: finished 
[2026-01-10 10:13:06] 2026-01-10 15:12:05,856 | INFO     | transexitcode: 0
[2026-01-10 10:13:06] 2026-01-10 15:12:05,856 | INFO     | exeerrorcode: 0
[2026-01-10 10:13:06] 2026-01-10 15:12:05,856 | INFO     | exeerrordiag: 
[2026-01-10 10:13:06] 2026-01-10 15:12:05,856 | INFO     | exitcode: 0
[2026-01-10 10:13:06] 2026-01-10 15:12:05,856 | INFO     | exitmsg: OK
[2026-01-10 10:13:06] 2026-01-10 15:12:05,856 | INFO     | cpuconsumptiontime: 8402 s
[2026-01-10 10:13:06] 2026-01-10 15:12:05,856 | INFO     | nevents: 50
[2026-01-10 10:13:06] 2026-01-10 15:12:05,856 | INFO     | neventsw: 0
[2026-01-10 10:13:06] 2026-01-10 15:12:05,856 | INFO     | pid: 2873611
[2026-01-10 10:13:06] 2026-01-10 15:12:05,856 | INFO     | pgrp: 2873611
[2026-01-10 10:13:06] 2026-01-10 15:12:05,856 | INFO     | corecount: 8
[2026-01-10 10:13:06] 2026-01-10 15:12:05,856 | INFO     | event service: False
[2026-01-10 10:13:06] 2026-01-10 15:12:05,856 | INFO     | sizes: {0: 2284398, 1: 2284597, 11: 2284597, 22: 2284625, 26: 2284915, 33: 2284943, 3517: 2311523, 3519: 2320517, 3520: 2320573, 3546: 2320851}
[2026-01-10 10:13:06] 2026-01-10 15:12:05,856 | INFO     | --------------------------------------------------
[2026-01-10 10:13:06] 2026-01-10 15:12:05,856 | INFO     | 
[2026-01-10 10:13:06] 2026-01-10 15:12:05,856 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2026-01-10 10:13:06] 2026-01-10 15:12:05,947 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 10:13:06] 2026-01-10 15:12:05,948 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 10:13:06] 2026-01-10 15:12:05,948 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 10:13:06] 2026-01-10 15:12:05,948 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 10:13:06] 2026-01-10 15:12:05,948 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 10:13:06] 2026-01-10 15:12:05,948 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 10:13:06] 2026-01-10 15:12:05,948 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 10:13:06] 2026-01-10 15:12:05,948 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 10:13:06] 2026-01-10 15:12:05,948 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 10:13:06] 2026-01-10 15:12:05,948 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 10:13:06] 2026-01-10 15:12:05,948 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 10:13:06] 2026-01-10 15:12:05,948 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 10:13:06] 2026-01-10 15:12:05,948 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 10:13:06] 2026-01-10 15:12:05,948 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 10:13:06] 2026-01-10 15:12:05,948 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 10:13:06] 2026-01-10 15:12:05,948 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 10:13:06] 2026-01-10 15:12:05,948 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 10:13:06] 2026-01-10 15:12:05,948 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 10:13:06] 2026-01-10 15:12:05,949 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 10:13:06] 2026-01-10 15:12:05,949 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 10:13:06] 2026-01-10 15:12:05,949 | INFO     | job 6965384026 has completed (purged errors)
[2026-01-10 10:13:06] 2026-01-10 15:12:05,949 | INFO     | overall cleanup function is called
[2026-01-10 10:13:06] 2026-01-10 15:12:06,971 | INFO     | --- collectZombieJob: --- 10, [2873611]
[2026-01-10 10:13:06] 2026-01-10 15:12:06,971 | INFO     | zombie collector waiting for pid 2873611
[2026-01-10 10:13:06] 2026-01-10 15:12:06,972 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 10:13:06] 2026-01-10 15:12:06,972 | INFO     | collected zombie processes
[2026-01-10 10:13:06] 2026-01-10 15:12:06,972 | INFO     | will attempt to kill all subprocesses of pid=2873611
[2026-01-10 10:13:06] 2026-01-10 15:12:08,279 | INFO     | process IDs to be killed: [2873611] (in reverse order)
[2026-01-10 10:13:06] 2026-01-10 15:12:08,475 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 10:13:06] 2026-01-10 15:12:08,476 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 10:13:06] 2026-01-10 15:12:08,496 | INFO     | did not find any defunct processes belonging to 2873611
[2026-01-10 10:13:06] 2026-01-10 15:12:08,514 | INFO     | did not find any defunct processes belonging to 2873611
[2026-01-10 10:13:06] 2026-01-10 15:12:08,514 | INFO     | ready for new job
[2026-01-10 10:13:06] 2026-01-10 15:12:08,514 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 10:13:06] 2026-01-10 15:12:08,517 | INFO     | ***************************************
[2026-01-10 10:13:06] 2026-01-10 15:12:08,518 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 10:13:06] 2026-01-10 15:12:08,518 | INFO     | ***************************************
[2026-01-10 10:13:06] 2026-01-10 15:12:08,518 | INFO     | 
[2026-01-10 10:13:06] 2026-01-10 15:12:08,533 | INFO     | architecture information:
[2026-01-10 10:13:06] 2026-01-10 15:12:08,534 | INFO     | executing command: cat /etc/os-release
[2026-01-10 10:13:06] 2026-01-10 15:12:08,566 | INFO     | cat /etc/os-release:
[2026-01-10 10:13:06] NAME="CentOS Linux"
[2026-01-10 10:13:06] VERSION="7 (Core)"
[2026-01-10 10:13:06] ID="centos"
[2026-01-10 10:13:06] ID_LIKE="rhel fedora"
[2026-01-10 10:13:06] VERSION_ID="7"
[2026-01-10 10:13:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 10:13:06] ANSI_COLOR="0;31"
[2026-01-10 10:13:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 10:13:06] HOME_URL="https://www.centos.org/"
[2026-01-10 10:13:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 10:13:06] 
[2026-01-10 10:13:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 10:13:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 10:13:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 10:13:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 10:13:06] 
[2026-01-10 10:13:06] 2026-01-10 15:12:08,566 | INFO     | ***************************************
[2026-01-10 10:13:06] 2026-01-10 15:12:09,070 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2026-01-10 10:13:06] 2026-01-10 15:12:09,156 | INFO     | sufficient remaining disk space (71329382400 B)
[2026-01-10 10:13:06] 2026-01-10 15:12:09,156 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 10:13:06] 2026-01-10 15:12:09,156 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 10:13:06] 2026-01-10 15:12:09,156 | INFO     | update_server=False
[2026-01-10 10:13:06] 2026-01-10 15:12:09,156 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 10:13:06] 2026-01-10 15:12:09,157 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:13:06] 2026-01-10 15:12:09,157 | INFO     | aborting loop
[2026-01-10 10:13:06] 2026-01-10 15:12:10,051 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 10:13:06] 2026-01-10 15:12:10,162 | INFO     | [job] retrieve thread has finished
[2026-01-10 10:13:06] 2026-01-10 15:12:10,166 | INFO     | [job] job monitor thread has finished
[2026-01-10 10:13:06] 2026-01-10 15:12:10,207 | INFO     | all data control threads have been joined
[2026-01-10 10:13:06] 2026-01-10 15:12:10,262 | INFO     | [payload] validate_post thread has finished
[2026-01-10 10:13:06] 2026-01-10 15:12:10,345 | INFO     | all payload control threads have been joined
[2026-01-10 10:13:06] 2026-01-10 15:12:10,465 | INFO     | [payload] failed_post thread has finished
[2026-01-10 10:13:06] 2026-01-10 15:12:10,757 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:13:06] 2026-01-10 15:12:10,866 | INFO     | all job control threads have been joined
[2026-01-10 10:13:06] 2026-01-10 15:12:10,958 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 10:13:06] 2026-01-10 15:12:11,036 | INFO     | [job] validate thread has finished
[2026-01-10 10:13:06] 2026-01-10 15:12:11,104 | INFO     | [data] copytool_in thread has finished
[2026-01-10 10:13:06] 2026-01-10 15:12:11,188 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 10:13:06] 2026-01-10 15:12:11,216 | INFO     | [data] control thread has finished
[2026-01-10 10:13:06] 2026-01-10 15:12:11,351 | INFO     | [payload] control thread has finished
[2026-01-10 10:13:06] 2026-01-10 15:12:11,656 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 10:13:06] 2026-01-10 15:12:11,763 | INFO     | [job] queue monitor thread has finished
[2026-01-10 10:13:06] 2026-01-10 15:12:11,872 | INFO     | [job] control thread has finished
[2026-01-10 10:13:06] 2026-01-10 15:12:12,071 | INFO     | [data] copytool_out thread has finished
[2026-01-10 10:13:06] 2026-01-10 15:12:12,645 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 10:13:06] 2026-01-10 15:12:16,654 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 10:13:06] 2026-01-10 15:12:20,104 | INFO     | job.realtimelogging is not enabled
[2026-01-10 10:13:06] 2026-01-10 15:12:21,111 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 10:13:06] 2026-01-10 15:12:39,028 | INFO     | PID=2844227 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 10:13:06] 2026-01-10 15:12:39,028 | INFO     | .. there are 33 such processes running
[2026-01-10 10:13:06] 2026-01-10 15:12:39,029 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 10:13:06] 2026-01-10 15:12:39,029 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 10:13:06] 2026-01-10 15:12:39,029 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 10:13:06] 2026-01-10 15:12:59,720 | INFO     | [monitor] cgroup control has ended
[2026-01-10 10:13:06] 2026-01-10 15:12:59,878 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140539084252992)>', '<ExcThread(monitor, started 140538325997312)>']
[2026-01-10 10:13:06] 2026-01-10 15:13:00,154 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 10:13:06] 2026-01-10 15:13:00,154 | INFO     | [monitor] control thread has ended
[2026-01-10 10:13:06] 2026-01-10 15:13:04,904 | INFO     | all workflow threads have been joined
[2026-01-10 10:13:06] 2026-01-10 15:13:04,904 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 10:13:06] 2026-01-10 15:13:04,905 | INFO     | traces error code: 0
[2026-01-10 10:13:06] 2026-01-10 15:13:04,905 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 10:13:06] 2026-01-10 15:13:05,372 [wrapper] ==== pilot stdout END ====
[2026-01-10 10:13:06] 2026-01-10 15:13:05,376 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 10:13:06] 2026-01-10 15:13:05,379 [wrapper] pilotpid: 2844227
[2026-01-10 10:13:06] 2026-01-10 15:13:05,427 [wrapper] Pilot exit status: 0
[2026-01-10 10:13:06] 2026-01-10 15:13:05,478 [wrapper] pandaids: 6965384026
[2026-01-10 10:13:06] 2026-01-10 15:13:05,776 [wrapper] cleanup supervisor_pilot 3455833 2844228
[2026-01-10 10:13:06] 2026-01-10 15:13:05,819 [wrapper] Test setup, not cleaning
[2026-01-10 10:13:06] 2026-01-10 15:13:05,826 [wrapper] apfmon messages muted
[2026-01-10 10:13:06] 2026-01-10 15:13:05,848 [wrapper] ==== wrapper stdout END ====
[2026-01-10 10:13:06] 2026-01-10 15:13:05,877 [wrapper] ==== wrapper stderr END ====
[2026-01-10 10:13:06]  *** Error codes and diagnostics ***
[2026-01-10 10:13:06]     "exeErrorCode": 0,
[2026-01-10 10:13:06]     "exeErrorDiag": "",
[2026-01-10 10:13:06]     "pilotErrorCode": 0,
[2026-01-10 10:13:06]     "pilotErrorDiag": "",
[2026-01-10 10:13:06]  *** Listing of results directory ***
[2026-01-10 10:13:06] total 431848
[2026-01-10 10:13:06] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 10:13:06] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 10:13:06] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:15 queuedata.json
[2026-01-10 10:13:06] -rw-r--r--. 1 boincer umatlas       100 Jan 10 09:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 10:13:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 09:10 run_atlas
[2026-01-10 10:13:06] -rw-r--r--. 1 boincer umatlas       105 Jan 10 09:10 job.xml
[2026-01-10 10:13:06] -rw-r--r--. 2 boincer umatlas 392755774 Jan 10 09:10 EVNT.47962006._000073.pool.root.1
[2026-01-10 10:13:06] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 09:10 start_atlas.sh
[2026-01-10 10:13:06] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 09:10 shared
[2026-01-10 10:13:06] -rw-r--r--. 2 boincer umatlas    592620 Jan 10 09:10 input.tar.gz
[2026-01-10 10:13:06] -rw-r--r--. 1 boincer umatlas         0 Jan 10 09:10 boinc_lockfile
[2026-01-10 10:13:06] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 09:10 pandaJob.out
[2026-01-10 10:13:06] -rw-------. 1 boincer umatlas        57 Jan 10 09:10 setup.sh.local
[2026-01-10 10:13:06] -rw-------. 1 boincer umatlas    989556 Jan 10 09:11 agis_schedconf.cvmfs.json
[2026-01-10 10:13:06] -rw-------. 1 boincer umatlas   1516240 Jan 10 09:11 agis_ddmendpoints.agis.ALL.json
[2026-01-10 10:13:06] drwx------. 5 boincer umatlas      4096 Jan 10 09:11 pilot3
[2026-01-10 10:13:06] -rw-r--r--. 1 boincer umatlas       528 Jan 10 09:53 boinc_task_state.xml
[2026-01-10 10:13:06] -rw-------. 1 boincer umatlas  42163606 Jan 10 10:11 HITS.47962010._002167.pool.root.1
[2026-01-10 10:13:06] -rw-------. 1 boincer umatlas      1037 Jan 10 10:11 memory_monitor_summary.json
[2026-01-10 10:13:06] -rw-------. 1 boincer umatlas   1157966 Jan 10 10:11 log.47962010._002167.job.log.tgz.1
[2026-01-10 10:13:06] -rw-------. 1 boincer umatlas        95 Jan 10 10:11 pilot_heartbeat.json
[2026-01-10 10:13:06] -rw-------. 1 boincer umatlas      8525 Jan 10 10:12 heartbeat.json
[2026-01-10 10:13:06] -rw-r--r--. 1 boincer umatlas      7170 Jan 10 10:12 init_data.xml
[2026-01-10 10:13:06] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 10:13 boinc_mmap_file
[2026-01-10 10:13:06] -rw-r--r--. 1 boincer umatlas        26 Jan 10 10:13 wrapper_checkpoint.txt
[2026-01-10 10:13:06] -rw-------. 1 boincer umatlas      4896 Jan 10 10:13 pilotlog.txt
[2026-01-10 10:13:06] -rw-------. 1 boincer umatlas    528135 Jan 10 10:13 log.47962010._002167.job.log.1
[2026-01-10 10:13:06] -rw-------. 1 boincer umatlas       353 Jan 10 10:13 output.list
[2026-01-10 10:13:06] -rw-r--r--. 1 boincer umatlas       620 Jan 10 10:13 runtime_log
[2026-01-10 10:13:06] -rw-------. 1 boincer umatlas   1710080 Jan 10 10:13 result.tar.gz
[2026-01-10 10:13:06] -rw-r--r--. 1 boincer umatlas      9337 Jan 10 10:13 runtime_log.err
[2026-01-10 10:13:06] -rw-------. 1 boincer umatlas       650 Jan 10 10:13 GTJODmRyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWpmKDmIoJcUo.diag
[2026-01-10 10:13:06] -rw-r--r--. 1 boincer umatlas     22405 Jan 10 10:13 stderr.txt
[2026-01-10 10:13:06] HITS file was successfully produced:
[2026-01-10 10:13:06] -rw-------. 1 boincer umatlas 42163606 Jan 10 10:11 shared/HITS.pool.root.1
[2026-01-10 10:13:06]  *** Contents of shared directory: ***
[2026-01-10 10:13:06] total 427000
[2026-01-10 10:13:06] -rw-r--r--. 2 boincer umatlas 392755774 Jan 10 09:10 ATLAS.root_0
[2026-01-10 10:13:06] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 09:10 start_atlas.sh
[2026-01-10 10:13:06] -rw-r--r--. 2 boincer umatlas    592620 Jan 10 09:10 input.tar.gz
[2026-01-10 10:13:06] -rw-------. 1 boincer umatlas  42163606 Jan 10 10:11 HITS.pool.root.1
[2026-01-10 10:13:06] -rw-------. 1 boincer umatlas   1710080 Jan 10 10:13 result.tar.gz
10:13:07 (2828388): run_atlas exited; CPU time 8440.105370
10:13:07 (2828388): called boinc_finish(0)

</stderr_txt>
]]>

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