Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:45:10 (2279743): wrapper (7.7.26015): starting
10:45:10 (2279743): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 10:45:10] Arguments: --nthreads 9
[2026-01-10 10:45:10] Threads: 9
[2026-01-10 10:45:10] Checking for CVMFS
[2026-01-10 10:45:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 10:45:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 10:45:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 10:45:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 10:45:11] 2.13.3.0 12161 95047 359872 154984 3 318 28814676 40960001 7470 16776704 0 253954724 99.543 304428570 37550 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 10:45:11] CVMFS is ok
[2026-01-10 10:45:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 10:45:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 10:45:11] Further information can be found at the LHC@home message board.
[2026-01-10 10:45:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 10:45:11] Checking for apptainer binary...
[2026-01-10 10:45:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 10:45:11] Running /usr/bin/apptainer --version
[2026-01-10 10:45:11] apptainer version 1.4.5-2.el9
[2026-01-10 10:45:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 10:45:12] c6-5-7-1.aglt2.org
[2026-01-10 10:45:12] apptainer works
[2026-01-10 10:45:12] Set ATHENA_PROC_NUMBER=9
[2026-01-10 10:45:12] Set ATHENA_CORE_NUMBER=9
[2026-01-10 10:45:12] Starting ATLAS job with PandaID=6963156024
[2026-01-10 10:45:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 17:19:31]  *** The last 200 lines of the pilot log: ***
[2026-01-10 17:19:31] 2026-01-10 22:18:53,041 | INFO     | PID=2283674 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 17:19:31] 2026-01-10 22:18:53,041 | INFO     | .. there are 16 such processes running
[2026-01-10 17:19:31] 2026-01-10 22:18:53,324 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 17:19:31] 2026-01-10 22:18:53,336 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2997.4785178571433
[2026-01-10 17:19:31] 2026-01-10 22:18:53,353 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963156024/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 17:19:31] 2026-01-10 22:18:53,354 | INFO     | extracted standard info from prmon json
[2026-01-10 17:19:31] 2026-01-10 22:18:53,358 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 17:19:31] 2026-01-10 22:18:53,358 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 17:19:31] 2026-01-10 22:18:53,359 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 17:19:31] 2026-01-10 22:18:53,359 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 17:19:31] 2026-01-10 22:18:53,369 | INFO     | fitting pss+swap vs Time
[2026-01-10 17:19:31] 2026-01-10 22:18:53,369 | INFO     | sum of square deviations: 17833826675.222866
[2026-01-10 17:19:31] 2026-01-10 22:18:53,377 | INFO     | sum of deviations: -86263607525.29019
[2026-01-10 17:19:31] 2026-01-10 22:18:53,377 | INFO     | mean x: 1768071735.3626943
[2026-01-10 17:19:31] 2026-01-10 22:18:53,377 | INFO     | mean y: 2583023.202072539
[2026-01-10 17:19:31] 2026-01-10 22:18:53,377 | INFO     | intersect: 8554883605.319297
[2026-01-10 17:19:31] 2026-01-10 22:18:53,377 | INFO     | chi2: 3.286507567599188
[2026-01-10 17:19:31] 2026-01-10 22:18:53,382 | INFO     | sum of square deviations: 17149780024.173176
[2026-01-10 17:19:31] 2026-01-10 22:18:53,385 | INFO     | sum of deviations: -33678466883.74017
[2026-01-10 17:19:31] 2026-01-10 22:18:53,385 | INFO     | mean x: 1768071582.8661418
[2026-01-10 17:19:31] 2026-01-10 22:18:53,385 | INFO     | mean y: 2594654.2992125982
[2026-01-10 17:19:31] 2026-01-10 22:18:53,386 | INFO     | intersect: 3474705676.580983
[2026-01-10 17:19:31] 2026-01-10 22:18:53,390 | INFO     | chi2: 1.7887206850872444
[2026-01-10 17:19:31] 2026-01-10 22:18:53,390 | INFO     | current chi2=1.7887206850872444 (change=45.57381511237734 %)
[2026-01-10 17:19:31] 2026-01-10 22:18:53,391 | INFO     | sum of square deviations: 16483407789.082315
[2026-01-10 17:19:31] 2026-01-10 22:18:53,394 | INFO     | sum of deviations: -33903831726.742016
[2026-01-10 17:19:31] 2026-01-10 22:18:53,398 | INFO     | mean x: 1768071430.3643618
[2026-01-10 17:19:31] 2026-01-10 22:18:53,398 | INFO     | mean y: 2594602.720744681
[2026-01-10 17:19:31] 2026-01-10 22:18:53,398 | INFO     | intersect: 3639245289.457815
[2026-01-10 17:19:31] 2026-01-10 22:18:53,399 | INFO     | chi2: 1.7872560342292392
[2026-01-10 17:19:31] 2026-01-10 22:18:53,399 | INFO     | current chi2=1.7872560342292392 (change=0.08188259185551605 %)
[2026-01-10 17:19:31] 2026-01-10 22:18:53,399 | INFO     | right removable region: 375
[2026-01-10 17:19:31] 2026-01-10 22:18:53,399 | INFO     | sum of square deviations: 17149647163.952911
[2026-01-10 17:19:31] 2026-01-10 22:18:53,407 | INFO     | sum of deviations: -139134624079.4253
[2026-01-10 17:19:31] 2026-01-10 22:18:53,407 | INFO     | mean x: 1768071887.8740158
[2026-01-10 17:19:31] 2026-01-10 22:18:53,407 | INFO     | mean y: 2594723.532808399
[2026-01-10 17:19:31] 2026-01-10 22:18:53,407 | INFO     | intersect: 14346914178.793785
[2026-01-10 17:19:31] 2026-01-10 22:18:53,407 | INFO     | chi2: 1.9712723234997265
[2026-01-10 17:19:31] 2026-01-10 22:18:53,408 | INFO     | current chi2=1.9712723234997265 (change=40.01923674437933 %)
[2026-01-10 17:19:31] 2026-01-10 22:18:53,408 | INFO     | sum of square deviations: 16483258274.372263
[2026-01-10 17:19:31] 2026-01-10 22:18:53,415 | INFO     | sum of deviations: -127065090138.30843
[2026-01-10 17:19:31] 2026-01-10 22:18:53,415 | INFO     | mean x: 1768072040.3776596
[2026-01-10 17:19:31] 2026-01-10 22:18:53,415 | INFO     | mean y: 2591947.5585106383
[2026-01-10 17:19:31] 2026-01-10 22:18:53,415 | INFO     | intersect: 13632192930.690954
[2026-01-10 17:19:31] 2026-01-10 22:18:53,416 | INFO     | chi2: 1.9422498787631677
[2026-01-10 17:19:31] 2026-01-10 22:18:53,416 | INFO     | current chi2=1.9422498787631677 (change=1.4722696803774622 %)
[2026-01-10 17:19:31] 2026-01-10 22:18:53,416 | INFO     | left removable region: 20
[2026-01-10 17:19:31] 2026-01-10 22:18:53,416 | INFO     | sum of square deviations: 13872692262.349258
[2026-01-10 17:19:31] 2026-01-10 22:18:53,427 | INFO     | sum of deviations: -31741644521.267662
[2026-01-10 17:19:31] 2026-01-10 22:18:53,428 | INFO     | mean x: 1768072009.8985915
[2026-01-10 17:19:31] 2026-01-10 22:18:53,428 | INFO     | mean y: 2593165.4647887326
[2026-01-10 17:19:31] 2026-01-10 22:18:53,428 | INFO     | intersect: 4048059767.396063
[2026-01-10 17:19:31] 2026-01-10 22:18:53,428 | INFO     | chi2: 0.24714682630694737
[2026-01-10 17:19:31] 2026-01-10 22:18:53,428 | INFO     | current memory leak: -2.29 B/s (using 355 data points, chi2=0.25)
[2026-01-10 17:19:31] 2026-01-10 22:18:53,429 | INFO     | could have reported an average CPU frequency of 3014 MHz (16 samples)
[2026-01-10 17:19:31] 2026-01-10 22:18:53,429 | INFO     | ..............................
[2026-01-10 17:19:31] 2026-01-10 22:18:53,429 | INFO     | . Timing measurements:
[2026-01-10 17:19:31] 2026-01-10 22:18:53,429 | INFO     | . get job = 0 s
[2026-01-10 17:19:31] 2026-01-10 22:18:53,429 | INFO     | . initial setup = 4 s
[2026-01-10 17:19:31] 2026-01-10 22:18:53,429 | INFO     | . payload setup = 11 s
[2026-01-10 17:19:31] 2026-01-10 22:18:53,430 | INFO     | . stage-in = 0 s
[2026-01-10 17:19:31] 2026-01-10 22:18:53,430 | INFO     | . payload execution = 23498 s
[2026-01-10 17:19:31] 2026-01-10 22:18:53,430 | INFO     | . stage-out = 6 s
[2026-01-10 17:19:31] 2026-01-10 22:18:53,430 | INFO     | . log creation = 1 s
[2026-01-10 17:19:31] 2026-01-10 22:18:53,430 | INFO     | ..............................
[2026-01-10 17:19:31] 2026-01-10 22:18:53,603 | INFO     | 
[2026-01-10 17:19:31] 2026-01-10 22:18:53,603 | INFO     | job summary report
[2026-01-10 17:19:31] 2026-01-10 22:18:53,603 | INFO     | --------------------------------------------------
[2026-01-10 17:19:31] 2026-01-10 22:18:53,603 | INFO     | PanDA job id: 6963156024
[2026-01-10 17:19:31] 2026-01-10 22:18:53,603 | INFO     | task id: 47898826
[2026-01-10 17:19:31] 2026-01-10 22:18:53,603 | INFO     | errors: (none)
[2026-01-10 17:19:31] 2026-01-10 22:18:53,603 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 17:19:31] 2026-01-10 22:18:53,603 | INFO     | pilot state: finished 
[2026-01-10 17:19:31] 2026-01-10 22:18:53,603 | INFO     | transexitcode: 0
[2026-01-10 17:19:31] 2026-01-10 22:18:53,604 | INFO     | exeerrorcode: 0
[2026-01-10 17:19:31] 2026-01-10 22:18:53,604 | INFO     | exeerrordiag: 
[2026-01-10 17:19:31] 2026-01-10 22:18:53,604 | INFO     | exitcode: 0
[2026-01-10 17:19:31] 2026-01-10 22:18:53,604 | INFO     | exitmsg: OK
[2026-01-10 17:19:31] 2026-01-10 22:18:53,604 | INFO     | cpuconsumptiontime: 55131 s
[2026-01-10 17:19:31] 2026-01-10 22:18:53,604 | INFO     | nevents: 400
[2026-01-10 17:19:31] 2026-01-10 22:18:53,604 | INFO     | neventsw: 0
[2026-01-10 17:19:31] 2026-01-10 22:18:53,604 | INFO     | pid: 2293340
[2026-01-10 17:19:31] 2026-01-10 22:18:53,604 | INFO     | pgrp: 2293340
[2026-01-10 17:19:31] 2026-01-10 22:18:53,604 | INFO     | corecount: 9
[2026-01-10 17:19:31] 2026-01-10 22:18:53,604 | INFO     | event service: False
[2026-01-10 17:19:31] 2026-01-10 22:18:53,604 | INFO     | sizes: {0: 2283741, 1: 2283825, 2: 2284024, 12: 2284024, 16: 2284314, 23: 2284342, 23514: 2319290, 23521: 2328344, 23562: 2328482}
[2026-01-10 17:19:31] 2026-01-10 22:18:53,604 | INFO     | --------------------------------------------------
[2026-01-10 17:19:31] 2026-01-10 22:18:53,604 | INFO     | 
[2026-01-10 17:19:31] 2026-01-10 22:18:53,605 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 17:19:31] 2026-01-10 22:18:53,637 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 17:19:31] 2026-01-10 22:18:53,637 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 17:19:31] 2026-01-10 22:18:53,637 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 17:19:31] 2026-01-10 22:18:53,637 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 17:19:31] 2026-01-10 22:18:53,637 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 17:19:31] 2026-01-10 22:18:53,637 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 17:19:31] 2026-01-10 22:18:53,637 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 17:19:31] 2026-01-10 22:18:53,637 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 17:19:31] 2026-01-10 22:18:53,638 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 17:19:31] 2026-01-10 22:18:53,638 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 17:19:31] 2026-01-10 22:18:53,638 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 17:19:31] 2026-01-10 22:18:53,638 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 17:19:31] 2026-01-10 22:18:53,638 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 17:19:31] 2026-01-10 22:18:53,638 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 17:19:31] 2026-01-10 22:18:53,638 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 17:19:31] 2026-01-10 22:18:53,638 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 17:19:31] 2026-01-10 22:18:53,638 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 17:19:31] 2026-01-10 22:18:53,638 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 17:19:31] 2026-01-10 22:18:53,638 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 17:19:31] 2026-01-10 22:18:53,638 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 17:19:31] 2026-01-10 22:18:53,638 | INFO     | job 6963156024 has completed (purged errors)
[2026-01-10 17:19:31] 2026-01-10 22:18:53,639 | INFO     | overall cleanup function is called
[2026-01-10 17:19:31] 2026-01-10 22:18:54,656 | INFO     | --- collectZombieJob: --- 10, [2293340]
[2026-01-10 17:19:31] 2026-01-10 22:18:54,656 | INFO     | zombie collector waiting for pid 2293340
[2026-01-10 17:19:31] 2026-01-10 22:18:54,656 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 17:19:31] 2026-01-10 22:18:54,656 | INFO     | collected zombie processes
[2026-01-10 17:19:31] 2026-01-10 22:18:54,656 | INFO     | will attempt to kill all subprocesses of pid=2293340
[2026-01-10 17:19:31] 2026-01-10 22:18:55,724 | INFO     | process IDs to be killed: [2293340] (in reverse order)
[2026-01-10 17:19:31] 2026-01-10 22:18:56,021 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 17:19:31] 2026-01-10 22:18:56,021 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 17:19:31] 2026-01-10 22:18:56,072 | INFO     | did not find any defunct processes belonging to 2293340
[2026-01-10 17:19:31] 2026-01-10 22:18:56,153 | INFO     | did not find any defunct processes belonging to 2293340
[2026-01-10 17:19:31] 2026-01-10 22:18:56,153 | INFO     | ready for new job
[2026-01-10 17:19:31] 2026-01-10 22:18:56,153 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 17:19:31] 2026-01-10 22:18:56,155 | INFO     | ***************************************
[2026-01-10 17:19:31] 2026-01-10 22:18:56,156 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 17:19:31] 2026-01-10 22:18:56,156 | INFO     | ***************************************
[2026-01-10 17:19:31] 2026-01-10 22:18:56,156 | INFO     | 
[2026-01-10 17:19:31] 2026-01-10 22:18:56,163 | INFO     | architecture information:
[2026-01-10 17:19:31] 2026-01-10 22:18:56,167 | INFO     | executing command: cat /etc/os-release
[2026-01-10 17:19:31] 2026-01-10 22:18:56,284 | INFO     | cat /etc/os-release:
[2026-01-10 17:19:31] NAME="CentOS Linux"
[2026-01-10 17:19:31] VERSION="7 (Core)"
[2026-01-10 17:19:31] ID="centos"
[2026-01-10 17:19:31] ID_LIKE="rhel fedora"
[2026-01-10 17:19:31] VERSION_ID="7"
[2026-01-10 17:19:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 17:19:31] ANSI_COLOR="0;31"
[2026-01-10 17:19:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 17:19:31] HOME_URL="https://www.centos.org/"
[2026-01-10 17:19:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 17:19:31] 
[2026-01-10 17:19:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 17:19:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 17:19:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 17:19:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 17:19:31] 
[2026-01-10 17:19:31] 2026-01-10 22:18:56,285 | INFO     | ***************************************
[2026-01-10 17:19:31] 2026-01-10 22:18:56,788 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 17:19:31] 2026-01-10 22:18:56,979 | INFO     | sufficient remaining disk space (74801217536 B)
[2026-01-10 17:19:31] 2026-01-10 22:18:56,980 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 17:19:31] 2026-01-10 22:18:56,980 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 17:19:31] 2026-01-10 22:18:56,980 | INFO     | update_server=False
[2026-01-10 17:19:31] 2026-01-10 22:18:56,980 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 17:19:31] 2026-01-10 22:18:57,135 | INFO     | all data control threads have been joined
[2026-01-10 17:19:31] 2026-01-10 22:18:57,200 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:19:31] 2026-01-10 22:18:57,200 | INFO     | aborting loop
[2026-01-10 17:19:31] 2026-01-10 22:18:57,986 | INFO     | [job] retrieve thread has finished
[2026-01-10 17:19:31] 2026-01-10 22:18:58,020 | INFO     | [payload] validate_post thread has finished
[2026-01-10 17:19:31] 2026-01-10 22:18:58,115 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 17:19:31] 2026-01-10 22:18:58,171 | INFO     | [data] control thread has finished
[2026-01-10 17:19:31] 2026-01-10 22:18:58,206 | INFO     | [job] job monitor thread has finished
[2026-01-10 17:19:31] 2026-01-10 22:18:58,253 | INFO     | all payload control threads have been joined
[2026-01-10 17:19:31] 2026-01-10 22:18:58,296 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 17:19:31] 2026-01-10 22:18:58,455 | INFO     | [payload] failed_post thread has finished
[2026-01-10 17:19:31] 2026-01-10 22:18:58,635 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:19:31] 2026-01-10 22:18:58,646 | INFO     | all job control threads have been joined
[2026-01-10 17:19:31] 2026-01-10 22:18:58,765 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 17:19:31] 2026-01-10 22:18:58,851 | INFO     | [data] copytool_in thread has finished
[2026-01-10 17:19:31] 2026-01-10 22:18:58,852 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 17:19:31] 2026-01-10 22:18:59,259 | INFO     | [payload] control thread has finished
[2026-01-10 17:19:31] 2026-01-10 22:18:59,269 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 17:19:31] 2026-01-10 22:18:59,347 | INFO     | [job] validate thread has finished
[2026-01-10 17:19:31] 2026-01-10 22:18:59,348 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 17:19:31] 2026-01-10 22:18:59,641 | INFO     | [job] queue monitor thread has finished
[2026-01-10 17:19:31] 2026-01-10 22:18:59,652 | INFO     | [job] control thread has finished
[2026-01-10 17:19:31] 2026-01-10 22:19:00,132 | INFO     | [data] copytool_out thread has finished
[2026-01-10 17:19:31] 2026-01-10 22:19:03,294 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 17:19:31] 2026-01-10 22:19:18,614 | INFO     | [monitor] cgroup control has ended
[2026-01-10 17:19:31] 2026-01-10 22:19:19,794 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140430697056064)>', '<ExcThread(monitor, started 140430414939904)>']
[2026-01-10 17:19:31] 2026-01-10 22:19:24,820 | INFO     | all workflow threads have been joined
[2026-01-10 17:19:31] 2026-01-10 22:19:24,820 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 17:19:31] 2026-01-10 22:19:24,820 | INFO     | traces error code: 0
[2026-01-10 17:19:31] 2026-01-10 22:19:24,821 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 17:19:31] 2026-01-10 22:19:28,969 | INFO     | PID=2283674 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 17:19:31] 2026-01-10 22:19:28,969 | INFO     | .. there are 16 such processes running
[2026-01-10 17:19:31] 2026-01-10 22:19:28,970 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 17:19:31] 2026-01-10 22:19:28,970 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 17:19:31] 2026-01-10 22:19:28,970 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 17:19:31] 2026-01-10 22:19:28,970 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 17:19:31] 2026-01-10 22:19:28,970 | INFO     | [monitor] control thread has ended
[2026-01-10 17:19:31] 2026-01-10 22:19:30,006 [wrapper] ==== pilot stdout END ====
[2026-01-10 17:19:31] 2026-01-10 22:19:30,047 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 17:19:31] 2026-01-10 22:19:30,082 [wrapper] pilotpid: 2283674
[2026-01-10 17:19:31] 2026-01-10 22:19:30,113 [wrapper] Pilot exit status: 0
[2026-01-10 17:19:31] 2026-01-10 22:19:30,234 [wrapper] pandaids: 6963156024
[2026-01-10 17:19:31] 2026-01-10 22:19:30,970 [wrapper] cleanup supervisor_pilot 3514244 2283675
[2026-01-10 17:19:31] 2026-01-10 22:19:30,992 [wrapper] Test setup, not cleaning
[2026-01-10 17:19:31] 2026-01-10 22:19:31,016 [wrapper] apfmon messages muted
[2026-01-10 17:19:31] 2026-01-10 22:19:31,028 [wrapper] ==== wrapper stdout END ====
[2026-01-10 17:19:31] 2026-01-10 22:19:31,059 [wrapper] ==== wrapper stderr END ====
[2026-01-10 17:19:31]  *** Error codes and diagnostics ***
[2026-01-10 17:19:31]     "exeErrorCode": 0,
[2026-01-10 17:19:31]     "exeErrorDiag": "",
[2026-01-10 17:19:31]     "pilotErrorCode": 0,
[2026-01-10 17:19:31]     "pilotErrorDiag": "",
[2026-01-10 17:19:31]  *** Listing of results directory ***
[2026-01-10 17:19:31] total 447148
[2026-01-10 17:19:31] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 14:06 pilot3.tar.gz
[2026-01-10 17:19:31] -rwx------. 1 boincer umatlas     36322 Jan  8 14:06 runpilot2-wrapper.sh
[2026-01-10 17:19:31] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 14:07 queuedata.json
[2026-01-10 17:19:31] -rw-r--r--. 1 boincer umatlas       100 Jan 10 10:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 17:19:31] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 10:45 run_atlas
[2026-01-10 17:19:31] -rw-r--r--. 1 boincer umatlas       105 Jan 10 10:45 job.xml
[2026-01-10 17:19:31] -rw-r--r--. 2 boincer umatlas 227413248 Jan 10 10:45 EVNT.47898824._000889.pool.root.1
[2026-01-10 17:19:31] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 10:45 start_atlas.sh
[2026-01-10 17:19:31] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 10:45 shared
[2026-01-10 17:19:31] -rw-r--r--. 2 boincer umatlas    592390 Jan 10 10:45 input.tar.gz
[2026-01-10 17:19:31] -rw-r--r--. 1 boincer umatlas         0 Jan 10 10:45 boinc_lockfile
[2026-01-10 17:19:31] -rw-r--r--. 1 boincer umatlas      2518 Jan 10 10:45 pandaJob.out
[2026-01-10 17:19:31] -rw-------. 1 boincer umatlas        57 Jan 10 10:45 setup.sh.local
[2026-01-10 17:19:31] -rw-------. 1 boincer umatlas    989556 Jan 10 10:45 agis_schedconf.cvmfs.json
[2026-01-10 17:19:31] drwx------. 5 boincer umatlas      4096 Jan 10 10:45 pilot3
[2026-01-10 17:19:31] -rw-r--r--. 1 boincer umatlas      6842 Jan 10 17:10 init_data.xml
[2026-01-10 17:19:31] -rw-------. 1 boincer umatlas 219481821 Jan 10 17:16 HITS.47898826._031245.pool.root.1
[2026-01-10 17:19:31] -rw-r--r--. 1 boincer umatlas       531 Jan 10 17:16 boinc_task_state.xml
[2026-01-10 17:19:31] -rw-------. 1 boincer umatlas      1036 Jan 10 17:18 memory_monitor_summary.json
[2026-01-10 17:19:31] -rw-------. 1 boincer umatlas   1516240 Jan 10 17:18 agis_ddmendpoints.agis.ALL.json
[2026-01-10 17:19:31] -rw-------. 1 boincer umatlas    597282 Jan 10 17:18 log.47898826._031245.job.log.tgz.1
[2026-01-10 17:19:31] -rw-------. 1 boincer umatlas        95 Jan 10 17:18 pilot_heartbeat.json
[2026-01-10 17:19:31] -rw-------. 1 boincer umatlas      7814 Jan 10 17:18 heartbeat.json
[2026-01-10 17:19:31] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 17:19 boinc_mmap_file
[2026-01-10 17:19:31] -rw-r--r--. 1 boincer umatlas        28 Jan 10 17:19 wrapper_checkpoint.txt
[2026-01-10 17:19:31] -rw-------. 1 boincer umatlas       823 Jan 10 17:19 pilotlog.txt
[2026-01-10 17:19:31] -rw-------. 1 boincer umatlas   2945836 Jan 10 17:19 log.47898826._031245.job.log.1
[2026-01-10 17:19:31] -rw-------. 1 boincer umatlas       357 Jan 10 17:19 output.list
[2026-01-10 17:19:31] -rw-r--r--. 1 boincer umatlas       620 Jan 10 17:19 runtime_log
[2026-01-10 17:19:31] -rw-------. 1 boincer umatlas   3563520 Jan 10 17:19 result.tar.gz
[2026-01-10 17:19:31] -rw-------. 1 boincer umatlas       657 Jan 10 17:19 y3FKDmZWAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmD1fKDmU6kdXn.diag
[2026-01-10 17:19:31] -rw-r--r--. 1 boincer umatlas      9343 Jan 10 17:19 runtime_log.err
[2026-01-10 17:19:31] -rw-r--r--. 1 boincer umatlas     11780 Jan 10 17:19 stderr.txt
[2026-01-10 17:19:31] HITS file was successfully produced:
[2026-01-10 17:19:31] -rw-------. 1 boincer umatlas 219481821 Jan 10 17:16 shared/HITS.pool.root.1
[2026-01-10 17:19:31]  *** Contents of shared directory: ***
[2026-01-10 17:19:31] total 440504
[2026-01-10 17:19:31] -rw-r--r--. 2 boincer umatlas 227413248 Jan 10 10:45 ATLAS.root_0
[2026-01-10 17:19:31] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 10:45 start_atlas.sh
[2026-01-10 17:19:31] -rw-r--r--. 2 boincer umatlas    592390 Jan 10 10:45 input.tar.gz
[2026-01-10 17:19:31] -rw-------. 1 boincer umatlas 219481821 Jan 10 17:16 HITS.pool.root.1
[2026-01-10 17:19:31] -rw-------. 1 boincer umatlas   3563520 Jan 10 17:19 result.tar.gz
17:19:33 (2279743): run_atlas exited; CPU time 55746.863244
17:19:33 (2279743): called boinc_finish(0)

</stderr_txt>
]]>

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