Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
10:43:19 (3414110): wrapper (7.7.26015): starting
10:43:19 (3414110): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 10:43:19] Arguments: --nthreads 4
[2026-01-10 10:43:19] Threads: 4
[2026-01-10 10:43:19] Checking for CVMFS
[2026-01-10 10:43:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 10:43:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 10:43:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 10:43:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 10:43:20] 2.13.3.0 180034 4325 58760 154984 2 227 3055346 4096000 5443 130560 0 20765487 99.986 361345 2616 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-10 10:43:20] CVMFS is ok
[2026-01-10 10:43:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 10:43:20] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-10 10:43:20] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-10 10:43:20] Further information can be found at the LHC@home message board.
[2026-01-10 10:43:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 10:43:20] Checking for apptainer binary...
[2026-01-10 10:43:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 10:43:20] Running /usr/bin/apptainer --version
[2026-01-10 10:43:20] apptainer version 1.4.1
[2026-01-10 10:43:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 10:43:20] linux-7950X
[2026-01-10 10:43:20] apptainer works
[2026-01-10 10:43:20] Set ATHENA_PROC_NUMBER=4
[2026-01-10 10:43:20] Set ATHENA_CORE_NUMBER=4
[2026-01-10 10:43:20] Starting ATLAS job with PandaID=6965391067
[2026-01-10 10:43:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 12:47:02]  *** The last 200 lines of the pilot log: ***
[2026-01-10 12:47:02] 2026-01-10 17:46:28,363 | INFO     | this job has now completed (state=finished)
[2026-01-10 12:47:02] 2026-01-10 17:46:28,363 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 12:47:02] 2026-01-10 17:46:28,363 | INFO     | log transfer has been attempted: DONE
[2026-01-10 12:47:02] 2026-01-10 17:46:28,363 | INFO     | job 6965391067 has finished - writing final server update
[2026-01-10 12:47:02] 2026-01-10 17:46:28,363 | INFO     | total number of processed events: 400 (read)
[2026-01-10 12:47:02] 2026-01-10 17:46:28,363 | INFO     | executing command: lscpu
[2026-01-10 12:47:02] 2026-01-10 17:46:28,378 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 12:47:02] 2026-01-10 17:46:29,301 | INFO     | time since job start (7383s) is within the limit (349056.0s)
[2026-01-10 12:47:02] 2026-01-10 17:46:30,128 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 12:47:02] 2026-01-10 17:46:30,130 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4006.6208437499995
[2026-01-10 12:47:02] 2026-01-10 17:46:30,132 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6965391067/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 12:47:02] 2026-01-10 17:46:30,132 | INFO     | extracted standard info from prmon json
[2026-01-10 12:47:02] 2026-01-10 17:46:30,132 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 12:47:02] 2026-01-10 17:46:30,132 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 12:47:02] 2026-01-10 17:46:30,133 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 12:47:02] 2026-01-10 17:46:30,133 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 12:47:02] 2026-01-10 17:46:30,133 | INFO     | fitting pss+swap vs Time
[2026-01-10 12:47:02] 2026-01-10 17:46:30,133 | INFO     | sum of square deviations: 549294020.0
[2026-01-10 12:47:02] 2026-01-10 17:46:30,133 | INFO     | sum of deviations: 8136858503.0
[2026-01-10 12:47:02] 2026-01-10 17:46:30,134 | INFO     | mean x: 1768063485.0
[2026-01-10 12:47:02] 2026-01-10 17:46:30,134 | INFO     | mean y: 2337889.9008264462
[2026-01-10 12:47:02] 2026-01-10 17:46:30,134 | INFO     | intersect: -26188521427.602875
[2026-01-10 12:47:02] 2026-01-10 17:46:30,134 | INFO     | chi2: 1.0700911576286483
[2026-01-10 12:47:02] 2026-01-10 17:46:30,134 | INFO     | sum of square deviations: 483971865.0
[2026-01-10 12:47:02] 2026-01-10 17:46:30,134 | INFO     | sum of deviations: 7742458122.999999
[2026-01-10 12:47:02] 2026-01-10 17:46:30,134 | INFO     | mean x: 1768063332.5
[2026-01-10 12:47:02] 2026-01-10 17:46:30,134 | INFO     | mean y: 2336968.6379310344
[2026-01-10 12:47:02] 2026-01-10 17:46:30,134 | INFO     | intersect: -28282688051.75881
[2026-01-10 12:47:02] 2026-01-10 17:46:30,134 | INFO     | chi2: 1.0715259294493686
[2026-01-10 12:47:02] 2026-01-10 17:46:30,134 | INFO     | current chi2=1.0715259294493686 (change=-0.13407940159975493 %)
[2026-01-10 12:47:02] 2026-01-10 17:46:30,134 | INFO     | right removable region: 115
[2026-01-10 12:47:02] 2026-01-10 17:46:30,134 | INFO     | sum of square deviations: 483971865.0
[2026-01-10 12:47:02] 2026-01-10 17:46:30,134 | INFO     | sum of deviations: -2971132368.0
[2026-01-10 12:47:02] 2026-01-10 17:46:30,134 | INFO     | mean x: 1768063637.5
[2026-01-10 12:47:02] 2026-01-10 17:46:30,134 | INFO     | mean y: 2363136.2586206896
[2026-01-10 12:47:02] 2026-01-10 17:46:30,134 | INFO     | intersect: 10856612075.006474
[2026-01-10 12:47:02] 2026-01-10 17:46:30,134 | INFO     | chi2: 0.01057234369799657
[2026-01-10 12:47:02] 2026-01-10 17:46:30,134 | INFO     | current chi2=0.01057234369799657 (change=99.01201466598181 %)
[2026-01-10 12:47:02] 2026-01-10 17:46:30,134 | INFO     | sum of square deviations: 424045160.0
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | sum of deviations: -2713368815.9999995
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | mean x: 1768063790.0
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | mean y: 2362472.4504504506
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | intersect: 11315801711.999304
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | chi2: 0.010483598599672935
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | current chi2=0.010483598599672935 (change=0.8394079956032086 %)
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | left removable region: 20
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | sum of square deviations: 265828240.0
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | sum of deviations: -1003076618.9999999
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | mean x: 1768063912.0
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | mean y: 2357234.957894737
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | intersect: 6673971849.811731
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | chi2: 0.007703976034841016
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | current memory leak: -3.77 B/s (using 95 data points, chi2=0.01)
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | could have reported an average CPU frequency of 4254 MHz (8 samples)
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | ..............................
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | . Timing measurements:
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | . get job = 0 s
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | . initial setup = 1 s
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | . payload setup = 2 s
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | . stage-in = 0 s
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | . payload execution = 7358 s
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | . stage-out = 0 s
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | . log creation = 0 s
[2026-01-10 12:47:02] 2026-01-10 17:46:30,135 | INFO     | ..............................
[2026-01-10 12:47:02] 2026-01-10 17:46:30,160 | INFO     | 
[2026-01-10 12:47:02] 2026-01-10 17:46:30,160 | INFO     | job summary report
[2026-01-10 12:47:02] 2026-01-10 17:46:30,160 | INFO     | --------------------------------------------------
[2026-01-10 12:47:02] 2026-01-10 17:46:30,160 | INFO     | PanDA job id: 6965391067
[2026-01-10 12:47:02] 2026-01-10 17:46:30,160 | INFO     | task id: 48039250
[2026-01-10 12:47:02] 2026-01-10 17:46:30,161 | INFO     | errors: (none)
[2026-01-10 12:47:02] 2026-01-10 17:46:30,161 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 12:47:02] 2026-01-10 17:46:30,161 | INFO     | pilot state: finished 
[2026-01-10 12:47:02] 2026-01-10 17:46:30,161 | INFO     | transexitcode: 0
[2026-01-10 12:47:02] 2026-01-10 17:46:30,161 | INFO     | exeerrorcode: 0
[2026-01-10 12:47:02] 2026-01-10 17:46:30,161 | INFO     | exeerrordiag: 
[2026-01-10 12:47:02] 2026-01-10 17:46:30,161 | INFO     | exitcode: 0
[2026-01-10 12:47:02] 2026-01-10 17:46:30,161 | INFO     | exitmsg: OK
[2026-01-10 12:47:02] 2026-01-10 17:46:30,161 | INFO     | cpuconsumptiontime: 27778 s
[2026-01-10 12:47:02] 2026-01-10 17:46:30,161 | INFO     | nevents: 400
[2026-01-10 12:47:02] 2026-01-10 17:46:30,161 | INFO     | neventsw: 0
[2026-01-10 12:47:02] 2026-01-10 17:46:30,161 | INFO     | pid: 3430664
[2026-01-10 12:47:02] 2026-01-10 17:46:30,161 | INFO     | pgrp: 3430664
[2026-01-10 12:47:02] 2026-01-10 17:46:30,161 | INFO     | corecount: 4
[2026-01-10 12:47:02] 2026-01-10 17:46:30,161 | INFO     | event service: False
[2026-01-10 12:47:02] 2026-01-10 17:46:30,161 | INFO     | sizes: {0: 2283861, 1: 2284060, 3: 2284322, 11: 2284350, 7364: 2320863, 7366: 2320863, 7371: 2321213}
[2026-01-10 12:47:02] 2026-01-10 17:46:30,161 | INFO     | --------------------------------------------------
[2026-01-10 12:47:02] 2026-01-10 17:46:30,161 | INFO     | 
[2026-01-10 12:47:02] 2026-01-10 17:46:30,161 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2026-01-10 12:47:02] 2026-01-10 17:46:30,172 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 12:47:02] 2026-01-10 17:46:30,172 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 12:47:02] 2026-01-10 17:46:30,172 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 12:47:02] 2026-01-10 17:46:30,172 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 12:47:02] 2026-01-10 17:46:30,172 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 12:47:02] 2026-01-10 17:46:30,172 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 12:47:02] 2026-01-10 17:46:30,172 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 12:47:02] 2026-01-10 17:46:30,172 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 12:47:02] 2026-01-10 17:46:30,172 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 12:47:02] 2026-01-10 17:46:30,172 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 12:47:02] 2026-01-10 17:46:30,172 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 12:47:02] 2026-01-10 17:46:30,173 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 12:47:02] 2026-01-10 17:46:30,173 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 12:47:02] 2026-01-10 17:46:30,173 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 12:47:02] 2026-01-10 17:46:30,173 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 12:47:02] 2026-01-10 17:46:30,173 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 12:47:02] 2026-01-10 17:46:30,173 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 12:47:02] 2026-01-10 17:46:30,173 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 12:47:02] 2026-01-10 17:46:30,173 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 12:47:02] 2026-01-10 17:46:30,173 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 12:47:02] 2026-01-10 17:46:30,173 | INFO     | job 6965391067 has completed (purged errors)
[2026-01-10 12:47:02] 2026-01-10 17:46:30,173 | INFO     | overall cleanup function is called
[2026-01-10 12:47:02] 2026-01-10 17:46:31,179 | INFO     | --- collectZombieJob: --- 10, [3430664]
[2026-01-10 12:47:02] 2026-01-10 17:46:31,179 | INFO     | zombie collector waiting for pid 3430664
[2026-01-10 12:47:02] 2026-01-10 17:46:31,179 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 12:47:02] 2026-01-10 17:46:31,179 | INFO     | collected zombie processes
[2026-01-10 12:47:02] 2026-01-10 17:46:31,179 | INFO     | will attempt to kill all subprocesses of pid=3430664
[2026-01-10 12:47:02] 2026-01-10 17:46:31,250 | INFO     | process IDs to be killed: [3430664] (in reverse order)
[2026-01-10 12:47:02] 2026-01-10 17:46:31,286 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 12:47:02] 2026-01-10 17:46:31,286 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 12:47:02] 2026-01-10 17:46:31,290 | INFO     | did not find any defunct processes belonging to 3430664
[2026-01-10 12:47:02] 2026-01-10 17:46:31,293 | INFO     | did not find any defunct processes belonging to 3430664
[2026-01-10 12:47:02] 2026-01-10 17:46:31,293 | INFO     | ready for new job
[2026-01-10 12:47:02] 2026-01-10 17:46:31,293 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 12:47:02] 2026-01-10 17:46:31,294 | INFO     | ***************************************
[2026-01-10 12:47:02] 2026-01-10 17:46:31,294 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 12:47:02] 2026-01-10 17:46:31,294 | INFO     | ***************************************
[2026-01-10 12:47:02] 2026-01-10 17:46:31,294 | INFO     | 
[2026-01-10 12:47:02] 2026-01-10 17:46:31,295 | INFO     | architecture information:
[2026-01-10 12:47:02] 2026-01-10 17:46:31,295 | INFO     | executing command: cat /etc/os-release
[2026-01-10 12:47:02] 2026-01-10 17:46:31,305 | INFO     | cat /etc/os-release:
[2026-01-10 12:47:02] NAME="CentOS Linux"
[2026-01-10 12:47:02] VERSION="7 (Core)"
[2026-01-10 12:47:02] ID="centos"
[2026-01-10 12:47:02] ID_LIKE="rhel fedora"
[2026-01-10 12:47:02] VERSION_ID="7"
[2026-01-10 12:47:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 12:47:02] ANSI_COLOR="0;31"
[2026-01-10 12:47:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 12:47:02] HOME_URL="https://www.centos.org/"
[2026-01-10 12:47:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 12:47:02] 
[2026-01-10 12:47:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 12:47:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 12:47:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 12:47:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 12:47:02] 
[2026-01-10 12:47:02] 2026-01-10 17:46:31,305 | INFO     | ***************************************
[2026-01-10 12:47:02] 2026-01-10 17:46:31,807 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2026-01-10 12:47:02] 2026-01-10 17:46:31,818 | INFO     | sufficient remaining disk space (880680108032 B)
[2026-01-10 12:47:02] 2026-01-10 17:46:31,818 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 12:47:02] 2026-01-10 17:46:31,818 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 12:47:02] 2026-01-10 17:46:31,818 | INFO     | update_server=False
[2026-01-10 12:47:02] 2026-01-10 17:46:31,818 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 12:47:02] 2026-01-10 17:46:31,818 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 12:47:02] 2026-01-10 17:46:31,818 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:47:02] 2026-01-10 17:46:31,818 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:47:02] 2026-01-10 17:46:31,818 | INFO     | aborting loop
[2026-01-10 12:47:02] 2026-01-10 17:46:32,005 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 12:47:02] 2026-01-10 17:46:32,115 | INFO     | all payload control threads have been joined
[2026-01-10 12:47:02] 2026-01-10 17:46:32,518 | INFO     | all data control threads have been joined
[2026-01-10 12:47:02] 2026-01-10 17:46:32,823 | INFO     | [job] retrieve thread has finished
[2026-01-10 12:47:02] 2026-01-10 17:46:32,823 | INFO     | [job] queue monitor thread has finished
[2026-01-10 12:47:02] 2026-01-10 17:46:32,824 | INFO     | [job] job monitor thread has finished
[2026-01-10 12:47:02] 2026-01-10 17:46:32,871 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 12:47:02] 2026-01-10 17:46:33,120 | INFO     | [payload] control thread has finished
[2026-01-10 12:47:02] 2026-01-10 17:46:33,125 | INFO     | [job] validate thread has finished
[2026-01-10 12:47:02] 2026-01-10 17:46:33,156 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 12:47:02] 2026-01-10 17:46:33,412 | INFO     | [payload] failed_post thread has finished
[2026-01-10 12:47:02] 2026-01-10 17:46:33,426 | INFO     | all job control threads have been joined
[2026-01-10 12:47:02] 2026-01-10 17:46:33,520 | INFO     | [data] control thread has finished
[2026-01-10 12:47:02] 2026-01-10 17:46:33,612 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 12:47:02] 2026-01-10 17:46:33,837 | INFO     | [data] copytool_in thread has finished
[2026-01-10 12:47:02] 2026-01-10 17:46:34,010 | INFO     | [data] copytool_out thread has finished
[2026-01-10 12:47:02] 2026-01-10 17:46:34,257 | INFO     | [payload] validate_post thread has finished
[2026-01-10 12:47:02] 2026-01-10 17:46:34,431 | INFO     | [job] control thread has finished
[2026-01-10 12:47:02] 2026-01-10 17:46:35,824 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 12:47:02] 2026-01-10 17:46:38,651 | INFO     | [monitor] cgroup control has ended
[2026-01-10 12:47:02] 2026-01-10 17:46:42,001 | INFO     | job.realtimelogging is not enabled
[2026-01-10 12:47:02] 2026-01-10 17:46:43,006 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 12:47:02] 2026-01-10 17:46:43,986 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128955861329728)>', '<ExcThread(monitor, started 128955227031296)>']
[2026-01-10 12:47:02] 2026-01-10 17:46:49,011 | INFO     | all workflow threads have been joined
[2026-01-10 12:47:02] 2026-01-10 17:46:49,011 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 12:47:02] 2026-01-10 17:46:49,011 | INFO     | traces error code: 0
[2026-01-10 12:47:02] 2026-01-10 17:46:49,011 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 12:47:02] 2026-01-10 17:47:02,448 | INFO     | PID=3418022 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 12:47:02] 2026-01-10 17:47:02,448 | INFO     | .. there are 8 such processes running
[2026-01-10 12:47:02] 2026-01-10 17:47:02,449 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 12:47:02] 2026-01-10 17:47:02,449 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 12:47:02] 2026-01-10 17:47:02,449 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 12:47:02] 2026-01-10 17:47:02,449 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 12:47:02] 2026-01-10 17:47:02,449 | INFO     | [monitor] control thread has ended
[2026-01-10 12:47:02] 2026-01-10 17:47:02,502 [wrapper] ==== pilot stdout END ====
[2026-01-10 12:47:02] 2026-01-10 17:47:02,503 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 12:47:02] 2026-01-10 17:47:02,504 [wrapper] pilotpid: 3418022
[2026-01-10 12:47:02] 2026-01-10 17:47:02,505 [wrapper] Pilot exit status: 0
[2026-01-10 12:47:02] 2026-01-10 17:47:02,509 [wrapper] pandaids: 6965391067
[2026-01-10 12:47:02] 2026-01-10 17:47:02,529 [wrapper] cleanup supervisor_pilot 3608369 3418023
[2026-01-10 12:47:02] 2026-01-10 17:47:02,530 [wrapper] Test setup, not cleaning
[2026-01-10 12:47:02] 2026-01-10 17:47:02,531 [wrapper] apfmon messages muted
[2026-01-10 12:47:02] 2026-01-10 17:47:02,532 [wrapper] ==== wrapper stdout END ====
[2026-01-10 12:47:02] 2026-01-10 17:47:02,533 [wrapper] ==== wrapper stderr END ====
[2026-01-10 12:47:02]  *** Error codes and diagnostics ***
[2026-01-10 12:47:02]     "exeErrorCode": 0,
[2026-01-10 12:47:02]     "exeErrorDiag": "",
[2026-01-10 12:47:02]     "pilotErrorCode": 0,
[2026-01-10 12:47:02]     "pilotErrorDiag": "",
[2026-01-10 12:47:02]  *** Listing of results directory ***
[2026-01-10 12:47:02] total 1150728
[2026-01-10 12:47:02] -rw-r--r-- 1 boinc boinc      5112 Jan 10 08:29 queuedata.json
[2026-01-10 12:47:02] -rw-r--r-- 1 boinc boinc    579449 Jan 10 08:29 pilot3.tar.gz
[2026-01-10 12:47:02] -rwx------ 1 boinc boinc     36322 Jan 10 08:30 runpilot2-wrapper.sh
[2026-01-10 12:47:02] -rw-r--r-- 1 boinc boinc       100 Jan 10 10:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 12:47:02] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 10:43 run_atlas
[2026-01-10 12:47:02] -rw-r--r-- 1 boinc boinc       105 Jan 10 10:43 job.xml
[2026-01-10 12:47:02] -rw-r--r-- 2 boinc boinc 922705161 Jan 10 10:43 EVNT.48039248._000018.pool.root.1
[2026-01-10 12:47:02] -rw-r--r-- 2 boinc boinc     15847 Jan 10 10:43 start_atlas.sh
[2026-01-10 12:47:02] drwxrwx--x 2 boinc boinc      4096 Jan 10 10:43 shared
[2026-01-10 12:47:02] -rw-r--r-- 2 boinc boinc    592417 Jan 10 10:43 input.tar.gz
[2026-01-10 12:47:02] -rw-r--r-- 1 boinc boinc      9845 Jan 10 10:43 init_data.xml
[2026-01-10 12:47:02] -rw-r--r-- 1 boinc boinc         0 Jan 10 10:43 boinc_lockfile
[2026-01-10 12:47:02] -rw-r--r-- 1 boinc boinc      2591 Jan 10 10:43 pandaJob.out
[2026-01-10 12:47:02] -rw------- 1 boinc boinc    989556 Jan 10 10:43 agis_schedconf.cvmfs.json
[2026-01-10 12:47:02] -rw------- 1 boinc boinc   1516240 Jan 10 10:43 agis_ddmendpoints.agis.ALL.json
[2026-01-10 12:47:02] drwx------ 5 boinc boinc      4096 Jan 10 10:43 pilot3
[2026-01-10 12:47:02] -rw------- 1 boinc boinc 248897380 Jan 10 12:46 HITS.48039250._006871.pool.root.1
[2026-01-10 12:47:02] -rw-r--r-- 1 boinc boinc       530 Jan 10 12:46 boinc_task_state.xml
[2026-01-10 12:47:02] -rw------- 1 boinc boinc      1023 Jan 10 12:46 memory_monitor_summary.json
[2026-01-10 12:47:02] -rw------- 1 boinc boinc    328368 Jan 10 12:46 log.48039250._006871.job.log.tgz.1
[2026-01-10 12:47:02] -rw------- 1 boinc boinc      7738 Jan 10 12:46 heartbeat.json
[2026-01-10 12:47:02] -rw-r--r-- 1 boinc boinc        27 Jan 10 12:46 wrapper_checkpoint.txt
[2026-01-10 12:47:02] -rw-r--r-- 1 boinc boinc      8192 Jan 10 12:46 boinc_mmap_file
[2026-01-10 12:47:02] -rw------- 1 boinc boinc       822 Jan 10 12:47 pilotlog.txt
[2026-01-10 12:47:02] -rw------- 1 boinc boinc        95 Jan 10 12:47 pilot_heartbeat.json
[2026-01-10 12:47:02] -rw------- 1 boinc boinc   1086321 Jan 10 12:47 log.48039250._006871.job.log.1
[2026-01-10 12:47:02] -rw------- 1 boinc boinc       357 Jan 10 12:47 output.list
[2026-01-10 12:47:02] -rw-r--r-- 1 boinc boinc       620 Jan 10 12:47 runtime_log
[2026-01-10 12:47:02] -rw------- 1 boinc boinc   1433600 Jan 10 12:47 result.tar.gz
[2026-01-10 12:47:02] -rw-r--r-- 1 boinc boinc      8897 Jan 10 12:47 runtime_log.err
[2026-01-10 12:47:02] -rw------- 1 boinc boinc       644 Jan 10 12:47 2aJLDmLEoy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhumKDmaIUUNo.diag
[2026-01-10 12:47:02] -rw-r--r-- 1 boinc boinc     21351 Jan 10 12:47 stderr.txt
[2026-01-10 12:47:02] HITS file was successfully produced:
[2026-01-10 12:47:02] -rw------- 1 boinc boinc 248897380 Jan 10 12:46 shared/HITS.pool.root.1
[2026-01-10 12:47:02]  *** Contents of shared directory: ***
[2026-01-10 12:47:02] total 1146148
[2026-01-10 12:47:02] -rw-r--r-- 2 boinc boinc 922705161 Jan 10 10:43 ATLAS.root_0
[2026-01-10 12:47:02] -rw-r--r-- 2 boinc boinc     15847 Jan 10 10:43 start_atlas.sh
[2026-01-10 12:47:02] -rw-r--r-- 2 boinc boinc    592417 Jan 10 10:43 input.tar.gz
[2026-01-10 12:47:02] -rw------- 1 boinc boinc 248897380 Jan 10 12:46 HITS.pool.root.1
[2026-01-10 12:47:02] -rw------- 1 boinc boinc   1433600 Jan 10 12:47 result.tar.gz
12:47:03 (3414110): run_atlas exited; CPU time 27831.296059
12:47:03 (3414110): called boinc_finish(0)

</stderr_txt>
]]>

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