Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
08:36:29 (3193237): wrapper (7.7.26015): starting
08:36:29 (3193237): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 08:36:29] Arguments: --nthreads 4
[2026-01-10 08:36:29] Threads: 4
[2026-01-10 08:36:29] Checking for CVMFS
[2026-01-10 08:36:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:36:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:36:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:36:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:36:29] 2.13.3.0 180034 4198 57380 154981 1 227 3043092 4096001 2446 130560 0 20150528 99.985 357247 2598 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-10 08:36:29] CVMFS is ok
[2026-01-10 08:36:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:36:29] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-10 08:36:29] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-10 08:36:29] Further information can be found at the LHC@home message board.
[2026-01-10 08:36:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:36:29] Checking for apptainer binary...
[2026-01-10 08:36:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:36:29] Running /usr/bin/apptainer --version
[2026-01-10 08:36:29] apptainer version 1.4.1
[2026-01-10 08:36:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:36:29] linux-7950X
[2026-01-10 08:36:29] apptainer works
[2026-01-10 08:36:29] Set ATHENA_PROC_NUMBER=4
[2026-01-10 08:36:29] Set ATHENA_CORE_NUMBER=4
[2026-01-10 08:36:29] Starting ATLAS job with PandaID=6965391027
[2026-01-10 08:36:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 10:41:52]  *** The last 200 lines of the pilot log: ***
[2026-01-10 10:41:52] 2026-01-10 15:40:43,158 | INFO     | log transfer has been attempted: DONE
[2026-01-10 10:41:52] 2026-01-10 15:40:43,158 | INFO     | job 6965391027 has finished - writing final server update
[2026-01-10 10:41:52] 2026-01-10 15:40:43,158 | INFO     | total number of processed events: 400 (read)
[2026-01-10 10:41:52] 2026-01-10 15:40:43,158 | INFO     | executing command: lscpu
[2026-01-10 10:41:52] 2026-01-10 15:40:43,180 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 10:41:52] 2026-01-10 15:40:43,580 | INFO     | time since job start (7449s) is within the limit (349056.0s)
[2026-01-10 10:41:52] 2026-01-10 15:40:43,935 | INFO     | monitor loop #558: job 0:6965391027 is in state 'finished'
[2026-01-10 10:41:52] 2026-01-10 15:40:43,935 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:41:52] 2026-01-10 15:40:45,360 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 10:41:52] 2026-01-10 15:40:45,362 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4263.256656250001
[2026-01-10 10:41:52] 2026-01-10 15:40:45,365 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6965391027/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 10:41:52] 2026-01-10 15:40:45,366 | INFO     | extracted standard info from prmon json
[2026-01-10 10:41:52] 2026-01-10 15:40:45,366 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 10:41:52] 2026-01-10 15:40:45,366 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 10:41:52] 2026-01-10 15:40:45,366 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 10:41:52] 2026-01-10 15:40:45,366 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 10:41:52] 2026-01-10 15:40:45,367 | INFO     | fitting pss+swap vs Time
[2026-01-10 10:41:52] 2026-01-10 15:40:45,367 | INFO     | sum of square deviations: 563026370.5
[2026-01-10 10:41:52] 2026-01-10 15:40:45,367 | INFO     | sum of deviations: 7285013724.5
[2026-01-10 10:41:52] 2026-01-10 15:40:45,367 | INFO     | mean x: 1768055900.5
[2026-01-10 10:41:52] 2026-01-10 15:40:45,367 | INFO     | mean y: 2340994.4836065574
[2026-01-10 10:41:52] 2026-01-10 15:40:45,367 | INFO     | intersect: -22874583028.430706
[2026-01-10 10:41:52] 2026-01-10 15:40:45,368 | INFO     | chi2: 1.1057589167063564
[2026-01-10 10:41:52] 2026-01-10 15:40:45,368 | INFO     | sum of square deviations: 496597218.0
[2026-01-10 10:41:52] 2026-01-10 15:40:45,368 | INFO     | sum of deviations: 7050536526.000001
[2026-01-10 10:41:52] 2026-01-10 15:40:45,368 | INFO     | mean x: 1768055748.0
[2026-01-10 10:41:52] 2026-01-10 15:40:45,368 | INFO     | mean y: 2340455.863247863
[2026-01-10 10:41:52] 2026-01-10 15:40:45,368 | INFO     | intersect: -25099978243.147778
[2026-01-10 10:41:52] 2026-01-10 15:40:45,368 | INFO     | chi2: 1.1072664795833245
[2026-01-10 10:41:52] 2026-01-10 15:40:45,368 | INFO     | current chi2=1.1072664795833245 (change=-0.13633739273462422 %)
[2026-01-10 10:41:52] 2026-01-10 15:40:45,368 | INFO     | right removable region: 116
[2026-01-10 10:41:52] 2026-01-10 15:40:45,368 | INFO     | sum of square deviations: 496597218.0
[2026-01-10 10:41:52] 2026-01-10 15:40:45,369 | INFO     | sum of deviations: -4014217667.0
[2026-01-10 10:41:52] 2026-01-10 15:40:45,369 | INFO     | mean x: 1768056053.0
[2026-01-10 10:41:52] 2026-01-10 15:40:45,369 | INFO     | mean y: 2366207.888888889
[2026-01-10 10:41:52] 2026-01-10 15:40:45,369 | INFO     | intersect: 14294354940.292316
[2026-01-10 10:41:52] 2026-01-10 15:40:45,369 | INFO     | chi2: 0.007510070287993581
[2026-01-10 10:41:52] 2026-01-10 15:40:45,369 | INFO     | current chi2=0.007510070287993581 (change=99.3208220910971 %)
[2026-01-10 10:41:52] 2026-01-10 15:40:45,369 | INFO     | sum of square deviations: 435610028.0
[2026-01-10 10:41:52] 2026-01-10 15:40:45,369 | INFO     | sum of deviations: -3727660650.9999995
[2026-01-10 10:41:52] 2026-01-10 15:40:45,369 | INFO     | mean x: 1768056205.5
[2026-01-10 10:41:52] 2026-01-10 15:40:45,369 | INFO     | mean y: 2365485.1785714286
[2026-01-10 10:41:52] 2026-01-10 15:40:45,369 | INFO     | intersect: 15132213565.716146
[2026-01-10 10:41:52] 2026-01-10 15:40:45,369 | INFO     | chi2: 0.007337988457943646
[2026-01-10 10:41:52] 2026-01-10 15:40:45,369 | INFO     | current chi2=0.007337988457943646 (change=2.2913477963720794 %)
[2026-01-10 10:41:52] 2026-01-10 15:40:45,369 | INFO     | left removable region: 20
[2026-01-10 10:41:52] 2026-01-10 15:40:45,369 | INFO     | sum of square deviations: 274312120.0
[2026-01-10 10:41:52] 2026-01-10 15:40:45,370 | INFO     | sum of deviations: -2348084254.5000005
[2026-01-10 10:41:52] 2026-01-10 15:40:45,370 | INFO     | mean x: 1768056327.5
[2026-01-10 10:41:52] 2026-01-10 15:40:45,370 | INFO     | mean y: 2362490.8020833335
[2026-01-10 10:41:52] 2026-01-10 15:40:45,370 | INFO     | intersect: 15136747452.253464
[2026-01-10 10:41:52] 2026-01-10 15:40:45,370 | INFO     | chi2: 0.006851791522490385
[2026-01-10 10:41:52] 2026-01-10 15:40:45,370 | INFO     | current memory leak: -8.56 B/s (using 96 data points, chi2=0.01)
[2026-01-10 10:41:52] 2026-01-10 15:40:45,370 | INFO     | could have reported an average CPU frequency of 4021 MHz (8 samples)
[2026-01-10 10:41:52] 2026-01-10 15:40:45,370 | INFO     | ..............................
[2026-01-10 10:41:52] 2026-01-10 15:40:45,370 | INFO     | . Timing measurements:
[2026-01-10 10:41:52] 2026-01-10 15:40:45,370 | INFO     | . get job = 0 s
[2026-01-10 10:41:52] 2026-01-10 15:40:45,370 | INFO     | . initial setup = 1 s
[2026-01-10 10:41:52] 2026-01-10 15:40:45,370 | INFO     | . payload setup = 1 s
[2026-01-10 10:41:52] 2026-01-10 15:40:45,370 | INFO     | . stage-in = 0 s
[2026-01-10 10:41:52] 2026-01-10 15:40:45,370 | INFO     | . payload execution = 7425 s
[2026-01-10 10:41:52] 2026-01-10 15:40:45,370 | INFO     | . stage-out = 0 s
[2026-01-10 10:41:52] 2026-01-10 15:40:45,370 | INFO     | . log creation = 0 s
[2026-01-10 10:41:52] 2026-01-10 15:40:45,370 | INFO     | ..............................
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | 
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | job summary report
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | --------------------------------------------------
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | PanDA job id: 6965391027
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | task id: 48039250
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | errors: (none)
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | pilot state: finished 
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | transexitcode: 0
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | exeerrorcode: 0
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | exeerrordiag: 
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | exitcode: 0
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | exitmsg: OK
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | cpuconsumptiontime: 27725 s
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | nevents: 400
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | neventsw: 0
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | pid: 3203774
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | pgrp: 3203774
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | corecount: 4
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | event service: False
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | sizes: {0: 2283803, 1: 2284058, 2: 2284320, 11: 2284348, 7430: 2320888, 7434: 2320888, 7439: 2321210}
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | --------------------------------------------------
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | 
[2026-01-10 10:41:52] 2026-01-10 15:40:45,415 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-01-10 10:41:52] 2026-01-10 15:40:45,427 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 10:41:52] 2026-01-10 15:40:45,428 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 10:41:52] 2026-01-10 15:40:45,428 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 10:41:52] 2026-01-10 15:40:45,428 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 10:41:52] 2026-01-10 15:40:45,428 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 10:41:52] 2026-01-10 15:40:45,428 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 10:41:52] 2026-01-10 15:40:45,428 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 10:41:52] 2026-01-10 15:40:45,428 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 10:41:52] 2026-01-10 15:40:45,428 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 10:41:52] 2026-01-10 15:40:45,428 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 10:41:52] 2026-01-10 15:40:45,428 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 10:41:52] 2026-01-10 15:40:45,428 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 10:41:52] 2026-01-10 15:40:45,428 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 10:41:52] 2026-01-10 15:40:45,428 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 10:41:52] 2026-01-10 15:40:45,428 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 10:41:52] 2026-01-10 15:40:45,428 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 10:41:52] 2026-01-10 15:40:45,428 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 10:41:52] 2026-01-10 15:40:45,428 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 10:41:52] 2026-01-10 15:40:45,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 10:41:52] 2026-01-10 15:40:45,428 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 10:41:52] 2026-01-10 15:40:45,428 | INFO     | job 6965391027 has completed (purged errors)
[2026-01-10 10:41:52] 2026-01-10 15:40:45,428 | INFO     | overall cleanup function is called
[2026-01-10 10:41:52] 2026-01-10 15:40:46,432 | INFO     | --- collectZombieJob: --- 10, [3203774]
[2026-01-10 10:41:52] 2026-01-10 15:40:46,432 | INFO     | zombie collector waiting for pid 3203774
[2026-01-10 10:41:52] 2026-01-10 15:40:46,432 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 10:41:52] 2026-01-10 15:40:46,432 | INFO     | collected zombie processes
[2026-01-10 10:41:52] 2026-01-10 15:40:46,432 | INFO     | will attempt to kill all subprocesses of pid=3203774
[2026-01-10 10:41:52] 2026-01-10 15:40:46,527 | INFO     | process IDs to be killed: [3203774] (in reverse order)
[2026-01-10 10:41:52] 2026-01-10 15:40:46,570 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 10:41:52] 2026-01-10 15:40:46,570 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 10:41:52] 2026-01-10 15:40:46,574 | INFO     | did not find any defunct processes belonging to 3203774
[2026-01-10 10:41:52] 2026-01-10 15:40:46,577 | INFO     | did not find any defunct processes belonging to 3203774
[2026-01-10 10:41:52] 2026-01-10 15:40:46,577 | INFO     | ready for new job
[2026-01-10 10:41:52] 2026-01-10 15:40:46,577 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 10:41:52] 2026-01-10 15:40:46,578 | INFO     | ***************************************
[2026-01-10 10:41:52] 2026-01-10 15:40:46,579 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 10:41:52] 2026-01-10 15:40:46,579 | INFO     | ***************************************
[2026-01-10 10:41:52] 2026-01-10 15:40:46,579 | INFO     | 
[2026-01-10 10:41:52] 2026-01-10 15:40:46,580 | INFO     | architecture information:
[2026-01-10 10:41:52] 2026-01-10 15:40:46,580 | INFO     | executing command: cat /etc/os-release
[2026-01-10 10:41:52] 2026-01-10 15:40:46,589 | INFO     | cat /etc/os-release:
[2026-01-10 10:41:52] NAME="CentOS Linux"
[2026-01-10 10:41:52] VERSION="7 (Core)"
[2026-01-10 10:41:52] ID="centos"
[2026-01-10 10:41:52] ID_LIKE="rhel fedora"
[2026-01-10 10:41:52] VERSION_ID="7"
[2026-01-10 10:41:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 10:41:52] ANSI_COLOR="0;31"
[2026-01-10 10:41:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 10:41:52] HOME_URL="https://www.centos.org/"
[2026-01-10 10:41:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 10:41:52] 
[2026-01-10 10:41:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 10:41:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 10:41:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 10:41:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 10:41:52] 
[2026-01-10 10:41:52] 2026-01-10 15:40:46,589 | INFO     | ***************************************
[2026-01-10 10:41:52] 2026-01-10 15:40:47,092 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-01-10 10:41:52] 2026-01-10 15:40:47,103 | INFO     | sufficient remaining disk space (872034598912 B)
[2026-01-10 10:41:52] 2026-01-10 15:40:47,103 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 10:41:52] 2026-01-10 15:40:47,103 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 10:41:52] 2026-01-10 15:40:47,103 | INFO     | update_server=False
[2026-01-10 10:41:52] 2026-01-10 15:40:47,103 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 10:41:52] 2026-01-10 15:40:47,103 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:41:52] 2026-01-10 15:40:47,103 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 10:41:52] 2026-01-10 15:40:47,339 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 10:41:52] 2026-01-10 15:40:47,361 | INFO     | all payload control threads have been joined
[2026-01-10 10:41:52] 2026-01-10 15:40:47,443 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:41:52] 2026-01-10 15:40:47,443 | INFO     | aborting loop
[2026-01-10 10:41:52] 2026-01-10 15:40:47,473 | INFO     | all data control threads have been joined
[2026-01-10 10:41:52] 2026-01-10 15:40:48,104 | INFO     | [job] queue monitor thread has finished
[2026-01-10 10:41:52] 2026-01-10 15:40:48,105 | INFO     | [job] retrieve thread has finished
[2026-01-10 10:41:52] 2026-01-10 15:40:48,171 | INFO     | all job control threads have been joined
[2026-01-10 10:41:52] 2026-01-10 15:40:48,365 | INFO     | [payload] control thread has finished
[2026-01-10 10:41:52] 2026-01-10 15:40:48,425 | INFO     | [job] validate thread has finished
[2026-01-10 10:41:52] 2026-01-10 15:40:48,448 | INFO     | [job] job monitor thread has finished
[2026-01-10 10:41:52] 2026-01-10 15:40:48,478 | INFO     | [data] control thread has finished
[2026-01-10 10:41:52] 2026-01-10 15:40:48,568 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 10:41:52] 2026-01-10 15:40:48,579 | INFO     | [payload] validate_post thread has finished
[2026-01-10 10:41:52] 2026-01-10 15:40:48,935 | INFO     | [payload] failed_post thread has finished
[2026-01-10 10:41:52] 2026-01-10 15:40:49,005 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 10:41:52] 2026-01-10 15:40:49,046 | INFO     | [data] copytool_in thread has finished
[2026-01-10 10:41:52] 2026-01-10 15:40:49,176 | INFO     | [job] control thread has finished
[2026-01-10 10:41:52] 2026-01-10 15:40:49,336 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 10:41:52] 2026-01-10 15:40:49,344 | INFO     | [data] copytool_out thread has finished
[2026-01-10 10:41:52] 2026-01-10 15:40:51,109 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 10:41:52] 2026-01-10 15:40:57,389 | INFO     | job.realtimelogging is not enabled
[2026-01-10 10:41:52] 2026-01-10 15:40:58,394 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 10:41:52] 2026-01-10 15:41:16,757 | INFO     | PID=3197098 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 10:41:52] 2026-01-10 15:41:16,757 | INFO     | .. there are 8 such processes running
[2026-01-10 10:41:52] 2026-01-10 15:41:16,758 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 10:41:52] 2026-01-10 15:41:16,758 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 10:41:52] 2026-01-10 15:41:16,758 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 10:41:52] 2026-01-10 15:41:46,004 | INFO     | [monitor] cgroup control has ended
[2026-01-10 10:41:52] 2026-01-10 15:41:47,824 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130511952992064)>', '<ExcThread(monitor, started 130511171221248)>']
[2026-01-10 10:41:52] 2026-01-10 15:41:47,887 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 10:41:52] 2026-01-10 15:41:47,887 | INFO     | [monitor] control thread has ended
[2026-01-10 10:41:52] 2026-01-10 15:41:52,834 | INFO     | all workflow threads have been joined
[2026-01-10 10:41:52] 2026-01-10 15:41:52,834 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 10:41:52] 2026-01-10 15:41:52,834 | INFO     | traces error code: 0
[2026-01-10 10:41:52] 2026-01-10 15:41:52,834 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 10:41:52] 2026-01-10 15:41:52,897 [wrapper] ==== pilot stdout END ====
[2026-01-10 10:41:52] 2026-01-10 15:41:52,898 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 10:41:52] 2026-01-10 15:41:52,900 [wrapper] pilotpid: 3197098
[2026-01-10 10:41:52] 2026-01-10 15:41:52,901 [wrapper] Pilot exit status: 0
[2026-01-10 10:41:52] 2026-01-10 15:41:52,907 [wrapper] pandaids: 6965391027
[2026-01-10 10:41:52] 2026-01-10 15:41:52,932 [wrapper] cleanup supervisor_pilot 3353847 3197099
[2026-01-10 10:41:52] 2026-01-10 15:41:52,934 [wrapper] Test setup, not cleaning
[2026-01-10 10:41:52] 2026-01-10 15:41:52,935 [wrapper] apfmon messages muted
[2026-01-10 10:41:52] 2026-01-10 15:41:52,936 [wrapper] ==== wrapper stdout END ====
[2026-01-10 10:41:52] 2026-01-10 15:41:52,938 [wrapper] ==== wrapper stderr END ====
[2026-01-10 10:41:52]  *** Error codes and diagnostics ***
[2026-01-10 10:41:52]     "exeErrorCode": 0,
[2026-01-10 10:41:52]     "exeErrorDiag": "",
[2026-01-10 10:41:52]     "pilotErrorCode": 0,
[2026-01-10 10:41:52]     "pilotErrorDiag": "",
[2026-01-10 10:41:52]  *** Listing of results directory ***
[2026-01-10 10:41:52] total 1169968
[2026-01-10 10:41:52] -rw-r--r-- 1 boinc boinc      5112 Jan 10 08:29 queuedata.json
[2026-01-10 10:41:52] -rw-r--r-- 1 boinc boinc    579449 Jan 10 08:29 pilot3.tar.gz
[2026-01-10 10:41:52] -rwx------ 1 boinc boinc     36322 Jan 10 08:30 runpilot2-wrapper.sh
[2026-01-10 10:41:52] -rw-r--r-- 1 boinc boinc       100 Jan 10 08:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 10:41:52] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 08:36 run_atlas
[2026-01-10 10:41:52] -rw-r--r-- 1 boinc boinc       105 Jan 10 08:36 job.xml
[2026-01-10 10:41:52] -rw-r--r-- 1 boinc boinc      9845 Jan 10 08:36 init_data.xml
[2026-01-10 10:41:52] -rw-r--r-- 2 boinc boinc 934720811 Jan 10 08:36 EVNT.48039248._000017.pool.root.1
[2026-01-10 10:41:52] -rw-r--r-- 2 boinc boinc     15847 Jan 10 08:36 start_atlas.sh
[2026-01-10 10:41:52] drwxrwx--x 2 boinc boinc      4096 Jan 10 08:36 shared
[2026-01-10 10:41:52] -rw-r--r-- 2 boinc boinc    592418 Jan 10 08:36 input.tar.gz
[2026-01-10 10:41:52] -rw-r--r-- 1 boinc boinc         0 Jan 10 08:36 boinc_lockfile
[2026-01-10 10:41:52] -rw-r--r-- 1 boinc boinc      2590 Jan 10 08:36 pandaJob.out
[2026-01-10 10:41:52] -rw------- 1 boinc boinc    989556 Jan 10 08:36 agis_schedconf.cvmfs.json
[2026-01-10 10:41:52] -rw------- 1 boinc boinc   1516240 Jan 10 08:36 agis_ddmendpoints.agis.ALL.json
[2026-01-10 10:41:52] drwx------ 5 boinc boinc      4096 Jan 10 08:36 pilot3
[2026-01-10 10:41:52] -rw-r--r-- 1 boinc boinc       530 Jan 10 10:40 boinc_task_state.xml
[2026-01-10 10:41:52] -rw------- 1 boinc boinc 256601913 Jan 10 10:40 HITS.48039250._006831.pool.root.1
[2026-01-10 10:41:52] -rw------- 1 boinc boinc      1028 Jan 10 10:40 memory_monitor_summary.json
[2026-01-10 10:41:52] -rw------- 1 boinc boinc    308528 Jan 10 10:40 log.48039250._006831.job.log.tgz.1
[2026-01-10 10:41:52] -rw------- 1 boinc boinc      7744 Jan 10 10:40 heartbeat.json
[2026-01-10 10:41:52] -rw------- 1 boinc boinc        95 Jan 10 10:41 pilot_heartbeat.json
[2026-01-10 10:41:52] -rw-r--r-- 1 boinc boinc      8192 Jan 10 10:41 boinc_mmap_file
[2026-01-10 10:41:52] -rw-r--r-- 1 boinc boinc        27 Jan 10 10:41 wrapper_checkpoint.txt
[2026-01-10 10:41:52] -rw------- 1 boinc boinc      4903 Jan 10 10:41 pilotlog.txt
[2026-01-10 10:41:52] -rw------- 1 boinc boinc   1093243 Jan 10 10:41 log.48039250._006831.job.log.1
[2026-01-10 10:41:52] -rw------- 1 boinc boinc       357 Jan 10 10:41 output.list
[2026-01-10 10:41:52] -rw-r--r-- 1 boinc boinc       620 Jan 10 10:41 runtime_log
[2026-01-10 10:41:52] -rw------- 1 boinc boinc   1423360 Jan 10 10:41 result.tar.gz
[2026-01-10 10:41:52] -rw------- 1 boinc boinc       645 Jan 10 10:41 sqWKDmLEoy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4tmKDmZNcBYm.diag
[2026-01-10 10:41:52] -rw-r--r-- 1 boinc boinc      8897 Jan 10 10:41 runtime_log.err
[2026-01-10 10:41:52] -rw-r--r-- 1 boinc boinc     21370 Jan 10 10:41 stderr.txt
[2026-01-10 10:41:52] HITS file was successfully produced:
[2026-01-10 10:41:52] -rw------- 1 boinc boinc 256601913 Jan 10 10:40 shared/HITS.pool.root.1
[2026-01-10 10:41:52]  *** Contents of shared directory: ***
[2026-01-10 10:41:52] total 1165400
[2026-01-10 10:41:52] -rw-r--r-- 2 boinc boinc 934720811 Jan 10 08:36 ATLAS.root_0
[2026-01-10 10:41:52] -rw-r--r-- 2 boinc boinc     15847 Jan 10 08:36 start_atlas.sh
[2026-01-10 10:41:52] -rw-r--r-- 2 boinc boinc    592418 Jan 10 08:36 input.tar.gz
[2026-01-10 10:41:52] -rw------- 1 boinc boinc 256601913 Jan 10 10:40 HITS.pool.root.1
[2026-01-10 10:41:52] -rw------- 1 boinc boinc   1423360 Jan 10 10:41 result.tar.gz
10:41:54 (3193237): run_atlas exited; CPU time 27778.932340
10:41:54 (3193237): called boinc_finish(0)

</stderr_txt>
]]>

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