Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
12:45:09 (3612697): wrapper (7.7.26015): starting
12:45:09 (3612697): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 12:45:09] Arguments: --nthreads 4
[2026-01-10 12:45:09] Threads: 4
[2026-01-10 12:45:09] Checking for CVMFS
[2026-01-10 12:45:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 12:45:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 12:45:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 12:45:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 12:45:09] 2.13.3.0 180034 4447 56812 154987 0 253 3075429 4096001 6454 130560 0 21350678 99.986 365599 2619 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-10 12:45:09] CVMFS is ok
[2026-01-10 12:45:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 12:45:09] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-10 12:45:09] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-10 12:45:09] Further information can be found at the LHC@home message board.
[2026-01-10 12:45:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 12:45:09] Checking for apptainer binary...
[2026-01-10 12:45:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 12:45:09] Running /usr/bin/apptainer --version
[2026-01-10 12:45:09] apptainer version 1.4.1
[2026-01-10 12:45:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 12:45:09] linux-7950X
[2026-01-10 12:45:09] apptainer works
[2026-01-10 12:45:09] Set ATHENA_PROC_NUMBER=4
[2026-01-10 12:45:09] Set ATHENA_CORE_NUMBER=4
[2026-01-10 12:45:09] Starting ATLAS job with PandaID=6965390988
[2026-01-10 12:45:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 14:22:55]  *** The last 200 lines of the pilot log: ***
[2026-01-10 14:22:55]  filetype=log
[2026-01-10 14:22:55]  guid=925bbc43-4ce0-4b4e-86e6-c4a64fbd1718
[2026-01-10 14:22:55]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-10 14:22:55]  is_altstaged=None
[2026-01-10 14:22:55]  is_tar=False
[2026-01-10 14:22:55]  lfn=log.48039250._006792.job.log.tgz.1
[2026-01-10 14:22:55]  mtime=0
[2026-01-10 14:22:55]  protocol_id=None
[2026-01-10 14:22:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 14:22:55]  replicas=None
[2026-01-10 14:22:55]  scope=mc23_13p6TeV
[2026-01-10 14:22:55]  status=None
[2026-01-10 14:22:55]  status_code=0
[2026-01-10 14:22:55]  storage_token=
[2026-01-10 14:22:55]  surl=/var/lib/boinc-client/slots/5/PanDA_Pilot-6965390988/log.48039250._006792.job.log.tgz.1
[2026-01-10 14:22:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6a/24/log.48039250._006792.job.log.tgz.1
[2026-01-10 14:22:55]  workdir=None
[2026-01-10 14:22:55] ]
[2026-01-10 14:22:55] 2026-01-10 19:22:21,444 | INFO     | transferring file log.48039250._006792.job.log.tgz.1 from /var/lib/boinc-client/slots/5/PanDA_Pilot-6965390988/log.48039250._006792.job.log.tgz.1 to /var/lib/boinc
[2026-01-10 14:22:55] 2026-01-10 19:22:21,444 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/5/PanDA_Pilot-6965390988/log.48039250._006792.job.log.tgz.1 /var/lib/boinc-client/slots/5/log.480392
[2026-01-10 14:22:55] 2026-01-10 19:22:21,452 | INFO     | adding to output.list: log.48039250._006792.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6a/24/log.48039250._006792.job.log.tg
[2026-01-10 14:22:55] 2026-01-10 19:22:21,452 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 14:22:55] 2026-01-10 19:22:21,452 | INFO     | summary of transferred files:
[2026-01-10 14:22:55] 2026-01-10 19:22:21,452 | INFO     |  -- lfn=log.48039250._006792.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 14:22:55] 2026-01-10 19:22:21,452 | INFO     | stage-out finished correctly
[2026-01-10 14:22:55] 2026-01-10 19:22:21,475 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 14:22:55] 2026-01-10 19:22:22,014 | INFO     | job 6965390988 has state=finished
[2026-01-10 14:22:55] 2026-01-10 19:22:22,014 | INFO     | preparing for final server update for job 6965390988 in state='finished'
[2026-01-10 14:22:55] 2026-01-10 19:22:22,014 | INFO     | this job has now completed (state=finished)
[2026-01-10 14:22:55] 2026-01-10 19:22:22,014 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 14:22:55] 2026-01-10 19:22:22,014 | INFO     | log transfer has been attempted: DONE
[2026-01-10 14:22:55] 2026-01-10 19:22:22,014 | INFO     | job 6965390988 has finished - writing final server update
[2026-01-10 14:22:55] 2026-01-10 19:22:22,015 | INFO     | total number of processed events: 400 (read)
[2026-01-10 14:22:55] 2026-01-10 19:22:22,015 | INFO     | executing command: lscpu
[2026-01-10 14:22:55] 2026-01-10 19:22:22,028 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 14:22:55] 2026-01-10 19:22:22,261 | INFO     | time since job start (5826s) is within the limit (349056.0s)
[2026-01-10 14:22:55] 2026-01-10 19:22:22,278 | INFO     | monitor loop #445: job 0:6965390988 is in state 'finished'
[2026-01-10 14:22:55] 2026-01-10 19:22:22,278 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 14:22:55] 2026-01-10 19:22:23,370 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 14:22:55] 2026-01-10 19:22:23,373 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3718.3838124999997
[2026-01-10 14:22:55] 2026-01-10 19:22:23,375 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6965390988/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 14:22:55] 2026-01-10 19:22:23,376 | INFO     | extracted standard info from prmon json
[2026-01-10 14:22:55] 2026-01-10 19:22:23,376 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 14:22:55] 2026-01-10 19:22:23,376 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 14:22:55] 2026-01-10 19:22:23,376 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 14:22:55] 2026-01-10 19:22:23,376 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 14:22:55] 2026-01-10 19:22:23,376 | INFO     | fitting pss+swap vs Time
[2026-01-10 14:22:55] 2026-01-10 19:22:23,376 | INFO     | sum of square deviations: 218571540.0
[2026-01-10 14:22:55] 2026-01-10 19:22:23,377 | INFO     | sum of deviations: -2697220652.0
[2026-01-10 14:22:55] 2026-01-10 19:22:23,377 | INFO     | mean x: 1768070124.0
[2026-01-10 14:22:55] 2026-01-10 19:22:23,377 | INFO     | mean y: 2376515.2808988765
[2026-01-10 14:22:55] 2026-01-10 19:22:23,377 | INFO     | intersect: 21820748900.985832
[2026-01-10 14:22:55] 2026-01-10 19:22:23,377 | INFO     | chi2: 0.008224375637927802
[2026-01-10 14:22:55] 2026-01-10 19:22:23,377 | INFO     | current memory leak: -12.34 B/s (using 89 data points, chi2=0.01)
[2026-01-10 14:22:55] 2026-01-10 19:22:23,377 | INFO     | could have reported an average CPU frequency of 4257 MHz (7 samples)
[2026-01-10 14:22:55] 2026-01-10 19:22:23,377 | INFO     | ..............................
[2026-01-10 14:22:55] 2026-01-10 19:22:23,377 | INFO     | . Timing measurements:
[2026-01-10 14:22:55] 2026-01-10 19:22:23,377 | INFO     | . get job = 0 s
[2026-01-10 14:22:55] 2026-01-10 19:22:23,377 | INFO     | . initial setup = 1 s
[2026-01-10 14:22:55] 2026-01-10 19:22:23,377 | INFO     | . payload setup = 3 s
[2026-01-10 14:22:55] 2026-01-10 19:22:23,377 | INFO     | . stage-in = 0 s
[2026-01-10 14:22:55] 2026-01-10 19:22:23,377 | INFO     | . payload execution = 5804 s
[2026-01-10 14:22:55] 2026-01-10 19:22:23,377 | INFO     | . stage-out = 0 s
[2026-01-10 14:22:55] 2026-01-10 19:22:23,377 | INFO     | . log creation = 0 s
[2026-01-10 14:22:55] 2026-01-10 19:22:23,377 | INFO     | ..............................
[2026-01-10 14:22:55] 2026-01-10 19:22:23,403 | INFO     | 
[2026-01-10 14:22:55] 2026-01-10 19:22:23,403 | INFO     | job summary report
[2026-01-10 14:22:55] 2026-01-10 19:22:23,403 | INFO     | --------------------------------------------------
[2026-01-10 14:22:55] 2026-01-10 19:22:23,403 | INFO     | PanDA job id: 6965390988
[2026-01-10 14:22:55] 2026-01-10 19:22:23,403 | INFO     | task id: 48039250
[2026-01-10 14:22:55] 2026-01-10 19:22:23,403 | INFO     | errors: (none)
[2026-01-10 14:22:55] 2026-01-10 19:22:23,403 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 14:22:55] 2026-01-10 19:22:23,403 | INFO     | pilot state: finished 
[2026-01-10 14:22:55] 2026-01-10 19:22:23,403 | INFO     | transexitcode: 0
[2026-01-10 14:22:55] 2026-01-10 19:22:23,403 | INFO     | exeerrorcode: 0
[2026-01-10 14:22:55] 2026-01-10 19:22:23,403 | INFO     | exeerrordiag: 
[2026-01-10 14:22:55] 2026-01-10 19:22:23,403 | INFO     | exitcode: 0
[2026-01-10 14:22:55] 2026-01-10 19:22:23,403 | INFO     | exitmsg: OK
[2026-01-10 14:22:55] 2026-01-10 19:22:23,403 | INFO     | cpuconsumptiontime: 22584 s
[2026-01-10 14:22:55] 2026-01-10 19:22:23,403 | INFO     | nevents: 400
[2026-01-10 14:22:55] 2026-01-10 19:22:23,403 | INFO     | neventsw: 0
[2026-01-10 14:22:55] 2026-01-10 19:22:23,403 | INFO     | pid: 3623214
[2026-01-10 14:22:55] 2026-01-10 19:22:23,403 | INFO     | pgrp: 3623214
[2026-01-10 14:22:55] 2026-01-10 19:22:23,403 | INFO     | corecount: 4
[2026-01-10 14:22:55] 2026-01-10 19:22:23,403 | INFO     | event service: False
[2026-01-10 14:22:55] 2026-01-10 19:22:23,403 | INFO     | sizes: {0: 2284032, 3: 2284294, 11: 2284322, 5811: 2311223, 5812: 2320291, 5814: 2320429}
[2026-01-10 14:22:55] 2026-01-10 19:22:23,404 | INFO     | --------------------------------------------------
[2026-01-10 14:22:55] 2026-01-10 19:22:23,404 | INFO     | 
[2026-01-10 14:22:55] 2026-01-10 19:22:23,404 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2026-01-10 14:22:55] 2026-01-10 19:22:23,415 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 14:22:55] 2026-01-10 19:22:23,415 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 14:22:55] 2026-01-10 19:22:23,415 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 14:22:55] 2026-01-10 19:22:23,415 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 14:22:55] 2026-01-10 19:22:23,415 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 14:22:55] 2026-01-10 19:22:23,415 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 14:22:55] 2026-01-10 19:22:23,415 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 14:22:55] 2026-01-10 19:22:23,415 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 14:22:55] 2026-01-10 19:22:23,415 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 14:22:55] 2026-01-10 19:22:23,415 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 14:22:55] 2026-01-10 19:22:23,415 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 14:22:55] 2026-01-10 19:22:23,415 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 14:22:55] 2026-01-10 19:22:23,415 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 14:22:55] 2026-01-10 19:22:23,415 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 14:22:55] 2026-01-10 19:22:23,415 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 14:22:55] 2026-01-10 19:22:23,415 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 14:22:55] 2026-01-10 19:22:23,415 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 14:22:55] 2026-01-10 19:22:23,415 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 14:22:55] 2026-01-10 19:22:23,415 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 14:22:55] 2026-01-10 19:22:23,415 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 14:22:55] 2026-01-10 19:22:23,415 | INFO     | job 6965390988 has completed (purged errors)
[2026-01-10 14:22:55] 2026-01-10 19:22:23,415 | INFO     | overall cleanup function is called
[2026-01-10 14:22:55] 2026-01-10 19:22:24,422 | INFO     | --- collectZombieJob: --- 10, [3623214]
[2026-01-10 14:22:55] 2026-01-10 19:22:24,422 | INFO     | zombie collector waiting for pid 3623214
[2026-01-10 14:22:55] 2026-01-10 19:22:24,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 14:22:55] 2026-01-10 19:22:24,422 | INFO     | collected zombie processes
[2026-01-10 14:22:55] 2026-01-10 19:22:24,422 | INFO     | will attempt to kill all subprocesses of pid=3623214
[2026-01-10 14:22:55] 2026-01-10 19:22:24,471 | INFO     | process IDs to be killed: [3623214] (in reverse order)
[2026-01-10 14:22:55] 2026-01-10 19:22:24,497 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 14:22:55] 2026-01-10 19:22:24,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 14:22:55] 2026-01-10 19:22:24,498 | INFO     | did not find any defunct processes belonging to 3623214
[2026-01-10 14:22:55] 2026-01-10 19:22:24,500 | INFO     | did not find any defunct processes belonging to 3623214
[2026-01-10 14:22:55] 2026-01-10 19:22:24,500 | INFO     | ready for new job
[2026-01-10 14:22:55] 2026-01-10 19:22:24,500 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 14:22:55] 2026-01-10 19:22:24,501 | INFO     | ***************************************
[2026-01-10 14:22:55] 2026-01-10 19:22:24,501 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 14:22:55] 2026-01-10 19:22:24,501 | INFO     | ***************************************
[2026-01-10 14:22:55] 2026-01-10 19:22:24,501 | INFO     | 
[2026-01-10 14:22:55] 2026-01-10 19:22:24,501 | INFO     | architecture information:
[2026-01-10 14:22:55] 2026-01-10 19:22:24,501 | INFO     | executing command: cat /etc/os-release
[2026-01-10 14:22:55] 2026-01-10 19:22:24,508 | INFO     | cat /etc/os-release:
[2026-01-10 14:22:55] NAME="CentOS Linux"
[2026-01-10 14:22:55] VERSION="7 (Core)"
[2026-01-10 14:22:55] ID="centos"
[2026-01-10 14:22:55] ID_LIKE="rhel fedora"
[2026-01-10 14:22:55] VERSION_ID="7"
[2026-01-10 14:22:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 14:22:55] ANSI_COLOR="0;31"
[2026-01-10 14:22:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 14:22:55] HOME_URL="https://www.centos.org/"
[2026-01-10 14:22:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 14:22:55] 
[2026-01-10 14:22:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 14:22:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 14:22:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 14:22:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 14:22:55] 
[2026-01-10 14:22:55] 2026-01-10 19:22:24,508 | INFO     | ***************************************
[2026-01-10 14:22:55] 2026-01-10 19:22:25,010 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2026-01-10 14:22:55] 2026-01-10 19:22:25,017 | INFO     | sufficient remaining disk space (891040038912 B)
[2026-01-10 14:22:55] 2026-01-10 19:22:25,017 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 14:22:55] 2026-01-10 19:22:25,017 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 14:22:55] 2026-01-10 19:22:25,017 | INFO     | update_server=False
[2026-01-10 14:22:55] 2026-01-10 19:22:25,017 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 14:22:55] 2026-01-10 19:22:25,017 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 14:22:55] 2026-01-10 19:22:25,017 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 14:22:55] 2026-01-10 19:22:25,211 | INFO     | [monitor] cgroup control has ended
[2026-01-10 14:22:55] 2026-01-10 19:22:25,786 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 14:22:55] 2026-01-10 19:22:25,786 | INFO     | aborting loop
[2026-01-10 14:22:55] 2026-01-10 19:22:25,964 | INFO     | all data control threads have been joined
[2026-01-10 14:22:55] 2026-01-10 19:22:26,022 | INFO     | [job] queue monitor thread has finished
[2026-01-10 14:22:55] 2026-01-10 19:22:26,022 | INFO     | [job] retrieve thread has finished
[2026-01-10 14:22:55] 2026-01-10 19:22:26,034 | INFO     | all payload control threads have been joined
[2026-01-10 14:22:55] 2026-01-10 19:22:26,074 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 14:22:55] 2026-01-10 19:22:26,288 | INFO     | [payload] validate_post thread has finished
[2026-01-10 14:22:55] 2026-01-10 19:22:26,306 | INFO     | all job control threads have been joined
[2026-01-10 14:22:55] 2026-01-10 19:22:26,791 | INFO     | [job] job monitor thread has finished
[2026-01-10 14:22:55] 2026-01-10 19:22:26,969 | INFO     | [data] control thread has finished
[2026-01-10 14:22:55] 2026-01-10 19:22:27,022 | INFO     | [data] copytool_out thread has finished
[2026-01-10 14:22:55] 2026-01-10 19:22:27,039 | INFO     | [payload] control thread has finished
[2026-01-10 14:22:55] 2026-01-10 19:22:27,168 | INFO     | [data] copytool_in thread has finished
[2026-01-10 14:22:55] 2026-01-10 19:22:27,216 | INFO     | [job] validate thread has finished
[2026-01-10 14:22:55] 2026-01-10 19:22:27,270 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 14:22:55] 2026-01-10 19:22:27,312 | INFO     | [job] control thread has finished
[2026-01-10 14:22:55] 2026-01-10 19:22:27,364 | INFO     | [payload] failed_post thread has finished
[2026-01-10 14:22:55] 2026-01-10 19:22:27,396 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 14:22:55] 2026-01-10 19:22:27,503 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 14:22:55] 2026-01-10 19:22:27,503 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 14:22:55] 2026-01-10 19:22:31,508 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 14:22:55] 2026-01-10 19:22:32,064 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131060104214336)>', '<ExcThread(monitor, started 131059610003200)>']
[2026-01-10 14:22:55] 2026-01-10 19:22:37,091 | INFO     | all workflow threads have been joined
[2026-01-10 14:22:55] 2026-01-10 19:22:37,091 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 14:22:55] 2026-01-10 19:22:37,091 | INFO     | traces error code: 0
[2026-01-10 14:22:55] 2026-01-10 19:22:37,092 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 14:22:55] 2026-01-10 19:22:55,390 | INFO     | PID=3616552 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 14:22:55] 2026-01-10 19:22:55,390 | INFO     | .. there are 4 such processes running
[2026-01-10 14:22:55] 2026-01-10 19:22:55,390 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 14:22:55] 2026-01-10 19:22:55,390 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 14:22:55] 2026-01-10 19:22:55,390 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 14:22:55] 2026-01-10 19:22:55,390 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 14:22:55] 2026-01-10 19:22:55,390 | INFO     | [monitor] control thread has ended
[2026-01-10 14:22:55] 2026-01-10 19:22:55,431 [wrapper] ==== pilot stdout END ====
[2026-01-10 14:22:55] 2026-01-10 19:22:55,432 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 14:22:55] 2026-01-10 19:22:55,433 [wrapper] pilotpid: 3616552
[2026-01-10 14:22:55] 2026-01-10 19:22:55,433 [wrapper] Pilot exit status: 0
[2026-01-10 14:22:55] 2026-01-10 19:22:55,437 [wrapper] pandaids: 6965390988
[2026-01-10 14:22:55] 2026-01-10 19:22:55,455 [wrapper] cleanup supervisor_pilot 3730117 3616553
[2026-01-10 14:22:55] 2026-01-10 19:22:55,456 [wrapper] Test setup, not cleaning
[2026-01-10 14:22:55] 2026-01-10 19:22:55,457 [wrapper] apfmon messages muted
[2026-01-10 14:22:55] 2026-01-10 19:22:55,458 [wrapper] ==== wrapper stdout END ====
[2026-01-10 14:22:55] 2026-01-10 19:22:55,459 [wrapper] ==== wrapper stderr END ====
[2026-01-10 14:22:55]  *** Error codes and diagnostics ***
[2026-01-10 14:22:55]     "exeErrorCode": 0,
[2026-01-10 14:22:55]     "exeErrorDiag": "",
[2026-01-10 14:22:55]     "pilotErrorCode": 0,
[2026-01-10 14:22:55]     "pilotErrorDiag": "",
[2026-01-10 14:22:55]  *** Listing of results directory ***
[2026-01-10 14:22:55] total 1157500
[2026-01-10 14:22:55] -rw-r--r-- 1 boinc boinc      5112 Jan 10 08:29 queuedata.json
[2026-01-10 14:22:55] -rw-r--r-- 1 boinc boinc    579449 Jan 10 08:29 pilot3.tar.gz
[2026-01-10 14:22:55] -rwx------ 1 boinc boinc     36322 Jan 10 08:30 runpilot2-wrapper.sh
[2026-01-10 14:22:55] -rw-r--r-- 1 boinc boinc       100 Jan 10 12:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 14:22:55] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 12:45 run_atlas
[2026-01-10 14:22:55] -rw-r--r-- 1 boinc boinc       105 Jan 10 12:45 job.xml
[2026-01-10 14:22:55] -rw-r--r-- 2 boinc boinc     15847 Jan 10 12:45 start_atlas.sh
[2026-01-10 14:22:55] drwxrwx--x 2 boinc boinc      4096 Jan 10 12:45 shared
[2026-01-10 14:22:55] -rw-r--r-- 2 boinc boinc    592416 Jan 10 12:45 input.tar.gz
[2026-01-10 14:22:55] -rw-r--r-- 1 boinc boinc      9845 Jan 10 12:45 init_data.xml
[2026-01-10 14:22:55] -rw-r--r-- 2 boinc boinc 921737977 Jan 10 12:45 EVNT.48039248._000048.pool.root.1
[2026-01-10 14:22:55] -rw-r--r-- 1 boinc boinc         0 Jan 10 12:45 boinc_lockfile
[2026-01-10 14:22:55] -rw-r--r-- 1 boinc boinc      2591 Jan 10 12:45 pandaJob.out
[2026-01-10 14:22:55] -rw------- 1 boinc boinc    989548 Jan 10 12:45 agis_schedconf.cvmfs.json
[2026-01-10 14:22:55] -rw------- 1 boinc boinc   1516240 Jan 10 12:45 agis_ddmendpoints.agis.ALL.json
[2026-01-10 14:22:55] drwx------ 5 boinc boinc      4096 Jan 10 12:45 pilot3
[2026-01-10 14:22:55] -rw------- 1 boinc boinc        95 Jan 10 14:21 pilot_heartbeat.json
[2026-01-10 14:22:55] -rw------- 1 boinc boinc 257214676 Jan 10 14:22 HITS.48039250._006792.pool.root.1
[2026-01-10 14:22:55] -rw-r--r-- 1 boinc boinc       530 Jan 10 14:22 boinc_task_state.xml
[2026-01-10 14:22:55] -rw------- 1 boinc boinc      1022 Jan 10 14:22 memory_monitor_summary.json
[2026-01-10 14:22:55] -rw------- 1 boinc boinc    337648 Jan 10 14:22 log.48039250._006792.job.log.tgz.1
[2026-01-10 14:22:55] -rw------- 1 boinc boinc      7757 Jan 10 14:22 heartbeat.json
[2026-01-10 14:22:55] -rw-r--r-- 1 boinc boinc      8192 Jan 10 14:22 boinc_mmap_file
[2026-01-10 14:22:55] -rw-r--r-- 1 boinc boinc        27 Jan 10 14:22 wrapper_checkpoint.txt
[2026-01-10 14:22:55] -rw------- 1 boinc boinc       822 Jan 10 14:22 pilotlog.txt
[2026-01-10 14:22:55] -rw------- 1 boinc boinc    868234 Jan 10 14:22 log.48039250._006792.job.log.1
[2026-01-10 14:22:55] -rw------- 1 boinc boinc       357 Jan 10 14:22 output.list
[2026-01-10 14:22:55] -rw-r--r-- 1 boinc boinc       620 Jan 10 14:22 runtime_log
[2026-01-10 14:22:55] -rw------- 1 boinc boinc   1228800 Jan 10 14:22 result.tar.gz
[2026-01-10 14:22:55] -rw-r--r-- 1 boinc boinc      8897 Jan 10 14:22 runtime_log.err
[2026-01-10 14:22:55] -rw------- 1 boinc boinc       644 Jan 10 14:22 9UtNDmKEoy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVtmKDmX375Kn.diag
[2026-01-10 14:22:55] -rw-r--r-- 1 boinc boinc     21398 Jan 10 14:22 stderr.txt
[2026-01-10 14:22:55] HITS file was successfully produced:
[2026-01-10 14:22:55] -rw------- 1 boinc boinc 257214676 Jan 10 14:22 shared/HITS.pool.root.1
[2026-01-10 14:22:55]  *** Contents of shared directory: ***
[2026-01-10 14:22:55] total 1153128
[2026-01-10 14:22:55] -rw-r--r-- 2 boinc boinc     15847 Jan 10 12:45 start_atlas.sh
[2026-01-10 14:22:55] -rw-r--r-- 2 boinc boinc    592416 Jan 10 12:45 input.tar.gz
[2026-01-10 14:22:55] -rw-r--r-- 2 boinc boinc 921737977 Jan 10 12:45 ATLAS.root_0
[2026-01-10 14:22:55] -rw------- 1 boinc boinc 257214676 Jan 10 14:22 HITS.pool.root.1
[2026-01-10 14:22:55] -rw------- 1 boinc boinc   1228800 Jan 10 14:22 result.tar.gz
14:22:56 (3612697): run_atlas exited; CPU time 22619.522189
14:22:56 (3612697): called boinc_finish(0)

</stderr_txt>
]]>

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