Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:32:54 (3537186): wrapper (7.7.26015): starting
08:32:54 (3537186): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 08:32:54] Arguments: --nthreads 9
[2026-01-10 08:32:54] Threads: 9
[2026-01-10 08:32:54] Checking for CVMFS
[2026-01-10 08:32:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:32:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:32:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:32:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:32:55] 2.13.3.0 11836 93435 380492 154981 3 264 27554150 32935936 12390 16776704 0 350380698 99.488 453226463 34383 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:32:55] CVMFS is ok
[2026-01-10 08:32:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:32:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:32:55] Further information can be found at the LHC@home message board.
[2026-01-10 08:32:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:32:55] Checking for apptainer binary...
[2026-01-10 08:32:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:32:55] Running /usr/bin/apptainer --version
[2026-01-10 08:32:55] apptainer version 1.4.5-2.el9
[2026-01-10 08:32:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:32:55] c6-2-11-1.aglt2.org
[2026-01-10 08:32:55] apptainer works
[2026-01-10 08:32:55] Set ATHENA_PROC_NUMBER=9
[2026-01-10 08:32:55] Set ATHENA_CORE_NUMBER=9
[2026-01-10 08:32:55] Starting ATLAS job with PandaID=6965390344
[2026-01-10 08:32:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 16:23:07]  *** The last 200 lines of the pilot log: ***
[2026-01-10 16:23:07] 2026-01-10 21:22:04,519 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 16:23:07] 2026-01-10 21:22:04,532 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2747.034958333332
[2026-01-10 16:23:07] 2026-01-10 21:22:04,550 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965390344/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 16:23:07] 2026-01-10 21:22:04,551 | INFO     | extracted standard info from prmon json
[2026-01-10 16:23:07] 2026-01-10 21:22:04,551 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 16:23:07] 2026-01-10 21:22:04,551 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 16:23:07] 2026-01-10 21:22:04,551 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 16:23:07] 2026-01-10 21:22:04,551 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 16:23:07] 2026-01-10 21:22:04,560 | INFO     | fitting pss+swap vs Time
[2026-01-10 16:23:07] 2026-01-10 21:22:04,560 | INFO     | sum of square deviations: 30379163277.366623
[2026-01-10 16:23:07] 2026-01-10 21:22:04,565 | INFO     | sum of deviations: 35624820558.09112
[2026-01-10 16:23:07] 2026-01-10 21:22:04,565 | INFO     | mean x: 1768066061.3535793
[2026-01-10 16:23:07] 2026-01-10 21:22:04,566 | INFO     | mean y: 2620958.4902386116
[2026-01-10 16:23:07] 2026-01-10 21:22:04,566 | INFO     | intersect: -2070742142.2472787
[2026-01-10 16:23:07] 2026-01-10 21:22:04,566 | INFO     | chi2: 2.2273038340061726
[2026-01-10 16:23:07] 2026-01-10 21:22:04,567 | INFO     | sum of square deviations: 29401408611.734566
[2026-01-10 16:23:07] 2026-01-10 21:22:04,572 | INFO     | sum of deviations: 64929603779.83553
[2026-01-10 16:23:07] 2026-01-10 21:22:04,572 | INFO     | mean x: 1768065908.8574562
[2026-01-10 16:23:07] 2026-01-10 21:22:04,572 | INFO     | mean y: 2625487.1513157897
[2026-01-10 16:23:07] 2026-01-10 21:22:04,572 | INFO     | intersect: -3901943182.831762
[2026-01-10 16:23:07] 2026-01-10 21:22:04,573 | INFO     | chi2: 1.5382953054855975
[2026-01-10 16:23:07] 2026-01-10 21:22:04,573 | INFO     | current chi2=1.5382953054855975 (change=30.93464474854694 %)
[2026-01-10 16:23:07] 2026-01-10 21:22:04,574 | INFO     | sum of square deviations: 28444863646.088654
[2026-01-10 16:23:07] 2026-01-10 21:22:04,578 | INFO     | sum of deviations: 63650695038.86034
[2026-01-10 16:23:07] 2026-01-10 21:22:04,578 | INFO     | mean x: 1768065756.361419
[2026-01-10 16:23:07] 2026-01-10 21:22:04,579 | INFO     | mean y: 2625283.4057649667
[2026-01-10 16:23:07] 2026-01-10 21:22:04,579 | INFO     | intersect: -3953752067.0719676
[2026-01-10 16:23:07] 2026-01-10 21:22:04,579 | INFO     | chi2: 1.538486923436182
[2026-01-10 16:23:07] 2026-01-10 21:22:04,579 | INFO     | current chi2=1.538486923436182 (change=-0.012456512732062476 %)
[2026-01-10 16:23:07] 2026-01-10 21:22:04,579 | INFO     | right removable region: 450
[2026-01-10 16:23:07] 2026-01-10 21:22:04,580 | INFO     | sum of square deviations: 29401309181.734566
[2026-01-10 16:23:07] 2026-01-10 21:22:04,585 | INFO     | sum of deviations: -44798212903.61621
[2026-01-10 16:23:07] 2026-01-10 21:22:04,585 | INFO     | mean x: 1768066213.8574562
[2026-01-10 16:23:07] 2026-01-10 21:22:04,585 | INFO     | mean y: 2633449.3135964912
[2026-01-10 16:23:07] 2026-01-10 21:22:04,585 | INFO     | intersect: 2696602149.3633027
[2026-01-10 16:23:07] 2026-01-10 21:22:04,586 | INFO     | chi2: 0.7602790543215366
[2026-01-10 16:23:07] 2026-01-10 21:22:04,586 | INFO     | current chi2=0.7602790543215366 (change=65.86549878316109 %)
[2026-01-10 16:23:07] 2026-01-10 21:22:04,587 | INFO     | sum of square deviations: 28444692479.80926
[2026-01-10 16:23:07] 2026-01-10 21:22:04,592 | INFO     | sum of deviations: -49072514218.957855
[2026-01-10 16:23:07] 2026-01-10 21:22:04,592 | INFO     | mean x: 1768066366.3592017
[2026-01-10 16:23:07] 2026-01-10 21:22:04,592 | INFO     | mean y: 2634123.33924612
[2026-01-10 16:23:07] 2026-01-10 21:22:04,592 | INFO     | intersect: 3052885482.7030325
[2026-01-10 16:23:07] 2026-01-10 21:22:04,593 | INFO     | chi2: 0.7423705858364039
[2026-01-10 16:23:07] 2026-01-10 21:22:04,593 | INFO     | current chi2=0.7423705858364039 (change=2.355512542840472 %)
[2026-01-10 16:23:07] 2026-01-10 21:22:04,593 | INFO     | left removable region: 20
[2026-01-10 16:23:07] 2026-01-10 21:22:04,593 | INFO     | sum of square deviations: 24653419957.444206
[2026-01-10 16:23:07] 2026-01-10 21:22:04,598 | INFO     | sum of deviations: -11823216678.209303
[2026-01-10 16:23:07] 2026-01-10 21:22:04,598 | INFO     | mean x: 1768066335.867442
[2026-01-10 16:23:07] 2026-01-10 21:22:04,598 | INFO     | mean y: 2637436.6279069767
[2026-01-10 16:23:07] 2026-01-10 21:22:04,598 | INFO     | intersect: 850561636.4546424
[2026-01-10 16:23:07] 2026-01-10 21:22:04,599 | INFO     | chi2: 0.04067142467954215
[2026-01-10 16:23:07] 2026-01-10 21:22:04,599 | INFO     | current memory leak: -0.48 B/s (using 430 data points, chi2=0.04)
[2026-01-10 16:23:07] 2026-01-10 21:22:04,600 | INFO     | could have reported an average CPU frequency of 2676 MHz (19 samples)
[2026-01-10 16:23:07] 2026-01-10 21:22:04,600 | INFO     | ..............................
[2026-01-10 16:23:07] 2026-01-10 21:22:04,600 | INFO     | . Timing measurements:
[2026-01-10 16:23:07] 2026-01-10 21:22:04,600 | INFO     | . get job = 0 s
[2026-01-10 16:23:07] 2026-01-10 21:22:04,600 | INFO     | . initial setup = 2 s
[2026-01-10 16:23:07] 2026-01-10 21:22:04,600 | INFO     | . payload setup = 9 s
[2026-01-10 16:23:07] 2026-01-10 21:22:04,600 | INFO     | . stage-in = 0 s
[2026-01-10 16:23:07] 2026-01-10 21:22:04,600 | INFO     | . payload execution = 28089 s
[2026-01-10 16:23:07] 2026-01-10 21:22:04,600 | INFO     | . stage-out = 2 s
[2026-01-10 16:23:07] 2026-01-10 21:22:04,600 | INFO     | . log creation = 0 s
[2026-01-10 16:23:07] 2026-01-10 21:22:04,600 | INFO     | ..............................
[2026-01-10 16:23:07] 2026-01-10 21:22:04,770 | INFO     | 
[2026-01-10 16:23:07] 2026-01-10 21:22:04,770 | INFO     | job summary report
[2026-01-10 16:23:07] 2026-01-10 21:22:04,770 | INFO     | --------------------------------------------------
[2026-01-10 16:23:07] 2026-01-10 21:22:04,770 | INFO     | PanDA job id: 6965390344
[2026-01-10 16:23:07] 2026-01-10 21:22:04,771 | INFO     | task id: 48039250
[2026-01-10 16:23:07] 2026-01-10 21:22:04,771 | INFO     | errors: (none)
[2026-01-10 16:23:07] 2026-01-10 21:22:04,771 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 16:23:07] 2026-01-10 21:22:04,771 | INFO     | pilot state: finished 
[2026-01-10 16:23:07] 2026-01-10 21:22:04,771 | INFO     | transexitcode: 0
[2026-01-10 16:23:07] 2026-01-10 21:22:04,771 | INFO     | exeerrorcode: 0
[2026-01-10 16:23:07] 2026-01-10 21:22:04,771 | INFO     | exeerrordiag: 
[2026-01-10 16:23:07] 2026-01-10 21:22:04,771 | INFO     | exitcode: 0
[2026-01-10 16:23:07] 2026-01-10 21:22:04,771 | INFO     | exitmsg: OK
[2026-01-10 16:23:07] 2026-01-10 21:22:04,771 | INFO     | cpuconsumptiontime: 59839 s
[2026-01-10 16:23:07] 2026-01-10 21:22:04,771 | INFO     | nevents: 400
[2026-01-10 16:23:07] 2026-01-10 21:22:04,771 | INFO     | neventsw: 0
[2026-01-10 16:23:07] 2026-01-10 21:22:04,772 | INFO     | pid: 3564248
[2026-01-10 16:23:07] 2026-01-10 21:22:04,772 | INFO     | pgrp: 3564248
[2026-01-10 16:23:07] 2026-01-10 21:22:04,772 | INFO     | corecount: 9
[2026-01-10 16:23:07] 2026-01-10 21:22:04,772 | INFO     | event service: False
[2026-01-10 16:23:07] 2026-01-10 21:22:04,772 | INFO     | sizes: {0: 2283245, 1: 2284101, 2: 2284101, 8: 2284391, 12: 2284419, 28102: 2321170, 28103: 2321297, 28105: 2330351, 28107: 2330407, 28114: 2330601}
[2026-01-10 16:23:07] 2026-01-10 21:22:04,772 | INFO     | --------------------------------------------------
[2026-01-10 16:23:07] 2026-01-10 21:22:04,772 | INFO     | 
[2026-01-10 16:23:07] 2026-01-10 21:22:04,772 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 16:23:07] 2026-01-10 21:22:04,798 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 16:23:07] 2026-01-10 21:22:04,799 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 16:23:07] 2026-01-10 21:22:04,799 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 16:23:07] 2026-01-10 21:22:04,799 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 16:23:07] 2026-01-10 21:22:04,799 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 16:23:07] 2026-01-10 21:22:04,799 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 16:23:07] 2026-01-10 21:22:04,799 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 16:23:07] 2026-01-10 21:22:04,800 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 16:23:07] 2026-01-10 21:22:04,800 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 16:23:07] 2026-01-10 21:22:04,800 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 16:23:07] 2026-01-10 21:22:04,800 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 16:23:07] 2026-01-10 21:22:04,800 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 16:23:07] 2026-01-10 21:22:04,800 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 16:23:07] 2026-01-10 21:22:04,800 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 16:23:07] 2026-01-10 21:22:04,800 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 16:23:07] 2026-01-10 21:22:04,801 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 16:23:07] 2026-01-10 21:22:04,801 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 16:23:07] 2026-01-10 21:22:04,801 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 16:23:07] 2026-01-10 21:22:04,801 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 16:23:07] 2026-01-10 21:22:04,801 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 16:23:07] 2026-01-10 21:22:04,801 | INFO     | job 6965390344 has completed (purged errors)
[2026-01-10 16:23:07] 2026-01-10 21:22:04,801 | INFO     | overall cleanup function is called
[2026-01-10 16:23:07] 2026-01-10 21:22:05,234 | INFO     | PID=3545612 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-10 16:23:07] 2026-01-10 21:22:05,234 | INFO     | .. there are 14 such processes running
[2026-01-10 16:23:07] 2026-01-10 21:22:05,811 | INFO     | --- collectZombieJob: --- 10, [3564248]
[2026-01-10 16:23:07] 2026-01-10 21:22:05,811 | INFO     | zombie collector waiting for pid 3564248
[2026-01-10 16:23:07] 2026-01-10 21:22:05,811 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 16:23:07] 2026-01-10 21:22:05,811 | INFO     | collected zombie processes
[2026-01-10 16:23:07] 2026-01-10 21:22:05,811 | INFO     | will attempt to kill all subprocesses of pid=3564248
[2026-01-10 16:23:07] 2026-01-10 21:22:06,174 | INFO     | process IDs to be killed: [3564248] (in reverse order)
[2026-01-10 16:23:07] 2026-01-10 21:22:06,293 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 16:23:07] 2026-01-10 21:22:06,293 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 16:23:07] 2026-01-10 21:22:06,309 | INFO     | did not find any defunct processes belonging to 3564248
[2026-01-10 16:23:07] 2026-01-10 21:22:06,326 | INFO     | did not find any defunct processes belonging to 3564248
[2026-01-10 16:23:07] 2026-01-10 21:22:06,326 | INFO     | ready for new job
[2026-01-10 16:23:07] 2026-01-10 21:22:06,326 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 16:23:07] 2026-01-10 21:22:06,329 | INFO     | ***************************************
[2026-01-10 16:23:07] 2026-01-10 21:22:06,329 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 16:23:07] 2026-01-10 21:22:06,329 | INFO     | ***************************************
[2026-01-10 16:23:07] 2026-01-10 21:22:06,329 | INFO     | 
[2026-01-10 16:23:07] 2026-01-10 21:22:06,335 | INFO     | architecture information:
[2026-01-10 16:23:07] 2026-01-10 21:22:06,335 | INFO     | executing command: cat /etc/os-release
[2026-01-10 16:23:07] 2026-01-10 21:22:06,351 | INFO     | cat /etc/os-release:
[2026-01-10 16:23:07] NAME="CentOS Linux"
[2026-01-10 16:23:07] VERSION="7 (Core)"
[2026-01-10 16:23:07] ID="centos"
[2026-01-10 16:23:07] ID_LIKE="rhel fedora"
[2026-01-10 16:23:07] VERSION_ID="7"
[2026-01-10 16:23:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 16:23:07] ANSI_COLOR="0;31"
[2026-01-10 16:23:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 16:23:07] HOME_URL="https://www.centos.org/"
[2026-01-10 16:23:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 16:23:07] 
[2026-01-10 16:23:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 16:23:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 16:23:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 16:23:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 16:23:07] 
[2026-01-10 16:23:07] 2026-01-10 21:22:06,351 | INFO     | ***************************************
[2026-01-10 16:23:07] 2026-01-10 21:22:06,853 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 16:23:07] 2026-01-10 21:22:06,872 | INFO     | sufficient remaining disk space (92935290880 B)
[2026-01-10 16:23:07] 2026-01-10 21:22:06,872 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 16:23:07] 2026-01-10 21:22:06,872 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 16:23:07] 2026-01-10 21:22:06,872 | INFO     | update_server=False
[2026-01-10 16:23:07] 2026-01-10 21:22:06,872 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 16:23:07] 2026-01-10 21:22:06,873 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 16:23:07] 2026-01-10 21:22:07,160 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 16:23:07] 2026-01-10 21:22:07,160 | INFO     | aborting loop
[2026-01-10 16:23:07] 2026-01-10 21:22:07,493 | INFO     | all job control threads have been joined
[2026-01-10 16:23:07] 2026-01-10 21:22:07,794 | INFO     | all data control threads have been joined
[2026-01-10 16:23:07] 2026-01-10 21:22:07,877 | INFO     | [job] retrieve thread has finished
[2026-01-10 16:23:07] 2026-01-10 21:22:07,972 | INFO     | all payload control threads have been joined
[2026-01-10 16:23:07] 2026-01-10 21:22:08,041 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 16:23:07] 2026-01-10 21:22:08,159 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 16:23:07] 2026-01-10 21:22:08,166 | INFO     | [job] job monitor thread has finished
[2026-01-10 16:23:07] 2026-01-10 21:22:08,261 | INFO     | [payload] failed_post thread has finished
[2026-01-10 16:23:07] 2026-01-10 21:22:08,419 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 16:23:07] 2026-01-10 21:22:08,499 | INFO     | [job] control thread has finished
[2026-01-10 16:23:07] 2026-01-10 21:22:08,517 | INFO     | [job] validate thread has finished
[2026-01-10 16:23:07] 2026-01-10 21:22:08,597 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 16:23:07] 2026-01-10 21:22:08,799 | INFO     | [data] control thread has finished
[2026-01-10 16:23:07] 2026-01-10 21:22:08,833 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 16:23:07] 2026-01-10 21:22:08,878 | INFO     | [data] copytool_out thread has finished
[2026-01-10 16:23:07] 2026-01-10 21:22:08,977 | INFO     | [payload] control thread has finished
[2026-01-10 16:23:07] 2026-01-10 21:22:09,039 | INFO     | [payload] validate_post thread has finished
[2026-01-10 16:23:07] 2026-01-10 21:22:09,379 | INFO     | [data] copytool_in thread has finished
[2026-01-10 16:23:07] 2026-01-10 21:22:09,731 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 16:23:07] 2026-01-10 21:22:10,739 | INFO     | [job] queue monitor thread has finished
[2026-01-10 16:23:07] 2026-01-10 21:22:12,841 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 16:23:07] 2026-01-10 21:22:37,815 | INFO     | PID=3545612 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 16:23:07] 2026-01-10 21:22:37,815 | INFO     | .. there are 14 such processes running
[2026-01-10 16:23:07] 2026-01-10 21:22:37,816 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 16:23:07] 2026-01-10 21:22:37,816 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 16:23:07] 2026-01-10 21:22:37,816 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 16:23:07] 2026-01-10 21:23:01,345 | INFO     | [monitor] cgroup control has ended
[2026-01-10 16:23:07] 2026-01-10 21:23:02,353 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139907737917248)>', '<ExcThread(monitor, started 139907393636096)>']
[2026-01-10 16:23:07] 2026-01-10 21:23:02,951 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 16:23:07] 2026-01-10 21:23:02,951 | INFO     | [monitor] control thread has ended
[2026-01-10 16:23:07] 2026-01-10 21:23:07,379 | INFO     | all workflow threads have been joined
[2026-01-10 16:23:07] 2026-01-10 21:23:07,379 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 16:23:07] 2026-01-10 21:23:07,380 | INFO     | traces error code: 0
[2026-01-10 16:23:07] 2026-01-10 21:23:07,380 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 16:23:07] 2026-01-10 21:23:07,601 [wrapper] ==== pilot stdout END ====
[2026-01-10 16:23:07] 2026-01-10 21:23:07,603 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 16:23:07] 2026-01-10 21:23:07,606 [wrapper] pilotpid: 3545612
[2026-01-10 16:23:07] 2026-01-10 21:23:07,609 [wrapper] Pilot exit status: 0
[2026-01-10 16:23:07] 2026-01-10 21:23:07,619 [wrapper] pandaids: 6965390344
[2026-01-10 16:23:07] 2026-01-10 21:23:07,700 [wrapper] cleanup supervisor_pilot 1337217 3545613
[2026-01-10 16:23:07] 2026-01-10 21:23:07,703 [wrapper] Test setup, not cleaning
[2026-01-10 16:23:07] 2026-01-10 21:23:07,706 [wrapper] apfmon messages muted
[2026-01-10 16:23:07] 2026-01-10 21:23:07,709 [wrapper] ==== wrapper stdout END ====
[2026-01-10 16:23:07] 2026-01-10 21:23:07,711 [wrapper] ==== wrapper stderr END ====
[2026-01-10 16:23:07]  *** Error codes and diagnostics ***
[2026-01-10 16:23:07]     "exeErrorCode": 0,
[2026-01-10 16:23:07]     "exeErrorDiag": "",
[2026-01-10 16:23:07]     "pilotErrorCode": 0,
[2026-01-10 16:23:07]     "pilotErrorDiag": "",
[2026-01-10 16:23:07]  *** Listing of results directory ***
[2026-01-10 16:23:07] total 1168968
[2026-01-10 16:23:07] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:29 queuedata.json
[2026-01-10 16:23:07] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:29 pilot3.tar.gz
[2026-01-10 16:23:07] -rwx------. 1 boincer umatlas     36322 Jan 10 08:29 runpilot2-wrapper.sh
[2026-01-10 16:23:07] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 16:23:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:32 run_atlas
[2026-01-10 16:23:07] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:32 job.xml
[2026-01-10 16:23:07] -rw-r--r--. 2 boincer umatlas 928736590 Jan 10 08:32 EVNT.48039248._000046.pool.root.1
[2026-01-10 16:23:07] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:32 start_atlas.sh
[2026-01-10 16:23:07] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:32 shared
[2026-01-10 16:23:07] -rw-r--r--. 2 boincer umatlas    592420 Jan 10 08:32 input.tar.gz
[2026-01-10 16:23:07] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:32 boinc_lockfile
[2026-01-10 16:23:07] -rw-r--r--. 1 boincer umatlas      2590 Jan 10 08:32 pandaJob.out
[2026-01-10 16:23:07] -rw-------. 1 boincer umatlas        57 Jan 10 08:32 setup.sh.local
[2026-01-10 16:23:07] -rw-------. 1 boincer umatlas    989556 Jan 10 08:33 agis_schedconf.cvmfs.json
[2026-01-10 16:23:07] drwx------. 5 boincer umatlas      4096 Jan 10 08:33 pilot3
[2026-01-10 16:23:07] -rw-r--r--. 1 boincer umatlas      6877 Jan 10 16:20 init_data.xml
[2026-01-10 16:23:07] -rw-------. 1 boincer umatlas 256046854 Jan 10 16:21 HITS.48039250._006754.pool.root.1
[2026-01-10 16:23:07] -rw-r--r--. 1 boincer umatlas       532 Jan 10 16:21 boinc_task_state.xml
[2026-01-10 16:23:07] -rw-------. 1 boincer umatlas      1037 Jan 10 16:21 memory_monitor_summary.json
[2026-01-10 16:23:07] -rw-------. 1 boincer umatlas   1516240 Jan 10 16:21 agis_ddmendpoints.agis.ALL.json
[2026-01-10 16:23:07] -rw-------. 1 boincer umatlas    649115 Jan 10 16:21 log.48039250._006754.job.log.tgz.1
[2026-01-10 16:23:07] -rw-------. 1 boincer umatlas      7815 Jan 10 16:22 heartbeat.json
[2026-01-10 16:23:07] -rw-------. 1 boincer umatlas        95 Jan 10 16:22 pilot_heartbeat.json
[2026-01-10 16:23:07] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 16:22 boinc_mmap_file
[2026-01-10 16:23:07] -rw-r--r--. 1 boincer umatlas        28 Jan 10 16:22 wrapper_checkpoint.txt
[2026-01-10 16:23:07] -rw-------. 1 boincer umatlas      4824 Jan 10 16:23 pilotlog.txt
[2026-01-10 16:23:07] -rw-------. 1 boincer umatlas   3510340 Jan 10 16:23 log.48039250._006754.job.log.1
[2026-01-10 16:23:07] -rw-------. 1 boincer umatlas       357 Jan 10 16:23 output.list
[2026-01-10 16:23:07] -rw-r--r--. 1 boincer umatlas       620 Jan 10 16:23 runtime_log
[2026-01-10 16:23:07] -rw-------. 1 boincer umatlas   4177920 Jan 10 16:23 result.tar.gz
[2026-01-10 16:23:07] -rw-r--r--. 1 boincer umatlas      9348 Jan 10 16:23 runtime_log.err
[2026-01-10 16:23:07] -rw-------. 1 boincer umatlas       657 Jan 10 16:23 BFlNDmRDoy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmusmKDmMlemMn.diag
[2026-01-10 16:23:07] -rw-r--r--. 1 boincer umatlas     21301 Jan 10 16:23 stderr.txt
[2026-01-10 16:23:07] HITS file was successfully produced:
[2026-01-10 16:23:07] -rw-------. 1 boincer umatlas 256046854 Jan 10 16:21 shared/HITS.pool.root.1
[2026-01-10 16:23:07]  *** Contents of shared directory: ***
[2026-01-10 16:23:07] total 1161704
[2026-01-10 16:23:07] -rw-r--r--. 2 boincer umatlas 928736590 Jan 10 08:32 ATLAS.root_0
[2026-01-10 16:23:07] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:32 start_atlas.sh
[2026-01-10 16:23:07] -rw-r--r--. 2 boincer umatlas    592420 Jan 10 08:32 input.tar.gz
[2026-01-10 16:23:07] -rw-------. 1 boincer umatlas 256046854 Jan 10 16:21 HITS.pool.root.1
[2026-01-10 16:23:07] -rw-------. 1 boincer umatlas   4177920 Jan 10 16:23 result.tar.gz
16:23:08 (3537186): run_atlas exited; CPU time 61115.506647
16:23:08 (3537186): called boinc_finish(0)

</stderr_txt>
]]>

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