Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:43:43 (2135349): wrapper (7.7.26015): starting
06:43:43 (2135349): wrapper: running run_atlas (--nthreads 12)
[2026-01-11 06:43:43] Arguments: --nthreads 12
[2026-01-11 06:43:43] Threads: 12
[2026-01-11 06:43:43] Checking for CVMFS
[2026-01-11 06:43:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 06:43:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 06:43:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 06:43:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 06:43:43] 2.13.3.0 4294 5060 115852 155006 0 188 39152976 46080001 922 130560 0 10853442 99.996 188630 928 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-11 06:43:43] CVMFS is ok
[2026-01-11 06:43:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 06:43:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 06:43:43] Further information can be found at the LHC@home message board.
[2026-01-11 06:43:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 06:43:43] Checking for apptainer binary...
[2026-01-11 06:43:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 06:43:43] Running /usr/bin/apptainer --version
[2026-01-11 06:43:43] apptainer version 1.4.5-2.el9
[2026-01-11 06:43:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 06:43:43] gpu01.farm.particle.cz
[2026-01-11 06:43:43] apptainer works
[2026-01-11 06:43:44] Set ATHENA_PROC_NUMBER=12
[2026-01-11 06:43:44] Set ATHENA_CORE_NUMBER=12
[2026-01-11 06:43:44] Starting ATLAS job with PandaID=6965390338
[2026-01-11 06:43:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 07:40:18]  *** The last 200 lines of the pilot log: ***
[2026-01-11 07:40:18]  protocol_id=None
[2026-01-11 07:40:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-11 07:40:18]  replicas=None
[2026-01-11 07:40:18]  scope=mc23_13p6TeV
[2026-01-11 07:40:18]  status=None
[2026-01-11 07:40:18]  status_code=0
[2026-01-11 07:40:18]  storage_token=
[2026-01-11 07:40:18]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6965390338/log.48039250._006748.job.log.tgz.1
[2026-01-11 07:40:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/51/log.48039250._006748.job.log.tgz.1
[2026-01-11 07:40:18]  workdir=None
[2026-01-11 07:40:18] ]
[2026-01-11 07:40:18] 2026-01-11 06:39:40,840 | INFO     | transferring file log.48039250._006748.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6965390338/log.48039250._006748.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-11 07:40:18] 2026-01-11 06:39:40,840 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6965390338/log.48039250._006748.job.log.tgz.1 /var/lib/boinc/slots/0/log.48039250._006748.job
[2026-01-11 07:40:18] 2026-01-11 06:39:40,853 | INFO     | adding to output.list: log.48039250._006748.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/51/log.48039250._006748.job.log.tg
[2026-01-11 07:40:18] 2026-01-11 06:39:40,854 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 07:40:18] 2026-01-11 06:39:40,854 | INFO     | summary of transferred files:
[2026-01-11 07:40:18] 2026-01-11 06:39:40,854 | INFO     |  -- lfn=log.48039250._006748.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 07:40:18] 2026-01-11 06:39:40,854 | INFO     | stage-out finished correctly
[2026-01-11 07:40:18] 2026-01-11 06:39:40,905 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 07:40:18] 2026-01-11 06:39:41,473 | INFO     | time since job start (3349s) is within the limit (349056.0s)
[2026-01-11 07:40:18] 2026-01-11 06:39:41,912 | INFO     | monitor loop #257: job 0:6965390338 is in state 'finished'
[2026-01-11 07:40:18] 2026-01-11 06:39:41,912 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 07:40:18] 2026-01-11 06:39:43,044 | INFO     | job 6965390338 has state=finished
[2026-01-11 07:40:18] 2026-01-11 06:39:43,044 | INFO     | preparing for final server update for job 6965390338 in state='finished'
[2026-01-11 07:40:18] 2026-01-11 06:39:43,044 | INFO     | this job has now completed (state=finished)
[2026-01-11 07:40:18] 2026-01-11 06:39:43,044 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 07:40:18] 2026-01-11 06:39:43,044 | INFO     | log transfer has been attempted: DONE
[2026-01-11 07:40:18] 2026-01-11 06:39:43,044 | INFO     | job 6965390338 has finished - writing final server update
[2026-01-11 07:40:18] 2026-01-11 06:39:43,045 | INFO     | total number of processed events: 400 (read)
[2026-01-11 07:40:18] 2026-01-11 06:39:43,045 | INFO     | executing command: lscpu
[2026-01-11 07:40:18] 2026-01-11 06:39:43,068 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 07:40:18] 2026-01-11 06:39:43,478 | INFO     | time since job start (3351s) is within the limit (349056.0s)
[2026-01-11 07:40:18] 2026-01-11 06:39:44,415 | INFO     | monitor loop #258: job 0:6965390338 is in state 'finished'
[2026-01-11 07:40:18] 2026-01-11 06:39:44,415 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 07:40:18] 2026-01-11 06:39:45,484 | INFO     | time since job start (3353s) is within the limit (349056.0s)
[2026-01-11 07:40:18] 2026-01-11 06:39:45,707 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 07:40:18] 2026-01-11 06:39:45,710 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3212.3894999999998
[2026-01-11 07:40:18] 2026-01-11 06:39:45,713 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6965390338/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 07:40:18] 2026-01-11 06:39:45,714 | INFO     | extracted standard info from prmon json
[2026-01-11 07:40:18] 2026-01-11 06:39:45,714 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 07:40:18] 2026-01-11 06:39:45,714 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 07:40:18] 2026-01-11 06:39:45,714 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 07:40:18] 2026-01-11 06:39:45,714 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 07:40:18] 2026-01-11 06:39:45,715 | INFO     | fitting pss+swap vs Time
[2026-01-11 07:40:18] 2026-01-11 06:39:45,715 | INFO     | sum of square deviations: 34277852.0
[2026-01-11 07:40:18] 2026-01-11 06:39:45,715 | INFO     | sum of deviations: -3013744314.5
[2026-01-11 07:40:18] 2026-01-11 06:39:45,715 | INFO     | mean x: 1768111991.5
[2026-01-11 07:40:18] 2026-01-11 06:39:45,715 | INFO     | mean y: 2891663.3958333335
[2026-01-11 07:40:18] 2026-01-11 06:39:45,715 | INFO     | intersect: 155457132547.0544
[2026-01-11 07:40:18] 2026-01-11 06:39:45,716 | INFO     | chi2: 0.018406232437191937
[2026-01-11 07:40:18] 2026-01-11 06:39:45,716 | INFO     | current memory leak: -87.92 B/s (using 48 data points, chi2=0.02)
[2026-01-11 07:40:18] 2026-01-11 06:39:45,716 | INFO     | could have reported an average CPU frequency of 3229 MHz (5 samples)
[2026-01-11 07:40:18] 2026-01-11 06:39:45,716 | INFO     | ..............................
[2026-01-11 07:40:18] 2026-01-11 06:39:45,716 | INFO     | . Timing measurements:
[2026-01-11 07:40:18] 2026-01-11 06:39:45,716 | INFO     | . get job = 0 s
[2026-01-11 07:40:18] 2026-01-11 06:39:45,716 | INFO     | . initial setup = 2 s
[2026-01-11 07:40:18] 2026-01-11 06:39:45,716 | INFO     | . payload setup = 3 s
[2026-01-11 07:40:18] 2026-01-11 06:39:45,716 | INFO     | . stage-in = 0 s
[2026-01-11 07:40:18] 2026-01-11 06:39:45,716 | INFO     | . payload execution = 3327 s
[2026-01-11 07:40:18] 2026-01-11 06:39:45,716 | INFO     | . stage-out = 0 s
[2026-01-11 07:40:18] 2026-01-11 06:39:45,716 | INFO     | . log creation = 0 s
[2026-01-11 07:40:18] 2026-01-11 06:39:45,716 | INFO     | ..............................
[2026-01-11 07:40:18] 2026-01-11 06:39:46,019 | INFO     | 
[2026-01-11 07:40:18] 2026-01-11 06:39:46,020 | INFO     | job summary report
[2026-01-11 07:40:18] 2026-01-11 06:39:46,020 | INFO     | --------------------------------------------------
[2026-01-11 07:40:18] 2026-01-11 06:39:46,020 | INFO     | PanDA job id: 6965390338
[2026-01-11 07:40:18] 2026-01-11 06:39:46,020 | INFO     | task id: 48039250
[2026-01-11 07:40:18] 2026-01-11 06:39:46,020 | INFO     | errors: (none)
[2026-01-11 07:40:18] 2026-01-11 06:39:46,020 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 07:40:18] 2026-01-11 06:39:46,020 | INFO     | pilot state: finished 
[2026-01-11 07:40:18] 2026-01-11 06:39:46,020 | INFO     | transexitcode: 0
[2026-01-11 07:40:18] 2026-01-11 06:39:46,020 | INFO     | exeerrorcode: 0
[2026-01-11 07:40:18] 2026-01-11 06:39:46,020 | INFO     | exeerrordiag: 
[2026-01-11 07:40:18] 2026-01-11 06:39:46,020 | INFO     | exitcode: 0
[2026-01-11 07:40:18] 2026-01-11 06:39:46,020 | INFO     | exitmsg: OK
[2026-01-11 07:40:18] 2026-01-11 06:39:46,020 | INFO     | cpuconsumptiontime: 36680 s
[2026-01-11 07:40:18] 2026-01-11 06:39:46,020 | INFO     | nevents: 400
[2026-01-11 07:40:18] 2026-01-11 06:39:46,021 | INFO     | neventsw: 0
[2026-01-11 07:40:18] 2026-01-11 06:39:46,021 | INFO     | pid: 2145940
[2026-01-11 07:40:18] 2026-01-11 06:39:46,021 | INFO     | pgrp: 2145940
[2026-01-11 07:40:18] 2026-01-11 06:39:46,021 | INFO     | corecount: 12
[2026-01-11 07:40:18] 2026-01-11 06:39:46,021 | INFO     | event service: False
[2026-01-11 07:40:18] 2026-01-11 06:39:46,021 | INFO     | sizes: {0: 2284075, 3: 2284337, 11: 2284365, 3334: 2310045, 3335: 2319099, 3340: 2319269}
[2026-01-11 07:40:18] 2026-01-11 06:39:46,021 | INFO     | --------------------------------------------------
[2026-01-11 07:40:18] 2026-01-11 06:39:46,021 | INFO     | 
[2026-01-11 07:40:18] 2026-01-11 06:39:46,021 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-11 07:40:18] 2026-01-11 06:39:46,035 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 07:40:18] 2026-01-11 06:39:46,036 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 07:40:18] 2026-01-11 06:39:46,036 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 07:40:18] 2026-01-11 06:39:46,036 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 07:40:18] 2026-01-11 06:39:46,036 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 07:40:18] 2026-01-11 06:39:46,036 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 07:40:18] 2026-01-11 06:39:46,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 07:40:18] 2026-01-11 06:39:46,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 07:40:18] 2026-01-11 06:39:46,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 07:40:18] 2026-01-11 06:39:46,036 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 07:40:18] 2026-01-11 06:39:46,036 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 07:40:18] 2026-01-11 06:39:46,036 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 07:40:18] 2026-01-11 06:39:46,036 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 07:40:18] 2026-01-11 06:39:46,036 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 07:40:18] 2026-01-11 06:39:46,036 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 07:40:18] 2026-01-11 06:39:46,037 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 07:40:18] 2026-01-11 06:39:46,037 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 07:40:18] 2026-01-11 06:39:46,037 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 07:40:18] 2026-01-11 06:39:46,037 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 07:40:18] 2026-01-11 06:39:46,037 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 07:40:18] 2026-01-11 06:39:46,037 | INFO     | job 6965390338 has completed (purged errors)
[2026-01-11 07:40:18] 2026-01-11 06:39:46,037 | INFO     | overall cleanup function is called
[2026-01-11 07:40:18] 2026-01-11 06:39:46,603 | INFO     | PID=2139236 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 07:40:18] 2026-01-11 06:39:46,603 | INFO     | .. there are 2 such processes running
[2026-01-11 07:40:18] 2026-01-11 06:39:47,046 | INFO     | --- collectZombieJob: --- 10, [2145940]
[2026-01-11 07:40:18] 2026-01-11 06:39:47,046 | INFO     | zombie collector waiting for pid 2145940
[2026-01-11 07:40:18] 2026-01-11 06:39:47,046 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 07:40:18] 2026-01-11 06:39:47,046 | INFO     | collected zombie processes
[2026-01-11 07:40:18] 2026-01-11 06:39:47,046 | INFO     | will attempt to kill all subprocesses of pid=2145940
[2026-01-11 07:40:18] 2026-01-11 06:39:47,136 | INFO     | process IDs to be killed: [2145940] (in reverse order)
[2026-01-11 07:40:18] 2026-01-11 06:39:47,173 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 07:40:18] 2026-01-11 06:39:47,173 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 07:40:18] 2026-01-11 06:39:47,177 | INFO     | did not find any defunct processes belonging to 2145940
[2026-01-11 07:40:18] 2026-01-11 06:39:47,179 | INFO     | did not find any defunct processes belonging to 2145940
[2026-01-11 07:40:18] 2026-01-11 06:39:47,179 | INFO     | ready for new job
[2026-01-11 07:40:18] 2026-01-11 06:39:47,180 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 07:40:18] 2026-01-11 06:39:47,180 | INFO     | ***************************************
[2026-01-11 07:40:18] 2026-01-11 06:39:47,180 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 07:40:18] 2026-01-11 06:39:47,181 | INFO     | ***************************************
[2026-01-11 07:40:18] 2026-01-11 06:39:47,181 | INFO     | 
[2026-01-11 07:40:18] 2026-01-11 06:39:47,182 | INFO     | architecture information:
[2026-01-11 07:40:18] 2026-01-11 06:39:47,182 | INFO     | executing command: cat /etc/os-release
[2026-01-11 07:40:18] 2026-01-11 06:39:47,193 | INFO     | cat /etc/os-release:
[2026-01-11 07:40:18] NAME="CentOS Linux"
[2026-01-11 07:40:18] VERSION="7 (Core)"
[2026-01-11 07:40:18] ID="centos"
[2026-01-11 07:40:18] ID_LIKE="rhel fedora"
[2026-01-11 07:40:18] VERSION_ID="7"
[2026-01-11 07:40:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 07:40:18] ANSI_COLOR="0;31"
[2026-01-11 07:40:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 07:40:18] HOME_URL="https://www.centos.org/"
[2026-01-11 07:40:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 07:40:18] 
[2026-01-11 07:40:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 07:40:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 07:40:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 07:40:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 07:40:18] 
[2026-01-11 07:40:18] 2026-01-11 06:39:47,193 | INFO     | ***************************************
[2026-01-11 07:40:18] 2026-01-11 06:39:47,696 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-11 07:40:18] 2026-01-11 06:39:47,711 | INFO     | sufficient remaining disk space (46198161408 B)
[2026-01-11 07:40:18] 2026-01-11 06:39:47,711 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 07:40:18] 2026-01-11 06:39:47,711 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 07:40:18] 2026-01-11 06:39:47,711 | INFO     | update_server=False
[2026-01-11 07:40:18] 2026-01-11 06:39:47,711 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 07:40:18] 2026-01-11 06:39:47,711 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 07:40:18] 2026-01-11 06:39:47,711 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:40:18] 2026-01-11 06:39:47,924 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:40:18] 2026-01-11 06:39:47,924 | INFO     | aborting loop
[2026-01-11 07:40:18] 2026-01-11 06:39:48,017 | INFO     | all payload control threads have been joined
[2026-01-11 07:40:18] 2026-01-11 06:39:48,121 | INFO     | all data control threads have been joined
[2026-01-11 07:40:18] 2026-01-11 06:39:48,713 | INFO     | [job] retrieve thread has finished
[2026-01-11 07:40:18] 2026-01-11 06:39:48,717 | INFO     | [job] queue monitor thread has finished
[2026-01-11 07:40:18] 2026-01-11 06:39:48,843 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 07:40:18] 2026-01-11 06:39:48,844 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 07:40:18] 2026-01-11 06:39:48,915 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 07:40:18] 2026-01-11 06:39:48,929 | INFO     | [job] job monitor thread has finished
[2026-01-11 07:40:18] 2026-01-11 06:39:49,022 | INFO     | [payload] control thread has finished
[2026-01-11 07:40:18] 2026-01-11 06:39:49,127 | INFO     | [data] control thread has finished
[2026-01-11 07:40:18] 2026-01-11 06:39:49,169 | INFO     | all job control threads have been joined
[2026-01-11 07:40:18] 2026-01-11 06:39:49,400 | INFO     | [payload] validate_post thread has finished
[2026-01-11 07:40:18] 2026-01-11 06:39:49,543 | INFO     | [payload] failed_post thread has finished
[2026-01-11 07:40:18] 2026-01-11 06:39:49,920 | INFO     | [job] validate thread has finished
[2026-01-11 07:40:18] 2026-01-11 06:39:49,945 | INFO     | [data] copytool_in thread has finished
[2026-01-11 07:40:18] 2026-01-11 06:39:50,135 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 07:40:18] 2026-01-11 06:39:50,172 | INFO     | [job] control thread has finished
[2026-01-11 07:40:18] 2026-01-11 06:39:50,921 | INFO     | [data] copytool_out thread has finished
[2026-01-11 07:40:18] 2026-01-11 06:39:51,717 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 07:40:18] 2026-01-11 06:39:56,494 | INFO     | [monitor] cgroup control has ended
[2026-01-11 07:40:18] 2026-01-11 06:39:58,291 | INFO     | job.realtimelogging is not enabled
[2026-01-11 07:40:18] 2026-01-11 06:39:59,296 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 07:40:18] 2026-01-11 06:40:00,229 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139966616041280)>', '<ExcThread(monitor, started 139966264895232)>']
[2026-01-11 07:40:18] 2026-01-11 06:40:05,254 | INFO     | all workflow threads have been joined
[2026-01-11 07:40:18] 2026-01-11 06:40:05,254 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 07:40:18] 2026-01-11 06:40:05,255 | INFO     | traces error code: 0
[2026-01-11 07:40:18] 2026-01-11 06:40:05,255 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 07:40:18] 2026-01-11 06:40:18,772 | INFO     | PID=2139236 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 07:40:18] 2026-01-11 06:40:18,773 | INFO     | .. there are 2 such processes running
[2026-01-11 07:40:18] 2026-01-11 06:40:18,773 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 07:40:18] 2026-01-11 06:40:18,773 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 07:40:18] 2026-01-11 06:40:18,773 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 07:40:18] 2026-01-11 06:40:18,773 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 07:40:18] 2026-01-11 06:40:18,773 | INFO     | [monitor] control thread has ended
[2026-01-11 07:40:18] 2026-01-11 06:40:18,839 [wrapper] ==== pilot stdout END ====
[2026-01-11 07:40:18] 2026-01-11 06:40:18,841 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 07:40:18] 2026-01-11 06:40:18,843 [wrapper] pilotpid: 2139236
[2026-01-11 07:40:18] 2026-01-11 06:40:18,845 [wrapper] Pilot exit status: 0
[2026-01-11 07:40:18] 2026-01-11 06:40:18,852 [wrapper] pandaids: 6965390338
[2026-01-11 07:40:18] 2026-01-11 06:40:18,878 [wrapper] cleanup supervisor_pilot 2198624 2139237
[2026-01-11 07:40:18] 2026-01-11 06:40:18,880 [wrapper] Test setup, not cleaning
[2026-01-11 07:40:18] 2026-01-11 06:40:18,882 [wrapper] apfmon messages muted
[2026-01-11 07:40:18] 2026-01-11 06:40:18,884 [wrapper] ==== wrapper stdout END ====
[2026-01-11 07:40:18] 2026-01-11 06:40:18,885 [wrapper] ==== wrapper stderr END ====
[2026-01-11 07:40:18]  *** Error codes and diagnostics ***
[2026-01-11 07:40:18]     "exeErrorCode": 0,
[2026-01-11 07:40:18]     "exeErrorDiag": "",
[2026-01-11 07:40:18]     "pilotErrorCode": 0,
[2026-01-11 07:40:18]     "pilotErrorDiag": "",
[2026-01-11 07:40:18]  *** Listing of results directory ***
[2026-01-11 07:40:18] total 1154512
[2026-01-11 07:40:18] -rw-r--r-- 1 boinc boinc      5112 Jan 10 14:29 queuedata.json
[2026-01-11 07:40:18] -rw-r--r-- 1 boinc boinc    579449 Jan 10 14:29 pilot3.tar.gz
[2026-01-11 07:40:18] -rwx------ 1 boinc boinc     36322 Jan 10 14:29 runpilot2-wrapper.sh
[2026-01-11 07:40:18] -rw-r--r-- 1 boinc boinc       100 Jan 11 06:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 07:40:18] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 06:43 run_atlas
[2026-01-11 07:40:18] -rw-r--r-- 1 boinc boinc       105 Jan 11 06:43 job.xml
[2026-01-11 07:40:18] -rw-r--r-- 1 boinc boinc      9456 Jan 11 06:43 init_data.xml
[2026-01-11 07:40:18] -rw-r--r-- 2 boinc boinc 921490926 Jan 11 06:43 EVNT.48039248._000045.pool.root.1
[2026-01-11 07:40:18] -rw-r--r-- 2 boinc boinc     15847 Jan 11 06:43 start_atlas.sh
[2026-01-11 07:40:18] drwxrwx--x 2 boinc boinc      4096 Jan 11 06:43 shared
[2026-01-11 07:40:18] -rw-r--r-- 2 boinc boinc    592424 Jan 11 06:43 input.tar.gz
[2026-01-11 07:40:18] -rw-r--r-- 1 boinc boinc         0 Jan 11 06:43 boinc_lockfile
[2026-01-11 07:40:18] -rw-r--r-- 1 boinc boinc      2591 Jan 11 06:43 pandaJob.out
[2026-01-11 07:40:18] -rw------- 1 boinc boinc    989548 Jan 11 06:43 agis_schedconf.cvmfs.json
[2026-01-11 07:40:18] -rw------- 1 boinc boinc   1516240 Jan 11 06:43 agis_ddmendpoints.agis.ALL.json
[2026-01-11 07:40:18] drwx------ 5 boinc boinc      4096 Jan 11 06:43 pilot3
[2026-01-11 07:40:18] -rw------- 1 boinc boinc 254948640 Jan 11 07:39 HITS.48039250._006748.pool.root.1
[2026-01-11 07:40:18] -rw------- 1 boinc boinc        95 Jan 11 07:39 pilot_heartbeat.json
[2026-01-11 07:40:18] -rw-r--r-- 1 boinc boinc       530 Jan 11 07:39 boinc_task_state.xml
[2026-01-11 07:40:18] -rw------- 1 boinc boinc      1014 Jan 11 07:39 memory_monitor_summary.json
[2026-01-11 07:40:18] -rw------- 1 boinc boinc    414112 Jan 11 07:39 log.48039250._006748.job.log.tgz.1
[2026-01-11 07:40:18] -rw------- 1 boinc boinc      7766 Jan 11 07:39 heartbeat.json
[2026-01-11 07:40:18] -rw-r--r-- 1 boinc boinc        27 Jan 11 07:40 wrapper_checkpoint.txt
[2026-01-11 07:40:18] -rw-r--r-- 1 boinc boinc      8192 Jan 11 07:40 boinc_mmap_file
[2026-01-11 07:40:18] -rw------- 1 boinc boinc       822 Jan 11 07:40 pilotlog.txt
[2026-01-11 07:40:18] -rw------- 1 boinc boinc    515069 Jan 11 07:40 log.48039250._006748.job.log.1
[2026-01-11 07:40:18] -rw------- 1 boinc boinc       357 Jan 11 07:40 output.list
[2026-01-11 07:40:18] -rw-r--r-- 1 boinc boinc       620 Jan 11 07:40 runtime_log
[2026-01-11 07:40:18] -rw------- 1 boinc boinc    952320 Jan 11 07:40 result.tar.gz
[2026-01-11 07:40:18] -rw------- 1 boinc boinc       659 Jan 11 07:40 VLaNDmRDoy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpsmKDmAaP80m.diag
[2026-01-11 07:40:18] -rw-r--r-- 1 boinc boinc      8854 Jan 11 07:40 runtime_log.err
[2026-01-11 07:40:18] -rw-r--r-- 1 boinc boinc     21884 Jan 11 07:40 stderr.txt
[2026-01-11 07:40:18] HITS file was successfully produced:
[2026-01-11 07:40:18] -rw------- 1 boinc boinc 254948640 Jan 11 07:39 shared/HITS.pool.root.1
[2026-01-11 07:40:18]  *** Contents of shared directory: ***
[2026-01-11 07:40:18] total 1150408
[2026-01-11 07:40:18] -rw-r--r-- 2 boinc boinc 921490926 Jan 11 06:43 ATLAS.root_0
[2026-01-11 07:40:18] -rw-r--r-- 2 boinc boinc     15847 Jan 11 06:43 start_atlas.sh
[2026-01-11 07:40:18] -rw-r--r-- 2 boinc boinc    592424 Jan 11 06:43 input.tar.gz
[2026-01-11 07:40:18] -rw------- 1 boinc boinc 254948640 Jan 11 07:39 HITS.pool.root.1
[2026-01-11 07:40:18] -rw------- 1 boinc boinc    952320 Jan 11 07:40 result.tar.gz
07:40:20 (2135349): run_atlas exited; CPU time 36707.884050
07:40:20 (2135349): called boinc_finish(0)

</stderr_txt>
]]>

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