Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:47:19 (2063151): wrapper (7.7.26015): starting
05:47:19 (2063151): wrapper: running run_atlas (--nthreads 12)
[2026-01-11 05:47:19] Arguments: --nthreads 12
[2026-01-11 05:47:19] Threads: 12
[2026-01-11 05:47:19] Checking for CVMFS
[2026-01-11 05:47:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 05:47:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 05:47:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 05:47:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 05:47:20] 2.13.3.0 4294 5003 115868 155004 0 188 39105817 46080001 922 130560 0 10730198 99.996 185949 927 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-11 05:47:20] CVMFS is ok
[2026-01-11 05:47:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 05:47:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 05:47:20] Further information can be found at the LHC@home message board.
[2026-01-11 05:47:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 05:47:20] Checking for apptainer binary...
[2026-01-11 05:47:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 05:47:20] Running /usr/bin/apptainer --version
[2026-01-11 05:47:20] apptainer version 1.4.5-2.el9
[2026-01-11 05:47:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 05:47:20] gpu01.farm.particle.cz
[2026-01-11 05:47:20] apptainer works
[2026-01-11 05:47:20] Set ATHENA_PROC_NUMBER=12
[2026-01-11 05:47:20] Set ATHENA_CORE_NUMBER=12
[2026-01-11 05:47:20] Starting ATLAS job with PandaID=6965390292
[2026-01-11 05:47:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 06:43:38]  *** The last 200 lines of the pilot log: ***
[2026-01-11 06:43:38]  mtime=0
[2026-01-11 06:43:38]  protocol_id=None
[2026-01-11 06:43:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-11 06:43:38]  replicas=None
[2026-01-11 06:43:38]  scope=mc23_13p6TeV
[2026-01-11 06:43:38]  status=None
[2026-01-11 06:43:38]  status_code=0
[2026-01-11 06:43:38]  storage_token=
[2026-01-11 06:43:38]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6965390292/log.48039250._006702.job.log.tgz.1
[2026-01-11 06:43:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/7f/log.48039250._006702.job.log.tgz.1
[2026-01-11 06:43:38]  workdir=None
[2026-01-11 06:43:38] ]
[2026-01-11 06:43:38] 2026-01-11 05:42:48,683 | INFO     | transferring file log.48039250._006702.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6965390292/log.48039250._006702.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-11 06:43:38] 2026-01-11 05:42:48,683 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6965390292/log.48039250._006702.job.log.tgz.1 /var/lib/boinc/slots/0/log.48039250._006702.job
[2026-01-11 06:43:38] 2026-01-11 05:42:48,697 | INFO     | adding to output.list: log.48039250._006702.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/7f/log.48039250._006702.job.log.tg
[2026-01-11 06:43:38] 2026-01-11 05:42:48,697 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 06:43:38] 2026-01-11 05:42:48,697 | INFO     | summary of transferred files:
[2026-01-11 06:43:38] 2026-01-11 05:42:48,698 | INFO     |  -- lfn=log.48039250._006702.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 06:43:38] 2026-01-11 05:42:48,698 | INFO     | stage-out finished correctly
[2026-01-11 06:43:38] 2026-01-11 05:42:48,749 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 06:43:38] 2026-01-11 05:42:49,532 | INFO     | monitor loop #254: job 0:6965390292 is in state 'finished'
[2026-01-11 06:43:38] 2026-01-11 05:42:49,532 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 06:43:38] 2026-01-11 05:42:49,899 | INFO     | time since job start (3322s) is within the limit (349056.0s)
[2026-01-11 06:43:38] 2026-01-11 05:42:50,743 | INFO     | job 6965390292 has state=finished
[2026-01-11 06:43:38] 2026-01-11 05:42:50,743 | INFO     | preparing for final server update for job 6965390292 in state='finished'
[2026-01-11 06:43:38] 2026-01-11 05:42:51,282 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-11 06:43:38] 2026-01-11 05:42:51,283 | INFO     | this job has now completed (state=finished)
[2026-01-11 06:43:38] 2026-01-11 05:42:51,283 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 06:43:38] 2026-01-11 05:42:51,283 | INFO     | log transfer has been attempted: DONE
[2026-01-11 06:43:38] 2026-01-11 05:42:51,283 | INFO     | job 6965390292 has finished - writing final server update
[2026-01-11 06:43:38] 2026-01-11 05:42:51,283 | INFO     | total number of processed events: 400 (read)
[2026-01-11 06:43:38] 2026-01-11 05:42:51,284 | INFO     | executing command: lscpu
[2026-01-11 06:43:38] 2026-01-11 05:42:51,309 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 06:43:38] 2026-01-11 05:42:51,905 | INFO     | time since job start (3324s) is within the limit (349056.0s)
[2026-01-11 06:43:38] 2026-01-11 05:42:52,035 | INFO     | monitor loop #255: job 0:6965390292 is in state 'finished'
[2026-01-11 06:43:38] 2026-01-11 05:42:52,035 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 06:43:38] 2026-01-11 05:42:53,910 | INFO     | time since job start (3326s) is within the limit (349056.0s)
[2026-01-11 06:43:38] 2026-01-11 05:42:53,945 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 06:43:38] 2026-01-11 05:42:53,948 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3214.46996875
[2026-01-11 06:43:38] 2026-01-11 05:42:53,952 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6965390292/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 06:43:38] 2026-01-11 05:42:53,952 | INFO     | extracted standard info from prmon json
[2026-01-11 06:43:38] 2026-01-11 05:42:53,952 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 06:43:38] 2026-01-11 05:42:53,952 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 06:43:38] 2026-01-11 05:42:53,953 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 06:43:38] 2026-01-11 05:42:53,953 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 06:43:38] 2026-01-11 05:42:53,953 | INFO     | fitting pss+swap vs Time
[2026-01-11 06:43:38] 2026-01-11 05:42:53,954 | INFO     | sum of square deviations: 34277852.0
[2026-01-11 06:43:38] 2026-01-11 05:42:53,954 | INFO     | sum of deviations: -2511443169.5
[2026-01-11 06:43:38] 2026-01-11 05:42:53,954 | INFO     | mean x: 1768108606.5
[2026-01-11 06:43:38] 2026-01-11 05:42:53,954 | INFO     | mean y: 2833528.3125
[2026-01-11 06:43:38] 2026-01-11 05:42:53,954 | INFO     | intersect: 129547248467.98224
[2026-01-11 06:43:38] 2026-01-11 05:42:53,954 | INFO     | chi2: 0.019099394845984094
[2026-01-11 06:43:38] 2026-01-11 05:42:53,954 | INFO     | current memory leak: -73.27 B/s (using 48 data points, chi2=0.02)
[2026-01-11 06:43:38] 2026-01-11 05:42:53,954 | INFO     | could have reported an average CPU frequency of 3237 MHz (5 samples)
[2026-01-11 06:43:38] 2026-01-11 05:42:53,954 | INFO     | ..............................
[2026-01-11 06:43:38] 2026-01-11 05:42:53,954 | INFO     | . Timing measurements:
[2026-01-11 06:43:38] 2026-01-11 05:42:53,954 | INFO     | . get job = 0 s
[2026-01-11 06:43:38] 2026-01-11 05:42:53,954 | INFO     | . initial setup = 2 s
[2026-01-11 06:43:38] 2026-01-11 05:42:53,954 | INFO     | . payload setup = 3 s
[2026-01-11 06:43:38] 2026-01-11 05:42:53,954 | INFO     | . stage-in = 0 s
[2026-01-11 06:43:38] 2026-01-11 05:42:53,954 | INFO     | . payload execution = 3299 s
[2026-01-11 06:43:38] 2026-01-11 05:42:53,955 | INFO     | . stage-out = 0 s
[2026-01-11 06:43:38] 2026-01-11 05:42:53,955 | INFO     | . log creation = 0 s
[2026-01-11 06:43:38] 2026-01-11 05:42:53,955 | INFO     | ..............................
[2026-01-11 06:43:38] 2026-01-11 05:42:54,489 | INFO     | 
[2026-01-11 06:43:38] 2026-01-11 05:42:54,490 | INFO     | job summary report
[2026-01-11 06:43:38] 2026-01-11 05:42:54,490 | INFO     | --------------------------------------------------
[2026-01-11 06:43:38] 2026-01-11 05:42:54,490 | INFO     | PanDA job id: 6965390292
[2026-01-11 06:43:38] 2026-01-11 05:42:54,490 | INFO     | task id: 48039250
[2026-01-11 06:43:38] 2026-01-11 05:42:54,490 | INFO     | errors: (none)
[2026-01-11 06:43:38] 2026-01-11 05:42:54,490 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 06:43:38] 2026-01-11 05:42:54,490 | INFO     | pilot state: finished 
[2026-01-11 06:43:38] 2026-01-11 05:42:54,490 | INFO     | transexitcode: 0
[2026-01-11 06:43:38] 2026-01-11 05:42:54,490 | INFO     | exeerrorcode: 0
[2026-01-11 06:43:38] 2026-01-11 05:42:54,490 | INFO     | exeerrordiag: 
[2026-01-11 06:43:38] 2026-01-11 05:42:54,490 | INFO     | exitcode: 0
[2026-01-11 06:43:38] 2026-01-11 05:42:54,490 | INFO     | exitmsg: OK
[2026-01-11 06:43:38] 2026-01-11 05:42:54,490 | INFO     | cpuconsumptiontime: 36746 s
[2026-01-11 06:43:38] 2026-01-11 05:42:54,490 | INFO     | nevents: 400
[2026-01-11 06:43:38] 2026-01-11 05:42:54,490 | INFO     | neventsw: 0
[2026-01-11 06:43:38] 2026-01-11 05:42:54,490 | INFO     | pid: 2073696
[2026-01-11 06:43:38] 2026-01-11 05:42:54,490 | INFO     | pgrp: 2073696
[2026-01-11 06:43:38] 2026-01-11 05:42:54,490 | INFO     | corecount: 12
[2026-01-11 06:43:38] 2026-01-11 05:42:54,490 | INFO     | event service: False
[2026-01-11 06:43:38] 2026-01-11 05:42:54,490 | INFO     | sizes: {0: 2283247, 1: 2284103, 4: 2284365, 11: 2284393, 3307: 2310073, 3308: 2319255, 3313: 2319425}
[2026-01-11 06:43:38] 2026-01-11 05:42:54,490 | INFO     | --------------------------------------------------
[2026-01-11 06:43:38] 2026-01-11 05:42:54,490 | INFO     | 
[2026-01-11 06:43:38] 2026-01-11 05:42:54,491 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-11 06:43:38] 2026-01-11 05:42:54,504 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 06:43:38] 2026-01-11 05:42:54,504 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 06:43:38] 2026-01-11 05:42:54,504 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 06:43:38] 2026-01-11 05:42:54,504 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 06:43:38] 2026-01-11 05:42:54,504 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 06:43:38] 2026-01-11 05:42:54,504 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 06:43:38] 2026-01-11 05:42:54,505 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 06:43:38] 2026-01-11 05:42:54,505 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 06:43:38] 2026-01-11 05:42:54,505 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 06:43:38] 2026-01-11 05:42:54,505 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 06:43:38] 2026-01-11 05:42:54,505 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 06:43:38] 2026-01-11 05:42:54,505 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 06:43:38] 2026-01-11 05:42:54,505 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 06:43:38] 2026-01-11 05:42:54,505 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 06:43:38] 2026-01-11 05:42:54,505 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 06:43:38] 2026-01-11 05:42:54,505 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 06:43:38] 2026-01-11 05:42:54,505 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 06:43:38] 2026-01-11 05:42:54,505 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 06:43:38] 2026-01-11 05:42:54,505 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 06:43:38] 2026-01-11 05:42:54,506 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 06:43:38] 2026-01-11 05:42:54,506 | INFO     | job 6965390292 has completed (purged errors)
[2026-01-11 06:43:38] 2026-01-11 05:42:54,506 | INFO     | overall cleanup function is called
[2026-01-11 06:43:38] 2026-01-11 05:42:55,514 | INFO     | --- collectZombieJob: --- 10, [2073696]
[2026-01-11 06:43:38] 2026-01-11 05:42:55,515 | INFO     | zombie collector waiting for pid 2073696
[2026-01-11 06:43:38] 2026-01-11 05:42:55,515 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 06:43:38] 2026-01-11 05:42:55,515 | INFO     | collected zombie processes
[2026-01-11 06:43:38] 2026-01-11 05:42:55,515 | INFO     | will attempt to kill all subprocesses of pid=2073696
[2026-01-11 06:43:38] 2026-01-11 05:42:55,606 | INFO     | process IDs to be killed: [2073696] (in reverse order)
[2026-01-11 06:43:38] 2026-01-11 05:42:55,645 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 06:43:38] 2026-01-11 05:42:55,645 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 06:43:38] 2026-01-11 05:42:55,648 | INFO     | did not find any defunct processes belonging to 2073696
[2026-01-11 06:43:38] 2026-01-11 05:42:55,651 | INFO     | did not find any defunct processes belonging to 2073696
[2026-01-11 06:43:38] 2026-01-11 05:42:55,651 | INFO     | ready for new job
[2026-01-11 06:43:38] 2026-01-11 05:42:55,651 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 06:43:38] 2026-01-11 05:42:55,652 | INFO     | ***************************************
[2026-01-11 06:43:38] 2026-01-11 05:42:55,652 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 06:43:38] 2026-01-11 05:42:55,652 | INFO     | ***************************************
[2026-01-11 06:43:38] 2026-01-11 05:42:55,652 | INFO     | 
[2026-01-11 06:43:38] 2026-01-11 05:42:55,653 | INFO     | architecture information:
[2026-01-11 06:43:38] 2026-01-11 05:42:55,654 | INFO     | executing command: cat /etc/os-release
[2026-01-11 06:43:38] 2026-01-11 05:42:55,665 | INFO     | cat /etc/os-release:
[2026-01-11 06:43:38] NAME="CentOS Linux"
[2026-01-11 06:43:38] VERSION="7 (Core)"
[2026-01-11 06:43:38] ID="centos"
[2026-01-11 06:43:38] ID_LIKE="rhel fedora"
[2026-01-11 06:43:38] VERSION_ID="7"
[2026-01-11 06:43:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 06:43:38] ANSI_COLOR="0;31"
[2026-01-11 06:43:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 06:43:38] HOME_URL="https://www.centos.org/"
[2026-01-11 06:43:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 06:43:38] 
[2026-01-11 06:43:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 06:43:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 06:43:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 06:43:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 06:43:38] 
[2026-01-11 06:43:38] 2026-01-11 05:42:55,665 | INFO     | ***************************************
[2026-01-11 06:43:38] 2026-01-11 05:42:56,168 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-11 06:43:38] 2026-01-11 05:42:56,180 | INFO     | sufficient remaining disk space (44365250560 B)
[2026-01-11 06:43:38] 2026-01-11 05:42:56,180 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 06:43:38] 2026-01-11 05:42:56,180 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 06:43:38] 2026-01-11 05:42:56,180 | INFO     | update_server=False
[2026-01-11 06:43:38] 2026-01-11 05:42:56,180 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 06:43:38] 2026-01-11 05:42:56,180 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 06:43:38] 2026-01-11 05:42:56,181 | INFO     | aborting loop
[2026-01-11 06:43:38] 2026-01-11 05:42:56,456 | INFO     | all payload control threads have been joined
[2026-01-11 06:43:38] 2026-01-11 05:42:56,759 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 06:43:38] 2026-01-11 05:42:56,922 | INFO     | all data control threads have been joined
[2026-01-11 06:43:38] 2026-01-11 05:42:57,026 | INFO     | all job control threads have been joined
[2026-01-11 06:43:38] 2026-01-11 05:42:57,186 | INFO     | [job] retrieve thread has finished
[2026-01-11 06:43:38] 2026-01-11 05:42:57,186 | INFO     | [job] job monitor thread has finished
[2026-01-11 06:43:38] 2026-01-11 05:42:57,189 | INFO     | [payload] validate_post thread has finished
[2026-01-11 06:43:38] 2026-01-11 05:42:57,329 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 06:43:38] 2026-01-11 05:42:57,461 | INFO     | [payload] control thread has finished
[2026-01-11 06:43:38] 2026-01-11 05:42:57,870 | INFO     | [payload] failed_post thread has finished
[2026-01-11 06:43:38] 2026-01-11 05:42:57,927 | INFO     | [data] control thread has finished
[2026-01-11 06:43:38] 2026-01-11 05:42:58,032 | INFO     | [job] control thread has finished
[2026-01-11 06:43:38] 2026-01-11 05:42:58,143 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 06:43:38] 2026-01-11 05:42:58,522 | INFO     | [job] validate thread has finished
[2026-01-11 06:43:38] 2026-01-11 05:42:58,608 | INFO     | [data] copytool_in thread has finished
[2026-01-11 06:43:38] 2026-01-11 05:42:58,659 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 06:43:38] 2026-01-11 05:42:58,765 | INFO     | [data] copytool_out thread has finished
[2026-01-11 06:43:38] 2026-01-11 05:42:59,016 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 06:43:38] 2026-01-11 05:42:59,333 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 06:43:38] 2026-01-11 05:43:00,022 | INFO     | [job] queue monitor thread has finished
[2026-01-11 06:43:38] 2026-01-11 05:43:03,338 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 06:43:38] 2026-01-11 05:43:06,759 | INFO     | job.realtimelogging is not enabled
[2026-01-11 06:43:38] 2026-01-11 05:43:07,764 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 06:43:38] 2026-01-11 05:43:27,089 | INFO     | PID=2067019 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 06:43:38] 2026-01-11 05:43:27,090 | INFO     | .. there are 2 such processes running
[2026-01-11 06:43:38] 2026-01-11 05:43:27,090 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 06:43:38] 2026-01-11 05:43:27,090 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 06:43:38] 2026-01-11 05:43:27,090 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 06:43:38] 2026-01-11 05:43:32,298 | INFO     | [monitor] cgroup control has ended
[2026-01-11 06:43:38] 2026-01-11 05:43:32,843 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140281806657344)>', '<ExcThread(monitor, started 140281450051328)>']
[2026-01-11 06:43:38] 2026-01-11 05:43:33,120 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 06:43:38] 2026-01-11 05:43:33,121 | INFO     | [monitor] control thread has ended
[2026-01-11 06:43:38] 2026-01-11 05:43:37,859 | INFO     | all workflow threads have been joined
[2026-01-11 06:43:38] 2026-01-11 05:43:37,859 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 06:43:38] 2026-01-11 05:43:37,860 | INFO     | traces error code: 0
[2026-01-11 06:43:38] 2026-01-11 05:43:37,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 06:43:38] 2026-01-11 05:43:37,927 [wrapper] ==== pilot stdout END ====
[2026-01-11 06:43:38] 2026-01-11 05:43:37,929 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 06:43:38] 2026-01-11 05:43:37,931 [wrapper] pilotpid: 2067019
[2026-01-11 06:43:38] 2026-01-11 05:43:37,933 [wrapper] Pilot exit status: 0
[2026-01-11 06:43:38] 2026-01-11 05:43:37,940 [wrapper] pandaids: 6965390292
[2026-01-11 06:43:38] 2026-01-11 05:43:37,966 [wrapper] cleanup supervisor_pilot 2125204 2067020
[2026-01-11 06:43:38] 2026-01-11 05:43:37,968 [wrapper] Test setup, not cleaning
[2026-01-11 06:43:38] 2026-01-11 05:43:37,969 [wrapper] apfmon messages muted
[2026-01-11 06:43:38] 2026-01-11 05:43:37,971 [wrapper] ==== wrapper stdout END ====
[2026-01-11 06:43:38] 2026-01-11 05:43:37,973 [wrapper] ==== wrapper stderr END ====
[2026-01-11 06:43:38]  *** Error codes and diagnostics ***
[2026-01-11 06:43:38]     "exeErrorCode": 0,
[2026-01-11 06:43:38]     "exeErrorDiag": "",
[2026-01-11 06:43:38]     "pilotErrorCode": 0,
[2026-01-11 06:43:38]     "pilotErrorDiag": "",
[2026-01-11 06:43:38]  *** Listing of results directory ***
[2026-01-11 06:43:38] total 1157144
[2026-01-11 06:43:38] -rw-r--r-- 1 boinc boinc      5112 Jan 10 14:29 queuedata.json
[2026-01-11 06:43:38] -rw-r--r-- 1 boinc boinc    579449 Jan 10 14:29 pilot3.tar.gz
[2026-01-11 06:43:38] -rwx------ 1 boinc boinc     36322 Jan 10 14:29 runpilot2-wrapper.sh
[2026-01-11 06:43:38] -rw-r--r-- 1 boinc boinc       100 Jan 11 05:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 06:43:38] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 05:47 run_atlas
[2026-01-11 06:43:38] -rw-r--r-- 1 boinc boinc       105 Jan 11 05:47 job.xml
[2026-01-11 06:43:38] -rw-r--r-- 2 boinc boinc 921926470 Jan 11 05:47 EVNT.48039248._000043.pool.root.1
[2026-01-11 06:43:38] -rw-r--r-- 2 boinc boinc     15847 Jan 11 05:47 start_atlas.sh
[2026-01-11 06:43:38] drwxrwx--x 2 boinc boinc      4096 Jan 11 05:47 shared
[2026-01-11 06:43:38] -rw-r--r-- 2 boinc boinc    592422 Jan 11 05:47 input.tar.gz
[2026-01-11 06:43:38] -rw-r--r-- 1 boinc boinc      9456 Jan 11 05:47 init_data.xml
[2026-01-11 06:43:38] -rw-r--r-- 1 boinc boinc         0 Jan 11 05:47 boinc_lockfile
[2026-01-11 06:43:38] -rw-r--r-- 1 boinc boinc      2591 Jan 11 05:47 pandaJob.out
[2026-01-11 06:43:38] -rw------- 1 boinc boinc    989548 Jan 11 05:47 agis_schedconf.cvmfs.json
[2026-01-11 06:43:38] -rw------- 1 boinc boinc   1516240 Jan 11 05:47 agis_ddmendpoints.agis.ALL.json
[2026-01-11 06:43:38] drwx------ 5 boinc boinc      4096 Jan 11 05:47 pilot3
[2026-01-11 06:43:38] -rw------- 1 boinc boinc 257241452 Jan 11 06:42 HITS.48039250._006702.pool.root.1
[2026-01-11 06:43:38] -rw-r--r-- 1 boinc boinc       530 Jan 11 06:42 boinc_task_state.xml
[2026-01-11 06:43:38] -rw------- 1 boinc boinc      1014 Jan 11 06:42 memory_monitor_summary.json
[2026-01-11 06:43:38] -rw------- 1 boinc boinc    404643 Jan 11 06:42 log.48039250._006702.job.log.tgz.1
[2026-01-11 06:43:38] -rw------- 1 boinc boinc      7768 Jan 11 06:42 heartbeat.json
[2026-01-11 06:43:38] -rw------- 1 boinc boinc        95 Jan 11 06:43 pilot_heartbeat.json
[2026-01-11 06:43:38] -rw-r--r-- 1 boinc boinc        27 Jan 11 06:43 wrapper_checkpoint.txt
[2026-01-11 06:43:38] -rw-r--r-- 1 boinc boinc      8192 Jan 11 06:43 boinc_mmap_file
[2026-01-11 06:43:38] -rw------- 1 boinc boinc      4895 Jan 11 06:43 pilotlog.txt
[2026-01-11 06:43:38] -rw------- 1 boinc boinc    511263 Jan 11 06:43 log.48039250._006702.job.log.1
[2026-01-11 06:43:38] -rw------- 1 boinc boinc       357 Jan 11 06:43 output.list
[2026-01-11 06:43:38] -rw-r--r-- 1 boinc boinc       620 Jan 11 06:43 runtime_log
[2026-01-11 06:43:38] -rw------- 1 boinc boinc    931840 Jan 11 06:43 result.tar.gz
[2026-01-11 06:43:38] -rw------- 1 boinc boinc       659 Jan 11 06:43 WDTMDmRDoy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm7rmKDmPkyqXn.diag
[2026-01-11 06:43:38] -rw-r--r-- 1 boinc boinc      8854 Jan 11 06:43 runtime_log.err
[2026-01-11 06:43:38] -rw-r--r-- 1 boinc boinc     21718 Jan 11 06:43 stderr.txt
[2026-01-11 06:43:38] HITS file was successfully produced:
[2026-01-11 06:43:38] -rw------- 1 boinc boinc 257241452 Jan 11 06:42 shared/HITS.pool.root.1
[2026-01-11 06:43:38]  *** Contents of shared directory: ***
[2026-01-11 06:43:38] total 1153052
[2026-01-11 06:43:38] -rw-r--r-- 2 boinc boinc 921926470 Jan 11 05:47 ATLAS.root_0
[2026-01-11 06:43:38] -rw-r--r-- 2 boinc boinc     15847 Jan 11 05:47 start_atlas.sh
[2026-01-11 06:43:38] -rw-r--r-- 2 boinc boinc    592422 Jan 11 05:47 input.tar.gz
[2026-01-11 06:43:38] -rw------- 1 boinc boinc 257241452 Jan 11 06:42 HITS.pool.root.1
[2026-01-11 06:43:38] -rw------- 1 boinc boinc    931840 Jan 11 06:43 result.tar.gz
06:43:39 (2063151): run_atlas exited; CPU time 36773.629057
06:43:39 (2063151): called boinc_finish(0)

</stderr_txt>
]]>

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