Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:03:49 (984514): wrapper (7.7.26015): starting
09:03:49 (984514): wrapper: running run_atlas (--nthreads 10)
[2026-01-10 09:03:49] Arguments: --nthreads 10
[2026-01-10 09:03:49] Threads: 10
[2026-01-10 09:03:49] Checking for CVMFS
[2026-01-10 09:03:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 09:03:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 09:03:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 09:03:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 09:03:50] 2.13.3.0 9601 34214 256592 154981 0 420 30558150 32935937 12760 16776704 0 27720824 99.751 36414380 43706 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 09:03:50] CVMFS is ok
[2026-01-10 09:03:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 09:03:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 09:03:50] Further information can be found at the LHC@home message board.
[2026-01-10 09:03:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 09:03:50] Checking for apptainer binary...
[2026-01-10 09:03:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 09:03:50] Running /usr/bin/apptainer --version
[2026-01-10 09:03:50] apptainer version 1.4.5-2.el9
[2026-01-10 09:03:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 09:03:50] c6-5-7-2.aglt2.org
[2026-01-10 09:03:50] apptainer works
[2026-01-10 09:03:50] Set ATHENA_PROC_NUMBER=10
[2026-01-10 09:03:50] Set ATHENA_CORE_NUMBER=10
[2026-01-10 09:03:50] Starting ATLAS job with PandaID=6965390283
[2026-01-10 09:03:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 10:55:26]  *** The last 200 lines of the pilot log: ***
[2026-01-10 10:55:26] 2026-01-10 15:54:46,347 | INFO     | intersect: 31187218100.123596
[2026-01-10 10:55:26] 2026-01-10 15:54:46,347 | INFO     | chi2: 0.09256994117506186
[2026-01-10 10:55:26] 2026-01-10 15:54:46,347 | INFO     | current chi2=0.09256994117506186 (change=93.87666095378407 %)
[2026-01-10 10:55:26] 2026-01-10 15:54:46,347 | INFO     | sum of square deviations: 291834235.10204047
[2026-01-10 10:55:26] 2026-01-10 15:54:46,348 | INFO     | sum of deviations: -1199881033.8979588
[2026-01-10 10:55:26] 2026-01-10 15:54:46,348 | INFO     | mean x: 1768057459.7346938
[2026-01-10 10:55:26] 2026-01-10 15:54:46,348 | INFO     | mean y: 2702601.2346938774
[2026-01-10 10:55:26] 2026-01-10 15:54:46,348 | INFO     | intersect: 7272098571.983945
[2026-01-10 10:55:26] 2026-01-10 15:54:46,348 | INFO     | chi2: 0.04255900346761547
[2026-01-10 10:55:26] 2026-01-10 15:54:46,348 | INFO     | current chi2=0.04255900346761547 (change=54.0250291537608 %)
[2026-01-10 10:55:26] 2026-01-10 15:54:46,348 | INFO     | sum of square deviations: 249398517.31182763
[2026-01-10 10:55:26] 2026-01-10 15:54:46,348 | INFO     | sum of deviations: 873033955.0752692
[2026-01-10 10:55:26] 2026-01-10 15:54:46,349 | INFO     | mean x: 1768057612.2473118
[2026-01-10 10:55:26] 2026-01-10 15:54:46,349 | INFO     | mean y: 2695423.301075269
[2026-01-10 10:55:26] 2026-01-10 15:54:46,349 | INFO     | intersect: -6186492654.714832
[2026-01-10 10:55:26] 2026-01-10 15:54:46,349 | INFO     | chi2: 0.0006281574174712206
[2026-01-10 10:55:26] 2026-01-10 15:54:46,349 | INFO     | current chi2=0.0006281574174712206 (change=98.52403165889632 %)
[2026-01-10 10:55:26] 2026-01-10 15:54:46,349 | INFO     | sum of square deviations: 211288461.98863629
[2026-01-10 10:55:26] 2026-01-10 15:54:46,349 | INFO     | sum of deviations: 534716658.2272726
[2026-01-10 10:55:26] 2026-01-10 15:54:46,350 | INFO     | mean x: 1768057764.7613637
[2026-01-10 10:55:26] 2026-01-10 15:54:46,350 | INFO     | mean y: 2696773.772727273
[2026-01-10 10:55:26] 2026-01-10 15:54:46,350 | INFO     | intersect: -4471801883.786836
[2026-01-10 10:55:26] 2026-01-10 15:54:46,350 | INFO     | chi2: 0.0004444683163524992
[2026-01-10 10:55:26] 2026-01-10 15:54:46,350 | INFO     | current chi2=0.0004444683163524992 (change=29.242526794987217 %)
[2026-01-10 10:55:26] 2026-01-10 15:54:46,350 | INFO     | sum of square deviations: 177271506.62650594
[2026-01-10 10:55:26] 2026-01-10 15:54:46,350 | INFO     | sum of deviations: 254901467.27710846
[2026-01-10 10:55:26] 2026-01-10 15:54:46,350 | INFO     | mean x: 1768057917.2771084
[2026-01-10 10:55:26] 2026-01-10 15:54:46,351 | INFO     | mean y: 2698028.987951807
[2026-01-10 10:55:26] 2026-01-10 15:54:46,351 | INFO     | intersect: -2539620056.5371184
[2026-01-10 10:55:26] 2026-01-10 15:54:46,351 | INFO     | chi2: 0.000262423311054103
[2026-01-10 10:55:26] 2026-01-10 15:54:46,351 | INFO     | current chi2=0.000262423311054103 (change=40.957926268476655 %)
[2026-01-10 10:55:26] 2026-01-10 15:54:46,351 | INFO     | sum of square deviations: 147125335.84615418
[2026-01-10 10:55:26] 2026-01-10 15:54:46,351 | INFO     | sum of deviations: 133683209.92307693
[2026-01-10 10:55:26] 2026-01-10 15:54:46,351 | INFO     | mean x: 1768058069.7692308
[2026-01-10 10:55:26] 2026-01-10 15:54:46,351 | INFO     | mean y: 2698627.8846153845
[2026-01-10 10:55:26] 2026-01-10 15:54:46,351 | INFO     | intersect: -1603820580.6377463
[2026-01-10 10:55:26] 2026-01-10 15:54:46,352 | INFO     | chi2: 0.0001916015858291253
[2026-01-10 10:55:26] 2026-01-10 15:54:46,352 | INFO     | current chi2=0.0001916015858291253 (change=26.98758922768741 %)
[2026-01-10 10:55:26] 2026-01-10 15:54:46,352 | INFO     | sum of square deviations: 120602382.52054775
[2026-01-10 10:55:26] 2026-01-10 15:54:46,352 | INFO     | sum of deviations: 92576639.12328765
[2026-01-10 10:55:26] 2026-01-10 15:54:46,352 | INFO     | mean x: 1768058222.2739725
[2026-01-10 10:55:26] 2026-01-10 15:54:46,352 | INFO     | mean y: 2698864.6438356163
[2026-01-10 10:55:26] 2026-01-10 15:54:46,352 | INFO     | intersect: -1354495616.6885026
[2026-01-10 10:55:26] 2026-01-10 15:54:46,353 | INFO     | chi2: 0.00018964917290368837
[2026-01-10 10:55:26] 2026-01-10 15:54:46,353 | INFO     | current chi2=0.00018964917290368837 (change=1.0189962243726576 %)
[2026-01-10 10:55:26] 2026-01-10 15:54:46,353 | INFO     | left removable region: 70
[2026-01-10 10:55:26] 2026-01-10 15:54:46,353 | INFO     | sum of square deviations: 10146317.21875
[2026-01-10 10:55:26] 2026-01-10 15:54:46,353 | INFO     | sum of deviations: 36646871.53125
[2026-01-10 10:55:26] 2026-01-10 15:54:46,353 | INFO     | mean x: 1768059106.65625
[2026-01-10 10:55:26] 2026-01-10 15:54:46,353 | INFO     | mean y: 2699140.59375
[2026-01-10 10:55:26] 2026-01-10 15:54:46,353 | INFO     | intersect: -6383246966.191848
[2026-01-10 10:55:26] 2026-01-10 15:54:46,353 | INFO     | chi2: 1.616866528934946e-05
[2026-01-10 10:55:26] 2026-01-10 15:54:46,353 | INFO     | current memory leak: 3.61 B/s (using 32 data points, chi2=0.00)
[2026-01-10 10:55:26] 2026-01-10 15:54:46,354 | INFO     | could have reported an average CPU frequency of 3065 MHz (7 samples)
[2026-01-10 10:55:26] 2026-01-10 15:54:46,354 | INFO     | ..............................
[2026-01-10 10:55:26] 2026-01-10 15:54:46,354 | INFO     | . Timing measurements:
[2026-01-10 10:55:26] 2026-01-10 15:54:46,354 | INFO     | . get job = 0 s
[2026-01-10 10:55:26] 2026-01-10 15:54:46,354 | INFO     | . initial setup = 2 s
[2026-01-10 10:55:26] 2026-01-10 15:54:46,354 | INFO     | . payload setup = 11 s
[2026-01-10 10:55:26] 2026-01-10 15:54:46,354 | INFO     | . stage-in = 0 s
[2026-01-10 10:55:26] 2026-01-10 15:54:46,354 | INFO     | . payload execution = 6589 s
[2026-01-10 10:55:26] 2026-01-10 15:54:46,354 | INFO     | . stage-out = 1 s
[2026-01-10 10:55:26] 2026-01-10 15:54:46,354 | INFO     | . log creation = 0 s
[2026-01-10 10:55:26] 2026-01-10 15:54:46,354 | INFO     | ..............................
[2026-01-10 10:55:26] 2026-01-10 15:54:46,569 | INFO     | 
[2026-01-10 10:55:26] 2026-01-10 15:54:46,570 | INFO     | job summary report
[2026-01-10 10:55:26] 2026-01-10 15:54:46,570 | INFO     | --------------------------------------------------
[2026-01-10 10:55:26] 2026-01-10 15:54:46,570 | INFO     | PanDA job id: 6965390283
[2026-01-10 10:55:26] 2026-01-10 15:54:46,570 | INFO     | task id: 48039250
[2026-01-10 10:55:26] 2026-01-10 15:54:46,570 | INFO     | errors: (none)
[2026-01-10 10:55:26] 2026-01-10 15:54:46,570 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 10:55:26] 2026-01-10 15:54:46,570 | INFO     | pilot state: finished 
[2026-01-10 10:55:26] 2026-01-10 15:54:46,570 | INFO     | transexitcode: 0
[2026-01-10 10:55:26] 2026-01-10 15:54:46,570 | INFO     | exeerrorcode: 0
[2026-01-10 10:55:26] 2026-01-10 15:54:46,570 | INFO     | exeerrordiag: 
[2026-01-10 10:55:26] 2026-01-10 15:54:46,570 | INFO     | exitcode: 0
[2026-01-10 10:55:26] 2026-01-10 15:54:46,570 | INFO     | exitmsg: OK
[2026-01-10 10:55:26] 2026-01-10 15:54:46,570 | INFO     | cpuconsumptiontime: 51242 s
[2026-01-10 10:55:26] 2026-01-10 15:54:46,570 | INFO     | nevents: 400
[2026-01-10 10:55:26] 2026-01-10 15:54:46,571 | INFO     | neventsw: 0
[2026-01-10 10:55:26] 2026-01-10 15:54:46,571 | INFO     | pid: 995254
[2026-01-10 10:55:26] 2026-01-10 15:54:46,571 | INFO     | pgrp: 995254
[2026-01-10 10:55:26] 2026-01-10 15:54:46,571 | INFO     | corecount: 10
[2026-01-10 10:55:26] 2026-01-10 15:54:46,571 | INFO     | event service: False
[2026-01-10 10:55:26] 2026-01-10 15:54:46,571 | INFO     | sizes: {0: 2283902, 1: 2284101, 9: 2284363, 12: 2284391, 6604: 2311362, 6606: 2320360, 6609: 2320544, 6618: 2320738}
[2026-01-10 10:55:26] 2026-01-10 15:54:46,571 | INFO     | --------------------------------------------------
[2026-01-10 10:55:26] 2026-01-10 15:54:46,571 | INFO     | 
[2026-01-10 10:55:26] 2026-01-10 15:54:46,571 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 10:55:26] 2026-01-10 15:54:46,594 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 10:55:26] 2026-01-10 15:54:46,594 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 10:55:26] 2026-01-10 15:54:46,595 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 10:55:26] 2026-01-10 15:54:46,595 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 10:55:26] 2026-01-10 15:54:46,595 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 10:55:26] 2026-01-10 15:54:46,595 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 10:55:26] 2026-01-10 15:54:46,595 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 10:55:26] 2026-01-10 15:54:46,595 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 10:55:26] 2026-01-10 15:54:46,595 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 10:55:26] 2026-01-10 15:54:46,595 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 10:55:26] 2026-01-10 15:54:46,595 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 10:55:26] 2026-01-10 15:54:46,595 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 10:55:26] 2026-01-10 15:54:46,595 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 10:55:26] 2026-01-10 15:54:46,595 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 10:55:26] 2026-01-10 15:54:46,595 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 10:55:26] 2026-01-10 15:54:46,595 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 10:55:26] 2026-01-10 15:54:46,596 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 10:55:26] 2026-01-10 15:54:46,596 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 10:55:26] 2026-01-10 15:54:46,596 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 10:55:26] 2026-01-10 15:54:46,596 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 10:55:26] 2026-01-10 15:54:46,596 | INFO     | job 6965390283 has completed (purged errors)
[2026-01-10 10:55:26] 2026-01-10 15:54:46,596 | INFO     | overall cleanup function is called
[2026-01-10 10:55:26] 2026-01-10 15:54:47,604 | INFO     | --- collectZombieJob: --- 10, [995254]
[2026-01-10 10:55:26] 2026-01-10 15:54:47,605 | INFO     | zombie collector waiting for pid 995254
[2026-01-10 10:55:26] 2026-01-10 15:54:47,605 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 10:55:26] 2026-01-10 15:54:47,605 | INFO     | collected zombie processes
[2026-01-10 10:55:26] 2026-01-10 15:54:47,605 | INFO     | will attempt to kill all subprocesses of pid=995254
[2026-01-10 10:55:26] 2026-01-10 15:54:47,808 | INFO     | process IDs to be killed: [995254] (in reverse order)
[2026-01-10 10:55:26] 2026-01-10 15:54:47,900 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 10:55:26] 2026-01-10 15:54:47,900 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 10:55:26] 2026-01-10 15:54:47,925 | INFO     | did not find any defunct processes belonging to 995254
[2026-01-10 10:55:26] 2026-01-10 15:54:47,939 | INFO     | did not find any defunct processes belonging to 995254
[2026-01-10 10:55:26] 2026-01-10 15:54:47,939 | INFO     | ready for new job
[2026-01-10 10:55:26] 2026-01-10 15:54:47,939 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 10:55:26] 2026-01-10 15:54:47,941 | INFO     | ***************************************
[2026-01-10 10:55:26] 2026-01-10 15:54:47,941 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 10:55:26] 2026-01-10 15:54:47,941 | INFO     | ***************************************
[2026-01-10 10:55:26] 2026-01-10 15:54:47,941 | INFO     | 
[2026-01-10 10:55:26] 2026-01-10 15:54:47,947 | INFO     | architecture information:
[2026-01-10 10:55:26] 2026-01-10 15:54:47,960 | INFO     | executing command: cat /etc/os-release
[2026-01-10 10:55:26] 2026-01-10 15:54:48,011 | INFO     | cat /etc/os-release:
[2026-01-10 10:55:26] NAME="CentOS Linux"
[2026-01-10 10:55:26] VERSION="7 (Core)"
[2026-01-10 10:55:26] ID="centos"
[2026-01-10 10:55:26] ID_LIKE="rhel fedora"
[2026-01-10 10:55:26] VERSION_ID="7"
[2026-01-10 10:55:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 10:55:26] ANSI_COLOR="0;31"
[2026-01-10 10:55:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 10:55:26] HOME_URL="https://www.centos.org/"
[2026-01-10 10:55:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 10:55:26] 
[2026-01-10 10:55:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 10:55:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 10:55:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 10:55:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 10:55:26] 
[2026-01-10 10:55:26] 2026-01-10 15:54:48,011 | INFO     | ***************************************
[2026-01-10 10:55:26] 2026-01-10 15:54:48,516 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 10:55:26] 2026-01-10 15:54:48,538 | INFO     | sufficient remaining disk space (75049730048 B)
[2026-01-10 10:55:26] 2026-01-10 15:54:48,538 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 10:55:26] 2026-01-10 15:54:48,538 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 10:55:26] 2026-01-10 15:54:48,538 | INFO     | update_server=False
[2026-01-10 10:55:26] 2026-01-10 15:54:48,538 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 10:55:26] 2026-01-10 15:54:48,539 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 10:55:26] 2026-01-10 15:54:48,595 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 10:55:26] 2026-01-10 15:54:49,014 | INFO     | all data control threads have been joined
[2026-01-10 10:55:26] 2026-01-10 15:54:49,335 | INFO     | all payload control threads have been joined
[2026-01-10 10:55:26] 2026-01-10 15:54:49,531 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:55:26] 2026-01-10 15:54:49,532 | INFO     | aborting loop
[2026-01-10 10:55:26] 2026-01-10 15:54:49,545 | INFO     | [job] retrieve thread has finished
[2026-01-10 10:55:26] 2026-01-10 15:54:49,634 | INFO     | all job control threads have been joined
[2026-01-10 10:55:26] 2026-01-10 15:54:49,634 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 10:55:26] 2026-01-10 15:54:49,913 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 10:55:26] 2026-01-10 15:54:49,924 | INFO     | [payload] failed_post thread has finished
[2026-01-10 10:55:26] 2026-01-10 15:54:49,940 | INFO     | [payload] validate_post thread has finished
[2026-01-10 10:55:26] 2026-01-10 15:54:50,020 | INFO     | [data] control thread has finished
[2026-01-10 10:55:26] 2026-01-10 15:54:50,341 | INFO     | [payload] control thread has finished
[2026-01-10 10:55:26] 2026-01-10 15:54:50,376 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 10:55:26] 2026-01-10 15:54:50,502 | INFO     | [data] copytool_in thread has finished
[2026-01-10 10:55:26] 2026-01-10 15:54:50,537 | INFO     | [job] job monitor thread has finished
[2026-01-10 10:55:26] 2026-01-10 15:54:50,545 | INFO     | [data] copytool_out thread has finished
[2026-01-10 10:55:26] 2026-01-10 15:54:50,639 | INFO     | [job] control thread has finished
[2026-01-10 10:55:26] 2026-01-10 15:54:50,796 | INFO     | [job] validate thread has finished
[2026-01-10 10:55:26] 2026-01-10 15:54:51,445 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:55:26] 2026-01-10 15:54:52,452 | INFO     | [job] queue monitor thread has finished
[2026-01-10 10:55:26] 2026-01-10 15:54:52,603 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 10:55:26] 2026-01-10 15:54:58,973 | INFO     | job.realtimelogging is not enabled
[2026-01-10 10:55:26] 2026-01-10 15:54:59,981 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 10:55:26] 2026-01-10 15:55:19,533 | INFO     | PID=988824 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 10:55:26] 2026-01-10 15:55:19,533 | INFO     | .. there are 8 such processes running
[2026-01-10 10:55:26] 2026-01-10 15:55:19,534 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 10:55:26] 2026-01-10 15:55:19,534 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 10:55:26] 2026-01-10 15:55:19,534 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 10:55:26] 2026-01-10 15:55:20,502 | INFO     | [monitor] cgroup control has ended
[2026-01-10 10:55:26] 2026-01-10 15:55:20,797 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140660874127168)>', '<ExcThread(monitor, started 140660592051968)>']
[2026-01-10 10:55:26] 2026-01-10 15:55:21,545 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 10:55:26] 2026-01-10 15:55:21,546 | INFO     | [monitor] control thread has ended
[2026-01-10 10:55:26] 2026-01-10 15:55:25,822 | INFO     | all workflow threads have been joined
[2026-01-10 10:55:26] 2026-01-10 15:55:25,823 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 10:55:26] 2026-01-10 15:55:25,823 | INFO     | traces error code: 0
[2026-01-10 10:55:26] 2026-01-10 15:55:25,823 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 10:55:26] 2026-01-10 15:55:25,943 [wrapper] ==== pilot stdout END ====
[2026-01-10 10:55:26] 2026-01-10 15:55:25,946 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 10:55:26] 2026-01-10 15:55:25,948 [wrapper] pilotpid: 988824
[2026-01-10 10:55:26] 2026-01-10 15:55:25,949 [wrapper] Pilot exit status: 0
[2026-01-10 10:55:26] 2026-01-10 15:55:25,964 [wrapper] pandaids: 6965390283
[2026-01-10 10:55:26] 2026-01-10 15:55:26,023 [wrapper] cleanup supervisor_pilot 1224213 988825
[2026-01-10 10:55:26] 2026-01-10 15:55:26,030 [wrapper] Test setup, not cleaning
[2026-01-10 10:55:26] 2026-01-10 15:55:26,033 [wrapper] apfmon messages muted
[2026-01-10 10:55:26] 2026-01-10 15:55:26,035 [wrapper] ==== wrapper stdout END ====
[2026-01-10 10:55:26] 2026-01-10 15:55:26,056 [wrapper] ==== wrapper stderr END ====
[2026-01-10 10:55:26]  *** Error codes and diagnostics ***
[2026-01-10 10:55:26]     "exeErrorCode": 0,
[2026-01-10 10:55:26]     "exeErrorDiag": "",
[2026-01-10 10:55:26]     "pilotErrorCode": 0,
[2026-01-10 10:55:26]     "pilotErrorDiag": "",
[2026-01-10 10:55:26]  *** Listing of results directory ***
[2026-01-10 10:55:26] total 1151688
[2026-01-10 10:55:26] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:29 queuedata.json
[2026-01-10 10:55:26] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:29 pilot3.tar.gz
[2026-01-10 10:55:26] -rwx------. 1 boincer umatlas     36322 Jan 10 08:29 runpilot2-wrapper.sh
[2026-01-10 10:55:26] -rw-r--r--. 1 boincer umatlas       100 Jan 10 09:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 10:55:26] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 09:03 run_atlas
[2026-01-10 10:55:26] -rw-r--r--. 1 boincer umatlas       105 Jan 10 09:03 job.xml
[2026-01-10 10:55:26] -rw-r--r--. 2 boincer umatlas 921926470 Jan 10 09:03 EVNT.48039248._000043.pool.root.1
[2026-01-10 10:55:26] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 09:03 start_atlas.sh
[2026-01-10 10:55:26] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 09:03 shared
[2026-01-10 10:55:26] -rw-r--r--. 2 boincer umatlas    592423 Jan 10 09:03 input.tar.gz
[2026-01-10 10:55:26] -rw-r--r--. 1 boincer umatlas         0 Jan 10 09:03 boinc_lockfile
[2026-01-10 10:55:26] -rw-r--r--. 1 boincer umatlas      2590 Jan 10 09:03 pandaJob.out
[2026-01-10 10:55:26] -rw-------. 1 boincer umatlas        57 Jan 10 09:03 setup.sh.local
[2026-01-10 10:55:26] -rw-------. 1 boincer umatlas    989556 Jan 10 09:04 agis_schedconf.cvmfs.json
[2026-01-10 10:55:26] -rw-------. 1 boincer umatlas   1516240 Jan 10 09:04 agis_ddmendpoints.agis.ALL.json
[2026-01-10 10:55:26] drwx------. 5 boincer umatlas      4096 Jan 10 09:04 pilot3
[2026-01-10 10:55:26] -rw-r--r--. 1 boincer umatlas      6841 Jan 10 10:45 init_data.xml
[2026-01-10 10:55:26] -rw-r--r--. 1 boincer umatlas       530 Jan 10 10:53 boinc_task_state.xml
[2026-01-10 10:55:26] -rw-------. 1 boincer umatlas 250839871 Jan 10 10:53 HITS.48039250._006693.pool.root.1
[2026-01-10 10:55:26] -rw-------. 1 boincer umatlas      1035 Jan 10 10:54 memory_monitor_summary.json
[2026-01-10 10:55:26] -rw-------. 1 boincer umatlas    380212 Jan 10 10:54 log.48039250._006693.job.log.tgz.1
[2026-01-10 10:55:26] -rw-------. 1 boincer umatlas      7805 Jan 10 10:54 heartbeat.json
[2026-01-10 10:55:26] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 10:54 boinc_mmap_file
[2026-01-10 10:55:26] -rw-r--r--. 1 boincer umatlas        27 Jan 10 10:54 wrapper_checkpoint.txt
[2026-01-10 10:55:26] -rw-------. 1 boincer umatlas        95 Jan 10 10:55 pilot_heartbeat.json
[2026-01-10 10:55:26] -rw-------. 1 boincer umatlas      4894 Jan 10 10:55 pilotlog.txt
[2026-01-10 10:55:26] -rw-------. 1 boincer umatlas    940316 Jan 10 10:55 log.48039250._006693.job.log.1
[2026-01-10 10:55:26] -rw-------. 1 boincer umatlas       357 Jan 10 10:55 output.list
[2026-01-10 10:55:26] -rw-r--r--. 1 boincer umatlas       620 Jan 10 10:55 runtime_log
[2026-01-10 10:55:26] -rw-------. 1 boincer umatlas   1341440 Jan 10 10:55 result.tar.gz
[2026-01-10 10:55:26] -rw-r--r--. 1 boincer umatlas      9344 Jan 10 10:55 runtime_log.err
[2026-01-10 10:55:26] -rw-------. 1 boincer umatlas       653 Jan 10 10:55 NMFMDmRDoy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyrmKDmHBTmfn.diag
[2026-01-10 10:55:26] -rw-r--r--. 1 boincer umatlas     21056 Jan 10 10:55 stderr.txt
[2026-01-10 10:55:26] HITS file was successfully produced:
[2026-01-10 10:55:26] -rw-------. 1 boincer umatlas 250839871 Jan 10 10:53 shared/HITS.pool.root.1
[2026-01-10 10:55:26]  *** Contents of shared directory: ***
[2026-01-10 10:55:26] total 1147200
[2026-01-10 10:55:26] -rw-r--r--. 2 boincer umatlas 921926470 Jan 10 09:03 ATLAS.root_0
[2026-01-10 10:55:26] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 09:03 start_atlas.sh
[2026-01-10 10:55:26] -rw-r--r--. 2 boincer umatlas    592423 Jan 10 09:03 input.tar.gz
[2026-01-10 10:55:26] -rw-------. 1 boincer umatlas 250839871 Jan 10 10:53 HITS.pool.root.1
[2026-01-10 10:55:26] -rw-------. 1 boincer umatlas   1341440 Jan 10 10:55 result.tar.gz
10:55:27 (984514): run_atlas exited; CPU time 51356.017501
10:55:27 (984514): called boinc_finish(0)

</stderr_txt>
]]>

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