Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:30:35 (4073961): wrapper (7.7.26015): starting
08:30:35 (4073961): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 08:30:35] Arguments: --nthreads 9
[2026-01-10 08:30:35] Threads: 9
[2026-01-10 08:30:35] Checking for CVMFS
[2026-01-10 08:30:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:30:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:30:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:30:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:30:35] 2.13.3.0 313591 18408 84296 154981 1 19 28100705 37030912 209 16776704 0 6318372 99.988 582569 56232 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:30:35] CVMFS is ok
[2026-01-10 08:30:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:30:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:30:35] Further information can be found at the LHC@home message board.
[2026-01-10 08:30:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:30:35] Checking for apptainer binary...
[2026-01-10 08:30:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:30:35] Running /usr/bin/apptainer --version
[2026-01-10 08:30:35] apptainer version 1.4.5-2.el9
[2026-01-10 08:30:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:30:35] c-205-37.aglt2.org
[2026-01-10 08:30:35] apptainer works
[2026-01-10 08:30:35] Set ATHENA_PROC_NUMBER=9
[2026-01-10 08:30:35] Set ATHENA_CORE_NUMBER=9
[2026-01-10 08:30:35] Starting ATLAS job with PandaID=6965391329
[2026-01-10 08:30:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 10:33:59]  *** The last 200 lines of the pilot log: ***
[2026-01-10 10:33:59] 2026-01-10 15:33:20,535 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 10:33:59] 2026-01-10 15:33:20,535 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 10:33:59] 2026-01-10 15:33:20,536 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 10:33:59] 2026-01-10 15:33:20,536 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 10:33:59] 2026-01-10 15:33:20,539 | INFO     | fitting pss+swap vs Time
[2026-01-10 10:33:59] 2026-01-10 15:33:20,539 | INFO     | sum of square deviations: 549294020.0
[2026-01-10 10:33:59] 2026-01-10 15:33:20,540 | INFO     | sum of deviations: 2981413918.000003
[2026-01-10 10:33:59] 2026-01-10 15:33:20,540 | INFO     | mean x: 1768055521.0
[2026-01-10 10:33:59] 2026-01-10 15:33:20,540 | INFO     | mean y: 2555879.7685950412
[2026-01-10 10:33:59] 2026-01-10 15:33:20,540 | INFO     | intersect: -9593953723.787886
[2026-01-10 10:33:59] 2026-01-10 15:33:20,540 | INFO     | chi2: 2.228666439603061
[2026-01-10 10:33:59] 2026-01-10 15:33:20,541 | INFO     | sum of square deviations: 483971865.0
[2026-01-10 10:33:59] 2026-01-10 15:33:20,541 | INFO     | sum of deviations: 10500598895.5
[2026-01-10 10:33:59] 2026-01-10 15:33:20,542 | INFO     | mean x: 1768055368.5
[2026-01-10 10:33:59] 2026-01-10 15:33:20,542 | INFO     | mean y: 2572835.2844827585
[2026-01-10 10:33:59] 2026-01-10 15:33:20,542 | INFO     | intersect: -38358417941.8425
[2026-01-10 10:33:59] 2026-01-10 15:33:20,542 | INFO     | chi2: 1.5579669812668269
[2026-01-10 10:33:59] 2026-01-10 15:33:20,542 | INFO     | current chi2=1.5579669812668269 (change=30.09420550415296 %)
[2026-01-10 10:33:59] 2026-01-10 15:33:20,543 | INFO     | sum of square deviations: 424045160.0
[2026-01-10 10:33:59] 2026-01-10 15:33:20,543 | INFO     | sum of deviations: 10349279337.0
[2026-01-10 10:33:59] 2026-01-10 15:33:20,543 | INFO     | mean x: 1768055216.0
[2026-01-10 10:33:59] 2026-01-10 15:33:20,543 | INFO     | mean y: 2572452.5225225226
[2026-01-10 10:33:59] 2026-01-10 15:33:20,544 | INFO     | intersect: -43148721418.214905
[2026-01-10 10:33:59] 2026-01-10 15:33:20,544 | INFO     | chi2: 1.5607199682251125
[2026-01-10 10:33:59] 2026-01-10 15:33:20,544 | INFO     | current chi2=1.5607199682251125 (change=-0.17670380639563354 %)
[2026-01-10 10:33:59] 2026-01-10 15:33:20,544 | INFO     | right removable region: 110
[2026-01-10 10:33:59] 2026-01-10 15:33:20,544 | INFO     | sum of square deviations: 483971865.0
[2026-01-10 10:33:59] 2026-01-10 15:33:20,545 | INFO     | sum of deviations: -16402248367.5
[2026-01-10 10:33:59] 2026-01-10 15:33:20,545 | INFO     | mean x: 1768055673.5
[2026-01-10 10:33:59] 2026-01-10 15:33:20,545 | INFO     | mean y: 2600333.9396551726
[2026-01-10 10:33:59] 2026-01-10 15:33:20,545 | INFO     | intersect: 59923621330.30375
[2026-01-10 10:33:59] 2026-01-10 15:33:20,546 | INFO     | chi2: 0.7268370701219389
[2026-01-10 10:33:59] 2026-01-10 15:33:20,546 | INFO     | current chi2=0.7268370701219389 (change=67.38690648335006 %)
[2026-01-10 10:33:59] 2026-01-10 15:33:20,546 | INFO     | sum of square deviations: 424045160.0
[2026-01-10 10:33:59] 2026-01-10 15:33:20,547 | INFO     | sum of deviations: -15954858721.0
[2026-01-10 10:33:59] 2026-01-10 15:33:20,547 | INFO     | mean x: 1768055826.0
[2026-01-10 10:33:59] 2026-01-10 15:33:20,547 | INFO     | mean y: 2599170.3423423423
[2026-01-10 10:33:59] 2026-01-10 15:33:20,547 | INFO     | intersect: 66526364975.54798
[2026-01-10 10:33:59] 2026-01-10 15:33:20,547 | INFO     | chi2: 0.7243129573278525
[2026-01-10 10:33:59] 2026-01-10 15:33:20,548 | INFO     | current chi2=0.7243129573278525 (change=0.3472735359608053 %)
[2026-01-10 10:33:59] 2026-01-10 15:33:20,548 | INFO     | left removable region: 20
[2026-01-10 10:33:59] 2026-01-10 15:33:20,548 | INFO     | sum of square deviations: 226022842.5
[2026-01-10 10:33:59] 2026-01-10 15:33:20,548 | INFO     | sum of deviations: -5878219921.000001
[2026-01-10 10:33:59] 2026-01-10 15:33:20,549 | INFO     | mean x: 1768055795.5
[2026-01-10 10:33:59] 2026-01-10 15:33:20,549 | INFO     | mean y: 2615911.9555555554
[2026-01-10 10:33:59] 2026-01-10 15:33:20,549 | INFO     | intersect: 45984786048.35496
[2026-01-10 10:33:59] 2026-01-10 15:33:20,549 | INFO     | chi2: 0.020339616404369293
[2026-01-10 10:33:59] 2026-01-10 15:33:20,549 | INFO     | current memory leak: -26.01 B/s (using 90 data points, chi2=0.02)
[2026-01-10 10:33:59] 2026-01-10 15:33:20,550 | INFO     | could have reported an average CPU frequency of 2701 MHz (8 samples)
[2026-01-10 10:33:59] 2026-01-10 15:33:20,550 | INFO     | ..............................
[2026-01-10 10:33:59] 2026-01-10 15:33:20,550 | INFO     | . Timing measurements:
[2026-01-10 10:33:59] 2026-01-10 15:33:20,550 | INFO     | . get job = 0 s
[2026-01-10 10:33:59] 2026-01-10 15:33:20,550 | INFO     | . initial setup = 2 s
[2026-01-10 10:33:59] 2026-01-10 15:33:20,550 | INFO     | . payload setup = 2 s
[2026-01-10 10:33:59] 2026-01-10 15:33:20,550 | INFO     | . stage-in = 0 s
[2026-01-10 10:33:59] 2026-01-10 15:33:20,551 | INFO     | . payload execution = 7335 s
[2026-01-10 10:33:59] 2026-01-10 15:33:20,551 | INFO     | . stage-out = 0 s
[2026-01-10 10:33:59] 2026-01-10 15:33:20,551 | INFO     | . log creation = 0 s
[2026-01-10 10:33:59] 2026-01-10 15:33:20,551 | INFO     | ..............................
[2026-01-10 10:33:59] 2026-01-10 15:33:20,617 | INFO     | 
[2026-01-10 10:33:59] 2026-01-10 15:33:20,617 | INFO     | job summary report
[2026-01-10 10:33:59] 2026-01-10 15:33:20,617 | INFO     | --------------------------------------------------
[2026-01-10 10:33:59] 2026-01-10 15:33:20,617 | INFO     | PanDA job id: 6965391329
[2026-01-10 10:33:59] 2026-01-10 15:33:20,617 | INFO     | task id: 47898826
[2026-01-10 10:33:59] 2026-01-10 15:33:20,617 | INFO     | errors: (none)
[2026-01-10 10:33:59] 2026-01-10 15:33:20,617 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 10:33:59] 2026-01-10 15:33:20,617 | INFO     | pilot state: finished 
[2026-01-10 10:33:59] 2026-01-10 15:33:20,617 | INFO     | transexitcode: 0
[2026-01-10 10:33:59] 2026-01-10 15:33:20,617 | INFO     | exeerrorcode: 0
[2026-01-10 10:33:59] 2026-01-10 15:33:20,617 | INFO     | exeerrordiag: 
[2026-01-10 10:33:59] 2026-01-10 15:33:20,617 | INFO     | exitcode: 0
[2026-01-10 10:33:59] 2026-01-10 15:33:20,617 | INFO     | exitmsg: OK
[2026-01-10 10:33:59] 2026-01-10 15:33:20,617 | INFO     | cpuconsumptiontime: 62736 s
[2026-01-10 10:33:59] 2026-01-10 15:33:20,618 | INFO     | nevents: 400
[2026-01-10 10:33:59] 2026-01-10 15:33:20,618 | INFO     | neventsw: 0
[2026-01-10 10:33:59] 2026-01-10 15:33:20,618 | INFO     | pid: 4104885
[2026-01-10 10:33:59] 2026-01-10 15:33:20,618 | INFO     | pgrp: 4104885
[2026-01-10 10:33:59] 2026-01-10 15:33:20,618 | INFO     | corecount: 9
[2026-01-10 10:33:59] 2026-01-10 15:33:20,618 | INFO     | event service: False
[2026-01-10 10:33:59] 2026-01-10 15:33:20,618 | INFO     | sizes: {0: 2283918, 3: 2284180, 11: 2284208, 7341: 2311691, 7342: 2320689, 7343: 2320745, 7345: 2321067}
[2026-01-10 10:33:59] 2026-01-10 15:33:20,618 | INFO     | --------------------------------------------------
[2026-01-10 10:33:59] 2026-01-10 15:33:20,618 | INFO     | 
[2026-01-10 10:33:59] 2026-01-10 15:33:20,618 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 10:33:59] 2026-01-10 15:33:20,629 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 10:33:59] 2026-01-10 15:33:20,629 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 10:33:59] 2026-01-10 15:33:20,629 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 10:33:59] 2026-01-10 15:33:20,629 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 10:33:59] 2026-01-10 15:33:20,629 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 10:33:59] 2026-01-10 15:33:20,630 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 10:33:59] 2026-01-10 15:33:20,630 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 10:33:59] 2026-01-10 15:33:20,630 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 10:33:59] 2026-01-10 15:33:20,630 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 10:33:59] 2026-01-10 15:33:20,630 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 10:33:59] 2026-01-10 15:33:20,630 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 10:33:59] 2026-01-10 15:33:20,630 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 10:33:59] 2026-01-10 15:33:20,630 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 10:33:59] 2026-01-10 15:33:20,630 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 10:33:59] 2026-01-10 15:33:20,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 10:33:59] 2026-01-10 15:33:20,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 10:33:59] 2026-01-10 15:33:20,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 10:33:59] 2026-01-10 15:33:20,630 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 10:33:59] 2026-01-10 15:33:20,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 10:33:59] 2026-01-10 15:33:20,630 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 10:33:59] 2026-01-10 15:33:20,631 | INFO     | job 6965391329 has completed (purged errors)
[2026-01-10 10:33:59] 2026-01-10 15:33:20,631 | INFO     | overall cleanup function is called
[2026-01-10 10:33:59] 2026-01-10 15:33:21,638 | INFO     | --- collectZombieJob: --- 10, [4104885]
[2026-01-10 10:33:59] 2026-01-10 15:33:21,638 | INFO     | zombie collector waiting for pid 4104885
[2026-01-10 10:33:59] 2026-01-10 15:33:21,638 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 10:33:59] 2026-01-10 15:33:21,638 | INFO     | collected zombie processes
[2026-01-10 10:33:59] 2026-01-10 15:33:21,638 | INFO     | will attempt to kill all subprocesses of pid=4104885
[2026-01-10 10:33:59] 2026-01-10 15:33:21,714 | WARNING  | process 4104885 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 10:33:59] 2026-01-10 15:33:21,883 | INFO     | process IDs to be killed: [4104885] (in reverse order)
[2026-01-10 10:33:59] 2026-01-10 15:33:21,901 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 10:33:59] 2026-01-10 15:33:21,915 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 10:33:59] 2026-01-10 15:33:21,915 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 10:33:59] 2026-01-10 15:33:21,930 | INFO     | did not find any defunct processes belonging to 4104885
[2026-01-10 10:33:59] 2026-01-10 15:33:21,944 | INFO     | did not find any defunct processes belonging to 4104885
[2026-01-10 10:33:59] 2026-01-10 15:33:21,944 | INFO     | ready for new job
[2026-01-10 10:33:59] 2026-01-10 15:33:21,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 10:33:59] 2026-01-10 15:33:21,946 | INFO     | ***************************************
[2026-01-10 10:33:59] 2026-01-10 15:33:21,946 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 10:33:59] 2026-01-10 15:33:21,946 | INFO     | ***************************************
[2026-01-10 10:33:59] 2026-01-10 15:33:21,947 | INFO     | 
[2026-01-10 10:33:59] 2026-01-10 15:33:21,949 | INFO     | architecture information:
[2026-01-10 10:33:59] 2026-01-10 15:33:21,950 | INFO     | executing command: cat /etc/os-release
[2026-01-10 10:33:59] 2026-01-10 15:33:21,959 | INFO     | cat /etc/os-release:
[2026-01-10 10:33:59] NAME="CentOS Linux"
[2026-01-10 10:33:59] VERSION="7 (Core)"
[2026-01-10 10:33:59] ID="centos"
[2026-01-10 10:33:59] ID_LIKE="rhel fedora"
[2026-01-10 10:33:59] VERSION_ID="7"
[2026-01-10 10:33:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 10:33:59] ANSI_COLOR="0;31"
[2026-01-10 10:33:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 10:33:59] HOME_URL="https://www.centos.org/"
[2026-01-10 10:33:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 10:33:59] 
[2026-01-10 10:33:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 10:33:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 10:33:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 10:33:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 10:33:59] 
[2026-01-10 10:33:59] 2026-01-10 15:33:21,959 | INFO     | ***************************************
[2026-01-10 10:33:59] 2026-01-10 15:33:22,032 | INFO     | number of running child processes to parent process 4104885: 1
[2026-01-10 10:33:59] 2026-01-10 15:33:22,032 | INFO     | maximum number of monitored processes: 6
[2026-01-10 10:33:59] 2026-01-10 15:33:22,032 | INFO     | aborting job monitoring since job object (job id=6965391329) has expired
[2026-01-10 10:33:59] 2026-01-10 15:33:22,462 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 10:33:59] 2026-01-10 15:33:22,471 | INFO     | sufficient remaining disk space (42016440320 B)
[2026-01-10 10:33:59] 2026-01-10 15:33:22,472 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 10:33:59] 2026-01-10 15:33:22,472 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 10:33:59] 2026-01-10 15:33:22,472 | INFO     | update_server=False
[2026-01-10 10:33:59] 2026-01-10 15:33:22,472 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 10:33:59] 2026-01-10 15:33:22,472 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:33:59] 2026-01-10 15:33:22,473 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:33:59] 2026-01-10 15:33:22,473 | INFO     | will abort loop
[2026-01-10 10:33:59] 2026-01-10 15:33:22,537 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 10:33:59] 2026-01-10 15:33:22,541 | INFO     | all data control threads have been joined
[2026-01-10 10:33:59] 2026-01-10 15:33:23,254 | INFO     | all job control threads have been joined
[2026-01-10 10:33:59] 2026-01-10 15:33:23,447 | INFO     | all payload control threads have been joined
[2026-01-10 10:33:59] 2026-01-10 15:33:23,477 | INFO     | [job] retrieve thread has finished
[2026-01-10 10:33:59] 2026-01-10 15:33:23,478 | INFO     | [job] queue monitor thread has finished
[2026-01-10 10:33:59] 2026-01-10 15:33:23,478 | INFO     | [job] job monitor thread has finished
[2026-01-10 10:33:59] 2026-01-10 15:33:23,542 | INFO     | [data] control thread has finished
[2026-01-10 10:33:59] 2026-01-10 15:33:23,763 | INFO     | [data] copytool_in thread has finished
[2026-01-10 10:33:59] 2026-01-10 15:33:23,880 | INFO     | [payload] validate_post thread has finished
[2026-01-10 10:33:59] 2026-01-10 15:33:23,899 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 10:33:59] 2026-01-10 15:33:24,259 | INFO     | [job] control thread has finished
[2026-01-10 10:33:59] 2026-01-10 15:33:24,260 | INFO     | [payload] failed_post thread has finished
[2026-01-10 10:33:59] 2026-01-10 15:33:24,271 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 10:33:59] 2026-01-10 15:33:24,279 | INFO     | [job] validate thread has finished
[2026-01-10 10:33:59] 2026-01-10 15:33:24,399 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 10:33:59] 2026-01-10 15:33:24,452 | INFO     | [payload] control thread has finished
[2026-01-10 10:33:59] 2026-01-10 15:33:24,541 | INFO     | [data] copytool_out thread has finished
[2026-01-10 10:33:59] 2026-01-10 15:33:24,939 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 10:33:59] 2026-01-10 15:33:27,904 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 10:33:59] 2026-01-10 15:33:33,199 | INFO     | job.realtimelogging is not enabled
[2026-01-10 10:33:59] 2026-01-10 15:33:34,204 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 10:33:59] 2026-01-10 15:33:53,026 | INFO     | PID=4081347 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 10:33:59] 2026-01-10 15:33:53,027 | INFO     | .. there are 2 such processes running
[2026-01-10 10:33:59] 2026-01-10 15:33:53,027 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 10:33:59] 2026-01-10 15:33:53,027 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 10:33:59] 2026-01-10 15:33:53,027 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 10:33:59] 2026-01-10 15:33:53,417 | INFO     | [monitor] cgroup control has ended
[2026-01-10 10:33:59] 2026-01-10 15:33:54,025 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139811690710848)>', '<ExcThread(monitor, started 139810983376640)>']
[2026-01-10 10:33:59] 2026-01-10 15:33:54,032 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 10:33:59] 2026-01-10 15:33:54,032 | INFO     | [monitor] control thread has ended
[2026-01-10 10:33:59] 2026-01-10 15:33:59,050 | INFO     | all workflow threads have been joined
[2026-01-10 10:33:59] 2026-01-10 15:33:59,050 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 10:33:59] 2026-01-10 15:33:59,050 | INFO     | traces error code: 0
[2026-01-10 10:33:59] 2026-01-10 15:33:59,050 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 10:33:59] 2026-01-10 15:33:59,115 [wrapper] ==== pilot stdout END ====
[2026-01-10 10:33:59] 2026-01-10 15:33:59,117 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 10:33:59] 2026-01-10 15:33:59,119 [wrapper] pilotpid: 4081347
[2026-01-10 10:33:59] 2026-01-10 15:33:59,120 [wrapper] Pilot exit status: 0
[2026-01-10 10:33:59] 2026-01-10 15:33:59,126 [wrapper] pandaids: 6965391329
[2026-01-10 10:33:59] 2026-01-10 15:33:59,147 [wrapper] cleanup supervisor_pilot   18887 4081348
[2026-01-10 10:33:59] 2026-01-10 15:33:59,148 [wrapper] Test setup, not cleaning
[2026-01-10 10:33:59] 2026-01-10 15:33:59,150 [wrapper] apfmon messages muted
[2026-01-10 10:33:59] 2026-01-10 15:33:59,152 [wrapper] ==== wrapper stdout END ====
[2026-01-10 10:33:59] 2026-01-10 15:33:59,153 [wrapper] ==== wrapper stderr END ====
[2026-01-10 10:33:59]  *** Error codes and diagnostics ***
[2026-01-10 10:33:59]     "exeErrorCode": 0,
[2026-01-10 10:33:59]     "exeErrorDiag": "",
[2026-01-10 10:33:59]     "pilotErrorCode": 0,
[2026-01-10 10:33:59]     "pilotErrorDiag": "",
[2026-01-10 10:33:59]  *** Listing of results directory ***
[2026-01-10 10:33:59] total 441956
[2026-01-10 10:33:59] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 10:33:59] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:26 queuedata.json
[2026-01-10 10:33:59] -rwx------. 1 boincer umatlas     36322 Jan 10 08:27 runpilot2-wrapper.sh
[2026-01-10 10:33:59] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 10:33:59] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:30 run_atlas
[2026-01-10 10:33:59] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:30 job.xml
[2026-01-10 10:33:59] -rw-r--r--. 2 boincer umatlas 223988559 Jan 10 08:30 EVNT.47898824._001511.pool.root.1
[2026-01-10 10:33:59] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:30 start_atlas.sh
[2026-01-10 10:33:59] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:30 shared
[2026-01-10 10:33:59] -rw-r--r--. 2 boincer umatlas    592406 Jan 10 08:30 input.tar.gz
[2026-01-10 10:33:59] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:30 boinc_lockfile
[2026-01-10 10:33:59] -rw-r--r--. 1 boincer umatlas      2517 Jan 10 08:30 pandaJob.out
[2026-01-10 10:33:59] -rw-------. 1 boincer umatlas    989556 Jan 10 08:30 agis_schedconf.cvmfs.json
[2026-01-10 10:33:59] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:30 agis_ddmendpoints.agis.ALL.json
[2026-01-10 10:33:59] drwx------. 5 boincer umatlas      4096 Jan 10 08:30 pilot3
[2026-01-10 10:33:59] -rw-r--r--. 1 boincer umatlas      6529 Jan 10 10:31 init_data.xml
[2026-01-10 10:33:59] -rw-------. 1 boincer umatlas 221750329 Jan 10 10:32 HITS.47898826._040604.pool.root.1
[2026-01-10 10:33:59] -rw-r--r--. 1 boincer umatlas       529 Jan 10 10:32 boinc_task_state.xml
[2026-01-10 10:33:59] -rw-------. 1 boincer umatlas      1030 Jan 10 10:33 memory_monitor_summary.json
[2026-01-10 10:33:59] -rw-------. 1 boincer umatlas        95 Jan 10 10:33 pilot_heartbeat.json
[2026-01-10 10:33:59] -rw-------. 1 boincer umatlas    379702 Jan 10 10:33 log.47898826._040604.job.log.tgz.1
[2026-01-10 10:33:59] -rw-------. 1 boincer umatlas      7812 Jan 10 10:33 heartbeat.json
[2026-01-10 10:33:59] -rw-r--r--. 1 boincer umatlas        27 Jan 10 10:33 wrapper_checkpoint.txt
[2026-01-10 10:33:59] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 10:33 boinc_mmap_file
[2026-01-10 10:33:59] -rw-------. 1 boincer umatlas      5185 Jan 10 10:33 pilotlog.txt
[2026-01-10 10:33:59] -rw-------. 1 boincer umatlas   1074189 Jan 10 10:33 log.47898826._040604.job.log.1
[2026-01-10 10:33:59] -rw-------. 1 boincer umatlas       357 Jan 10 10:33 output.list
[2026-01-10 10:33:59] -rw-r--r--. 1 boincer umatlas       620 Jan 10 10:33 runtime_log
[2026-01-10 10:33:59] -rw-------. 1 boincer umatlas   1474560 Jan 10 10:33 result.tar.gz
[2026-01-10 10:33:59] -rw-r--r--. 1 boincer umatlas      8817 Jan 10 10:33 runtime_log.err
[2026-01-10 10:33:59] -rw-------. 1 boincer umatlas       652 Jan 10 10:33 pkCNDmEBoy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXrmKDmnkpLtm.diag
[2026-01-10 10:33:59] -rw-r--r--. 1 boincer umatlas     21062 Jan 10 10:33 stderr.txt
[2026-01-10 10:33:59] HITS file was successfully produced:
[2026-01-10 10:33:59] -rw-------. 1 boincer umatlas 221750329 Jan 10 10:32 shared/HITS.pool.root.1
[2026-01-10 10:33:59]  *** Contents of shared directory: ***
[2026-01-10 10:33:59] total 437340
[2026-01-10 10:33:59] -rw-r--r--. 2 boincer umatlas 223988559 Jan 10 08:30 ATLAS.root_0
[2026-01-10 10:33:59] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:30 start_atlas.sh
[2026-01-10 10:33:59] -rw-r--r--. 2 boincer umatlas    592406 Jan 10 08:30 input.tar.gz
[2026-01-10 10:33:59] -rw-------. 1 boincer umatlas 221750329 Jan 10 10:32 HITS.pool.root.1
[2026-01-10 10:33:59] -rw-------. 1 boincer umatlas   1474560 Jan 10 10:33 result.tar.gz
10:34:01 (4073961): run_atlas exited; CPU time 62876.794027
10:34:01 (4073961): called boinc_finish(0)

</stderr_txt>
]]>

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