Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:42:22 (3267475): wrapper (7.7.26015): starting
17:42:22 (3267475): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 17:42:22] Arguments: --nthreads 3
[2026-01-10 17:42:22] Threads: 3
[2026-01-10 17:42:22] Checking for CVMFS
[2026-01-10 17:42:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 17:42:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 17:42:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 17:42:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 17:42:23] 2.9.2.0 2438121 3361 87068 154986 1 57 20712631 36864001 0 130560 0 2186064 99.988 127695 3097 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 17:42:23] CVMFS is ok
[2026-01-10 17:42:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 17:42:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 17:42:23] Further information can be found at the LHC@home message board.
[2026-01-10 17:42:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 17:42:23] Checking for apptainer binary...
[2026-01-10 17:42:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 17:42:23] Running /usr/bin/apptainer --version
[2026-01-10 17:42:23] apptainer version 1.4.1-1.1
[2026-01-10 17:42:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 17:42:23] magicA252
[2026-01-10 17:42:23] apptainer works
[2026-01-10 17:42:23] Set ATHENA_PROC_NUMBER=3
[2026-01-10 17:42:23] Set ATHENA_CORE_NUMBER=3
[2026-01-10 17:42:23] Starting ATLAS job with PandaID=6965390302
[2026-01-10 17:42:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:33:45]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:33:45] 2026-01-10 18:33:14,727 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:33:45] 2026-01-10 18:33:14,727 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:33:45] 2026-01-10 18:33:14,727 | INFO     | update_server=False
[2026-01-10 19:33:45] 2026-01-10 18:33:14,727 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:33:45] 2026-01-10 18:33:14,727 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:33:45] 2026-01-10 18:33:14,727 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:33:45] 2026-01-10 18:33:14,993 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 19:33:45] 2026-01-10 18:33:14,993 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 19:33:45] 2026-01-10 18:33:14,993 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:33:45] 2026-01-10 18:33:14,993 | INFO     | will abort loop
[2026-01-10 19:33:45] 2026-01-10 18:33:15,346 | INFO     | all payload control threads have been joined
[2026-01-10 19:33:45] 2026-01-10 18:33:15,355 | INFO     | all data control threads have been joined
[2026-01-10 19:33:45] 2026-01-10 18:33:15,469 | INFO     | all job control threads have been joined
[2026-01-10 19:33:45] 2026-01-10 18:33:15,733 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:33:45] 2026-01-10 18:33:15,733 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:33:45] 2026-01-10 18:33:15,746 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:33:45] 2026-01-10 18:33:15,996 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:33:45] 2026-01-10 18:33:15,999 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:33:45] 2026-01-10 18:33:16,152 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:33:45] 2026-01-10 18:33:16,352 | INFO     | [payload] control thread has finished
[2026-01-10 19:33:45] 2026-01-10 18:33:16,352 | INFO     | [job] validate thread has finished
[2026-01-10 19:33:45] 2026-01-10 18:33:16,361 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:33:45] 2026-01-10 18:33:16,361 | INFO     | [data] control thread has finished
[2026-01-10 19:33:45] 2026-01-10 18:33:16,474 | INFO     | [job] control thread has finished
[2026-01-10 19:33:45] 2026-01-10 18:33:16,489 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:33:45] 2026-01-10 18:33:16,491 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:33:45] 2026-01-10 18:33:16,965 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:33:45] 2026-01-10 18:33:17,747 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:33:45] 2026-01-10 18:33:18,734 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:33:45] 2026-01-10 18:33:25,017 | INFO     | job.realtimelogging is not enabled
[2026-01-10 19:33:45] 2026-01-10 18:33:26,023 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:33:45] 2026-01-10 18:33:36,283 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:33:45] 2026-01-10 18:33:37,448 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140328173246272)>', '<ExcThread(monitor, started 140327235081984)>']
[2026-01-10 19:33:45] 2026-01-10 18:33:42,474 | INFO     | all workflow threads have been joined
[2026-01-10 19:33:45] 2026-01-10 18:33:42,474 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:33:45] 2026-01-10 18:33:42,474 | INFO     | traces error code: 0
[2026-01-10 19:33:45] 2026-01-10 18:33:42,474 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:33:45] 2026-01-10 18:33:45,506 | INFO     | PID=3271202 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:33:45] 2026-01-10 18:33:45,506 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:33:45] 2026-01-10 18:33:45,506 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:33:45] 2026-01-10 18:33:45,506 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:33:45] 2026-01-10 18:33:45,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:33:45] 2026-01-10 18:33:45,506 | INFO     | [monitor] control thread has ended
[2026-01-10 19:33:45] 2026-01-10 18:33:45,552 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:33:45] 2026-01-10 18:33:45,555 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:33:45] 2026-01-10 18:33:45,557 [wrapper] pilotpid: 3271202
[2026-01-10 19:33:45] 2026-01-10 18:33:45,560 [wrapper] Pilot exit status: 0
[2026-01-10 19:33:45] 2026-01-10 18:33:45,568 [wrapper] pandaids: 6965390302
[2026-01-10 19:33:45] 2026-01-10 18:33:45,585 [wrapper] cleanup supervisor_pilot 3291993 3271203
[2026-01-10 19:33:45] 2026-01-10 18:33:45,587 [wrapper] Test setup, not cleaning
[2026-01-10 19:33:45] 2026-01-10 18:33:45,590 [wrapper] apfmon messages muted
[2026-01-10 19:33:45] 2026-01-10 18:33:45,592 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:33:45] 2026-01-10 18:33:45,595 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:33:45]  *** Error codes and diagnostics ***
[2026-01-10 19:33:45]     "exeErrorCode": 0,
[2026-01-10 19:33:45]     "exeErrorDiag": "",
[2026-01-10 19:33:45]     "pilotErrorCode": 0,
[2026-01-10 19:33:45]     "pilotErrorDiag": "",
[2026-01-10 19:33:45]  *** Listing of results directory ***
[2026-01-10 19:33:45] total 1165156
[2026-01-10 19:33:45] -rw-r--r-- 1 boinc boinc    579449 Jan 10 14:14 pilot3.tar.gz
[2026-01-10 19:33:45] -rwx------ 1 boinc boinc     36322 Jan 10 14:26 runpilot2-wrapper.sh
[2026-01-10 19:33:45] -rw-r--r-- 1 boinc boinc      5112 Jan 10 14:26 queuedata.json
[2026-01-10 19:33:45] -rw-r--r-- 1 boinc boinc       100 Jan 10 17:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:33:45] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 17:42 run_atlas
[2026-01-10 19:33:45] -rw-r--r-- 1 boinc boinc       105 Jan 10 17:42 job.xml
[2026-01-10 19:33:45] -rw-r--r-- 2 boinc boinc 929971209 Jan 10 17:42 EVNT.48039248._000044.pool.root.1
[2026-01-10 19:33:45] -rw-r--r-- 2 boinc boinc    592421 Jan 10 17:42 input.tar.gz
[2026-01-10 19:33:45] -rw-r--r-- 2 boinc boinc     15847 Jan 10 17:42 start_atlas.sh
[2026-01-10 19:33:45] drwxrwx--x 2 boinc boinc      4096 Jan 10 17:42 shared
[2026-01-10 19:33:45] -rw-r--r-- 1 boinc boinc         0 Jan 10 17:42 boinc_setup_complete
[2026-01-10 19:33:45] -rw-r--r-- 1 boinc boinc      6448 Jan 10 17:42 init_data.xml
[2026-01-10 19:33:45] -rw-r--r-- 1 boinc boinc         0 Jan 10 17:42 boinc_lockfile
[2026-01-10 19:33:45] -rw-r--r-- 1 boinc boinc      2591 Jan 10 17:42 pandaJob.out
[2026-01-10 19:33:45] -rw------- 1 boinc boinc    989556 Jan 10 17:42 agis_schedconf.cvmfs.json
[2026-01-10 19:33:45] -rw------- 1 boinc boinc   1516240 Jan 10 17:42 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:33:45] drwx------ 5 boinc boinc      4096 Jan 10 17:42 pilot3
[2026-01-10 19:33:45] -rw------- 1 boinc boinc 256689357 Jan 10 19:32 HITS.48039250._006712.pool.root.1
[2026-01-10 19:33:45] -rw-r--r-- 1 boinc boinc       531 Jan 10 19:32 boinc_task_state.xml
[2026-01-10 19:33:45] -rw------- 1 boinc boinc        95 Jan 10 19:33 pilot_heartbeat.json
[2026-01-10 19:33:45] -rw------- 1 boinc boinc      1016 Jan 10 19:33 memory_monitor_summary.json
[2026-01-10 19:33:45] -rw------- 1 boinc boinc    322797 Jan 10 19:33 log.48039250._006712.job.log.tgz.1
[2026-01-10 19:33:45] -rw------- 1 boinc boinc      7769 Jan 10 19:33 heartbeat.json
[2026-01-10 19:33:45] -rw-r--r-- 1 boinc boinc      8192 Jan 10 19:33 boinc_mmap_file
[2026-01-10 19:33:45] -rw-r--r-- 1 boinc boinc        27 Jan 10 19:33 wrapper_checkpoint.txt
[2026-01-10 19:33:45] -rw------- 1 boinc boinc       747 Jan 10 19:33 pilotlog.txt
[2026-01-10 19:33:45] -rw------- 1 boinc boinc    961398 Jan 10 19:33 log.48039250._006712.job.log.1
[2026-01-10 19:33:45] -rw------- 1 boinc boinc       357 Jan 10 19:33 output.list
[2026-01-10 19:33:45] -rw-r--r-- 1 boinc boinc       620 Jan 10 19:33 runtime_log
[2026-01-10 19:33:45] -rw------- 1 boinc boinc   1300480 Jan 10 19:33 result.tar.gz
[2026-01-10 19:33:45] -rw-r--r-- 1 boinc boinc      8912 Jan 10 19:33 runtime_log.err
[2026-01-10 19:33:45] -rw------- 1 boinc boinc       662 Jan 10 19:33 QZfKDmLAoy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUrmKDmgvMtHo.diag
[2026-01-10 19:33:45] -rw-r--r-- 1 boinc boinc      7971 Jan 10 19:33 stderr.txt
[2026-01-10 19:33:45] HITS file was successfully produced:
[2026-01-10 19:33:45] -rw------- 1 boinc boinc 256689357 Jan 10 19:32 shared/HITS.pool.root.1
[2026-01-10 19:33:45]  *** Contents of shared directory: ***
[2026-01-10 19:33:45] total 1160728
[2026-01-10 19:33:45] -rw-r--r-- 2 boinc boinc 929971209 Jan 10 17:42 ATLAS.root_0
[2026-01-10 19:33:45] -rw-r--r-- 2 boinc boinc    592421 Jan 10 17:42 input.tar.gz
[2026-01-10 19:33:45] -rw-r--r-- 2 boinc boinc     15847 Jan 10 17:42 start_atlas.sh
[2026-01-10 19:33:45] -rw------- 1 boinc boinc 256689357 Jan 10 19:32 HITS.pool.root.1
[2026-01-10 19:33:45] -rw------- 1 boinc boinc   1300480 Jan 10 19:33 result.tar.gz
19:33:47 (3267475): run_atlas exited; CPU time 19185.298951
19:33:47 (3267475): called boinc_finish(0)

</stderr_txt>
]]>

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