Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:13:05 (2067602): wrapper (7.7.26015): starting
20:13:05 (2067602): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 20:13:05] Arguments: --nthreads 4
[2026-01-10 20:13:05] Threads: 4
[2026-01-10 20:13:05] Checking for CVMFS
[2026-01-10 20:13:05] No cvmfs_config command found, will try listing directly
[2026-01-10 20:13:05] CVMFS is ok
[2026-01-10 20:13:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 20:13:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 20:13:05] Further information can be found at the LHC@home message board.
[2026-01-10 20:13:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 20:13:05] Checking for apptainer binary...
[2026-01-10 20:13:05] which: no apptainer in ((null))
[2026-01-10 20:13:05] apptainer is not installed, using version from CVMFS
[2026-01-10 20:13:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 20:13:06] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2026-01-10 20:13:06] apptainer works
[2026-01-10 20:13:06] Set ATHENA_PROC_NUMBER=4
[2026-01-10 20:13:06] Set ATHENA_CORE_NUMBER=4
[2026-01-10 20:13:06] Starting ATLAS job with PandaID=6965383266
[2026-01-10 20:13:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 00:35:48]  *** The last 200 lines of the pilot log: ***
[2026-01-11 00:35:48] 2026-01-10 23:31:50,475 | INFO     | monitor loop #1117: job 0:6965383266 is in state 'finished'
[2026-01-11 00:35:48] 2026-01-10 23:31:50,476 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 00:35:48] 2026-01-10 23:31:51,720 | INFO     | time since job start (15514s) is within the limit (349056.0s)
[2026-01-11 00:35:48] 2026-01-10 23:31:52,979 | INFO     | monitor loop #1118: job 0:6965383266 is in state 'finished'
[2026-01-11 00:35:48] 2026-01-10 23:31:52,979 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 00:35:48] 2026-01-10 23:31:53,725 | INFO     | time since job start (15516s) is within the limit (349056.0s)
[2026-01-11 00:35:48] 2026-01-10 23:31:55,482 | INFO     | monitor loop #1119: job 0:6965383266 is in state 'finished'
[2026-01-11 00:35:48] 2026-01-10 23:31:55,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 00:35:48] 2026-01-10 23:31:55,730 | INFO     | time since job start (15518s) is within the limit (349056.0s)
[2026-01-11 00:35:48] 2026-01-10 23:31:56,344 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 00:35:48] 2026-01-10 23:31:56,356 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2612.114453125
[2026-01-11 00:35:48] 2026-01-10 23:31:56,369 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6965383266/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 00:35:48] 2026-01-10 23:31:56,370 | INFO     | extracted standard info from prmon json
[2026-01-11 00:35:48] 2026-01-10 23:31:56,370 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 00:35:48] 2026-01-10 23:31:56,371 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 00:35:48] 2026-01-10 23:31:56,371 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 00:35:48] 2026-01-10 23:31:56,371 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 00:35:48] 2026-01-10 23:31:56,377 | INFO     | fitting pss+swap vs Time
[2026-01-11 00:35:48] 2026-01-10 23:31:56,377 | INFO     | sum of square deviations: 5081276667.5
[2026-01-11 00:35:48] 2026-01-10 23:31:56,379 | INFO     | sum of deviations: 4032751632.499998
[2026-01-11 00:35:48] 2026-01-10 23:31:56,379 | INFO     | mean x: 1768080141.5
[2026-01-11 00:35:48] 2026-01-10 23:31:56,380 | INFO     | mean y: 2344343.4133858266
[2026-01-11 00:35:48] 2026-01-10 23:31:56,380 | INFO     | intersect: -1400891210.0903444
[2026-01-11 00:35:48] 2026-01-10 23:31:56,380 | INFO     | chi2: 1.4370267421663347
[2026-01-11 00:35:48] 2026-01-10 23:31:56,381 | INFO     | sum of square deviations: 4787066500.0
[2026-01-11 00:35:48] 2026-01-10 23:31:56,383 | INFO     | sum of deviations: 4151400993.9999957
[2026-01-11 00:35:48] 2026-01-10 23:31:56,383 | INFO     | mean x: 1768079989.0
[2026-01-11 00:35:48] 2026-01-10 23:31:56,383 | INFO     | mean y: 2344404.923694779
[2026-01-11 00:35:48] 2026-01-10 23:31:56,383 | INFO     | intersect: -1530955586.5859492
[2026-01-11 00:35:48] 2026-01-10 23:31:56,383 | INFO     | chi2: 1.4373870985212558
[2026-01-11 00:35:48] 2026-01-10 23:31:56,384 | INFO     | current chi2=1.4373870985212558 (change=-0.025076523932867224 %)
[2026-01-11 00:35:48] 2026-01-10 23:31:56,384 | INFO     | right removable region: 248
[2026-01-11 00:35:48] 2026-01-10 23:31:56,384 | INFO     | sum of square deviations: 4787066500.0
[2026-01-11 00:35:48] 2026-01-10 23:31:56,386 | INFO     | sum of deviations: -30780942881.000004
[2026-01-11 00:35:48] 2026-01-10 23:31:56,386 | INFO     | mean x: 1768080294.0
[2026-01-11 00:35:48] 2026-01-10 23:31:56,386 | INFO     | mean y: 2362222.9919678713
[2026-01-11 00:35:48] 2026-01-10 23:31:56,386 | INFO     | intersect: 11371157400.29642
[2026-01-11 00:35:48] 2026-01-10 23:31:56,387 | INFO     | chi2: 0.06438330866694125
[2026-01-11 00:35:48] 2026-01-10 23:31:56,387 | INFO     | current chi2=0.06438330866694125 (change=95.5196861145477 %)
[2026-01-11 00:35:48] 2026-01-10 23:31:56,387 | INFO     | sum of square deviations: 4504437945.0
[2026-01-11 00:35:48] 2026-01-10 23:31:56,389 | INFO     | sum of deviations: -30991910649.0
[2026-01-11 00:35:48] 2026-01-10 23:31:56,389 | INFO     | mean x: 1768080446.5
[2026-01-11 00:35:48] 2026-01-10 23:31:56,389 | INFO     | mean y: 2362325.5081967213
[2026-01-11 00:35:48] 2026-01-10 23:31:56,390 | INFO     | intersect: 12167296527.56479
[2026-01-11 00:35:48] 2026-01-10 23:31:56,390 | INFO     | chi2: 0.0584808140337356
[2026-01-11 00:35:48] 2026-01-10 23:31:56,390 | INFO     | current chi2=0.0584808140337356 (change=9.167740452326886 %)
[2026-01-11 00:35:48] 2026-01-10 23:31:56,390 | INFO     | left removable region: 20
[2026-01-11 00:35:48] 2026-01-10 23:31:56,391 | INFO     | sum of square deviations: 3675146117.0
[2026-01-11 00:35:48] 2026-01-10 23:31:56,392 | INFO     | sum of deviations: -26347738112.99998
[2026-01-11 00:35:48] 2026-01-10 23:31:56,392 | INFO     | mean x: 1768080568.5
[2026-01-11 00:35:48] 2026-01-10 23:31:56,392 | INFO     | mean y: 2360608.754385965
[2026-01-11 00:35:48] 2026-01-10 23:31:56,393 | INFO     | intersect: 12678026364.201715
[2026-01-11 00:35:48] 2026-01-10 23:31:56,393 | INFO     | chi2: 0.05730833753491368
[2026-01-11 00:35:48] 2026-01-10 23:31:56,393 | INFO     | current memory leak: -7.17 B/s (using 228 data points, chi2=0.06)
[2026-01-11 00:35:48] 2026-01-10 23:31:56,394 | INFO     | could have reported an average CPU frequency of 2603 MHz (12 samples)
[2026-01-11 00:35:48] 2026-01-10 23:31:56,394 | INFO     | ..............................
[2026-01-11 00:35:48] 2026-01-10 23:31:56,394 | INFO     | . Timing measurements:
[2026-01-11 00:35:48] 2026-01-10 23:31:56,394 | INFO     | . get job = 0 s
[2026-01-11 00:35:48] 2026-01-10 23:31:56,394 | INFO     | . initial setup = 1 s
[2026-01-11 00:35:48] 2026-01-10 23:31:56,394 | INFO     | . payload setup = 6 s
[2026-01-11 00:35:48] 2026-01-10 23:31:56,394 | INFO     | . stage-in = 0 s
[2026-01-11 00:35:48] 2026-01-10 23:31:56,395 | INFO     | . payload execution = 15481 s
[2026-01-11 00:35:48] 2026-01-10 23:31:56,395 | INFO     | . stage-out = 1 s
[2026-01-11 00:35:48] 2026-01-10 23:31:56,395 | INFO     | . log creation = 0 s
[2026-01-11 00:35:48] 2026-01-10 23:31:56,395 | INFO     | ..............................
[2026-01-11 00:35:48] 2026-01-10 23:31:56,527 | INFO     | 
[2026-01-11 00:35:48] 2026-01-10 23:31:56,528 | INFO     | job summary report
[2026-01-11 00:35:48] 2026-01-10 23:31:56,528 | INFO     | --------------------------------------------------
[2026-01-11 00:35:48] 2026-01-10 23:31:56,528 | INFO     | PanDA job id: 6965383266
[2026-01-11 00:35:48] 2026-01-10 23:31:56,528 | INFO     | task id: 47898826
[2026-01-11 00:35:48] 2026-01-10 23:31:56,528 | INFO     | errors: (none)
[2026-01-11 00:35:48] 2026-01-10 23:31:56,528 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 00:35:48] 2026-01-10 23:31:56,528 | INFO     | pilot state: finished 
[2026-01-11 00:35:48] 2026-01-10 23:31:56,528 | INFO     | transexitcode: 0
[2026-01-11 00:35:48] 2026-01-10 23:31:56,528 | INFO     | exeerrorcode: 0
[2026-01-11 00:35:48] 2026-01-10 23:31:56,529 | INFO     | exeerrordiag: 
[2026-01-11 00:35:48] 2026-01-10 23:31:56,529 | INFO     | exitcode: 0
[2026-01-11 00:35:48] 2026-01-10 23:31:56,529 | INFO     | exitmsg: OK
[2026-01-11 00:35:48] 2026-01-10 23:31:56,529 | INFO     | cpuconsumptiontime: 60191 s
[2026-01-11 00:35:48] 2026-01-10 23:31:56,529 | INFO     | nevents: 400
[2026-01-11 00:35:48] 2026-01-10 23:31:56,529 | INFO     | neventsw: 0
[2026-01-11 00:35:48] 2026-01-10 23:31:56,529 | INFO     | pid: 2092166
[2026-01-11 00:35:48] 2026-01-10 23:31:56,529 | INFO     | pgrp: 2092166
[2026-01-11 00:35:48] 2026-01-10 23:31:56,529 | INFO     | corecount: 4
[2026-01-11 00:35:48] 2026-01-10 23:31:56,529 | INFO     | event service: False
[2026-01-11 00:35:48] 2026-01-10 23:31:56,529 | INFO     | sizes: {0: 2283760, 1: 2283959, 5: 2284221, 12: 2284277, 15492: 2315466, 15495: 2324670, 15504: 2324808}
[2026-01-11 00:35:48] 2026-01-10 23:31:56,529 | INFO     | --------------------------------------------------
[2026-01-11 00:35:48] 2026-01-10 23:31:56,529 | INFO     | 
[2026-01-11 00:35:48] 2026-01-10 23:31:56,530 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2026-01-11 00:35:48] 2026-01-10 23:31:56,552 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 00:35:48] 2026-01-10 23:31:56,553 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 00:35:48] 2026-01-10 23:31:56,553 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 00:35:48] 2026-01-10 23:31:56,553 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 00:35:48] 2026-01-10 23:31:56,553 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 00:35:48] 2026-01-10 23:31:56,553 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 00:35:48] 2026-01-10 23:31:56,553 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 00:35:48] 2026-01-10 23:31:56,553 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 00:35:48] 2026-01-10 23:31:56,553 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 00:35:48] 2026-01-10 23:31:56,553 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 00:35:48] 2026-01-10 23:31:56,553 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 00:35:48] 2026-01-10 23:31:56,553 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 00:35:48] 2026-01-10 23:31:56,554 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 00:35:48] 2026-01-10 23:31:56,554 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 00:35:48] 2026-01-10 23:31:56,554 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 00:35:48] 2026-01-10 23:31:56,554 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 00:35:48] 2026-01-10 23:31:56,554 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 00:35:48] 2026-01-10 23:31:56,554 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 00:35:48] 2026-01-10 23:31:56,554 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 00:35:48] 2026-01-10 23:31:56,554 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 00:35:48] 2026-01-10 23:31:56,554 | INFO     | job 6965383266 has completed (purged errors)
[2026-01-11 00:35:48] 2026-01-10 23:31:56,555 | INFO     | overall cleanup function is called
[2026-01-11 00:35:48] 2026-01-10 23:31:57,563 | INFO     | --- collectZombieJob: --- 10, [2092166]
[2026-01-11 00:35:48] 2026-01-10 23:31:57,563 | INFO     | zombie collector waiting for pid 2092166
[2026-01-11 00:35:48] 2026-01-10 23:31:57,563 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 00:35:48] 2026-01-10 23:31:57,563 | INFO     | collected zombie processes
[2026-01-11 00:35:48] 2026-01-10 23:31:57,563 | INFO     | will attempt to kill all subprocesses of pid=2092166
[2026-01-11 00:35:48] 2026-01-10 23:31:58,003 | INFO     | process IDs to be killed: [2092166] (in reverse order)
[2026-01-11 00:35:48] 2026-01-10 23:31:58,124 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 00:35:48] 2026-01-10 23:31:58,125 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 00:35:48] 2026-01-10 23:31:58,141 | INFO     | did not find any defunct processes belonging to 2092166
[2026-01-11 00:35:48] 2026-01-10 23:31:58,157 | INFO     | did not find any defunct processes belonging to 2092166
[2026-01-11 00:35:48] 2026-01-10 23:31:58,157 | INFO     | ready for new job
[2026-01-11 00:35:48] 2026-01-10 23:31:58,157 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 00:35:48] 2026-01-10 23:31:58,160 | INFO     | ***************************************
[2026-01-11 00:35:48] 2026-01-10 23:31:58,160 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 00:35:48] 2026-01-10 23:31:58,160 | INFO     | ***************************************
[2026-01-11 00:35:48] 2026-01-10 23:31:58,160 | INFO     | 
[2026-01-11 00:35:48] 2026-01-10 23:31:58,164 | INFO     | architecture information:
[2026-01-11 00:35:48] 2026-01-10 23:31:58,165 | INFO     | executing command: cat /etc/os-release
[2026-01-11 00:35:48] 2026-01-10 23:31:58,183 | INFO     | cat /etc/os-release:
[2026-01-11 00:35:48] NAME="CentOS Linux"
[2026-01-11 00:35:48] VERSION="7 (Core)"
[2026-01-11 00:35:48] ID="centos"
[2026-01-11 00:35:48] ID_LIKE="rhel fedora"
[2026-01-11 00:35:48] VERSION_ID="7"
[2026-01-11 00:35:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 00:35:48] ANSI_COLOR="0;31"
[2026-01-11 00:35:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 00:35:48] HOME_URL="https://www.centos.org/"
[2026-01-11 00:35:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 00:35:48] 
[2026-01-11 00:35:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 00:35:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 00:35:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 00:35:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 00:35:48] 
[2026-01-11 00:35:48] 2026-01-10 23:31:58,183 | INFO     | ***************************************
[2026-01-11 00:35:48] 2026-01-10 23:31:58,686 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2026-01-11 00:35:48] 2026-01-10 23:31:58,706 | INFO     | sufficient remaining disk space (684423380992 B)
[2026-01-11 00:35:48] 2026-01-10 23:31:58,707 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 00:35:48] 2026-01-10 23:31:58,707 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 00:35:48] 2026-01-10 23:31:58,707 | INFO     | update_server=False
[2026-01-11 00:35:48] 2026-01-10 23:31:58,707 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 00:35:48] 2026-01-10 23:31:58,707 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 00:35:48] 2026-01-10 23:31:58,708 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 00:35:48] 2026-01-10 23:31:58,723 | INFO     | all job control threads have been joined
[2026-01-11 00:35:48] 2026-01-10 23:31:58,995 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 00:35:48] 2026-01-10 23:31:58,995 | INFO     | aborting loop
[2026-01-11 00:35:48] 2026-01-10 23:31:59,026 | INFO     | all payload control threads have been joined
[2026-01-11 00:35:48] 2026-01-10 23:31:59,361 | INFO     | all data control threads have been joined
[2026-01-11 00:35:48] 2026-01-10 23:31:59,711 | INFO     | [job] retrieve thread has finished
[2026-01-11 00:35:48] 2026-01-10 23:31:59,722 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 00:35:48] 2026-01-10 23:31:59,729 | INFO     | [job] control thread has finished
[2026-01-11 00:35:48] 2026-01-10 23:31:59,943 | INFO     | [data] copytool_in thread has finished
[2026-01-11 00:35:48] 2026-01-10 23:32:00,000 | INFO     | [job] job monitor thread has finished
[2026-01-11 00:35:48] 2026-01-10 23:32:00,023 | INFO     | [payload] failed_post thread has finished
[2026-01-11 00:35:48] 2026-01-10 23:32:00,032 | INFO     | [payload] control thread has finished
[2026-01-11 00:35:48] 2026-01-10 23:32:00,320 | INFO     | [job] validate thread has finished
[2026-01-11 00:35:48] 2026-01-10 23:32:00,367 | INFO     | [data] control thread has finished
[2026-01-11 00:35:48] 2026-01-10 23:32:00,615 | INFO     | [payload] validate_post thread has finished
[2026-01-11 00:35:48] 2026-01-10 23:32:00,711 | INFO     | [data] copytool_out thread has finished
[2026-01-11 00:35:48] 2026-01-10 23:32:00,964 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 00:35:48] 2026-01-10 23:32:00,964 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 00:35:48] 2026-01-10 23:32:00,990 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 00:35:48] 2026-01-10 23:32:01,512 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 00:35:48] 2026-01-10 23:32:02,518 | INFO     | [job] queue monitor thread has finished
[2026-01-11 00:35:48] 2026-01-10 23:32:02,714 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 00:35:48] 2026-01-10 23:32:29,302 | INFO     | PID=2073302 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 00:35:48] 2026-01-10 23:32:29,302 | INFO     | .. there are 5 such processes running
[2026-01-11 00:35:48] 2026-01-10 23:32:29,303 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 00:35:48] 2026-01-10 23:32:29,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 00:35:48] 2026-01-10 23:32:29,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 00:35:48] 2026-01-10 23:32:41,717 | INFO     | [monitor] cgroup control has ended
[2026-01-11 00:35:48] 2026-01-10 23:32:43,444 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22925805774656)>', '<ExcThread(monitor, started 22925568608000)>']
[2026-01-11 00:35:48] 2026-01-10 23:32:44,367 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 00:35:48] 2026-01-10 23:32:44,367 | INFO     | [monitor] control thread has ended
[2026-01-11 00:35:48] 2026-01-10 23:32:48,469 | INFO     | all workflow threads have been joined
[2026-01-11 00:35:48] 2026-01-10 23:32:48,470 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 00:35:48] 2026-01-10 23:32:48,471 | INFO     | traces error code: 0
[2026-01-11 00:35:48] 2026-01-10 23:32:48,471 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 00:35:48] 2026-01-10 23:32:48,660 [wrapper] ==== pilot stdout END ====
[2026-01-11 00:35:48] 2026-01-10 23:32:48,664 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 00:35:48] 2026-01-10 23:32:48,668 [wrapper] pilotpid: 2073302
[2026-01-11 00:35:48] 2026-01-10 23:32:48,670 [wrapper] Pilot exit status: 0
[2026-01-11 00:35:48] 2026-01-10 23:32:48,682 [wrapper] pandaids: 6965383266
[2026-01-11 00:35:48] 2026-01-10 23:32:48,766 [wrapper] cleanup supervisor_pilot 2370050 2073303
[2026-01-11 00:35:48] 2026-01-10 23:32:48,769 [wrapper] Test setup, not cleaning
[2026-01-11 00:35:48] 2026-01-10 23:32:48,772 [wrapper] apfmon messages muted
[2026-01-11 00:35:48] 2026-01-10 23:32:48,775 [wrapper] ==== wrapper stdout END ====
[2026-01-11 00:35:48] 2026-01-10 23:32:48,778 [wrapper] ==== wrapper stderr END ====
[2026-01-11 00:35:48]  *** Error codes and diagnostics ***
[2026-01-11 00:35:48]     "exeErrorCode": 0,
[2026-01-11 00:35:48]     "exeErrorDiag": "",
[2026-01-11 00:35:48]     "pilotErrorCode": 0,
[2026-01-11 00:35:48]     "pilotErrorDiag": "",
[2026-01-11 00:35:48]  *** Listing of results directory ***
[2026-01-11 00:35:48] total 437796
[2026-01-11 00:35:48] -rw-r--r-- 1 boinc boinc      5112 Jan 10 14:09 queuedata.json
[2026-01-11 00:35:48] -rw-r--r-- 1 boinc boinc    579449 Jan 10 14:09 pilot3.tar.gz
[2026-01-11 00:35:48] -rwx------ 1 boinc boinc     36322 Jan 10 14:10 runpilot2-wrapper.sh
[2026-01-11 00:35:48] -rw-r--r-- 1 boinc boinc       100 Jan 10 20:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 00:35:48] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 20:13 run_atlas
[2026-01-11 00:35:48] -rw-r--r-- 1 boinc boinc       105 Jan 10 20:13 job.xml
[2026-01-11 00:35:48] -rw-r--r-- 1 boinc boinc      6639 Jan 10 20:13 init_data.xml
[2026-01-11 00:35:48] -rw-r--r-- 2 boinc boinc 226284033 Jan 10 20:13 EVNT.47898824._001261.pool.root.1
[2026-01-11 00:35:48] -rw-r--r-- 2 boinc boinc    592410 Jan 10 20:13 input.tar.gz
[2026-01-11 00:35:48] -rw-r--r-- 2 boinc boinc     15847 Jan 10 20:13 start_atlas.sh
[2026-01-11 00:35:48] drwxrwx--x 2 boinc boinc      4096 Jan 10 20:13 shared
[2026-01-11 00:35:48] -rw-r--r-- 1 boinc boinc         0 Jan 10 20:13 boinc_lockfile
[2026-01-11 00:35:48] -rw-r--r-- 1 boinc boinc      2519 Jan 10 20:13 pandaJob.out
[2026-01-11 00:35:48] -rw------- 1 boinc boinc    989548 Jan 10 20:13 agis_schedconf.cvmfs.json
[2026-01-11 00:35:48] drwx------ 5 boinc boinc      4096 Jan 10 20:13 pilot3
[2026-01-11 00:35:48] -rw------- 1 boinc boinc 212877659 Jan 11 00:31 HITS.47898826._040406.pool.root.1
[2026-01-11 00:35:48] -rw-r--r-- 1 boinc boinc       529 Jan 11 00:31 boinc_task_state.xml
[2026-01-11 00:35:48] -rw------- 1 boinc boinc      1034 Jan 11 00:31 memory_monitor_summary.json
[2026-01-11 00:35:48] -rw------- 1 boinc boinc   1516240 Jan 11 00:31 agis_ddmendpoints.agis.ALL.json
[2026-01-11 00:35:48] -rw------- 1 boinc boinc    429634 Jan 11 00:31 log.47898826._040406.job.log.tgz.1
[2026-01-11 00:35:48] -rw------- 1 boinc boinc      7829 Jan 11 00:31 heartbeat.json
[2026-01-11 00:35:48] -rw------- 1 boinc boinc        95 Jan 11 00:32 pilot_heartbeat.json
[2026-01-11 00:35:48] -rw------- 1 boinc boinc      4833 Jan 11 00:32 pilotlog.txt
[2026-01-11 00:35:48] -rw------- 1 boinc boinc   2181267 Jan 11 00:32 log.47898826._040406.job.log.1
[2026-01-11 00:35:48] -rw------- 1 boinc boinc       357 Jan 11 00:32 output.list
[2026-01-11 00:35:48] -rw-r--r-- 1 boinc boinc       620 Jan 11 00:32 runtime_log
[2026-01-11 00:35:48] -rw------- 1 boinc boinc   2631680 Jan 11 00:32 result.tar.gz
[2026-01-11 00:35:48] -rw-r--r-- 1 boinc boinc      9206 Jan 11 00:32 runtime_log.err
[2026-01-11 00:35:48] -rw------- 1 boinc boinc       666 Jan 11 00:32 WemKDmUuny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPVhKDmGKnyJo.diag
[2026-01-11 00:35:48] -rw-r--r-- 1 boinc boinc        26 Jan 11 00:35 wrapper_checkpoint.txt
[2026-01-11 00:35:48] -rw-r--r-- 1 boinc boinc      8192 Jan 11 00:35 boinc_mmap_file
[2026-01-11 00:35:48] -rw-r--r-- 1 boinc boinc     21125 Jan 11 00:35 stderr.txt
[2026-01-11 00:35:48] HITS file was successfully produced:
[2026-01-11 00:35:48] -rw------- 1 boinc boinc 212877659 Jan 11 00:31 shared/HITS.pool.root.1
[2026-01-11 00:35:48]  *** Contents of shared directory: ***
[2026-01-11 00:35:48] total 432052
[2026-01-11 00:35:48] -rw-r--r-- 2 boinc boinc 226284033 Jan 10 20:13 ATLAS.root_0
[2026-01-11 00:35:48] -rw-r--r-- 2 boinc boinc    592410 Jan 10 20:13 input.tar.gz
[2026-01-11 00:35:48] -rw-r--r-- 2 boinc boinc     15847 Jan 10 20:13 start_atlas.sh
[2026-01-11 00:35:48] -rw------- 1 boinc boinc 212877659 Jan 11 00:31 HITS.pool.root.1
[2026-01-11 00:35:48] -rw------- 1 boinc boinc   2631680 Jan 11 00:32 result.tar.gz
00:35:50 (2067602): run_atlas exited; CPU time 60902.290925
00:35:50 (2067602): called boinc_finish(0)

</stderr_txt>
]]>

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