Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:04:13 (1755634): wrapper (7.7.26015): starting
02:04:13 (1755634): wrapper: running run_atlas (--nthreads 12)
[2026-01-11 02:04:13] Arguments: --nthreads 12
[2026-01-11 02:04:13] Threads: 12
[2026-01-11 02:04:13] Checking for CVMFS
[2026-01-11 02:04:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 02:04:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 02:04:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 02:04:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 02:04:14] 2.13.3.0 4294 4780 114056 154998 3 188 38960678 46080000 922 130560 0 10168194 99.996 177594 932 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-11 02:04:14] CVMFS is ok
[2026-01-11 02:04:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 02:04:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 02:04:14] Further information can be found at the LHC@home message board.
[2026-01-11 02:04:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 02:04:14] Checking for apptainer binary...
[2026-01-11 02:04:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 02:04:14] Running /usr/bin/apptainer --version
[2026-01-11 02:04:14] apptainer version 1.4.5-2.el9
[2026-01-11 02:04:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 02:04:14] gpu01.farm.particle.cz
[2026-01-11 02:04:14] apptainer works
[2026-01-11 02:04:14] Set ATHENA_PROC_NUMBER=12
[2026-01-11 02:04:14] Set ATHENA_CORE_NUMBER=12
[2026-01-11 02:04:14] Starting ATLAS job with PandaID=6965382673
[2026-01-11 02:04:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 03:02:32]  *** The last 200 lines of the pilot log: ***
[2026-01-11 03:02:32]  mtime=0
[2026-01-11 03:02:32]  protocol_id=None
[2026-01-11 03:02:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-11 03:02:32]  replicas=None
[2026-01-11 03:02:32]  scope=mc23_13p6TeV
[2026-01-11 03:02:32]  status=None
[2026-01-11 03:02:32]  status_code=0
[2026-01-11 03:02:32]  storage_token=
[2026-01-11 03:02:32]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6965382673/log.47898826._040249.job.log.tgz.1
[2026-01-11 03:02:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/f6/log.47898826._040249.job.log.tgz.1
[2026-01-11 03:02:32]  workdir=None
[2026-01-11 03:02:32] ]
[2026-01-11 03:02:32] 2026-01-11 02:01:42,319 | INFO     | transferring file log.47898826._040249.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6965382673/log.47898826._040249.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-11 03:02:32] 2026-01-11 02:01:42,319 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6965382673/log.47898826._040249.job.log.tgz.1 /var/lib/boinc/slots/0/log.47898826._040249.job
[2026-01-11 03:02:32] 2026-01-11 02:01:42,333 | INFO     | adding to output.list: log.47898826._040249.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/f6/log.47898826._040249.job.log.tg
[2026-01-11 03:02:32] 2026-01-11 02:01:42,333 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 03:02:32] 2026-01-11 02:01:42,333 | INFO     | summary of transferred files:
[2026-01-11 03:02:32] 2026-01-11 02:01:42,333 | INFO     |  -- lfn=log.47898826._040249.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 03:02:32] 2026-01-11 02:01:42,333 | INFO     | stage-out finished correctly
[2026-01-11 03:02:32] 2026-01-11 02:01:43,382 | INFO     | monitor loop #263: job 0:6965382673 is in state 'finished'
[2026-01-11 03:02:32] 2026-01-11 02:01:43,382 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 03:02:32] 2026-01-11 02:01:44,052 | INFO     | time since job start (3442s) is within the limit (349056.0s)
[2026-01-11 03:02:32] 2026-01-11 02:01:44,549 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 03:02:32] 2026-01-11 02:01:45,065 | INFO     | job 6965382673 has state=finished
[2026-01-11 03:02:32] 2026-01-11 02:01:45,065 | INFO     | preparing for final server update for job 6965382673 in state='finished'
[2026-01-11 03:02:32] 2026-01-11 02:01:45,066 | INFO     | this job has now completed (state=finished)
[2026-01-11 03:02:32] 2026-01-11 02:01:45,066 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 03:02:32] 2026-01-11 02:01:45,066 | INFO     | log transfer has been attempted: DONE
[2026-01-11 03:02:32] 2026-01-11 02:01:45,066 | INFO     | job 6965382673 has finished - writing final server update
[2026-01-11 03:02:32] 2026-01-11 02:01:45,066 | INFO     | total number of processed events: 400 (read)
[2026-01-11 03:02:32] 2026-01-11 02:01:45,067 | INFO     | executing command: lscpu
[2026-01-11 03:02:32] 2026-01-11 02:01:45,093 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 03:02:32] 2026-01-11 02:01:45,885 | INFO     | monitor loop #264: job 0:6965382673 is in state 'finished'
[2026-01-11 03:02:32] 2026-01-11 02:01:45,885 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 03:02:32] 2026-01-11 02:01:46,057 | INFO     | time since job start (3444s) is within the limit (349056.0s)
[2026-01-11 03:02:32] 2026-01-11 02:01:47,182 | INFO     | PID=1760007 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 03:02:32] 2026-01-11 02:01:47,182 | INFO     | .. there are 2 such processes running
[2026-01-11 03:02:32] 2026-01-11 02:01:47,749 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 03:02:32] 2026-01-11 02:01:47,753 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3222.3178437500005
[2026-01-11 03:02:32] 2026-01-11 02:01:47,759 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6965382673/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 03:02:32] 2026-01-11 02:01:47,759 | INFO     | extracted standard info from prmon json
[2026-01-11 03:02:32] 2026-01-11 02:01:47,759 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 03:02:32] 2026-01-11 02:01:47,759 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 03:02:32] 2026-01-11 02:01:47,760 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 03:02:32] 2026-01-11 02:01:47,760 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 03:02:32] 2026-01-11 02:01:47,761 | INFO     | fitting pss+swap vs Time
[2026-01-11 03:02:32] 2026-01-11 02:01:47,761 | INFO     | sum of square deviations: 36465800.0
[2026-01-11 03:02:32] 2026-01-11 02:01:47,761 | INFO     | sum of deviations: -914406774.9999999
[2026-01-11 03:02:32] 2026-01-11 02:01:47,761 | INFO     | mean x: 1768095252.0
[2026-01-11 03:02:32] 2026-01-11 02:01:47,762 | INFO     | mean y: 2743599.5306122447
[2026-01-11 03:02:32] 2026-01-11 02:01:47,762 | INFO     | intersect: 44339033418.32335
[2026-01-11 03:02:32] 2026-01-11 02:01:47,762 | INFO     | chi2: 0.017267915670510583
[2026-01-11 03:02:32] 2026-01-11 02:01:47,762 | INFO     | current memory leak: -25.08 B/s (using 49 data points, chi2=0.02)
[2026-01-11 03:02:32] 2026-01-11 02:01:47,762 | INFO     | could have reported an average CPU frequency of 3229 MHz (5 samples)
[2026-01-11 03:02:32] 2026-01-11 02:01:47,762 | INFO     | ..............................
[2026-01-11 03:02:32] 2026-01-11 02:01:47,762 | INFO     | . Timing measurements:
[2026-01-11 03:02:32] 2026-01-11 02:01:47,762 | INFO     | . get job = 0 s
[2026-01-11 03:02:32] 2026-01-11 02:01:47,762 | INFO     | . initial setup = 2 s
[2026-01-11 03:02:32] 2026-01-11 02:01:47,763 | INFO     | . payload setup = 3 s
[2026-01-11 03:02:32] 2026-01-11 02:01:47,763 | INFO     | . stage-in = 0 s
[2026-01-11 03:02:32] 2026-01-11 02:01:47,763 | INFO     | . payload execution = 3418 s
[2026-01-11 03:02:32] 2026-01-11 02:01:47,763 | INFO     | . stage-out = 0 s
[2026-01-11 03:02:32] 2026-01-11 02:01:47,763 | INFO     | . log creation = 0 s
[2026-01-11 03:02:32] 2026-01-11 02:01:47,763 | INFO     | ..............................
[2026-01-11 03:02:32] 2026-01-11 02:01:47,814 | INFO     | 
[2026-01-11 03:02:32] 2026-01-11 02:01:47,815 | INFO     | job summary report
[2026-01-11 03:02:32] 2026-01-11 02:01:47,815 | INFO     | --------------------------------------------------
[2026-01-11 03:02:32] 2026-01-11 02:01:47,815 | INFO     | PanDA job id: 6965382673
[2026-01-11 03:02:32] 2026-01-11 02:01:47,815 | INFO     | task id: 47898826
[2026-01-11 03:02:32] 2026-01-11 02:01:47,815 | INFO     | errors: (none)
[2026-01-11 03:02:32] 2026-01-11 02:01:47,815 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 03:02:32] 2026-01-11 02:01:47,815 | INFO     | pilot state: finished 
[2026-01-11 03:02:32] 2026-01-11 02:01:47,815 | INFO     | transexitcode: 0
[2026-01-11 03:02:32] 2026-01-11 02:01:47,815 | INFO     | exeerrorcode: 0
[2026-01-11 03:02:32] 2026-01-11 02:01:47,815 | INFO     | exeerrordiag: 
[2026-01-11 03:02:32] 2026-01-11 02:01:47,816 | INFO     | exitcode: 0
[2026-01-11 03:02:32] 2026-01-11 02:01:47,816 | INFO     | exitmsg: OK
[2026-01-11 03:02:32] 2026-01-11 02:01:47,816 | INFO     | cpuconsumptiontime: 37446 s
[2026-01-11 03:02:32] 2026-01-11 02:01:47,816 | INFO     | nevents: 400
[2026-01-11 03:02:32] 2026-01-11 02:01:47,816 | INFO     | neventsw: 0
[2026-01-11 03:02:32] 2026-01-11 02:01:47,816 | INFO     | pid: 1766779
[2026-01-11 03:02:32] 2026-01-11 02:01:47,816 | INFO     | pgrp: 1766779
[2026-01-11 03:02:32] 2026-01-11 02:01:47,816 | INFO     | corecount: 12
[2026-01-11 03:02:32] 2026-01-11 02:01:47,816 | INFO     | event service: False
[2026-01-11 03:02:32] 2026-01-11 02:01:47,816 | INFO     | sizes: {0: 2283918, 3: 2284180, 11: 2284208, 3425: 2309960, 3426: 2318958, 3428: 2319014, 3432: 2319368}
[2026-01-11 03:02:32] 2026-01-11 02:01:47,816 | INFO     | --------------------------------------------------
[2026-01-11 03:02:32] 2026-01-11 02:01:47,816 | INFO     | 
[2026-01-11 03:02:32] 2026-01-11 02:01:47,816 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-11 03:02:32] 2026-01-11 02:01:47,831 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 03:02:32] 2026-01-11 02:01:47,831 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 03:02:32] 2026-01-11 02:01:47,831 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 03:02:32] 2026-01-11 02:01:47,831 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 03:02:32] 2026-01-11 02:01:47,831 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 03:02:32] 2026-01-11 02:01:47,831 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 03:02:32] 2026-01-11 02:01:47,831 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 03:02:32] 2026-01-11 02:01:47,832 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 03:02:32] 2026-01-11 02:01:47,832 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 03:02:32] 2026-01-11 02:01:47,832 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 03:02:32] 2026-01-11 02:01:47,832 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 03:02:32] 2026-01-11 02:01:47,832 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 03:02:32] 2026-01-11 02:01:47,832 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 03:02:32] 2026-01-11 02:01:47,832 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 03:02:32] 2026-01-11 02:01:47,832 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 03:02:32] 2026-01-11 02:01:47,832 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 03:02:32] 2026-01-11 02:01:47,832 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 03:02:32] 2026-01-11 02:01:47,832 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 03:02:32] 2026-01-11 02:01:47,832 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 03:02:32] 2026-01-11 02:01:47,832 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 03:02:32] 2026-01-11 02:01:47,833 | INFO     | job 6965382673 has completed (purged errors)
[2026-01-11 03:02:32] 2026-01-11 02:01:47,833 | INFO     | overall cleanup function is called
[2026-01-11 03:02:32] 2026-01-11 02:01:48,841 | INFO     | --- collectZombieJob: --- 10, [1766779]
[2026-01-11 03:02:32] 2026-01-11 02:01:48,841 | INFO     | zombie collector waiting for pid 1766779
[2026-01-11 03:02:32] 2026-01-11 02:01:48,841 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 03:02:32] 2026-01-11 02:01:48,841 | INFO     | collected zombie processes
[2026-01-11 03:02:32] 2026-01-11 02:01:48,841 | INFO     | will attempt to kill all subprocesses of pid=1766779
[2026-01-11 03:02:32] 2026-01-11 02:01:48,933 | INFO     | process IDs to be killed: [1766779] (in reverse order)
[2026-01-11 03:02:32] 2026-01-11 02:01:48,971 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 03:02:32] 2026-01-11 02:01:48,972 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 03:02:32] 2026-01-11 02:01:48,975 | INFO     | did not find any defunct processes belonging to 1766779
[2026-01-11 03:02:32] 2026-01-11 02:01:48,978 | INFO     | did not find any defunct processes belonging to 1766779
[2026-01-11 03:02:32] 2026-01-11 02:01:48,978 | INFO     | ready for new job
[2026-01-11 03:02:32] 2026-01-11 02:01:48,978 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 03:02:32] 2026-01-11 02:01:48,979 | INFO     | ***************************************
[2026-01-11 03:02:32] 2026-01-11 02:01:48,979 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 03:02:32] 2026-01-11 02:01:48,979 | INFO     | ***************************************
[2026-01-11 03:02:32] 2026-01-11 02:01:48,979 | INFO     | 
[2026-01-11 03:02:32] 2026-01-11 02:01:48,981 | INFO     | architecture information:
[2026-01-11 03:02:32] 2026-01-11 02:01:48,981 | INFO     | executing command: cat /etc/os-release
[2026-01-11 03:02:32] 2026-01-11 02:01:48,992 | INFO     | cat /etc/os-release:
[2026-01-11 03:02:32] NAME="CentOS Linux"
[2026-01-11 03:02:32] VERSION="7 (Core)"
[2026-01-11 03:02:32] ID="centos"
[2026-01-11 03:02:32] ID_LIKE="rhel fedora"
[2026-01-11 03:02:32] VERSION_ID="7"
[2026-01-11 03:02:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 03:02:32] ANSI_COLOR="0;31"
[2026-01-11 03:02:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 03:02:32] HOME_URL="https://www.centos.org/"
[2026-01-11 03:02:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 03:02:32] 
[2026-01-11 03:02:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 03:02:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 03:02:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 03:02:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 03:02:32] 
[2026-01-11 03:02:32] 2026-01-11 02:01:48,992 | INFO     | ***************************************
[2026-01-11 03:02:32] 2026-01-11 02:01:49,495 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-11 03:02:32] 2026-01-11 02:01:49,508 | INFO     | sufficient remaining disk space (41371566080 B)
[2026-01-11 03:02:32] 2026-01-11 02:01:49,508 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 03:02:32] 2026-01-11 02:01:49,508 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 03:02:32] 2026-01-11 02:01:49,509 | INFO     | update_server=False
[2026-01-11 03:02:32] 2026-01-11 02:01:49,509 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 03:02:32] 2026-01-11 02:01:49,509 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 03:02:32] 2026-01-11 02:01:49,509 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 03:02:32] 2026-01-11 02:01:49,509 | INFO     | aborting loop
[2026-01-11 03:02:32] 2026-01-11 02:01:49,751 | INFO     | all data control threads have been joined
[2026-01-11 03:02:32] 2026-01-11 02:01:49,835 | INFO     | all job control threads have been joined
[2026-01-11 03:02:32] 2026-01-11 02:01:49,942 | INFO     | all payload control threads have been joined
[2026-01-11 03:02:32] 2026-01-11 02:01:50,392 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 03:02:32] 2026-01-11 02:01:50,514 | INFO     | [job] job monitor thread has finished
[2026-01-11 03:02:32] 2026-01-11 02:01:50,514 | INFO     | [job] retrieve thread has finished
[2026-01-11 03:02:32] 2026-01-11 02:01:50,514 | INFO     | [job] queue monitor thread has finished
[2026-01-11 03:02:32] 2026-01-11 02:01:50,608 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 03:02:32] 2026-01-11 02:01:50,756 | INFO     | [data] control thread has finished
[2026-01-11 03:02:32] 2026-01-11 02:01:50,841 | INFO     | [job] control thread has finished
[2026-01-11 03:02:32] 2026-01-11 02:01:50,947 | INFO     | [payload] control thread has finished
[2026-01-11 03:02:32] 2026-01-11 02:01:50,949 | INFO     | [payload] failed_post thread has finished
[2026-01-11 03:02:32] 2026-01-11 02:01:51,130 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 03:02:32] 2026-01-11 02:01:51,704 | INFO     | [job] validate thread has finished
[2026-01-11 03:02:32] 2026-01-11 02:01:51,739 | INFO     | [data] copytool_in thread has finished
[2026-01-11 03:02:32] 2026-01-11 02:01:51,783 | INFO     | [payload] validate_post thread has finished
[2026-01-11 03:02:32] 2026-01-11 02:01:51,862 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 03:02:32] 2026-01-11 02:01:51,968 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 03:02:32] 2026-01-11 02:01:52,398 | INFO     | [data] copytool_out thread has finished
[2026-01-11 03:02:32] 2026-01-11 02:01:54,613 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 03:02:32] 2026-01-11 02:02:00,030 | INFO     | job.realtimelogging is not enabled
[2026-01-11 03:02:32] 2026-01-11 02:02:01,035 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 03:02:32] 2026-01-11 02:02:19,352 | INFO     | PID=1760007 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 03:02:32] 2026-01-11 02:02:19,352 | INFO     | .. there are 2 such processes running
[2026-01-11 03:02:32] 2026-01-11 02:02:19,352 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 03:02:32] 2026-01-11 02:02:19,353 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 03:02:32] 2026-01-11 02:02:19,353 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 03:02:32] 2026-01-11 02:02:26,712 | INFO     | [monitor] cgroup control has ended
[2026-01-11 03:02:32] 2026-01-11 02:02:27,459 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139795659327296)>', '<ExcThread(monitor, started 139795187615488)>']
[2026-01-11 03:02:32] 2026-01-11 02:02:28,398 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 03:02:32] 2026-01-11 02:02:28,398 | INFO     | [monitor] control thread has ended
[2026-01-11 03:02:32] 2026-01-11 02:02:32,484 | INFO     | all workflow threads have been joined
[2026-01-11 03:02:32] 2026-01-11 02:02:32,487 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 03:02:32] 2026-01-11 02:02:32,487 | INFO     | traces error code: 0
[2026-01-11 03:02:32] 2026-01-11 02:02:32,487 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 03:02:32] 2026-01-11 02:02:32,554 [wrapper] ==== pilot stdout END ====
[2026-01-11 03:02:32] 2026-01-11 02:02:32,556 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 03:02:32] 2026-01-11 02:02:32,557 [wrapper] pilotpid: 1760007
[2026-01-11 03:02:32] 2026-01-11 02:02:32,559 [wrapper] Pilot exit status: 0
[2026-01-11 03:02:32] 2026-01-11 02:02:32,567 [wrapper] pandaids: 6965382673
[2026-01-11 03:02:32] 2026-01-11 02:02:32,592 [wrapper] cleanup supervisor_pilot 1820592 1760008
[2026-01-11 03:02:32] 2026-01-11 02:02:32,594 [wrapper] Test setup, not cleaning
[2026-01-11 03:02:32] 2026-01-11 02:02:32,596 [wrapper] apfmon messages muted
[2026-01-11 03:02:32] 2026-01-11 02:02:32,598 [wrapper] ==== wrapper stdout END ====
[2026-01-11 03:02:32] 2026-01-11 02:02:32,600 [wrapper] ==== wrapper stderr END ====
[2026-01-11 03:02:32]  *** Error codes and diagnostics ***
[2026-01-11 03:02:32]     "exeErrorCode": 0,
[2026-01-11 03:02:32]     "exeErrorDiag": "",
[2026-01-11 03:02:32]     "pilotErrorCode": 0,
[2026-01-11 03:02:32]     "pilotErrorDiag": "",
[2026-01-11 03:02:32]  *** Listing of results directory ***
[2026-01-11 03:02:32] total 444368
[2026-01-11 03:02:32] -rw-r--r-- 1 boinc boinc      5112 Jan 10 14:09 queuedata.json
[2026-01-11 03:02:32] -rw-r--r-- 1 boinc boinc    579449 Jan 10 14:09 pilot3.tar.gz
[2026-01-11 03:02:32] -rwx------ 1 boinc boinc     36322 Jan 10 14:10 runpilot2-wrapper.sh
[2026-01-11 03:02:32] -rw-r--r-- 1 boinc boinc       100 Jan 11 02:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 03:02:32] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 02:04 run_atlas
[2026-01-11 03:02:32] -rw-r--r-- 1 boinc boinc       105 Jan 11 02:04 job.xml
[2026-01-11 03:02:32] -rw-r--r-- 1 boinc boinc      9456 Jan 11 02:04 init_data.xml
[2026-01-11 03:02:32] -rw-r--r-- 2 boinc boinc 223096712 Jan 11 02:04 EVNT.47898824._001009.pool.root.1
[2026-01-11 03:02:32] -rw-r--r-- 2 boinc boinc     15847 Jan 11 02:04 start_atlas.sh
[2026-01-11 03:02:32] drwxrwx--x 2 boinc boinc      4096 Jan 11 02:04 shared
[2026-01-11 03:02:32] -rw-r--r-- 2 boinc boinc    592410 Jan 11 02:04 input.tar.gz
[2026-01-11 03:02:32] -rw-r--r-- 1 boinc boinc         0 Jan 11 02:04 boinc_lockfile
[2026-01-11 03:02:32] -rw-r--r-- 1 boinc boinc      2518 Jan 11 02:04 pandaJob.out
[2026-01-11 03:02:32] -rw------- 1 boinc boinc    989540 Jan 11 02:04 agis_schedconf.cvmfs.json
[2026-01-11 03:02:32] -rw------- 1 boinc boinc   1516240 Jan 11 02:04 agis_ddmendpoints.agis.ALL.json
[2026-01-11 03:02:32] drwx------ 5 boinc boinc      4096 Jan 11 02:04 pilot3
[2026-01-11 03:02:32] -rw------- 1 boinc boinc 226198564 Jan 11 03:01 HITS.47898826._040249.pool.root.1
[2026-01-11 03:02:32] -rw-r--r-- 1 boinc boinc       529 Jan 11 03:01 boinc_task_state.xml
[2026-01-11 03:02:32] -rw------- 1 boinc boinc      1013 Jan 11 03:01 memory_monitor_summary.json
[2026-01-11 03:02:32] -rw------- 1 boinc boinc    382052 Jan 11 03:01 log.47898826._040249.job.log.tgz.1
[2026-01-11 03:02:32] -rw------- 1 boinc boinc      7764 Jan 11 03:01 heartbeat.json
[2026-01-11 03:02:32] -rw------- 1 boinc boinc        95 Jan 11 03:02 pilot_heartbeat.json
[2026-01-11 03:02:32] -rw-r--r-- 1 boinc boinc      8192 Jan 11 03:02 boinc_mmap_file
[2026-01-11 03:02:32] -rw-r--r-- 1 boinc boinc        27 Jan 11 03:02 wrapper_checkpoint.txt
[2026-01-11 03:02:32] -rw------- 1 boinc boinc      4895 Jan 11 03:02 pilotlog.txt
[2026-01-11 03:02:32] -rw------- 1 boinc boinc    528051 Jan 11 03:02 log.47898826._040249.job.log.1
[2026-01-11 03:02:32] -rw------- 1 boinc boinc       357 Jan 11 03:02 output.list
[2026-01-11 03:02:32] -rw-r--r-- 1 boinc boinc       620 Jan 11 03:02 runtime_log
[2026-01-11 03:02:32] -rw------- 1 boinc boinc    931840 Jan 11 03:02 result.tar.gz
[2026-01-11 03:02:32] -rw-r--r-- 1 boinc boinc      8854 Jan 11 03:02 runtime_log.err
[2026-01-11 03:02:32] -rw------- 1 boinc boinc       659 Jan 11 03:02 jlrMDmTuny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2ThKDmmCEx7n.diag
[2026-01-11 03:02:32] -rw-r--r-- 1 boinc boinc     21815 Jan 11 03:02 stderr.txt
[2026-01-11 03:02:32] HITS file was successfully produced:
[2026-01-11 03:02:32] -rw------- 1 boinc boinc 226198564 Jan 11 03:01 shared/HITS.pool.root.1
[2026-01-11 03:02:32]  *** Contents of shared directory: ***
[2026-01-11 03:02:32] total 440280
[2026-01-11 03:02:32] -rw-r--r-- 2 boinc boinc 223096712 Jan 11 02:04 ATLAS.root_0
[2026-01-11 03:02:32] -rw-r--r-- 2 boinc boinc     15847 Jan 11 02:04 start_atlas.sh
[2026-01-11 03:02:32] -rw-r--r-- 2 boinc boinc    592410 Jan 11 02:04 input.tar.gz
[2026-01-11 03:02:32] -rw------- 1 boinc boinc 226198564 Jan 11 03:01 HITS.pool.root.1
[2026-01-11 03:02:32] -rw------- 1 boinc boinc    931840 Jan 11 03:02 result.tar.gz
03:02:33 (1755634): run_atlas exited; CPU time 37482.700758
03:02:33 (1755634): called boinc_finish(0)

</stderr_txt>
]]>

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