Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
16:15:06 (2470046): wrapper (7.7.26015): starting
16:15:06 (2470046): wrapper: running run_atlas (--nthreads 12)
[2026-01-11 16:15:06] Arguments: --nthreads 12
[2026-01-11 16:15:06] Threads: 12
[2026-01-11 16:15:06] Checking for CVMFS
[2026-01-11 16:15:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 16:15:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 16:15:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 16:15:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 16:15:08] 2.13.3.0 40677 3503 55244 155022 3 51 3290655 4096000 10921 130560 0 18844220 99.971 345499 269 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-11 16:15:08] CVMFS is ok
[2026-01-11 16:15:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 16:15:08] Checking for apptainer binary...
[2026-01-11 16:15:08] apptainer is not installed, using version from CVMFS
[2026-01-11 16:15:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 16:15:10] epyc7v12
[2026-01-11 16:15:10] apptainer works
[2026-01-11 16:15:10] Set ATHENA_PROC_NUMBER=12
[2026-01-11 16:15:10] Set ATHENA_CORE_NUMBER=12
[2026-01-11 16:15:10] Starting ATLAS job with PandaID=6965384211
[2026-01-11 16:15:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 17:17:19]  *** The last 200 lines of the pilot log: ***
[2026-01-11 17:17:19] 2026-01-11 17:16:26,878 | INFO     | time since job start (3633s) is within the limit (349056.0s)
[2026-01-11 17:17:19] 2026-01-11 17:16:27,449 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 17:17:19] 2026-01-11 17:16:27,512 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2522.0415937500006
[2026-01-11 17:17:19] 2026-01-11 17:16:27,564 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6965384211/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 17:17:19] 2026-01-11 17:16:27,565 | INFO     | extracted standard info from prmon json
[2026-01-11 17:17:19] 2026-01-11 17:16:27,566 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 17:17:19] 2026-01-11 17:16:27,566 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 17:17:19] 2026-01-11 17:16:27,571 | INFO     | fitting pss+swap vs Time
[2026-01-11 17:17:19] 2026-01-11 17:16:27,571 | INFO     | sum of square deviations: 41088055.333333395
[2026-01-11 17:17:19] 2026-01-11 17:16:27,572 | INFO     | sum of deviations: -6201348081.666666
[2026-01-11 17:17:19] 2026-01-11 17:16:27,572 | INFO     | mean x: 1768150063.6666667
[2026-01-11 17:17:19] 2026-01-11 17:16:27,572 | INFO     | mean y: 2731338.3725490198
[2026-01-11 17:17:19] 2026-01-11 17:16:27,572 | INFO     | intersect: 266866517333.1943
[2026-01-11 17:17:19] 2026-01-11 17:16:27,572 | INFO     | chi2: 2.3514810372603097
[2026-01-11 17:17:19] 2026-01-11 17:16:27,572 | INFO     | current memory leak: -150.93 B/s (using 51 data points, chi2=2.35)
[2026-01-11 17:17:19] 2026-01-11 17:16:27,573 | INFO     | could have reported an average CPU frequency of 2525 MHz (5 samples)
[2026-01-11 17:17:19] 2026-01-11 17:16:27,590 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 17:17:19] 2026-01-11 17:16:29,346 | INFO     | PID=2474267 has CPU usage=14.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-11 17:17:19] 2026-01-11 17:16:29,347 | INFO     | .. there are 12 such processes running
[2026-01-11 17:17:19] 2026-01-11 17:16:30,084 | INFO     | monitor loop #246: job 0:6965384211 is in state 'finished'
[2026-01-11 17:17:19] 2026-01-11 17:16:30,084 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 17:17:19] 2026-01-11 17:16:30,348 | INFO     | time since job start (3637s) is within the limit (349056.0s)
[2026-01-11 17:17:19] 2026-01-11 17:16:32,357 | INFO     | time since job start (3639s) is within the limit (349056.0s)
[2026-01-11 17:17:19] 2026-01-11 17:16:32,587 | INFO     | monitor loop #247: job 0:6965384211 is in state 'finished'
[2026-01-11 17:17:19] 2026-01-11 17:16:32,587 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 17:17:19] 2026-01-11 17:16:34,363 | INFO     | time since job start (3641s) is within the limit (349056.0s)
[2026-01-11 17:17:19] 2026-01-11 17:16:35,090 | INFO     | monitor loop #248: job 0:6965384211 is in state 'finished'
[2026-01-11 17:17:19] 2026-01-11 17:16:35,090 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 17:17:19] 2026-01-11 17:16:36,371 | INFO     | time since job start (3643s) is within the limit (349056.0s)
[2026-01-11 17:17:19] 2026-01-11 17:16:37,599 | INFO     | monitor loop #249: job 0:6965384211 is in state 'finished'
[2026-01-11 17:17:19] 2026-01-11 17:16:37,599 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 17:17:19] 2026-01-11 17:16:38,384 | INFO     | time since job start (3645s) is within the limit (349056.0s)
[2026-01-11 17:17:19] 2026-01-11 17:16:40,112 | INFO     | monitor loop #250: job 0:6965384211 is in state 'finished'
[2026-01-11 17:17:19] 2026-01-11 17:16:40,112 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 17:17:19] 2026-01-11 17:16:40,391 | INFO     | time since job start (3647s) is within the limit (349056.0s)
[2026-01-11 17:17:19] 2026-01-11 17:16:42,402 | INFO     | time since job start (3649s) is within the limit (349056.0s)
[2026-01-11 17:17:19] 2026-01-11 17:16:42,619 | INFO     | monitor loop #251: job 0:6965384211 is in state 'finished'
[2026-01-11 17:17:19] 2026-01-11 17:16:42,619 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 17:17:19] 2026-01-11 17:16:44,414 | INFO     | time since job start (3651s) is within the limit (349056.0s)
[2026-01-11 17:17:19] 2026-01-11 17:16:44,543 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 17:17:19] 2026-01-11 17:16:44,591 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2513.2449531250004
[2026-01-11 17:17:19] 2026-01-11 17:16:44,644 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6965384211/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 17:17:19] 2026-01-11 17:16:44,647 | INFO     | extracted standard info from prmon json
[2026-01-11 17:17:19] 2026-01-11 17:16:44,648 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 17:17:19] 2026-01-11 17:16:44,648 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 17:17:19] 2026-01-11 17:16:44,652 | INFO     | fitting pss+swap vs Time
[2026-01-11 17:17:19] 2026-01-11 17:16:44,652 | INFO     | sum of square deviations: 41088055.333333395
[2026-01-11 17:17:19] 2026-01-11 17:16:44,652 | INFO     | sum of deviations: -6201348081.666666
[2026-01-11 17:17:19] 2026-01-11 17:16:44,652 | INFO     | mean x: 1768150063.6666667
[2026-01-11 17:17:19] 2026-01-11 17:16:44,653 | INFO     | mean y: 2731338.3725490198
[2026-01-11 17:17:19] 2026-01-11 17:16:44,653 | INFO     | intersect: 266866517333.1943
[2026-01-11 17:17:19] 2026-01-11 17:16:44,655 | INFO     | chi2: 2.3514810372603097
[2026-01-11 17:17:19] 2026-01-11 17:16:44,655 | INFO     | current memory leak: -150.93 B/s (using 51 data points, chi2=2.35)
[2026-01-11 17:17:19] 2026-01-11 17:16:44,655 | INFO     | could have reported an average CPU frequency of 2523 MHz (6 samples)
[2026-01-11 17:17:19] 2026-01-11 17:16:44,656 | INFO     | ..............................
[2026-01-11 17:17:19] 2026-01-11 17:16:44,656 | INFO     | . Timing measurements:
[2026-01-11 17:17:19] 2026-01-11 17:16:44,656 | INFO     | . get job = 0 s
[2026-01-11 17:17:19] 2026-01-11 17:16:44,656 | INFO     | . initial setup = 4 s
[2026-01-11 17:17:19] 2026-01-11 17:16:44,656 | INFO     | . payload setup = 21 s
[2026-01-11 17:17:19] 2026-01-11 17:16:44,656 | INFO     | . stage-in = 0 s
[2026-01-11 17:17:19] 2026-01-11 17:16:44,656 | INFO     | . payload execution = 3550 s
[2026-01-11 17:17:19] 2026-01-11 17:16:44,656 | INFO     | . stage-out = 1 s
[2026-01-11 17:17:19] 2026-01-11 17:16:44,656 | INFO     | . log creation = 0 s
[2026-01-11 17:17:19] 2026-01-11 17:16:44,656 | INFO     | ..............................
[2026-01-11 17:17:19] 2026-01-11 17:16:45,432 | INFO     | 
[2026-01-11 17:17:19] 2026-01-11 17:16:45,433 | INFO     | job summary report
[2026-01-11 17:17:19] 2026-01-11 17:16:45,433 | INFO     | --------------------------------------------------
[2026-01-11 17:17:19] 2026-01-11 17:16:45,433 | INFO     | PanDA job id: 6965384211
[2026-01-11 17:17:19] 2026-01-11 17:16:45,433 | INFO     | task id: 47962010
[2026-01-11 17:17:19] 2026-01-11 17:16:45,433 | INFO     | errors: (none)
[2026-01-11 17:17:19] 2026-01-11 17:16:45,433 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 17:17:19] 2026-01-11 17:16:45,433 | INFO     | pilot state: finished 
[2026-01-11 17:17:19] 2026-01-11 17:16:45,433 | INFO     | transexitcode: 0
[2026-01-11 17:17:19] 2026-01-11 17:16:45,433 | INFO     | exeerrorcode: 0
[2026-01-11 17:17:19] 2026-01-11 17:16:45,434 | INFO     | exeerrordiag: 
[2026-01-11 17:17:19] 2026-01-11 17:16:45,434 | INFO     | exitcode: 0
[2026-01-11 17:17:19] 2026-01-11 17:16:45,434 | INFO     | exitmsg: OK
[2026-01-11 17:17:19] 2026-01-11 17:16:45,434 | INFO     | cpuconsumptiontime: 16612 s
[2026-01-11 17:17:19] 2026-01-11 17:16:45,434 | INFO     | nevents: 50
[2026-01-11 17:17:19] 2026-01-11 17:16:45,434 | INFO     | neventsw: 0
[2026-01-11 17:17:19] 2026-01-11 17:16:45,434 | INFO     | pid: 2481582
[2026-01-11 17:17:19] 2026-01-11 17:16:45,434 | INFO     | pgrp: 2481582
[2026-01-11 17:17:19] 2026-01-11 17:16:45,434 | INFO     | corecount: 12
[2026-01-11 17:17:19] 2026-01-11 17:16:45,434 | INFO     | event service: False
[2026-01-11 17:17:19] 2026-01-11 17:16:45,435 | INFO     | sizes: {0: 2284421, 1: 2284620, 12: 2284620, 17: 2284910, 23: 2284938, 3576: 2311522, 3578: 2320562, 3579: 2320618, 3610: 2320920}
[2026-01-11 17:17:19] 2026-01-11 17:16:45,435 | INFO     | --------------------------------------------------
[2026-01-11 17:17:19] 2026-01-11 17:16:45,435 | INFO     | 
[2026-01-11 17:17:19] 2026-01-11 17:16:45,438 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2026-01-11 17:17:19] 2026-01-11 17:16:45,517 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 17:17:19] 2026-01-11 17:16:45,517 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 17:17:19] 2026-01-11 17:16:45,517 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 17:17:19] 2026-01-11 17:16:45,517 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 17:17:19] 2026-01-11 17:16:45,518 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 17:17:19] 2026-01-11 17:16:45,518 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 17:17:19] 2026-01-11 17:16:45,518 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 17:17:19] 2026-01-11 17:16:45,520 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 17:17:19] 2026-01-11 17:16:45,520 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 17:17:19] 2026-01-11 17:16:45,520 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 17:17:19] 2026-01-11 17:16:45,520 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 17:17:19] 2026-01-11 17:16:45,520 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 17:17:19] 2026-01-11 17:16:45,521 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 17:17:19] 2026-01-11 17:16:45,521 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 17:17:19] 2026-01-11 17:16:45,521 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 17:17:19] 2026-01-11 17:16:45,521 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 17:17:19] 2026-01-11 17:16:45,521 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 17:17:19] 2026-01-11 17:16:45,521 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 17:17:19] 2026-01-11 17:16:45,521 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 17:17:19] 2026-01-11 17:16:45,521 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 17:17:19] 2026-01-11 17:16:45,521 | INFO     | job 6965384211 has completed (purged errors)
[2026-01-11 17:17:19] 2026-01-11 17:16:45,522 | INFO     | overall cleanup function is called
[2026-01-11 17:17:19] 2026-01-11 17:16:46,568 | INFO     | --- collectZombieJob: --- 10, [2481582]
[2026-01-11 17:17:19] 2026-01-11 17:16:46,568 | INFO     | zombie collector waiting for pid 2481582
[2026-01-11 17:17:19] 2026-01-11 17:16:46,569 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 17:17:19] 2026-01-11 17:16:46,569 | INFO     | collected zombie processes
[2026-01-11 17:17:19] 2026-01-11 17:16:46,569 | INFO     | will attempt to kill all subprocesses of pid=2481582
[2026-01-11 17:17:19] 2026-01-11 17:16:47,992 | INFO     | process IDs to be killed: [2481582] (in reverse order)
[2026-01-11 17:17:19] 2026-01-11 17:16:48,539 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 17:17:19] 2026-01-11 17:16:48,539 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 17:17:19] 2026-01-11 17:16:48,600 | INFO     | did not find any defunct processes belonging to 2481582
[2026-01-11 17:17:19] 2026-01-11 17:16:48,638 | INFO     | did not find any defunct processes belonging to 2481582
[2026-01-11 17:17:19] 2026-01-11 17:16:48,638 | INFO     | ready for new job
[2026-01-11 17:17:19] 2026-01-11 17:16:48,639 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 17:17:19] 2026-01-11 17:16:48,644 | INFO     | ***************************************
[2026-01-11 17:17:19] 2026-01-11 17:16:48,644 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 17:17:19] 2026-01-11 17:16:48,644 | INFO     | ***************************************
[2026-01-11 17:17:19] 2026-01-11 17:16:48,644 | INFO     | 
[2026-01-11 17:17:19] 2026-01-11 17:16:48,664 | INFO     | architecture information:
[2026-01-11 17:17:19] 2026-01-11 17:16:48,667 | INFO     | executing command: cat /etc/os-release
[2026-01-11 17:17:19] 2026-01-11 17:16:48,701 | INFO     | cat /etc/os-release:
[2026-01-11 17:17:19] NAME="CentOS Linux"
[2026-01-11 17:17:19] VERSION="7 (Core)"
[2026-01-11 17:17:19] ID="centos"
[2026-01-11 17:17:19] ID_LIKE="rhel fedora"
[2026-01-11 17:17:19] VERSION_ID="7"
[2026-01-11 17:17:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 17:17:19] ANSI_COLOR="0;31"
[2026-01-11 17:17:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 17:17:19] HOME_URL="https://www.centos.org/"
[2026-01-11 17:17:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 17:17:19] 
[2026-01-11 17:17:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 17:17:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 17:17:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 17:17:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 17:17:19] 
[2026-01-11 17:17:19] 2026-01-11 17:16:48,701 | INFO     | ***************************************
[2026-01-11 17:17:19] 2026-01-11 17:16:49,204 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2026-01-11 17:17:19] 2026-01-11 17:16:49,280 | INFO     | sufficient remaining disk space (373737652224 B)
[2026-01-11 17:17:19] 2026-01-11 17:16:49,280 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 17:17:19] 2026-01-11 17:16:49,280 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 17:17:19] 2026-01-11 17:16:49,281 | INFO     | update_server=False
[2026-01-11 17:17:19] 2026-01-11 17:16:49,281 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 17:17:19] 2026-01-11 17:16:49,282 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 17:17:19] 2026-01-11 17:16:49,282 | INFO     | aborting loop
[2026-01-11 17:17:19] 2026-01-11 17:16:49,420 | INFO     | all payload control threads have been joined
[2026-01-11 17:17:19] 2026-01-11 17:16:49,729 | INFO     | all data control threads have been joined
[2026-01-11 17:17:19] 2026-01-11 17:16:50,027 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 17:17:19] 2026-01-11 17:16:50,146 | INFO     | all job control threads have been joined
[2026-01-11 17:17:19] 2026-01-11 17:16:50,287 | INFO     | [job] retrieve thread has finished
[2026-01-11 17:17:19] 2026-01-11 17:16:50,288 | INFO     | [job] job monitor thread has finished
[2026-01-11 17:17:19] 2026-01-11 17:16:50,426 | INFO     | [payload] failed_post thread has finished
[2026-01-11 17:17:19] 2026-01-11 17:16:50,428 | INFO     | [payload] control thread has finished
[2026-01-11 17:17:19] 2026-01-11 17:16:50,473 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 17:17:19] 2026-01-11 17:16:50,612 | INFO     | [data] copytool_in thread has finished
[2026-01-11 17:17:19] 2026-01-11 17:16:50,734 | INFO     | [data] control thread has finished
[2026-01-11 17:17:19] 2026-01-11 17:16:50,787 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 17:17:19] 2026-01-11 17:16:50,846 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 17:17:19] 2026-01-11 17:16:50,858 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 17:17:19] 2026-01-11 17:16:51,032 | INFO     | [job] queue monitor thread has finished
[2026-01-11 17:17:19] 2026-01-11 17:16:51,151 | INFO     | [job] control thread has finished
[2026-01-11 17:17:19] 2026-01-11 17:16:51,409 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 17:17:19] 2026-01-11 17:16:51,504 | INFO     | [job] validate thread has finished
[2026-01-11 17:17:19] 2026-01-11 17:16:51,776 | INFO     | [payload] validate_post thread has finished
[2026-01-11 17:17:19] 2026-01-11 17:16:52,793 | INFO     | [data] copytool_out thread has finished
[2026-01-11 17:17:19] 2026-01-11 17:16:55,437 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 17:17:19] 2026-01-11 17:16:59,246 | INFO     | [monitor] cgroup control has ended
[2026-01-11 17:17:19] 2026-01-11 17:17:00,331 | INFO     | job.realtimelogging is not enabled
[2026-01-11 17:17:19] 2026-01-11 17:17:01,336 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 17:17:19] 2026-01-11 17:17:02,397 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136420128855872)>', '<ExcThread(monitor, started 136419729188608)>']
[2026-01-11 17:17:19] 2026-01-11 17:17:07,422 | INFO     | all workflow threads have been joined
[2026-01-11 17:17:19] 2026-01-11 17:17:07,422 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 17:17:19] 2026-01-11 17:17:07,423 | INFO     | traces error code: 0
[2026-01-11 17:17:19] 2026-01-11 17:17:07,425 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 17:17:19] 2026-01-11 17:17:18,942 | INFO     | PID=2474267 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 17:17:19] 2026-01-11 17:17:18,943 | INFO     | .. there are 12 such processes running
[2026-01-11 17:17:19] 2026-01-11 17:17:18,943 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 17:17:19] 2026-01-11 17:17:18,944 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 17:17:19] 2026-01-11 17:17:18,944 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 17:17:19] 2026-01-11 17:17:18,944 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 17:17:19] 2026-01-11 17:17:18,944 | INFO     | [monitor] control thread has ended
[2026-01-11 17:17:19] 2026-01-11 17:17:19,358 [wrapper] ==== pilot stdout END ====
[2026-01-11 17:17:19] 2026-01-11 17:17:19,370 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 17:17:19] 2026-01-11 17:17:19,377 [wrapper] pilotpid: 2474267
[2026-01-11 17:17:19] 2026-01-11 17:17:19,384 [wrapper] Pilot exit status: 0
[2026-01-11 17:17:19] 2026-01-11 17:17:19,421 [wrapper] pandaids: 6965384211
[2026-01-11 17:17:19] 2026-01-11 17:17:19,689 [wrapper] cleanup supervisor_pilot 2586658 2474268
[2026-01-11 17:17:19] 2026-01-11 17:17:19,697 [wrapper] Test setup, not cleaning
[2026-01-11 17:17:19] 2026-01-11 17:17:19,703 [wrapper] apfmon messages muted
[2026-01-11 17:17:19] 2026-01-11 17:17:19,717 [wrapper] ==== wrapper stdout END ====
[2026-01-11 17:17:19] 2026-01-11 17:17:19,725 [wrapper] ==== wrapper stderr END ====
[2026-01-11 17:17:19]  *** Error codes and diagnostics ***
[2026-01-11 17:17:19]     "exeErrorCode": 0,
[2026-01-11 17:17:19]     "exeErrorDiag": "",
[2026-01-11 17:17:19]     "pilotErrorCode": 0,
[2026-01-11 17:17:19]     "pilotErrorDiag": "",
[2026-01-11 17:17:19]  *** Listing of results directory ***
[2026-01-11 17:17:20] total 437404
[2026-01-11 17:17:20] -rw-r--r-- 1 boinc boinc    579449 Jan 10 13:09 pilot3.tar.gz
[2026-01-11 17:17:20] -rwx------ 1 boinc boinc     36322 Jan 10 13:11 runpilot2-wrapper.sh
[2026-01-11 17:17:20] -rw-r--r-- 1 boinc boinc      5112 Jan 10 13:11 queuedata.json
[2026-01-11 17:17:20] -rw-rw-r-- 1 boinc boinc       100 Jan 11 16:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 17:17:20] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 16:15 run_atlas
[2026-01-11 17:17:20] -rw-rw-r-- 1 boinc boinc       105 Jan 11 16:15 job.xml
[2026-01-11 17:17:20] -rw-r--r-- 2 boinc boinc 393999209 Jan 11 16:15 EVNT.47962006._000095.pool.root.1
[2026-01-11 17:17:20] -rw-r--r-- 2 boinc boinc    592617 Jan 11 16:15 input.tar.gz
[2026-01-11 17:17:20] -rw-r--r-- 2 boinc boinc     15847 Jan 11 16:15 start_atlas.sh
[2026-01-11 17:17:20] drwxrwx--x 2 boinc boinc      4096 Jan 11 16:15 shared
[2026-01-11 17:17:20] -rw-rw-r-- 1 boinc boinc      7052 Jan 11 16:15 init_data.xml
[2026-01-11 17:17:20] -rw-rw-r-- 1 boinc boinc         0 Jan 11 16:15 boinc_setup_complete
[2026-01-11 17:17:20] -rw-rw-r-- 1 boinc boinc         0 Jan 11 16:15 boinc_lockfile
[2026-01-11 17:17:20] -rw-rw-r-- 1 boinc boinc      2890 Jan 11 16:15 pandaJob.out
[2026-01-11 17:17:20] -rw------- 1 boinc boinc    989556 Jan 11 16:15 agis_schedconf.cvmfs.json
[2026-01-11 17:17:20] -rw------- 1 boinc boinc   1516240 Jan 11 16:15 agis_ddmendpoints.agis.ALL.json
[2026-01-11 17:17:20] drwx------ 5 boinc boinc      4096 Jan 11 16:15 pilot3
[2026-01-11 17:17:20] -rw-rw-r-- 1 boinc boinc       530 Jan 11 17:01 boinc_task_state.xml
[2026-01-11 17:17:20] -rw------- 1 boinc boinc  45671076 Jan 11 17:15 HITS.47962010._002352.pool.root.1
[2026-01-11 17:17:20] -rw------- 1 boinc boinc      1023 Jan 11 17:16 memory_monitor_summary.json
[2026-01-11 17:17:20] -rw------- 1 boinc boinc   1616397 Jan 11 17:16 log.47962010._002352.job.log.tgz.1
[2026-01-11 17:17:20] -rw------- 1 boinc boinc      8516 Jan 11 17:16 heartbeat.json
[2026-01-11 17:17:20] -rw-rw-r-- 1 boinc boinc      8192 Jan 11 17:17 boinc_mmap_file
[2026-01-11 17:17:20] -rw-rw-r-- 1 boinc boinc        27 Jan 11 17:17 wrapper_checkpoint.txt
[2026-01-11 17:17:20] -rw------- 1 boinc boinc        95 Jan 11 17:17 pilot_heartbeat.json
[2026-01-11 17:17:20] -rw------- 1 boinc boinc       823 Jan 11 17:17 pilotlog.txt
[2026-01-11 17:17:20] -rw------- 1 boinc boinc    540214 Jan 11 17:17 log.47962010._002352.job.log.1
[2026-01-11 17:17:20] -rw------- 1 boinc boinc       353 Jan 11 17:17 output.list
[2026-01-11 17:17:20] -rw-rw-r-- 1 boinc boinc       620 Jan 11 17:17 runtime_log
[2026-01-11 17:17:20] -rw------- 1 boinc boinc   2181120 Jan 11 17:17 result.tar.gz
[2026-01-11 17:17:20] -rw------- 1 boinc boinc       652 Jan 11 17:17 tNRNDmHvny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNmmKDmp2W6Zn.diag
[2026-01-11 17:17:20] -rw-rw-r-- 1 boinc boinc      9167 Jan 11 17:17 runtime_log.err
[2026-01-11 17:17:20] -rw-rw-r-- 1 boinc boinc     22035 Jan 11 17:17 stderr.txt
[2026-01-11 17:17:20] HITS file was successfully produced:
[2026-01-11 17:17:20] -rw------- 1 boinc boinc 45671076 Jan 11 17:15 shared/HITS.pool.root.1
[2026-01-11 17:17:20]  *** Contents of shared directory: ***
[2026-01-11 17:17:20] total 432104
[2026-01-11 17:17:20] -rw-r--r-- 2 boinc boinc 393999209 Jan 11 16:15 ATLAS.root_0
[2026-01-11 17:17:20] -rw-r--r-- 2 boinc boinc    592617 Jan 11 16:15 input.tar.gz
[2026-01-11 17:17:20] -rw-r--r-- 2 boinc boinc     15847 Jan 11 16:15 start_atlas.sh
[2026-01-11 17:17:20] -rw------- 1 boinc boinc  45671076 Jan 11 17:15 HITS.pool.root.1
[2026-01-11 17:17:20] -rw------- 1 boinc boinc   2181120 Jan 11 17:17 result.tar.gz
17:17:21 (2470046): run_atlas exited; CPU time 16658.304200
17:17:21 (2470046): called boinc_finish(0)

</stderr_txt>
]]>

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