Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
15:11:07 (2346803): wrapper (7.7.26015): starting
15:11:07 (2346803): wrapper: running run_atlas (--nthreads 12)
[2026-01-11 15:11:07] Arguments: --nthreads 12
[2026-01-11 15:11:07] Threads: 12
[2026-01-11 15:11:07] Checking for CVMFS
[2026-01-11 15:11:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 15:11:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 15:11:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 15:11:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 15:11:09] 2.13.3.0 40677 3439 53004 155020 2 252 3282145 4096001 10792 130560 0 18456209 99.971 341721 270 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-11 15:11:09] CVMFS is ok
[2026-01-11 15:11:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 15:11:09] Checking for apptainer binary...
[2026-01-11 15:11:09] apptainer is not installed, using version from CVMFS
[2026-01-11 15:11:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 15:11:11] epyc7v12
[2026-01-11 15:11:11] apptainer works
[2026-01-11 15:11:11] Set ATHENA_PROC_NUMBER=12
[2026-01-11 15:11:11] Set ATHENA_CORE_NUMBER=12
[2026-01-11 15:11:11] Starting ATLAS job with PandaID=6965383917
[2026-01-11 15:11:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 16:15:01]  *** The last 200 lines of the pilot log: ***
[2026-01-11 16:15:01] 2026-01-11 16:13:44,339 | INFO     |  -- lfn=log.47962010._002058.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 16:15:01] 2026-01-11 16:13:44,339 | INFO     | stage-out finished correctly
[2026-01-11 16:15:01] 2026-01-11 16:13:45,266 | INFO     | monitor loop #251: job 0:6965383917 is in state 'finished'
[2026-01-11 16:15:01] 2026-01-11 16:13:45,267 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 16:15:01] 2026-01-11 16:13:46,209 | INFO     | time since job start (3718s) is within the limit (349056.0s)
[2026-01-11 16:15:01] 2026-01-11 16:13:46,729 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 16:15:01] 2026-01-11 16:13:46,957 | INFO     | job 6965383917 has state=finished
[2026-01-11 16:15:01] 2026-01-11 16:13:46,957 | INFO     | preparing for final server update for job 6965383917 in state='finished'
[2026-01-11 16:15:01] 2026-01-11 16:13:46,958 | INFO     | this job has now completed (state=finished)
[2026-01-11 16:15:01] 2026-01-11 16:13:46,958 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 16:15:01] 2026-01-11 16:13:46,958 | INFO     | log transfer has been attempted: DONE
[2026-01-11 16:15:01] 2026-01-11 16:13:46,958 | INFO     | job 6965383917 has finished - writing final server update
[2026-01-11 16:15:01] 2026-01-11 16:13:46,959 | INFO     | total number of processed events: 50 (read)
[2026-01-11 16:15:01] 2026-01-11 16:13:46,959 | INFO     | executing command: lscpu
[2026-01-11 16:15:01] 2026-01-11 16:13:47,139 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 16:15:01] 2026-01-11 16:13:47,770 | INFO     | monitor loop #252: job 0:6965383917 is in state 'finished'
[2026-01-11 16:15:01] 2026-01-11 16:13:47,770 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 16:15:01] 2026-01-11 16:13:48,216 | INFO     | time since job start (3720s) is within the limit (349056.0s)
[2026-01-11 16:15:01] 2026-01-11 16:13:50,223 | INFO     | time since job start (3722s) is within the limit (349056.0s)
[2026-01-11 16:15:01] 2026-01-11 16:13:50,276 | INFO     | monitor loop #253: job 0:6965383917 is in state 'finished'
[2026-01-11 16:15:01] 2026-01-11 16:13:50,276 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 16:15:01] 2026-01-11 16:13:52,228 | INFO     | time since job start (3724s) is within the limit (349056.0s)
[2026-01-11 16:15:01] 2026-01-11 16:13:52,779 | INFO     | monitor loop #254: job 0:6965383917 is in state 'finished'
[2026-01-11 16:15:01] 2026-01-11 16:13:52,779 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 16:15:01] 2026-01-11 16:13:54,238 | INFO     | time since job start (3726s) is within the limit (349056.0s)
[2026-01-11 16:15:01] 2026-01-11 16:13:55,286 | INFO     | monitor loop #255: job 0:6965383917 is in state 'finished'
[2026-01-11 16:15:01] 2026-01-11 16:13:55,286 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 16:15:01] 2026-01-11 16:13:56,243 | INFO     | time since job start (3728s) is within the limit (349056.0s)
[2026-01-11 16:15:01] 2026-01-11 16:13:57,789 | INFO     | monitor loop #256: job 0:6965383917 is in state 'finished'
[2026-01-11 16:15:01] 2026-01-11 16:13:57,789 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 16:15:01] 2026-01-11 16:13:58,248 | INFO     | time since job start (3730s) is within the limit (349056.0s)
[2026-01-11 16:15:01] 2026-01-11 16:14:00,298 | INFO     | monitor loop #257: job 0:6965383917 is in state 'finished'
[2026-01-11 16:15:01] 2026-01-11 16:14:00,298 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 16:15:01] 2026-01-11 16:14:00,927 | INFO     | PID=2351031 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-11 16:15:01] 2026-01-11 16:14:00,929 | INFO     | .. there are 12 such processes running
[2026-01-11 16:15:01] 2026-01-11 16:14:01,933 | INFO     | time since job start (3733s) is within the limit (349056.0s)
[2026-01-11 16:15:01] 2026-01-11 16:14:02,808 | INFO     | monitor loop #258: job 0:6965383917 is in state 'finished'
[2026-01-11 16:15:01] 2026-01-11 16:14:02,808 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 16:15:01] 2026-01-11 16:14:03,350 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 16:15:01] 2026-01-11 16:14:03,390 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2523.8801015625004
[2026-01-11 16:15:01] 2026-01-11 16:14:03,417 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6965383917/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 16:15:01] 2026-01-11 16:14:03,418 | INFO     | extracted standard info from prmon json
[2026-01-11 16:15:01] 2026-01-11 16:14:03,418 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 16:15:01] 2026-01-11 16:14:03,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 16:15:01] 2026-01-11 16:14:03,421 | INFO     | fitting pss+swap vs Time
[2026-01-11 16:15:01] 2026-01-11 16:14:03,421 | INFO     | sum of square deviations: 46095191.54716989
[2026-01-11 16:15:01] 2026-01-11 16:14:03,421 | INFO     | sum of deviations: -10227433471.509434
[2026-01-11 16:15:01] 2026-01-11 16:14:03,421 | INFO     | mean x: 1768146275.6792452
[2026-01-11 16:15:01] 2026-01-11 16:14:03,421 | INFO     | mean y: 2629481.2641509436
[2026-01-11 16:15:01] 2026-01-11 16:14:03,422 | INFO     | intersect: 392312495118.7992
[2026-01-11 16:15:01] 2026-01-11 16:14:03,422 | INFO     | chi2: 3.488897485466869
[2026-01-11 16:15:01] 2026-01-11 16:14:03,422 | INFO     | current memory leak: -221.88 B/s (using 53 data points, chi2=3.49)
[2026-01-11 16:15:01] 2026-01-11 16:14:03,422 | INFO     | could have reported an average CPU frequency of 2513 MHz (6 samples)
[2026-01-11 16:15:01] 2026-01-11 16:14:03,422 | INFO     | ..............................
[2026-01-11 16:15:01] 2026-01-11 16:14:03,423 | INFO     | . Timing measurements:
[2026-01-11 16:15:01] 2026-01-11 16:14:03,423 | INFO     | . get job = 0 s
[2026-01-11 16:15:01] 2026-01-11 16:14:03,423 | INFO     | . initial setup = 3 s
[2026-01-11 16:15:01] 2026-01-11 16:14:03,423 | INFO     | . payload setup = 21 s
[2026-01-11 16:15:01] 2026-01-11 16:14:03,423 | INFO     | . stage-in = 0 s
[2026-01-11 16:15:01] 2026-01-11 16:14:03,423 | INFO     | . payload execution = 3649 s
[2026-01-11 16:15:01] 2026-01-11 16:14:03,423 | INFO     | . stage-out = 2 s
[2026-01-11 16:15:01] 2026-01-11 16:14:03,423 | INFO     | . log creation = 0 s
[2026-01-11 16:15:01] 2026-01-11 16:14:03,423 | INFO     | ..............................
[2026-01-11 16:15:01] 2026-01-11 16:14:03,826 | INFO     | 
[2026-01-11 16:15:01] 2026-01-11 16:14:03,826 | INFO     | job summary report
[2026-01-11 16:15:01] 2026-01-11 16:14:03,826 | INFO     | --------------------------------------------------
[2026-01-11 16:15:01] 2026-01-11 16:14:03,827 | INFO     | PanDA job id: 6965383917
[2026-01-11 16:15:01] 2026-01-11 16:14:03,827 | INFO     | task id: 47962010
[2026-01-11 16:15:01] 2026-01-11 16:14:03,827 | INFO     | errors: (none)
[2026-01-11 16:15:01] 2026-01-11 16:14:03,827 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 16:15:01] 2026-01-11 16:14:03,827 | INFO     | pilot state: finished 
[2026-01-11 16:15:01] 2026-01-11 16:14:03,827 | INFO     | transexitcode: 0
[2026-01-11 16:15:01] 2026-01-11 16:14:03,827 | INFO     | exeerrorcode: 0
[2026-01-11 16:15:01] 2026-01-11 16:14:03,827 | INFO     | exeerrordiag: 
[2026-01-11 16:15:01] 2026-01-11 16:14:03,827 | INFO     | exitcode: 0
[2026-01-11 16:15:01] 2026-01-11 16:14:03,827 | INFO     | exitmsg: OK
[2026-01-11 16:15:01] 2026-01-11 16:14:03,827 | INFO     | cpuconsumptiontime: 16630 s
[2026-01-11 16:15:01] 2026-01-11 16:14:03,827 | INFO     | nevents: 50
[2026-01-11 16:15:01] 2026-01-11 16:14:03,828 | INFO     | neventsw: 0
[2026-01-11 16:15:01] 2026-01-11 16:14:03,828 | INFO     | pid: 2358350
[2026-01-11 16:15:01] 2026-01-11 16:14:03,828 | INFO     | pgrp: 2358350
[2026-01-11 16:15:01] 2026-01-11 16:14:03,828 | INFO     | corecount: 12
[2026-01-11 16:15:01] 2026-01-11 16:14:03,829 | INFO     | event service: False
[2026-01-11 16:15:01] 2026-01-11 16:14:03,829 | INFO     | sizes: {0: 2284415, 1: 2284614, 12: 2284614, 17: 2284904, 23: 2284932, 3675: 2311625, 3678: 2320665, 3680: 2320721, 3697: 2320967}
[2026-01-11 16:15:01] 2026-01-11 16:14:03,829 | INFO     | --------------------------------------------------
[2026-01-11 16:15:01] 2026-01-11 16:14:03,829 | INFO     | 
[2026-01-11 16:15:01] 2026-01-11 16:14:03,830 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2026-01-11 16:15:01] 2026-01-11 16:14:03,906 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 16:15:01] 2026-01-11 16:14:03,906 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 16:15:01] 2026-01-11 16:14:03,906 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 16:15:01] 2026-01-11 16:14:03,907 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 16:15:01] 2026-01-11 16:14:03,907 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 16:15:01] 2026-01-11 16:14:03,907 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 16:15:01] 2026-01-11 16:14:03,907 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 16:15:01] 2026-01-11 16:14:03,908 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 16:15:01] 2026-01-11 16:14:03,908 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 16:15:01] 2026-01-11 16:14:03,908 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 16:15:01] 2026-01-11 16:14:03,908 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 16:15:01] 2026-01-11 16:14:03,908 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 16:15:01] 2026-01-11 16:14:03,908 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 16:15:01] 2026-01-11 16:14:03,908 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 16:15:01] 2026-01-11 16:14:03,909 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 16:15:01] 2026-01-11 16:14:03,909 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 16:15:01] 2026-01-11 16:14:03,909 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 16:15:01] 2026-01-11 16:14:03,909 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 16:15:01] 2026-01-11 16:14:03,909 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 16:15:01] 2026-01-11 16:14:03,909 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 16:15:01] 2026-01-11 16:14:03,909 | INFO     | job 6965383917 has completed (purged errors)
[2026-01-11 16:15:01] 2026-01-11 16:14:03,909 | INFO     | overall cleanup function is called
[2026-01-11 16:15:01] 2026-01-11 16:14:04,959 | INFO     | --- collectZombieJob: --- 10, [2358350]
[2026-01-11 16:15:01] 2026-01-11 16:14:04,959 | INFO     | zombie collector waiting for pid 2358350
[2026-01-11 16:15:01] 2026-01-11 16:14:04,960 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 16:15:01] 2026-01-11 16:14:04,960 | INFO     | collected zombie processes
[2026-01-11 16:15:01] 2026-01-11 16:14:04,960 | INFO     | will attempt to kill all subprocesses of pid=2358350
[2026-01-11 16:15:01] 2026-01-11 16:14:06,228 | INFO     | process IDs to be killed: [2358350] (in reverse order)
[2026-01-11 16:15:01] 2026-01-11 16:14:06,869 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 16:15:01] 2026-01-11 16:14:06,872 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 16:15:01] 2026-01-11 16:14:06,925 | INFO     | did not find any defunct processes belonging to 2358350
[2026-01-11 16:15:01] 2026-01-11 16:14:06,974 | INFO     | did not find any defunct processes belonging to 2358350
[2026-01-11 16:15:01] 2026-01-11 16:14:06,977 | INFO     | ready for new job
[2026-01-11 16:15:01] 2026-01-11 16:14:06,977 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 16:15:01] 2026-01-11 16:14:06,981 | INFO     | ***************************************
[2026-01-11 16:15:01] 2026-01-11 16:14:06,981 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 16:15:01] 2026-01-11 16:14:06,982 | INFO     | ***************************************
[2026-01-11 16:15:01] 2026-01-11 16:14:06,982 | INFO     | 
[2026-01-11 16:15:01] 2026-01-11 16:14:07,001 | INFO     | architecture information:
[2026-01-11 16:15:01] 2026-01-11 16:14:07,014 | INFO     | executing command: cat /etc/os-release
[2026-01-11 16:15:01] 2026-01-11 16:14:07,073 | INFO     | cat /etc/os-release:
[2026-01-11 16:15:01] NAME="CentOS Linux"
[2026-01-11 16:15:01] VERSION="7 (Core)"
[2026-01-11 16:15:01] ID="centos"
[2026-01-11 16:15:01] ID_LIKE="rhel fedora"
[2026-01-11 16:15:01] VERSION_ID="7"
[2026-01-11 16:15:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 16:15:01] ANSI_COLOR="0;31"
[2026-01-11 16:15:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 16:15:01] HOME_URL="https://www.centos.org/"
[2026-01-11 16:15:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 16:15:01] 
[2026-01-11 16:15:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 16:15:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 16:15:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 16:15:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 16:15:01] 
[2026-01-11 16:15:01] 2026-01-11 16:14:07,074 | INFO     | ***************************************
[2026-01-11 16:15:01] 2026-01-11 16:14:07,580 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2026-01-11 16:15:01] 2026-01-11 16:14:07,651 | INFO     | sufficient remaining disk space (373304590336 B)
[2026-01-11 16:15:01] 2026-01-11 16:14:07,653 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 16:15:01] 2026-01-11 16:14:07,653 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 16:15:01] 2026-01-11 16:14:07,653 | INFO     | update_server=False
[2026-01-11 16:15:01] 2026-01-11 16:14:07,654 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 16:15:01] 2026-01-11 16:14:07,654 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 16:15:01] 2026-01-11 16:14:07,828 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 16:15:01] 2026-01-11 16:14:07,829 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 16:15:01] 2026-01-11 16:14:07,832 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 16:15:01] 2026-01-11 16:14:07,832 | INFO     | will abort loop
[2026-01-11 16:15:01] 2026-01-11 16:14:08,343 | INFO     | all data control threads have been joined
[2026-01-11 16:15:01] 2026-01-11 16:14:08,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 16:15:01] 2026-01-11 16:14:08,659 | INFO     | [job] retrieve thread has finished
[2026-01-11 16:15:01] 2026-01-11 16:14:08,753 | INFO     | all payload control threads have been joined
[2026-01-11 16:15:01] 2026-01-11 16:14:08,841 | INFO     | [job] validate thread has finished
[2026-01-11 16:15:01] 2026-01-11 16:14:08,843 | INFO     | [job] job monitor thread has finished
[2026-01-11 16:15:01] 2026-01-11 16:14:08,880 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 16:15:01] 2026-01-11 16:14:09,056 | INFO     | [payload] failed_post thread has finished
[2026-01-11 16:15:01] 2026-01-11 16:14:09,242 | INFO     | all job control threads have been joined
[2026-01-11 16:15:01] 2026-01-11 16:14:09,300 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 16:15:01] 2026-01-11 16:14:09,348 | INFO     | [data] control thread has finished
[2026-01-11 16:15:01] 2026-01-11 16:14:09,408 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 16:15:01] 2026-01-11 16:14:09,621 | INFO     | [job] queue monitor thread has finished
[2026-01-11 16:15:01] 2026-01-11 16:14:09,659 | INFO     | [data] copytool_out thread has finished
[2026-01-11 16:15:01] 2026-01-11 16:14:09,759 | INFO     | [payload] control thread has finished
[2026-01-11 16:15:01] 2026-01-11 16:14:09,841 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 16:15:01] 2026-01-11 16:14:09,842 | INFO     | [data] copytool_in thread has finished
[2026-01-11 16:15:01] 2026-01-11 16:14:09,989 | INFO     | [payload] validate_post thread has finished
[2026-01-11 16:15:01] 2026-01-11 16:14:10,250 | INFO     | [job] control thread has finished
[2026-01-11 16:15:01] 2026-01-11 16:14:11,001 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 16:15:01] 2026-01-11 16:14:15,010 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 16:15:01] 2026-01-11 16:14:36,519 | INFO     | PID=2351031 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 16:15:01] 2026-01-11 16:14:36,519 | INFO     | .. there are 12 such processes running
[2026-01-11 16:15:01] 2026-01-11 16:14:36,520 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 16:15:01] 2026-01-11 16:14:36,520 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 16:15:01] 2026-01-11 16:14:36,520 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 16:15:01] 2026-01-11 16:14:53,870 | INFO     | [monitor] cgroup control has ended
[2026-01-11 16:15:01] 2026-01-11 16:14:54,772 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126159084115776)>', '<ExcThread(monitor, started 126158557411072)>']
[2026-01-11 16:15:01] 2026-01-11 16:14:55,694 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 16:15:01] 2026-01-11 16:14:55,694 | INFO     | [monitor] control thread has ended
[2026-01-11 16:15:01] 2026-01-11 16:14:59,797 | INFO     | all workflow threads have been joined
[2026-01-11 16:15:01] 2026-01-11 16:14:59,797 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 16:15:01] 2026-01-11 16:14:59,798 | INFO     | traces error code: 0
[2026-01-11 16:15:01] 2026-01-11 16:14:59,798 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 16:15:01] 2026-01-11 16:15:00,515 [wrapper] ==== pilot stdout END ====
[2026-01-11 16:15:01] 2026-01-11 16:15:00,525 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 16:15:01] 2026-01-11 16:15:00,550 [wrapper] pilotpid: 2351031
[2026-01-11 16:15:01] 2026-01-11 16:15:00,561 [wrapper] Pilot exit status: 0
[2026-01-11 16:15:01] 2026-01-11 16:15:00,622 [wrapper] pandaids: 6965383917
[2026-01-11 16:15:01] 2026-01-11 16:15:00,825 [wrapper] cleanup supervisor_pilot 2465137 2351032
[2026-01-11 16:15:01] 2026-01-11 16:15:00,845 [wrapper] Test setup, not cleaning
[2026-01-11 16:15:01] 2026-01-11 16:15:00,861 [wrapper] apfmon messages muted
[2026-01-11 16:15:01] 2026-01-11 16:15:00,880 [wrapper] ==== wrapper stdout END ====
[2026-01-11 16:15:01] 2026-01-11 16:15:00,901 [wrapper] ==== wrapper stderr END ====
[2026-01-11 16:15:01]  *** Error codes and diagnostics ***
[2026-01-11 16:15:01]     "exeErrorCode": 0,
[2026-01-11 16:15:01]     "exeErrorDiag": "",
[2026-01-11 16:15:01]     "pilotErrorCode": 0,
[2026-01-11 16:15:01]     "pilotErrorDiag": "",
[2026-01-11 16:15:01]  *** Listing of results directory ***
[2026-01-11 16:15:01] total 433500
[2026-01-11 16:15:01] -rw-r--r-- 1 boinc boinc    579449 Jan 10 13:09 pilot3.tar.gz
[2026-01-11 16:15:01] -rwx------ 1 boinc boinc     36322 Jan 10 13:11 runpilot2-wrapper.sh
[2026-01-11 16:15:01] -rw-r--r-- 1 boinc boinc      5112 Jan 10 13:11 queuedata.json
[2026-01-11 16:15:01] -rw-rw-r-- 1 boinc boinc       100 Jan 11 15:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 16:15:01] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 15:11 run_atlas
[2026-01-11 16:15:01] -rw-rw-r-- 1 boinc boinc       105 Jan 11 15:11 job.xml
[2026-01-11 16:15:01] -rw-r--r-- 2 boinc boinc 389443902 Jan 11 15:11 EVNT.47962006._000051.pool.root.1
[2026-01-11 16:15:01] -rw-r--r-- 2 boinc boinc     15847 Jan 11 15:11 start_atlas.sh
[2026-01-11 16:15:01] drwxrwx--x 2 boinc boinc      4096 Jan 11 15:11 shared
[2026-01-11 16:15:01] -rw-r--r-- 2 boinc boinc    592611 Jan 11 15:11 input.tar.gz
[2026-01-11 16:15:01] -rw-rw-r-- 1 boinc boinc      7052 Jan 11 15:11 init_data.xml
[2026-01-11 16:15:01] -rw-rw-r-- 1 boinc boinc         0 Jan 11 15:11 boinc_setup_complete
[2026-01-11 16:15:01] -rw-rw-r-- 1 boinc boinc         0 Jan 11 15:11 boinc_lockfile
[2026-01-11 16:15:01] -rw-rw-r-- 1 boinc boinc      2887 Jan 11 15:11 pandaJob.out
[2026-01-11 16:15:01] -rw------- 1 boinc boinc    989556 Jan 11 15:11 agis_schedconf.cvmfs.json
[2026-01-11 16:15:01] -rw------- 1 boinc boinc   1516240 Jan 11 15:11 agis_ddmendpoints.agis.ALL.json
[2026-01-11 16:15:01] drwx------ 5 boinc boinc      4096 Jan 11 15:11 pilot3
[2026-01-11 16:15:01] -rw-rw-r-- 1 boinc boinc       529 Jan 11 15:58 boinc_task_state.xml
[2026-01-11 16:15:01] -rw------- 1 boinc boinc  46197500 Jan 11 16:13 HITS.47962010._002058.pool.root.1
[2026-01-11 16:15:01] -rw------- 1 boinc boinc      1021 Jan 11 16:13 memory_monitor_summary.json
[2026-01-11 16:15:01] -rw------- 1 boinc boinc   1619376 Jan 11 16:13 log.47962010._002058.job.log.tgz.1
[2026-01-11 16:15:01] -rw------- 1 boinc boinc      8517 Jan 11 16:14 heartbeat.json
[2026-01-11 16:15:01] -rw------- 1 boinc boinc        95 Jan 11 16:14 pilot_heartbeat.json
[2026-01-11 16:15:01] -rw------- 1 boinc boinc      5034 Jan 11 16:14 pilotlog.txt
[2026-01-11 16:15:01] -rw-rw-r-- 1 boinc boinc        27 Jan 11 16:15 wrapper_checkpoint.txt
[2026-01-11 16:15:01] -rw-rw-r-- 1 boinc boinc      8192 Jan 11 16:15 boinc_mmap_file
[2026-01-11 16:15:01] -rw------- 1 boinc boinc    553089 Jan 11 16:15 log.47962010._002058.job.log.1
[2026-01-11 16:15:01] -rw------- 1 boinc boinc       353 Jan 11 16:15 output.list
[2026-01-11 16:15:01] -rw-rw-r-- 1 boinc boinc       620 Jan 11 16:15 runtime_log
[2026-01-11 16:15:01] -rw------- 1 boinc boinc   2191360 Jan 11 16:15 result.tar.gz
[2026-01-11 16:15:01] -rw------- 1 boinc boinc       651 Jan 11 16:15 ww6MDmHvny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6lmKDmzXNOin.diag
[2026-01-11 16:15:01] -rw-rw-r-- 1 boinc boinc      9167 Jan 11 16:15 runtime_log.err
[2026-01-11 16:15:01] -rw-rw-r-- 1 boinc boinc     22182 Jan 11 16:15 stderr.txt
[2026-01-11 16:15:01] HITS file was successfully produced:
[2026-01-11 16:15:01] -rw------- 1 boinc boinc 46197500 Jan 11 16:13 shared/HITS.pool.root.1
[2026-01-11 16:15:01]  *** Contents of shared directory: ***
[2026-01-11 16:15:01] total 428176
[2026-01-11 16:15:01] -rw-r--r-- 2 boinc boinc 389443902 Jan 11 15:11 ATLAS.root_0
[2026-01-11 16:15:01] -rw-r--r-- 2 boinc boinc     15847 Jan 11 15:11 start_atlas.sh
[2026-01-11 16:15:01] -rw-r--r-- 2 boinc boinc    592611 Jan 11 15:11 input.tar.gz
[2026-01-11 16:15:01] -rw------- 1 boinc boinc  46197500 Jan 11 16:13 HITS.pool.root.1
[2026-01-11 16:15:01] -rw------- 1 boinc boinc   2191360 Jan 11 16:15 result.tar.gz
16:15:02 (2346803): run_atlas exited; CPU time 16679.129444
16:15:02 (2346803): called boinc_finish(0)

</stderr_txt>
]]>

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