Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:21:49 (20651): wrapper (7.7.26015): starting
18:21:49 (20651): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 18:21:49] Arguments: --nthreads 8
[2026-01-10 18:21:49] Threads: 8
[2026-01-10 18:21:49] Checking for CVMFS
[2026-01-10 18:21:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:21:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:21:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:21:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:21:51] 2.11.2.0 28634 37148 99220 154987 1 60 16444833 25165825 899 130560 0 8198580 99.680 10394782 2577 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 18:21:51] CVMFS is ok
[2026-01-10 18:21:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:21:51] Checking for apptainer binary...
[2026-01-10 18:21:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:21:51] Running /usr/bin/apptainer --version
[2026-01-10 18:21:52] apptainer version 1.3.2-1.el7
[2026-01-10 18:21:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:22:01] cg-vwn465.simple-grid.lan
[2026-01-10 18:22:01] apptainer works
[2026-01-10 18:22:01] Set ATHENA_PROC_NUMBER=8
[2026-01-10 18:22:01] Set ATHENA_CORE_NUMBER=8
[2026-01-10 18:22:01] Starting ATLAS job with PandaID=6965382784
[2026-01-10 18:22:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 23:51:06]  *** The last 200 lines of the pilot log: ***
[2026-01-10 23:51:06] 2026-01-10 22:50:06,675 | INFO     | time since job start (19424s) is within the limit (349056.0s)
[2026-01-10 23:51:06] 2026-01-10 22:50:06,999 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 23:51:06] 2026-01-10 22:50:07,000 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2026-01-10 23:51:06] 2026-01-10 22:50:07,002 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6965382784/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 23:51:06] 2026-01-10 22:50:07,002 | INFO     | extracted standard info from prmon json
[2026-01-10 23:51:06] 2026-01-10 22:50:07,002 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 23:51:06] 2026-01-10 22:50:07,003 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 23:51:06] 2026-01-10 22:50:07,003 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 23:51:06] 2026-01-10 22:50:07,003 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 23:51:06] 2026-01-10 22:50:07,009 | INFO     | fitting pss+swap vs Time
[2026-01-10 23:51:06] 2026-01-10 22:50:07,009 | INFO     | sum of square deviations: 9059954057.0
[2026-01-10 23:51:06] 2026-01-10 22:50:07,012 | INFO     | sum of deviations: 113778709231.50005
[2026-01-10 23:51:06] 2026-01-10 22:50:07,013 | INFO     | mean x: 1768075865.5
[2026-01-10 23:51:06] 2026-01-10 22:50:07,013 | INFO     | mean y: 2457364.724025974
[2026-01-10 23:51:06] 2026-01-10 22:50:07,013 | INFO     | intersect: -22201782141.824863
[2026-01-10 23:51:06] 2026-01-10 22:50:07,013 | INFO     | chi2: 7.464552855753498
[2026-01-10 23:51:06] 2026-01-10 22:50:07,014 | INFO     | sum of square deviations: 8625843592.0
[2026-01-10 23:51:06] 2026-01-10 22:50:07,017 | INFO     | sum of deviations: 132292272519.00002
[2026-01-10 23:51:06] 2026-01-10 22:50:07,017 | INFO     | mean x: 1768075713.0
[2026-01-10 23:51:06] 2026-01-10 22:50:07,017 | INFO     | mean y: 2463773.8481848184
[2026-01-10 23:51:06] 2026-01-10 22:50:07,017 | INFO     | intersect: -27114043911.88742
[2026-01-10 23:51:06] 2026-01-10 22:50:07,018 | INFO     | chi2: 6.7456244572085
[2026-01-10 23:51:06] 2026-01-10 22:50:07,018 | INFO     | current chi2=6.7456244572085 (change=9.631231936295624 %)
[2026-01-10 23:51:06] 2026-01-10 22:50:07,018 | INFO     | right removable region: 302
[2026-01-10 23:51:06] 2026-01-10 22:50:07,018 | INFO     | sum of square deviations: 8625843592.0
[2026-01-10 23:51:06] 2026-01-10 22:50:07,028 | INFO     | sum of deviations: 10421559579.000004
[2026-01-10 23:51:06] 2026-01-10 22:50:07,029 | INFO     | mean x: 1768076018.0
[2026-01-10 23:51:06] 2026-01-10 22:50:07,029 | INFO     | mean y: 2493647.293729373
[2026-01-10 23:51:06] 2026-01-10 22:50:07,029 | INFO     | intersect: -2133657949.389208
[2026-01-10 23:51:06] 2026-01-10 22:50:07,029 | INFO     | chi2: 3.0058886678488212
[2026-01-10 23:51:06] 2026-01-10 22:50:07,029 | INFO     | current chi2=3.0058886678488212 (change=59.73116238929228 %)
[2026-01-10 23:51:06] 2026-01-10 22:50:07,030 | INFO     | sum of square deviations: 8205826414.5
[2026-01-10 23:51:06] 2026-01-10 22:50:07,033 | INFO     | sum of deviations: -56411654877.50001
[2026-01-10 23:51:06] 2026-01-10 22:50:07,033 | INFO     | mean x: 1768076170.5
[2026-01-10 23:51:06] 2026-01-10 22:50:07,033 | INFO     | mean y: 2517839.2382550337
[2026-01-10 23:51:06] 2026-01-10 22:50:07,033 | INFO     | intersect: 12157308556.128561
[2026-01-10 23:51:06] 2026-01-10 22:50:07,034 | INFO     | chi2: 1.029450298550394
[2026-01-10 23:51:06] 2026-01-10 22:50:07,034 | INFO     | current chi2=1.029450298550394 (change=65.75221465913023 %)
[2026-01-10 23:51:06] 2026-01-10 22:50:07,034 | INFO     | sum of square deviations: 7799669962.0
[2026-01-10 23:51:06] 2026-01-10 22:50:07,037 | INFO     | sum of deviations: -63304033195.99999
[2026-01-10 23:51:06] 2026-01-10 22:50:07,037 | INFO     | mean x: 1768076323.0
[2026-01-10 23:51:06] 2026-01-10 22:50:07,037 | INFO     | mean y: 2520415.2252559727
[2026-01-10 23:51:06] 2026-01-10 22:50:07,037 | INFO     | intersect: 14352661227.536411
[2026-01-10 23:51:06] 2026-01-10 22:50:07,038 | INFO     | chi2: 0.9885481688584606
[2026-01-10 23:51:06] 2026-01-10 22:50:07,038 | INFO     | current chi2=0.9885481688584606 (change=3.9732010131551823 %)
[2026-01-10 23:51:06] 2026-01-10 22:50:07,038 | INFO     | left removable region: 30
[2026-01-10 23:51:06] 2026-01-10 22:50:07,038 | INFO     | sum of square deviations: 6239923508.0
[2026-01-10 23:51:06] 2026-01-10 22:50:07,041 | INFO     | sum of deviations: -14520678357.5
[2026-01-10 23:51:06] 2026-01-10 22:50:07,041 | INFO     | mean x: 1768076597.5
[2026-01-10 23:51:06] 2026-01-10 22:50:07,041 | INFO     | mean y: 2516421.908088235
[2026-01-10 23:51:06] 2026-01-10 22:50:07,041 | INFO     | intersect: 4116937303.9597864
[2026-01-10 23:51:06] 2026-01-10 22:50:07,042 | INFO     | chi2: 0.12588714908622795
[2026-01-10 23:51:06] 2026-01-10 22:50:07,042 | INFO     | current memory leak: -2.33 B/s (using 272 data points, chi2=0.13)
[2026-01-10 23:51:06] 2026-01-10 22:50:07,043 | INFO     | could have reported an average CPU frequency of 2250 MHz (13 samples)
[2026-01-10 23:51:06] 2026-01-10 22:50:07,043 | INFO     | ..............................
[2026-01-10 23:51:06] 2026-01-10 22:50:07,043 | INFO     | . Timing measurements:
[2026-01-10 23:51:06] 2026-01-10 22:50:07,043 | INFO     | . get job = 0 s
[2026-01-10 23:51:06] 2026-01-10 22:50:07,043 | INFO     | . initial setup = 12 s
[2026-01-10 23:51:06] 2026-01-10 22:50:07,043 | INFO     | . payload setup = 132 s
[2026-01-10 23:51:06] 2026-01-10 22:50:07,043 | INFO     | . stage-in = 0 s
[2026-01-10 23:51:06] 2026-01-10 22:50:07,044 | INFO     | . payload execution = 18938 s
[2026-01-10 23:51:06] 2026-01-10 22:50:07,044 | INFO     | . stage-out = 13 s
[2026-01-10 23:51:06] 2026-01-10 22:50:07,044 | INFO     | . log creation = 1 s
[2026-01-10 23:51:06] 2026-01-10 22:50:07,044 | INFO     | ..............................
[2026-01-10 23:51:06] 2026-01-10 22:50:07,722 | INFO     | 
[2026-01-10 23:51:06] 2026-01-10 22:50:07,722 | INFO     | job summary report
[2026-01-10 23:51:06] 2026-01-10 22:50:07,722 | INFO     | --------------------------------------------------
[2026-01-10 23:51:06] 2026-01-10 22:50:07,722 | INFO     | PanDA job id: 6965382784
[2026-01-10 23:51:06] 2026-01-10 22:50:07,722 | INFO     | task id: 47898826
[2026-01-10 23:51:06] 2026-01-10 22:50:07,722 | INFO     | errors: (none)
[2026-01-10 23:51:06] 2026-01-10 22:50:07,722 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 23:51:06] 2026-01-10 22:50:07,723 | INFO     | pilot state: finished 
[2026-01-10 23:51:06] 2026-01-10 22:50:07,723 | INFO     | transexitcode: 0
[2026-01-10 23:51:06] 2026-01-10 22:50:07,723 | INFO     | exeerrorcode: 0
[2026-01-10 23:51:06] 2026-01-10 22:50:07,723 | INFO     | exeerrordiag: 
[2026-01-10 23:51:06] 2026-01-10 22:50:07,723 | INFO     | exitcode: 0
[2026-01-10 23:51:06] 2026-01-10 22:50:07,723 | INFO     | exitmsg: OK
[2026-01-10 23:51:06] 2026-01-10 22:50:07,723 | INFO     | cpuconsumptiontime: 71035 s
[2026-01-10 23:51:06] 2026-01-10 22:50:07,723 | INFO     | nevents: 400
[2026-01-10 23:51:06] 2026-01-10 22:50:07,723 | INFO     | neventsw: 0
[2026-01-10 23:51:06] 2026-01-10 22:50:07,723 | INFO     | pid: 30881
[2026-01-10 23:51:06] 2026-01-10 22:50:07,723 | INFO     | pgrp: 30881
[2026-01-10 23:51:06] 2026-01-10 22:50:07,724 | INFO     | corecount: 8
[2026-01-10 23:51:06] 2026-01-10 22:50:07,724 | INFO     | event service: False
[2026-01-10 23:51:06] 2026-01-10 22:50:07,724 | INFO     | sizes: {0: 2283693, 1: 2283948, 12: 2283948, 23: 2283976, 33: 2284004, 44: 2284060, 55: 2284216, 66: 2284244, 76: 2284272, 87: 2284328, 98: 2284356, 105: 2284926, 
[2026-01-10 23:51:06] 2026-01-10 22:50:07,724 | INFO     | --------------------------------------------------
[2026-01-10 23:51:06] 2026-01-10 22:50:07,724 | INFO     | 
[2026-01-10 23:51:06] 2026-01-10 22:50:07,724 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-10 23:51:06] 2026-01-10 22:50:08,265 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 23:51:06] 2026-01-10 22:50:08,265 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 23:51:06] 2026-01-10 22:50:08,266 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 23:51:06] 2026-01-10 22:50:08,266 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 23:51:06] 2026-01-10 22:50:08,266 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 23:51:06] 2026-01-10 22:50:08,266 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 23:51:06] 2026-01-10 22:50:08,266 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 23:51:06] 2026-01-10 22:50:08,266 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 23:51:06] 2026-01-10 22:50:08,266 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 23:51:06] 2026-01-10 22:50:08,266 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 23:51:06] 2026-01-10 22:50:08,266 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 23:51:06] 2026-01-10 22:50:08,266 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 23:51:06] 2026-01-10 22:50:08,266 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 23:51:06] 2026-01-10 22:50:08,267 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 23:51:06] 2026-01-10 22:50:08,267 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 23:51:06] 2026-01-10 22:50:08,267 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 23:51:06] 2026-01-10 22:50:08,267 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 23:51:06] 2026-01-10 22:50:08,267 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 23:51:06] 2026-01-10 22:50:08,267 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 23:51:06] 2026-01-10 22:50:08,267 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 23:51:06] 2026-01-10 22:50:08,267 | INFO     | job 6965382784 has completed (purged errors)
[2026-01-10 23:51:06] 2026-01-10 22:50:08,267 | INFO     | overall cleanup function is called
[2026-01-10 23:51:06] 2026-01-10 22:50:09,276 | INFO     | --- collectZombieJob: --- 10, [30881]
[2026-01-10 23:51:06] 2026-01-10 22:50:09,276 | INFO     | zombie collector waiting for pid 30881
[2026-01-10 23:51:06] 2026-01-10 22:50:09,276 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 23:51:06] 2026-01-10 22:50:09,276 | INFO     | collected zombie processes
[2026-01-10 23:51:06] 2026-01-10 22:50:09,276 | INFO     | will attempt to kill all subprocesses of pid=30881
[2026-01-10 23:51:06] 2026-01-10 22:50:09,355 | INFO     | process IDs to be killed: [30881] (in reverse order)
[2026-01-10 23:51:06] 2026-01-10 22:50:10,278 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 23:51:06] 2026-01-10 22:50:10,279 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 23:51:06] 2026-01-10 22:50:10,281 | INFO     | did not find any defunct processes belonging to 30881
[2026-01-10 23:51:06] 2026-01-10 22:50:10,282 | INFO     | did not find any defunct processes belonging to 30881
[2026-01-10 23:51:06] 2026-01-10 22:50:10,282 | INFO     | ready for new job
[2026-01-10 23:51:06] 2026-01-10 22:50:10,283 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 23:51:06] 2026-01-10 22:50:10,285 | INFO     | ***************************************
[2026-01-10 23:51:06] 2026-01-10 22:50:10,285 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 23:51:06] 2026-01-10 22:50:10,285 | INFO     | ***************************************
[2026-01-10 23:51:06] 2026-01-10 22:50:10,285 | INFO     | 
[2026-01-10 23:51:06] 2026-01-10 22:50:10,286 | INFO     | pilot is running in a VM
[2026-01-10 23:51:06] 2026-01-10 22:50:10,286 | INFO     | architecture information:
[2026-01-10 23:51:06] 2026-01-10 22:50:10,294 | INFO     | executing command: cat /etc/os-release
[2026-01-10 23:51:06] 2026-01-10 22:50:10,514 | INFO     | cat /etc/os-release:
[2026-01-10 23:51:06] NAME="CentOS Linux"
[2026-01-10 23:51:06] VERSION="7 (Core)"
[2026-01-10 23:51:06] ID="centos"
[2026-01-10 23:51:06] ID_LIKE="rhel fedora"
[2026-01-10 23:51:06] VERSION_ID="7"
[2026-01-10 23:51:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 23:51:06] ANSI_COLOR="0;31"
[2026-01-10 23:51:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 23:51:06] HOME_URL="https://www.centos.org/"
[2026-01-10 23:51:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 23:51:06] 
[2026-01-10 23:51:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 23:51:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 23:51:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 23:51:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 23:51:06] 
[2026-01-10 23:51:06] 2026-01-10 22:50:10,514 | INFO     | ***************************************
[2026-01-10 23:51:06] 2026-01-10 22:50:11,018 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-10 23:51:06] 2026-01-10 22:50:11,248 | INFO     | sufficient remaining disk space (497271439360 B)
[2026-01-10 23:51:06] 2026-01-10 22:50:11,249 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 23:51:06] 2026-01-10 22:50:11,249 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 23:51:06] 2026-01-10 22:50:11,249 | INFO     | update_server=False
[2026-01-10 23:51:06] 2026-01-10 22:50:11,249 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 23:51:06] 2026-01-10 22:50:11,827 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 23:51:06] 2026-01-10 22:50:11,922 | INFO     | all job control threads have been joined
[2026-01-10 23:51:06] 2026-01-10 22:50:11,926 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 23:51:06] 2026-01-10 22:50:11,926 | INFO     | aborting loop
[2026-01-10 23:51:06] 2026-01-10 22:50:12,157 | INFO     | all data control threads have been joined
[2026-01-10 23:51:06] 2026-01-10 22:50:12,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 23:51:06] 2026-01-10 22:50:12,255 | INFO     | [job] retrieve thread has finished
[2026-01-10 23:51:06] 2026-01-10 22:50:12,479 | INFO     | [data] copytool_in thread has finished
[2026-01-10 23:51:06] 2026-01-10 22:50:12,639 | INFO     | all payload control threads have been joined
[2026-01-10 23:51:06] 2026-01-10 22:50:12,808 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 23:51:06] 2026-01-10 22:50:12,928 | INFO     | [job] control thread has finished
[2026-01-10 23:51:06] 2026-01-10 22:50:12,932 | INFO     | [job] job monitor thread has finished
[2026-01-10 23:51:06] 2026-01-10 22:50:13,163 | INFO     | [data] control thread has finished
[2026-01-10 23:51:06] 2026-01-10 22:50:13,182 | INFO     | [payload] failed_post thread has finished
[2026-01-10 23:51:06] 2026-01-10 22:50:13,189 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 23:51:06] 2026-01-10 22:50:13,259 | INFO     | [job] queue monitor thread has finished
[2026-01-10 23:51:06] 2026-01-10 22:50:13,260 | INFO     | [payload] validate_post thread has finished
[2026-01-10 23:51:06] 2026-01-10 22:50:13,286 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 23:51:06] 2026-01-10 22:50:13,314 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 23:51:06] 2026-01-10 22:50:13,468 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 23:51:06] 2026-01-10 22:50:13,637 | INFO     | [job] validate thread has finished
[2026-01-10 23:51:06] 2026-01-10 22:50:13,645 | INFO     | [payload] control thread has finished
[2026-01-10 23:51:06] 2026-01-10 22:50:13,834 | INFO     | [data] copytool_out thread has finished
[2026-01-10 23:51:06] 2026-01-10 22:50:17,323 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 23:51:06] 2026-01-10 22:50:39,806 | INFO     | PID=24377 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 23:51:06] 2026-01-10 22:50:39,806 | INFO     | .. there are 2 such processes running
[2026-01-10 23:51:06] 2026-01-10 22:50:39,813 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 23:51:06] 2026-01-10 22:50:39,813 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 23:51:06] 2026-01-10 22:50:39,813 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 23:51:06] 2026-01-10 22:50:55,430 | INFO     | [monitor] cgroup control has ended
[2026-01-10 23:51:06] 2026-01-10 22:50:55,836 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140245910890304)>', '<ExcThread(monitor, started 140245597132544)>']
[2026-01-10 23:51:06] 2026-01-10 22:50:55,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 23:51:06] 2026-01-10 22:50:55,909 | INFO     | [monitor] control thread has ended
[2026-01-10 23:51:06] 2026-01-10 22:51:00,862 | INFO     | all workflow threads have been joined
[2026-01-10 23:51:06] 2026-01-10 22:51:00,862 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 23:51:06] 2026-01-10 22:51:00,862 | INFO     | traces error code: 0
[2026-01-10 23:51:06] 2026-01-10 22:51:00,862 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 23:51:06] 2026-01-10 22:51:01,314 [wrapper] ==== pilot stdout END ====
[2026-01-10 23:51:06] 2026-01-10 22:51:01,424 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 23:51:06] 2026-01-10 22:51:01,550 [wrapper] pilotpid: 24377
[2026-01-10 23:51:06] 2026-01-10 22:51:01,636 [wrapper] Pilot exit status: 0
[2026-01-10 23:51:06] 2026-01-10 22:51:02,145 [wrapper] pandaids: 6965382784
[2026-01-10 23:51:06] 2026-01-10 22:51:03,145 [wrapper] cleanup supervisor_pilot 27482 24378
[2026-01-10 23:51:06] 2026-01-10 22:51:03,256 [wrapper] Test setup, not cleaning
[2026-01-10 23:51:06] 2026-01-10 22:51:03,359 [wrapper] apfmon messages muted
[2026-01-10 23:51:06] 2026-01-10 22:51:03,448 [wrapper] ==== wrapper stdout END ====
[2026-01-10 23:51:06] 2026-01-10 22:51:03,549 [wrapper] ==== wrapper stderr END ====
[2026-01-10 23:51:06]  *** Error codes and diagnostics ***
[2026-01-10 23:51:06]     "exeErrorCode": 0,
[2026-01-10 23:51:06]     "exeErrorDiag": "",
[2026-01-10 23:51:06]     "pilotErrorCode": 0,
[2026-01-10 23:51:06]     "pilotErrorDiag": "",
[2026-01-10 23:51:06]  *** Listing of results directory ***
[2026-01-10 23:51:06] total 445568
[2026-01-10 23:51:06] -rw-r--r--. 1 boinc boinc      5112 Jan 10 14:09 queuedata.json
[2026-01-10 23:51:06] -rw-r--r--. 1 boinc boinc    579449 Jan 10 14:09 pilot3.tar.gz
[2026-01-10 23:51:06] -rwx------. 1 boinc boinc     36322 Jan 10 14:10 runpilot2-wrapper.sh
[2026-01-10 23:51:06] -rw-r--r--. 1 boinc boinc       100 Jan 10 18:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 23:51:06] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 18:21 run_atlas
[2026-01-10 23:51:06] -rw-r--r--. 1 boinc boinc       105 Jan 10 18:21 job.xml
[2026-01-10 23:51:06] -rw-r--r--. 1 boinc boinc      6391 Jan 10 18:21 init_data.xml
[2026-01-10 23:51:06] -rw-r--r--. 2 boinc boinc 228879719 Jan 10 18:21 EVNT.47898824._001168.pool.root.1
[2026-01-10 23:51:06] -rw-r--r--. 2 boinc boinc     15847 Jan 10 18:21 start_atlas.sh
[2026-01-10 23:51:06] drwxrwx--x. 2 boinc boinc        68 Jan 10 18:21 shared
[2026-01-10 23:51:06] -rw-r--r--. 2 boinc boinc    592406 Jan 10 18:21 input.tar.gz
[2026-01-10 23:51:06] -rw-r--r--. 1 boinc boinc         0 Jan 10 18:21 boinc_lockfile
[2026-01-10 23:51:06] -rw-r--r--. 1 boinc boinc      2519 Jan 10 18:22 pandaJob.out
[2026-01-10 23:51:06] -rw-------. 1 boinc boinc    989548 Jan 10 18:26 agis_schedconf.cvmfs.json
[2026-01-10 23:51:06] drwx------. 5 boinc boinc      4096 Jan 10 18:26 pilot3
[2026-01-10 23:51:06] -rw-------. 1 boinc boinc 217259746 Jan 10 23:46 HITS.47898826._040360.pool.root.1
[2026-01-10 23:51:06] -rw-r--r--. 1 boinc boinc       531 Jan 10 23:47 boinc_task_state.xml
[2026-01-10 23:51:06] -rw-------. 1 boinc boinc      1008 Jan 10 23:47 memory_monitor_summary.json
[2026-01-10 23:51:06] -rw-------. 1 boinc boinc   1516240 Jan 10 23:48 agis_ddmendpoints.agis.ALL.json
[2026-01-10 23:51:06] -rw-------. 1 boinc boinc    522552 Jan 10 23:48 log.47898826._040360.job.log.tgz.1
[2026-01-10 23:51:06] -rw-------. 1 boinc boinc      7772 Jan 10 23:50 heartbeat.json
[2026-01-10 23:51:06] -rw-r--r--. 1 boinc boinc        28 Jan 10 23:50 wrapper_checkpoint.txt
[2026-01-10 23:51:06] -rw-------. 1 boinc boinc        95 Jan 10 23:50 pilot_heartbeat.json
[2026-01-10 23:51:06] -rw-r--r--. 1 boinc boinc      8192 Jan 10 23:50 boinc_mmap_file
[2026-01-10 23:51:06] -rw-------. 1 boinc boinc      4884 Jan 10 23:51 pilotlog.txt
[2026-01-10 23:51:06] -rw-------. 1 boinc boinc   2589331 Jan 10 23:51 log.47898826._040360.job.log.1
[2026-01-10 23:51:06] -rw-------. 1 boinc boinc       357 Jan 10 23:51 output.list
[2026-01-10 23:51:06] -rw-r--r--. 1 boinc boinc       620 Jan 10 23:51 runtime_log
[2026-01-10 23:51:06] -rw-------. 1 boinc boinc   3133440 Jan 10 23:51 result.tar.gz
[2026-01-10 23:51:06] -rw-r--r--. 1 boinc boinc      8817 Jan 10 23:51 runtime_log.err
[2026-01-10 23:51:06] -rw-------. 1 boinc boinc       656 Jan 10 23:51 nuFKDmUuny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0UhKDmO56iLo.diag
[2026-01-10 23:51:06] -rw-r--r--. 1 boinc boinc     20773 Jan 10 23:51 stderr.txt
[2026-01-10 23:51:06] HITS file was successfully produced:
[2026-01-10 23:51:06] -rw-------. 1 boinc boinc 217259746 Jan 10 23:46 shared/HITS.pool.root.1
[2026-01-10 23:51:06]  *** Contents of shared directory: ***
[2026-01-10 23:51:06] total 439340
[2026-01-10 23:51:06] -rw-r--r--. 2 boinc boinc 228879719 Jan 10 18:21 ATLAS.root_0
[2026-01-10 23:51:06] -rw-r--r--. 2 boinc boinc     15847 Jan 10 18:21 start_atlas.sh
[2026-01-10 23:51:06] -rw-r--r--. 2 boinc boinc    592406 Jan 10 18:21 input.tar.gz
[2026-01-10 23:51:06] -rw-------. 1 boinc boinc 217259746 Jan 10 23:46 HITS.pool.root.1
[2026-01-10 23:51:06] -rw-------. 1 boinc boinc   3133440 Jan 10 23:51 result.tar.gz
23:51:08 (20651): run_atlas exited; CPU time 71205.198996
23:51:08 (20651): called boinc_finish(0)

</stderr_txt>
]]>

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