Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:31:30 (2379027): wrapper (7.7.26015): starting
08:31:30 (2379027): wrapper: running run_atlas (--nthreads 10)
[2026-01-10 08:31:30] Arguments: --nthreads 10
[2026-01-10 08:31:30] Threads: 10
[2026-01-10 08:31:30] Checking for CVMFS
[2026-01-10 08:31:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:31:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:31:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:31:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:31:31] 2.13.3.0 16090 94865 411072 154981 0 559 30492001 32935937 20137 16776704 0 1018349407 99.549 1178532630 52169 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:31:31] CVMFS is ok
[2026-01-10 08:31:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:31:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:31:31] Further information can be found at the LHC@home message board.
[2026-01-10 08:31:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:31:31] Checking for apptainer binary...
[2026-01-10 08:31:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:31:31] Running /usr/bin/apptainer --version
[2026-01-10 08:31:31] apptainer version 1.4.5-2.el9
[2026-01-10 08:31:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:31:31] c7-9-15.aglt2.org
[2026-01-10 08:31:31] apptainer works
[2026-01-10 08:31:31] Set ATHENA_PROC_NUMBER=10
[2026-01-10 08:31:31] Set ATHENA_CORE_NUMBER=10
[2026-01-10 08:31:31] Starting ATLAS job with PandaID=6965384481
[2026-01-10 08:31:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:17:53]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:17:53] 2026-01-10 14:16:51,506 | INFO     | job 6965384481 has finished - writing final server update
[2026-01-10 09:17:53] 2026-01-10 14:16:51,506 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:17:53] 2026-01-10 14:16:51,514 | INFO     | executing command: lscpu
[2026-01-10 09:17:53] 2026-01-10 14:16:51,734 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:17:53] 2026-01-10 14:16:51,991 | INFO     | monitor loop #180: job 0:6965384481 is in state 'finished'
[2026-01-10 09:17:53] 2026-01-10 14:16:51,992 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:17:53] 2026-01-10 14:16:52,138 | INFO     | time since job start (2710s) is within the limit (349056.0s)
[2026-01-10 09:17:53] 2026-01-10 14:16:54,147 | INFO     | time since job start (2712s) is within the limit (349056.0s)
[2026-01-10 09:17:53] 2026-01-10 14:16:54,496 | INFO     | monitor loop #181: job 0:6965384481 is in state 'finished'
[2026-01-10 09:17:53] 2026-01-10 14:16:54,496 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:17:53] 2026-01-10 14:16:56,154 | INFO     | time since job start (2714s) is within the limit (349056.0s)
[2026-01-10 09:17:53] 2026-01-10 14:16:57,001 | INFO     | monitor loop #182: job 0:6965384481 is in state 'finished'
[2026-01-10 09:17:53] 2026-01-10 14:16:57,001 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:17:53] 2026-01-10 14:16:58,456 | INFO     | PID=2387537 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:17:53] 2026-01-10 14:16:58,456 | INFO     | .. there are 32 such processes running
[2026-01-10 09:17:53] 2026-01-10 14:16:59,456 | INFO     | time since job start (2717s) is within the limit (349056.0s)
[2026-01-10 09:17:53] 2026-01-10 14:16:59,509 | INFO     | monitor loop #183: job 0:6965384481 is in state 'finished'
[2026-01-10 09:17:53] 2026-01-10 14:16:59,509 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:17:53] 2026-01-10 14:17:01,463 | INFO     | time since job start (2719s) is within the limit (349056.0s)
[2026-01-10 09:17:53] 2026-01-10 14:17:02,014 | INFO     | monitor loop #184: job 0:6965384481 is in state 'finished'
[2026-01-10 09:17:53] 2026-01-10 14:17:02,014 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:17:53] 2026-01-10 14:17:03,484 | INFO     | time since job start (2721s) is within the limit (349056.0s)
[2026-01-10 09:17:53] 2026-01-10 14:17:04,519 | INFO     | monitor loop #185: job 0:6965384481 is in state 'finished'
[2026-01-10 09:17:53] 2026-01-10 14:17:04,519 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:17:53] 2026-01-10 14:17:05,504 | INFO     | time since job start (2723s) is within the limit (349056.0s)
[2026-01-10 09:17:53] 2026-01-10 14:17:07,048 | INFO     | monitor loop #186: job 0:6965384481 is in state 'finished'
[2026-01-10 09:17:53] 2026-01-10 14:17:07,048 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:17:53] 2026-01-10 14:17:07,529 | INFO     | time since job start (2725s) is within the limit (349056.0s)
[2026-01-10 09:17:53] 2026-01-10 14:17:09,536 | INFO     | time since job start (2727s) is within the limit (349056.0s)
[2026-01-10 09:17:53] 2026-01-10 14:17:09,556 | INFO     | monitor loop #187: job 0:6965384481 is in state 'finished'
[2026-01-10 09:17:53] 2026-01-10 14:17:09,556 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:17:53] 2026-01-10 14:17:11,543 | INFO     | time since job start (2729s) is within the limit (349056.0s)
[2026-01-10 09:17:53] 2026-01-10 14:17:11,543 | INFO     | 2731s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-10 09:17:53] 2026-01-10 14:17:12,076 | INFO     | monitor loop #188: job 0:6965384481 is in state 'finished'
[2026-01-10 09:17:53] 2026-01-10 14:17:12,076 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:17:53] 2026-01-10 14:17:13,550 | INFO     | time since job start (2731s) is within the limit (349056.0s)
[2026-01-10 09:17:53] 2026-01-10 14:17:14,581 | INFO     | monitor loop #189: job 0:6965384481 is in state 'finished'
[2026-01-10 09:17:53] 2026-01-10 14:17:14,581 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:17:53] 2026-01-10 14:17:15,557 | INFO     | time since job start (2733s) is within the limit (349056.0s)
[2026-01-10 09:17:53] 2026-01-10 14:17:16,795 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 09:17:53] 2026-01-10 14:17:16,818 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.2424375000014
[2026-01-10 09:17:53] 2026-01-10 14:17:16,887 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6965384481/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:17:53] 2026-01-10 14:17:16,888 | INFO     | extracted standard info from prmon json
[2026-01-10 09:17:53] 2026-01-10 14:17:16,888 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:17:53] 2026-01-10 14:17:16,888 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:17:53] 2026-01-10 14:17:16,888 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:17:53] 2026-01-10 14:17:16,889 | INFO     | sum of square deviations: 15683219.297297299
[2026-01-10 09:17:53] 2026-01-10 14:17:16,889 | INFO     | sum of deviations: -7276041739.756758
[2026-01-10 09:17:53] 2026-01-10 14:17:16,889 | INFO     | mean x: 1768053332.7297297
[2026-01-10 09:17:53] 2026-01-10 14:17:16,889 | INFO     | mean y: 2366936.3243243243
[2026-01-10 09:17:53] 2026-01-10 14:17:16,889 | INFO     | intersect: 820269532955.8987
[2026-01-10 09:17:53] 2026-01-10 14:17:16,889 | INFO     | chi2: 4.69559485710664
[2026-01-10 09:17:53] 2026-01-10 14:17:16,889 | INFO     | current memory leak: -463.94 B/s (using 37 data points, chi2=4.70)
[2026-01-10 09:17:53] 2026-01-10 14:17:16,905 | INFO     | could have reported an average CPU frequency of 3800 MHz (5 samples)
[2026-01-10 09:17:53] 2026-01-10 14:17:16,905 | INFO     | ..............................
[2026-01-10 09:17:53] 2026-01-10 14:17:16,905 | INFO     | . Timing measurements:
[2026-01-10 09:17:53] 2026-01-10 14:17:16,905 | INFO     | . get job = 0 s
[2026-01-10 09:17:53] 2026-01-10 14:17:16,905 | INFO     | . initial setup = 2 s
[2026-01-10 09:17:53] 2026-01-10 14:17:16,905 | INFO     | . payload setup = 5 s
[2026-01-10 09:17:53] 2026-01-10 14:17:16,905 | INFO     | . stage-in = 0 s
[2026-01-10 09:17:53] 2026-01-10 14:17:16,905 | INFO     | . payload execution = 2677 s
[2026-01-10 09:17:53] 2026-01-10 14:17:16,905 | INFO     | . stage-out = 1 s
[2026-01-10 09:17:53] 2026-01-10 14:17:16,905 | INFO     | . log creation = 0 s
[2026-01-10 09:17:53] 2026-01-10 14:17:16,905 | INFO     | ..............................
[2026-01-10 09:17:53] 2026-01-10 14:17:17,272 | INFO     | 
[2026-01-10 09:17:53] 2026-01-10 14:17:17,272 | INFO     | job summary report
[2026-01-10 09:17:53] 2026-01-10 14:17:17,272 | INFO     | --------------------------------------------------
[2026-01-10 09:17:53] 2026-01-10 14:17:17,272 | INFO     | PanDA job id: 6965384481
[2026-01-10 09:17:53] 2026-01-10 14:17:17,272 | INFO     | task id: 47962010
[2026-01-10 09:17:53] 2026-01-10 14:17:17,272 | INFO     | errors: (none)
[2026-01-10 09:17:53] 2026-01-10 14:17:17,272 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:17:53] 2026-01-10 14:17:17,272 | INFO     | pilot state: finished 
[2026-01-10 09:17:53] 2026-01-10 14:17:17,272 | INFO     | transexitcode: 0
[2026-01-10 09:17:53] 2026-01-10 14:17:17,272 | INFO     | exeerrorcode: 0
[2026-01-10 09:17:53] 2026-01-10 14:17:17,272 | INFO     | exeerrordiag: 
[2026-01-10 09:17:53] 2026-01-10 14:17:17,272 | INFO     | exitcode: 0
[2026-01-10 09:17:53] 2026-01-10 14:17:17,272 | INFO     | exitmsg: OK
[2026-01-10 09:17:53] 2026-01-10 14:17:17,272 | INFO     | cpuconsumptiontime: 8122 s
[2026-01-10 09:17:53] 2026-01-10 14:17:17,272 | INFO     | nevents: 50
[2026-01-10 09:17:53] 2026-01-10 14:17:17,272 | INFO     | neventsw: 0
[2026-01-10 09:17:53] 2026-01-10 14:17:17,272 | INFO     | pid: 2402406
[2026-01-10 09:17:53] 2026-01-10 14:17:17,272 | INFO     | pgrp: 2402406
[2026-01-10 09:17:53] 2026-01-10 14:17:17,273 | INFO     | corecount: 10
[2026-01-10 09:17:53] 2026-01-10 14:17:17,273 | INFO     | event service: False
[2026-01-10 09:17:53] 2026-01-10 14:17:17,273 | INFO     | sizes: {0: 2284344, 1: 2284599, 6: 2284861, 11: 2284889, 2687: 2311065, 2688: 2311064, 2690: 2320242, 2692: 2320298, 2719: 2320576}
[2026-01-10 09:17:53] 2026-01-10 14:17:17,273 | INFO     | --------------------------------------------------
[2026-01-10 09:17:53] 2026-01-10 14:17:17,273 | INFO     | 
[2026-01-10 09:17:53] 2026-01-10 14:17:17,273 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-10 09:17:53] 2026-01-10 14:17:17,404 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:17:53] 2026-01-10 14:17:17,404 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:17:53] 2026-01-10 14:17:17,404 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:17:53] 2026-01-10 14:17:17,404 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:17:53] 2026-01-10 14:17:17,404 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:17:53] 2026-01-10 14:17:17,404 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:17:53] 2026-01-10 14:17:17,404 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:17:53] 2026-01-10 14:17:17,404 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:17:53] 2026-01-10 14:17:17,404 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:17:53] 2026-01-10 14:17:17,404 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:17:53] 2026-01-10 14:17:17,404 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:17:53] 2026-01-10 14:17:17,404 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:17:53] 2026-01-10 14:17:17,404 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:17:53] 2026-01-10 14:17:17,404 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:17:53] 2026-01-10 14:17:17,404 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:17:53] 2026-01-10 14:17:17,405 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:17:53] 2026-01-10 14:17:17,405 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:17:53] 2026-01-10 14:17:17,405 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:17:53] 2026-01-10 14:17:17,405 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:17:53] 2026-01-10 14:17:17,405 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:17:53] 2026-01-10 14:17:17,405 | INFO     | job 6965384481 has completed (purged errors)
[2026-01-10 09:17:53] 2026-01-10 14:17:17,405 | INFO     | overall cleanup function is called
[2026-01-10 09:17:53] 2026-01-10 14:17:18,464 | INFO     | --- collectZombieJob: --- 10, [2402406]
[2026-01-10 09:17:53] 2026-01-10 14:17:18,464 | INFO     | zombie collector waiting for pid 2402406
[2026-01-10 09:17:53] 2026-01-10 14:17:18,465 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:17:53] 2026-01-10 14:17:18,465 | INFO     | collected zombie processes
[2026-01-10 09:17:53] 2026-01-10 14:17:18,465 | INFO     | will attempt to kill all subprocesses of pid=2402406
[2026-01-10 09:17:53] 2026-01-10 14:17:19,652 | INFO     | process IDs to be killed: [2402406] (in reverse order)
[2026-01-10 09:17:53] 2026-01-10 14:17:20,069 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:17:53] 2026-01-10 14:17:20,069 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:17:53] 2026-01-10 14:17:20,113 | INFO     | did not find any defunct processes belonging to 2402406
[2026-01-10 09:17:53] 2026-01-10 14:17:20,150 | INFO     | did not find any defunct processes belonging to 2402406
[2026-01-10 09:17:53] 2026-01-10 14:17:20,151 | INFO     | ready for new job
[2026-01-10 09:17:53] 2026-01-10 14:17:20,151 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:17:53] 2026-01-10 14:17:20,152 | INFO     | ***************************************
[2026-01-10 09:17:53] 2026-01-10 14:17:20,152 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:17:53] 2026-01-10 14:17:20,152 | INFO     | ***************************************
[2026-01-10 09:17:53] 2026-01-10 14:17:20,152 | INFO     | 
[2026-01-10 09:17:53] 2026-01-10 14:17:20,165 | INFO     | architecture information:
[2026-01-10 09:17:53] 2026-01-10 14:17:20,170 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:17:53] 2026-01-10 14:17:20,263 | INFO     | cat /etc/os-release:
[2026-01-10 09:17:53] NAME="CentOS Linux"
[2026-01-10 09:17:53] VERSION="7 (Core)"
[2026-01-10 09:17:53] ID="centos"
[2026-01-10 09:17:53] ID_LIKE="rhel fedora"
[2026-01-10 09:17:53] VERSION_ID="7"
[2026-01-10 09:17:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:17:53] ANSI_COLOR="0;31"
[2026-01-10 09:17:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:17:53] HOME_URL="https://www.centos.org/"
[2026-01-10 09:17:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:17:53] 
[2026-01-10 09:17:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:17:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:17:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:17:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:17:53] 
[2026-01-10 09:17:53] 2026-01-10 14:17:20,263 | INFO     | ***************************************
[2026-01-10 09:17:53] 2026-01-10 14:17:20,766 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-10 09:17:53] 2026-01-10 14:17:20,850 | INFO     | sufficient remaining disk space (70043828224 B)
[2026-01-10 09:17:53] 2026-01-10 14:17:20,851 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:17:53] 2026-01-10 14:17:20,851 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:17:53] 2026-01-10 14:17:20,851 | INFO     | update_server=False
[2026-01-10 09:17:53] 2026-01-10 14:17:20,851 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:17:53] 2026-01-10 14:17:20,851 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:17:53] 2026-01-10 14:17:20,851 | INFO     | aborting loop
[2026-01-10 09:17:53] 2026-01-10 14:17:21,223 | INFO     | all job control threads have been joined
[2026-01-10 09:17:53] 2026-01-10 14:17:21,522 | INFO     | all payload control threads have been joined
[2026-01-10 09:17:53] 2026-01-10 14:17:21,593 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:17:53] 2026-01-10 14:17:21,857 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:17:53] 2026-01-10 14:17:21,859 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:17:53] 2026-01-10 14:17:21,860 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:17:53] 2026-01-10 14:17:21,933 | INFO     | all data control threads have been joined
[2026-01-10 09:17:53] 2026-01-10 14:17:22,026 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:17:53] 2026-01-10 14:17:22,217 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:17:53] 2026-01-10 14:17:22,229 | INFO     | [job] control thread has finished
[2026-01-10 09:17:53] 2026-01-10 14:17:22,528 | INFO     | [payload] control thread has finished
[2026-01-10 09:17:53] 2026-01-10 14:17:22,584 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:17:53] 2026-01-10 14:17:22,593 | INFO     | [job] validate thread has finished
[2026-01-10 09:17:53] 2026-01-10 14:17:22,699 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:17:53] 2026-01-10 14:17:22,719 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:17:53] 2026-01-10 14:17:22,801 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:17:53] 2026-01-10 14:17:22,939 | INFO     | [data] control thread has finished
[2026-01-10 09:17:53] 2026-01-10 14:17:23,032 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:17:53] 2026-01-10 14:17:23,318 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:17:53] 2026-01-10 14:17:23,609 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:17:53] 2026-01-10 14:17:26,812 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:17:53] 2026-01-10 14:17:31,606 | INFO     | job.realtimelogging is not enabled
[2026-01-10 09:17:53] 2026-01-10 14:17:32,612 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:17:53] 2026-01-10 14:17:46,536 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:17:53] 2026-01-10 14:17:47,093 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139663731074880)>', '<ExcThread(monitor, started 139663377413888)>']
[2026-01-10 09:17:53] 2026-01-10 14:17:49,910 | INFO     | PID=2387537 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:17:53] 2026-01-10 14:17:49,910 | INFO     | .. there are 31 such processes running
[2026-01-10 09:17:53] 2026-01-10 14:17:49,910 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:17:53] 2026-01-10 14:17:49,910 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:17:53] 2026-01-10 14:17:49,910 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:17:53] 2026-01-10 14:17:49,910 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:17:53] 2026-01-10 14:17:49,911 | INFO     | [monitor] control thread has ended
[2026-01-10 09:17:53] 2026-01-10 14:17:52,118 | INFO     | all workflow threads have been joined
[2026-01-10 09:17:53] 2026-01-10 14:17:52,118 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:17:53] 2026-01-10 14:17:52,119 | INFO     | traces error code: 0
[2026-01-10 09:17:53] 2026-01-10 14:17:52,119 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:17:53] 2026-01-10 14:17:52,406 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:17:53] 2026-01-10 14:17:52,422 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:17:53] 2026-01-10 14:17:52,452 [wrapper] pilotpid: 2387537
[2026-01-10 09:17:53] 2026-01-10 14:17:52,467 [wrapper] Pilot exit status: 0
[2026-01-10 09:17:53] 2026-01-10 14:17:52,583 [wrapper] pandaids: 6965384481
[2026-01-10 09:17:53] 2026-01-10 14:17:52,782 [wrapper] cleanup supervisor_pilot 2896516 2387538
[2026-01-10 09:17:53] 2026-01-10 14:17:52,798 [wrapper] Test setup, not cleaning
[2026-01-10 09:17:53] 2026-01-10 14:17:52,810 [wrapper] apfmon messages muted
[2026-01-10 09:17:53] 2026-01-10 14:17:52,822 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:17:53] 2026-01-10 14:17:52,824 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:17:53]  *** Error codes and diagnostics ***
[2026-01-10 09:17:53]     "exeErrorCode": 0,
[2026-01-10 09:17:53]     "exeErrorDiag": "",
[2026-01-10 09:17:53]     "pilotErrorCode": 0,
[2026-01-10 09:17:53]     "pilotErrorDiag": "",
[2026-01-10 09:17:53]  *** Listing of results directory ***
[2026-01-10 09:17:53] total 432060
[2026-01-10 09:17:53] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:17:53] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:17:53] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:15 queuedata.json
[2026-01-10 09:17:53] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:17:53] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:31 run_atlas
[2026-01-10 09:17:53] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:31 job.xml
[2026-01-10 09:17:53] -rw-r--r--. 2 boincer umatlas 393052646 Jan 10 08:31 EVNT.47962006._000120.pool.root.1
[2026-01-10 09:17:53] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:31 start_atlas.sh
[2026-01-10 09:17:53] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:31 shared
[2026-01-10 09:17:53] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 08:31 input.tar.gz
[2026-01-10 09:17:53] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:31 boinc_lockfile
[2026-01-10 09:17:53] -rw-r--r--. 1 boincer umatlas      2891 Jan 10 08:31 pandaJob.out
[2026-01-10 09:17:53] -rw-------. 1 boincer umatlas        57 Jan 10 08:31 setup.sh.local
[2026-01-10 09:17:53] -rw-------. 1 boincer umatlas    989556 Jan 10 08:31 agis_schedconf.cvmfs.json
[2026-01-10 09:17:53] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:31 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:17:53] drwx------. 5 boincer umatlas      4096 Jan 10 08:31 pilot3
[2026-01-10 09:17:53] -rw-r--r--. 1 boincer umatlas       528 Jan 10 09:05 boinc_task_state.xml
[2026-01-10 09:17:53] -rw-r--r--. 1 boincer umatlas      7169 Jan 10 09:09 init_data.xml
[2026-01-10 09:17:53] -rw-------. 1 boincer umatlas  41891865 Jan 10 09:16 HITS.47962010._002617.pool.root.1
[2026-01-10 09:17:53] -rw-------. 1 boincer umatlas      1035 Jan 10 09:16 memory_monitor_summary.json
[2026-01-10 09:17:53] -rw-------. 1 boincer umatlas   1366618 Jan 10 09:16 log.47962010._002617.job.log.tgz.1
[2026-01-10 09:17:53] -rw-------. 1 boincer umatlas      8539 Jan 10 09:17 heartbeat.json
[2026-01-10 09:17:53] -rw-------. 1 boincer umatlas        95 Jan 10 09:17 pilot_heartbeat.json
[2026-01-10 09:17:53] -rw-r--r--. 1 boincer umatlas        26 Jan 10 09:17 wrapper_checkpoint.txt
[2026-01-10 09:17:53] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:17 boinc_mmap_file
[2026-01-10 09:17:53] -rw-------. 1 boincer umatlas      4896 Jan 10 09:17 pilotlog.txt
[2026-01-10 09:17:53] -rw-------. 1 boincer umatlas    412789 Jan 10 09:17 log.47962010._002617.job.log.1
[2026-01-10 09:17:53] -rw-------. 1 boincer umatlas       353 Jan 10 09:17 output.list
[2026-01-10 09:17:53] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:17 runtime_log
[2026-01-10 09:17:53] -rw-------. 1 boincer umatlas   1802240 Jan 10 09:17 result.tar.gz
[2026-01-10 09:17:53] -rw-------. 1 boincer umatlas       649 Jan 10 09:17 rwbKDmcyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIrmKDm29zHWm.diag
[2026-01-10 09:17:53] -rw-r--r--. 1 boincer umatlas      9339 Jan 10 09:17 runtime_log.err
[2026-01-10 09:17:53] -rw-r--r--. 1 boincer umatlas     22471 Jan 10 09:17 stderr.txt
[2026-01-10 09:17:53] HITS file was successfully produced:
[2026-01-10 09:17:53] -rw-------. 1 boincer umatlas 41891865 Jan 10 09:16 shared/HITS.pool.root.1
[2026-01-10 09:17:53]  *** Contents of shared directory: ***
[2026-01-10 09:17:53] total 427120
[2026-01-10 09:17:53] -rw-r--r--. 2 boincer umatlas 393052646 Jan 10 08:31 ATLAS.root_0
[2026-01-10 09:17:53] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:31 start_atlas.sh
[2026-01-10 09:17:53] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 08:31 input.tar.gz
[2026-01-10 09:17:53] -rw-------. 1 boincer umatlas  41891865 Jan 10 09:16 HITS.pool.root.1
[2026-01-10 09:17:53] -rw-------. 1 boincer umatlas   1802240 Jan 10 09:17 result.tar.gz
09:17:54 (2379027): run_atlas exited; CPU time 8132.902785
09:17:54 (2379027): called boinc_finish(0)

</stderr_txt>
]]>

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