Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
16:21:10 (2165883): wrapper (7.7.26015): starting
16:21:10 (2165883): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 16:21:10] Arguments: --nthreads 4
[2026-01-10 16:21:10] Threads: 4
[2026-01-10 16:21:10] Checking for CVMFS
[2026-01-10 16:21:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 16:21:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 16:21:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 16:21:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 16:21:10] 2.13.3.0 355230 4314 57260 154992 1 89 2769941 4096001 5178 130560 0 16869545 99.986 307119 4197 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-10 16:21:10] CVMFS is ok
[2026-01-10 16:21:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 16:21:10] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-10 16:21:10] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-10 16:21:10] Further information can be found at the LHC@home message board.
[2026-01-10 16:21:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 16:21:10] Checking for apptainer binary...
[2026-01-10 16:21:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 16:21:10] Running /usr/bin/apptainer --version
[2026-01-10 16:21:10] apptainer version 1.4.5
[2026-01-10 16:21:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 16:21:10] X-32-ubuntu
[2026-01-10 16:21:10] apptainer works
[2026-01-10 16:21:10] Set ATHENA_PROC_NUMBER=4
[2026-01-10 16:21:10] Set ATHENA_CORE_NUMBER=4
[2026-01-10 16:21:10] Starting ATLAS job with PandaID=6965384478
[2026-01-10 16:21:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 17:11:29]  *** The last 200 lines of the pilot log: ***
[2026-01-10 17:11:29]  protocol_id=None
[2026-01-10 17:11:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 17:11:29]  replicas=None
[2026-01-10 17:11:29]  scope=mc16_13TeV
[2026-01-10 17:11:29]  status=None
[2026-01-10 17:11:29]  status_code=0
[2026-01-10 17:11:29]  storage_token=
[2026-01-10 17:11:29]  surl=/var/lib/boinc/slots/6/PanDA_Pilot-6965384478/log.47962010._002614.job.log.tgz.1
[2026-01-10 17:11:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/3f/49/log.47962010._002614.job.log.tgz.1
[2026-01-10 17:11:29]  workdir=None
[2026-01-10 17:11:29] ]
[2026-01-10 17:11:29] 2026-01-10 22:10:32,672 | INFO     | transferring file log.47962010._002614.job.log.tgz.1 from /var/lib/boinc/slots/6/PanDA_Pilot-6965384478/log.47962010._002614.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-10 17:11:29] 2026-01-10 22:10:32,673 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/6/PanDA_Pilot-6965384478/log.47962010._002614.job.log.tgz.1 /var/lib/boinc/slots/6/log.47962010._002614.job
[2026-01-10 17:11:29] 2026-01-10 22:10:32,688 | INFO     | adding to output.list: log.47962010._002614.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/3f/49/log.47962010._002614.job.log.tgz.
[2026-01-10 17:11:29] 2026-01-10 22:10:32,689 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 17:11:29] 2026-01-10 22:10:32,689 | INFO     | summary of transferred files:
[2026-01-10 17:11:29] 2026-01-10 22:10:32,689 | INFO     |  -- lfn=log.47962010._002614.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 17:11:29] 2026-01-10 22:10:32,689 | INFO     | stage-out finished correctly
[2026-01-10 17:11:29] 2026-01-10 22:10:33,100 | INFO     | time since job start (2956s) is within the limit (349056.0s)
[2026-01-10 17:11:29] 2026-01-10 22:10:33,935 | INFO     | monitor loop #224: job 0:6965384478 is in state 'finished'
[2026-01-10 17:11:29] 2026-01-10 22:10:33,935 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 17:11:29] 2026-01-10 22:10:34,145 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 17:11:29] 2026-01-10 22:10:35,105 | INFO     | time since job start (2958s) is within the limit (349056.0s)
[2026-01-10 17:11:29] 2026-01-10 22:10:36,438 | INFO     | monitor loop #225: job 0:6965384478 is in state 'finished'
[2026-01-10 17:11:29] 2026-01-10 22:10:36,438 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 17:11:29] 2026-01-10 22:10:36,470 | INFO     | job 6965384478 has state=finished
[2026-01-10 17:11:29] 2026-01-10 22:10:36,470 | INFO     | preparing for final server update for job 6965384478 in state='finished'
[2026-01-10 17:11:29] 2026-01-10 22:10:36,470 | INFO     | this job has now completed (state=finished)
[2026-01-10 17:11:29] 2026-01-10 22:10:36,470 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 17:11:29] 2026-01-10 22:10:36,470 | INFO     | log transfer has been attempted: DONE
[2026-01-10 17:11:29] 2026-01-10 22:10:36,470 | INFO     | job 6965384478 has finished - writing final server update
[2026-01-10 17:11:29] 2026-01-10 22:10:36,471 | INFO     | total number of processed events: 50 (read)
[2026-01-10 17:11:29] 2026-01-10 22:10:36,472 | INFO     | executing command: lscpu
[2026-01-10 17:11:29] 2026-01-10 22:10:36,501 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 17:11:29] 2026-01-10 22:10:37,110 | INFO     | time since job start (2960s) is within the limit (349056.0s)
[2026-01-10 17:11:29] 2026-01-10 22:10:38,941 | INFO     | monitor loop #226: job 0:6965384478 is in state 'finished'
[2026-01-10 17:11:29] 2026-01-10 22:10:38,941 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 17:11:29] 2026-01-10 22:10:39,116 | INFO     | time since job start (2962s) is within the limit (349056.0s)
[2026-01-10 17:11:29] 2026-01-10 22:10:39,258 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 17:11:29] 2026-01-10 22:10:39,262 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3816.9458437499993
[2026-01-10 17:11:29] 2026-01-10 22:10:39,266 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6965384478/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 17:11:29] 2026-01-10 22:10:39,267 | INFO     | extracted standard info from prmon json
[2026-01-10 17:11:29] 2026-01-10 22:10:39,267 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 17:11:29] 2026-01-10 22:10:39,267 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 17:11:29] 2026-01-10 22:10:39,268 | INFO     | fitting pss+swap vs Time
[2026-01-10 17:11:29] 2026-01-10 22:10:39,268 | INFO     | sum of square deviations: 22958906.47619046
[2026-01-10 17:11:29] 2026-01-10 22:10:39,268 | INFO     | sum of deviations: -872602400.8095238
[2026-01-10 17:11:29] 2026-01-10 22:10:39,268 | INFO     | mean x: 1768081654.5238094
[2026-01-10 17:11:29] 2026-01-10 22:10:39,268 | INFO     | mean y: 2087790.8095238095
[2026-01-10 17:11:29] 2026-01-10 22:10:39,268 | INFO     | intersect: 67201816931.4263
[2026-01-10 17:11:29] 2026-01-10 22:10:39,269 | INFO     | chi2: 0.11084667099619307
[2026-01-10 17:11:29] 2026-01-10 22:10:39,269 | INFO     | current memory leak: -38.01 B/s (using 42 data points, chi2=0.11)
[2026-01-10 17:11:29] 2026-01-10 22:10:39,269 | INFO     | could have reported an average CPU frequency of 3861 MHz (5 samples)
[2026-01-10 17:11:29] 2026-01-10 22:10:39,269 | INFO     | ..............................
[2026-01-10 17:11:29] 2026-01-10 22:10:39,269 | INFO     | . Timing measurements:
[2026-01-10 17:11:29] 2026-01-10 22:10:39,269 | INFO     | . get job = 0 s
[2026-01-10 17:11:29] 2026-01-10 22:10:39,269 | INFO     | . initial setup = 2 s
[2026-01-10 17:11:29] 2026-01-10 22:10:39,269 | INFO     | . payload setup = 4 s
[2026-01-10 17:11:29] 2026-01-10 22:10:39,269 | INFO     | . stage-in = 0 s
[2026-01-10 17:11:29] 2026-01-10 22:10:39,269 | INFO     | . payload execution = 2932 s
[2026-01-10 17:11:29] 2026-01-10 22:10:39,269 | INFO     | . stage-out = 0 s
[2026-01-10 17:11:29] 2026-01-10 22:10:39,269 | INFO     | . log creation = 0 s
[2026-01-10 17:11:29] 2026-01-10 22:10:39,269 | INFO     | ..............................
[2026-01-10 17:11:29] 2026-01-10 22:10:39,585 | INFO     | 
[2026-01-10 17:11:29] 2026-01-10 22:10:39,585 | INFO     | job summary report
[2026-01-10 17:11:29] 2026-01-10 22:10:39,585 | INFO     | --------------------------------------------------
[2026-01-10 17:11:29] 2026-01-10 22:10:39,586 | INFO     | PanDA job id: 6965384478
[2026-01-10 17:11:29] 2026-01-10 22:10:39,586 | INFO     | task id: 47962010
[2026-01-10 17:11:29] 2026-01-10 22:10:39,586 | INFO     | errors: (none)
[2026-01-10 17:11:29] 2026-01-10 22:10:39,586 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 17:11:29] 2026-01-10 22:10:39,586 | INFO     | pilot state: finished 
[2026-01-10 17:11:29] 2026-01-10 22:10:39,586 | INFO     | transexitcode: 0
[2026-01-10 17:11:29] 2026-01-10 22:10:39,586 | INFO     | exeerrorcode: 0
[2026-01-10 17:11:29] 2026-01-10 22:10:39,586 | INFO     | exeerrordiag: 
[2026-01-10 17:11:29] 2026-01-10 22:10:39,586 | INFO     | exitcode: 0
[2026-01-10 17:11:29] 2026-01-10 22:10:39,586 | INFO     | exitmsg: OK
[2026-01-10 17:11:29] 2026-01-10 22:10:39,586 | INFO     | cpuconsumptiontime: 9936 s
[2026-01-10 17:11:29] 2026-01-10 22:10:39,586 | INFO     | nevents: 50
[2026-01-10 17:11:29] 2026-01-10 22:10:39,586 | INFO     | neventsw: 0
[2026-01-10 17:11:29] 2026-01-10 22:10:39,586 | INFO     | pid: 2176412
[2026-01-10 17:11:29] 2026-01-10 22:10:39,586 | INFO     | pgrp: 2176412
[2026-01-10 17:11:29] 2026-01-10 22:10:39,586 | INFO     | corecount: 4
[2026-01-10 17:11:29] 2026-01-10 22:10:39,587 | INFO     | event service: False
[2026-01-10 17:11:29] 2026-01-10 22:10:39,587 | INFO     | sizes: {0: 2284571, 3: 2284833, 11: 2284861, 2939: 2311033, 2940: 2311032, 2941: 2320082, 2943: 2320266, 2948: 2320544}
[2026-01-10 17:11:29] 2026-01-10 22:10:39,587 | INFO     | --------------------------------------------------
[2026-01-10 17:11:29] 2026-01-10 22:10:39,587 | INFO     | 
[2026-01-10 17:11:29] 2026-01-10 22:10:39,587 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-10 17:11:29] 2026-01-10 22:10:39,603 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 17:11:29] 2026-01-10 22:10:39,603 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 17:11:29] 2026-01-10 22:10:39,603 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 17:11:29] 2026-01-10 22:10:39,603 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 17:11:29] 2026-01-10 22:10:39,603 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 17:11:29] 2026-01-10 22:10:39,603 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 17:11:29] 2026-01-10 22:10:39,604 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 17:11:29] 2026-01-10 22:10:39,604 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 17:11:29] 2026-01-10 22:10:39,604 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 17:11:29] 2026-01-10 22:10:39,604 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 17:11:29] 2026-01-10 22:10:39,604 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 17:11:29] 2026-01-10 22:10:39,604 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 17:11:29] 2026-01-10 22:10:39,604 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 17:11:29] 2026-01-10 22:10:39,604 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 17:11:29] 2026-01-10 22:10:39,604 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 17:11:29] 2026-01-10 22:10:39,604 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 17:11:29] 2026-01-10 22:10:39,604 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 17:11:29] 2026-01-10 22:10:39,604 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 17:11:29] 2026-01-10 22:10:39,604 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 17:11:29] 2026-01-10 22:10:39,604 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 17:11:29] 2026-01-10 22:10:39,604 | INFO     | job 6965384478 has completed (purged errors)
[2026-01-10 17:11:29] 2026-01-10 22:10:39,605 | INFO     | overall cleanup function is called
[2026-01-10 17:11:29] 2026-01-10 22:10:40,616 | INFO     | --- collectZombieJob: --- 10, [2176412]
[2026-01-10 17:11:29] 2026-01-10 22:10:40,616 | INFO     | zombie collector waiting for pid 2176412
[2026-01-10 17:11:29] 2026-01-10 22:10:40,616 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 17:11:29] 2026-01-10 22:10:40,617 | INFO     | collected zombie processes
[2026-01-10 17:11:29] 2026-01-10 22:10:40,617 | INFO     | will attempt to kill all subprocesses of pid=2176412
[2026-01-10 17:11:29] 2026-01-10 22:10:40,784 | INFO     | process IDs to be killed: [2176412] (in reverse order)
[2026-01-10 17:11:29] 2026-01-10 22:10:40,849 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 17:11:29] 2026-01-10 22:10:40,849 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 17:11:29] 2026-01-10 22:10:40,855 | INFO     | did not find any defunct processes belonging to 2176412
[2026-01-10 17:11:29] 2026-01-10 22:10:40,859 | INFO     | did not find any defunct processes belonging to 2176412
[2026-01-10 17:11:29] 2026-01-10 22:10:40,859 | INFO     | ready for new job
[2026-01-10 17:11:29] 2026-01-10 22:10:40,859 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 17:11:29] 2026-01-10 22:10:40,861 | INFO     | ***************************************
[2026-01-10 17:11:29] 2026-01-10 22:10:40,861 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 17:11:29] 2026-01-10 22:10:40,861 | INFO     | ***************************************
[2026-01-10 17:11:29] 2026-01-10 22:10:40,861 | INFO     | 
[2026-01-10 17:11:29] 2026-01-10 22:10:40,862 | INFO     | architecture information:
[2026-01-10 17:11:29] 2026-01-10 22:10:40,862 | INFO     | executing command: cat /etc/os-release
[2026-01-10 17:11:29] 2026-01-10 22:10:40,873 | INFO     | cat /etc/os-release:
[2026-01-10 17:11:29] NAME="CentOS Linux"
[2026-01-10 17:11:29] VERSION="7 (Core)"
[2026-01-10 17:11:29] ID="centos"
[2026-01-10 17:11:29] ID_LIKE="rhel fedora"
[2026-01-10 17:11:29] VERSION_ID="7"
[2026-01-10 17:11:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 17:11:29] ANSI_COLOR="0;31"
[2026-01-10 17:11:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 17:11:29] HOME_URL="https://www.centos.org/"
[2026-01-10 17:11:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 17:11:29] 
[2026-01-10 17:11:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 17:11:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 17:11:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 17:11:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 17:11:29] 
[2026-01-10 17:11:29] 2026-01-10 22:10:40,874 | INFO     | ***************************************
[2026-01-10 17:11:29] 2026-01-10 22:10:41,377 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-10 17:11:29] 2026-01-10 22:10:41,388 | INFO     | sufficient remaining disk space (1799602831360 B)
[2026-01-10 17:11:29] 2026-01-10 22:10:41,388 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 17:11:29] 2026-01-10 22:10:41,389 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 17:11:29] 2026-01-10 22:10:41,389 | INFO     | update_server=False
[2026-01-10 17:11:29] 2026-01-10 22:10:41,389 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 17:11:29] 2026-01-10 22:10:41,389 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 17:11:29] 2026-01-10 22:10:41,444 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 17:11:29] 2026-01-10 22:10:41,444 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 17:11:29] 2026-01-10 22:10:41,444 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:11:29] 2026-01-10 22:10:41,444 | INFO     | will abort loop
[2026-01-10 17:11:29] 2026-01-10 22:10:41,934 | INFO     | all data control threads have been joined
[2026-01-10 17:11:29] 2026-01-10 22:10:42,146 | INFO     | all job control threads have been joined
[2026-01-10 17:11:29] 2026-01-10 22:10:42,256 | INFO     | all payload control threads have been joined
[2026-01-10 17:11:29] 2026-01-10 22:10:42,394 | INFO     | [job] retrieve thread has finished
[2026-01-10 17:11:29] 2026-01-10 22:10:42,450 | INFO     | [job] job monitor thread has finished
[2026-01-10 17:11:29] 2026-01-10 22:10:42,939 | INFO     | [data] control thread has finished
[2026-01-10 17:11:29] 2026-01-10 22:10:43,128 | INFO     | [payload] failed_post thread has finished
[2026-01-10 17:11:29] 2026-01-10 22:10:43,148 | INFO     | [job] control thread has finished
[2026-01-10 17:11:29] 2026-01-10 22:10:43,173 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 17:11:29] 2026-01-10 22:10:43,262 | INFO     | [payload] control thread has finished
[2026-01-10 17:11:29] 2026-01-10 22:10:43,393 | INFO     | [data] copytool_out thread has finished
[2026-01-10 17:11:29] 2026-01-10 22:10:43,602 | INFO     | [job] validate thread has finished
[2026-01-10 17:11:29] 2026-01-10 22:10:43,614 | INFO     | [payload] validate_post thread has finished
[2026-01-10 17:11:29] 2026-01-10 22:10:43,737 | INFO     | [data] copytool_in thread has finished
[2026-01-10 17:11:29] 2026-01-10 22:10:43,748 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 17:11:29] 2026-01-10 22:10:43,810 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 17:11:29] 2026-01-10 22:10:43,851 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 17:11:29] 2026-01-10 22:10:44,344 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:11:29] 2026-01-10 22:10:44,713 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 17:11:29] 2026-01-10 22:10:45,349 | INFO     | [job] queue monitor thread has finished
[2026-01-10 17:11:29] 2026-01-10 22:10:48,719 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 17:11:29] 2026-01-10 22:11:12,377 | INFO     | PID=2169740 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 17:11:29] 2026-01-10 22:11:12,377 | INFO     | .. there are 8 such processes running
[2026-01-10 17:11:29] 2026-01-10 22:11:12,378 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 17:11:29] 2026-01-10 22:11:12,378 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 17:11:29] 2026-01-10 22:11:12,378 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 17:11:29] 2026-01-10 22:11:22,061 | INFO     | [monitor] cgroup control has ended
[2026-01-10 17:11:29] 2026-01-10 22:11:23,956 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129407416661824)>', '<ExcThread(monitor, started 129407045834496)>']
[2026-01-10 17:11:29] 2026-01-10 22:11:24,438 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 17:11:29] 2026-01-10 22:11:24,438 | INFO     | [monitor] control thread has ended
[2026-01-10 17:11:29] 2026-01-10 22:11:28,980 | INFO     | all workflow threads have been joined
[2026-01-10 17:11:29] 2026-01-10 22:11:28,980 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 17:11:29] 2026-01-10 22:11:28,980 | INFO     | traces error code: 0
[2026-01-10 17:11:29] 2026-01-10 22:11:28,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 17:11:29] 2026-01-10 22:11:29,069 [wrapper] ==== pilot stdout END ====
[2026-01-10 17:11:29] 2026-01-10 22:11:29,071 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 17:11:29] 2026-01-10 22:11:29,072 [wrapper] pilotpid: 2169740
[2026-01-10 17:11:29] 2026-01-10 22:11:29,074 [wrapper] Pilot exit status: 0
[2026-01-10 17:11:29] 2026-01-10 22:11:29,080 [wrapper] pandaids: 6965384478
[2026-01-10 17:11:29] 2026-01-10 22:11:29,120 [wrapper] cleanup supervisor_pilot 2300179 2169741
[2026-01-10 17:11:29] 2026-01-10 22:11:29,122 [wrapper] Test setup, not cleaning
[2026-01-10 17:11:29] 2026-01-10 22:11:29,124 [wrapper] apfmon messages muted
[2026-01-10 17:11:29] 2026-01-10 22:11:29,126 [wrapper] ==== wrapper stdout END ====
[2026-01-10 17:11:29] 2026-01-10 22:11:29,128 [wrapper] ==== wrapper stderr END ====
[2026-01-10 17:11:29]  *** Error codes and diagnostics ***
[2026-01-10 17:11:29]     "exeErrorCode": 0,
[2026-01-10 17:11:29]     "exeErrorDiag": "",
[2026-01-10 17:11:29]     "pilotErrorCode": 0,
[2026-01-10 17:11:29]     "pilotErrorDiag": "",
[2026-01-10 17:11:29]  *** Listing of results directory ***
[2026-01-10 17:11:29] total 433016
[2026-01-10 17:11:29] -rw-r--r-- 1 boinc boinc    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 17:11:29] -rwx------ 1 boinc boinc     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 17:11:29] -rw-r--r-- 1 boinc boinc      5112 Jan 10 08:15 queuedata.json
[2026-01-10 17:11:29] -rw-r--r-- 1 boinc boinc       100 Jan 10 16:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 17:11:29] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 16:21 run_atlas
[2026-01-10 17:11:29] -rw-r--r-- 1 boinc boinc       105 Jan 10 16:21 job.xml
[2026-01-10 17:11:29] -rw-r--r-- 2 boinc boinc 393052646 Jan 10 16:21 EVNT.47962006._000120.pool.root.1
[2026-01-10 17:11:29] drwxrwx--x 2 boinc boinc      4096 Jan 10 16:21 shared
[2026-01-10 17:11:29] -rw-r--r-- 2 boinc boinc    592616 Jan 10 16:21 input.tar.gz
[2026-01-10 17:11:29] -rw-r--r-- 1 boinc boinc      9667 Jan 10 16:21 init_data.xml
[2026-01-10 17:11:29] -rw-r--r-- 2 boinc boinc     15847 Jan 10 16:21 start_atlas.sh
[2026-01-10 17:11:29] -rw-r--r-- 1 boinc boinc         0 Jan 10 16:21 boinc_lockfile
[2026-01-10 17:11:29] -rw-r--r-- 1 boinc boinc      2891 Jan 10 16:21 pandaJob.out
[2026-01-10 17:11:29] -rw------- 1 boinc boinc    989548 Jan 10 16:21 agis_schedconf.cvmfs.json
[2026-01-10 17:11:29] -rw------- 1 boinc boinc   1516240 Jan 10 16:21 agis_ddmendpoints.agis.ALL.json
[2026-01-10 17:11:29] drwx------ 5 boinc boinc      4096 Jan 10 16:21 pilot3
[2026-01-10 17:11:29] -rw-r--r-- 1 boinc boinc       529 Jan 10 17:05 boinc_task_state.xml
[2026-01-10 17:11:29] -rw------- 1 boinc boinc  44018613 Jan 10 17:10 HITS.47962010._002614.pool.root.1
[2026-01-10 17:11:29] -rw------- 1 boinc boinc      1018 Jan 10 17:10 memory_monitor_summary.json
[2026-01-10 17:11:29] -rw------- 1 boinc boinc    739668 Jan 10 17:10 log.47962010._002614.job.log.tgz.1
[2026-01-10 17:11:29] -rw------- 1 boinc boinc      8499 Jan 10 17:10 heartbeat.json
[2026-01-10 17:11:29] -rw------- 1 boinc boinc        95 Jan 10 17:11 pilot_heartbeat.json
[2026-01-10 17:11:29] -rw-r--r-- 1 boinc boinc      8192 Jan 10 17:11 boinc_mmap_file
[2026-01-10 17:11:29] -rw-r--r-- 1 boinc boinc        26 Jan 10 17:11 wrapper_checkpoint.txt
[2026-01-10 17:11:29] -rw------- 1 boinc boinc      5011 Jan 10 17:11 pilotlog.txt
[2026-01-10 17:11:29] -rw------- 1 boinc boinc    467758 Jan 10 17:11 log.47962010._002614.job.log.1
[2026-01-10 17:11:29] -rw------- 1 boinc boinc       353 Jan 10 17:11 output.list
[2026-01-10 17:11:29] -rw-r--r-- 1 boinc boinc       620 Jan 10 17:11 runtime_log
[2026-01-10 17:11:29] -rw------- 1 boinc boinc   1228800 Jan 10 17:11 result.tar.gz
[2026-01-10 17:11:29] -rw-r--r-- 1 boinc boinc      8785 Jan 10 17:11 runtime_log.err
[2026-01-10 17:11:29] -rw------- 1 boinc boinc       642 Jan 10 17:11 EtZKDmcyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGrmKDmPpEZ0m.diag
[2026-01-10 17:11:29] -rw-r--r-- 1 boinc boinc     21955 Jan 10 17:11 stderr.txt
[2026-01-10 17:11:29] HITS file was successfully produced:
[2026-01-10 17:11:29] -rw------- 1 boinc boinc 44018613 Jan 10 17:10 shared/HITS.pool.root.1
[2026-01-10 17:11:29]  *** Contents of shared directory: ***
[2026-01-10 17:11:29] total 428632
[2026-01-10 17:11:29] -rw-r--r-- 2 boinc boinc 393052646 Jan 10 16:21 ATLAS.root_0
[2026-01-10 17:11:29] -rw-r--r-- 2 boinc boinc    592616 Jan 10 16:21 input.tar.gz
[2026-01-10 17:11:29] -rw-r--r-- 2 boinc boinc     15847 Jan 10 16:21 start_atlas.sh
[2026-01-10 17:11:29] -rw------- 1 boinc boinc  44018613 Jan 10 17:10 HITS.pool.root.1
[2026-01-10 17:11:29] -rw------- 1 boinc boinc   1228800 Jan 10 17:11 result.tar.gz
17:11:30 (2165883): run_atlas exited; CPU time 9933.250673
17:11:30 (2165883): called boinc_finish(0)

</stderr_txt>
]]>

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