Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:25:25 (8382): wrapper (7.7.26015): starting
08:25:25 (8382): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:25:25] Arguments: --nthreads 8
[2026-01-10 08:25:25] Threads: 8
[2026-01-10 08:25:25] Checking for CVMFS
[2026-01-10 08:25:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:25:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:25:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:25:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:25:25] 2.11.2.0 2856 209576 87708 154981 2 56 15095037 20275201 1 130560 0 69288434 99.914 10114790 34444 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:25:25] CVMFS is ok
[2026-01-10 08:25:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:25:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:25:25] Further information can be found at the LHC@home message board.
[2026-01-10 08:25:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:25:25] Checking for apptainer binary...
[2026-01-10 08:25:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:25:25] Running /usr/bin/apptainer --version
[2026-01-10 08:25:25] apptainer version 1.3.2-1.el7
[2026-01-10 08:25:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:25:27] c-115-6.aglt2.org
[2026-01-10 08:25:27] apptainer works
[2026-01-10 08:25:27] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:25:27] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:25:27] Starting ATLAS job with PandaID=6965384470
[2026-01-10 08:25:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:14:12]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:14:12]  mtime=0
[2026-01-10 09:14:12]  protocol_id=None
[2026-01-10 09:14:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 09:14:12]  replicas=None
[2026-01-10 09:14:12]  scope=mc16_13TeV
[2026-01-10 09:14:12]  status=None
[2026-01-10 09:14:12]  status_code=0
[2026-01-10 09:14:12]  storage_token=
[2026-01-10 09:14:12]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6965384470/log.47962010._002606.job.log.tgz.1
[2026-01-10 09:14:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/15/10/log.47962010._002606.job.log.tgz.1
[2026-01-10 09:14:12]  workdir=None
[2026-01-10 09:14:12] ]
[2026-01-10 09:14:12] 2026-01-10 14:13:32,612 | INFO     | transferring file log.47962010._002606.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6965384470/log.47962010._002606.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 09:14:12] 2026-01-10 14:13:32,612 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6965384470/log.47962010._002606.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._002606.job
[2026-01-10 09:14:12] 2026-01-10 14:13:32,640 | INFO     | adding to output.list: log.47962010._002606.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/15/10/log.47962010._002606.job.log.tgz.
[2026-01-10 09:14:12] 2026-01-10 14:13:32,641 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 09:14:12] 2026-01-10 14:13:32,641 | INFO     | summary of transferred files:
[2026-01-10 09:14:12] 2026-01-10 14:13:32,642 | INFO     |  -- lfn=log.47962010._002606.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 09:14:12] 2026-01-10 14:13:32,642 | INFO     | stage-out finished correctly
[2026-01-10 09:14:12] 2026-01-10 14:13:32,717 | INFO     | time since job start (2868s) is within the limit (349056.0s)
[2026-01-10 09:14:12] 2026-01-10 14:13:33,645 | INFO     | monitor loop #219: job 0:6965384470 is in state 'finished'
[2026-01-10 09:14:12] 2026-01-10 14:13:33,645 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:14:12] 2026-01-10 14:13:33,686 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 09:14:12] 2026-01-10 14:13:33,812 | INFO     | job 6965384470 has state=finished
[2026-01-10 09:14:12] 2026-01-10 14:13:33,812 | INFO     | preparing for final server update for job 6965384470 in state='finished'
[2026-01-10 09:14:12] 2026-01-10 14:13:33,813 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:14:12] 2026-01-10 14:13:33,813 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:14:12] 2026-01-10 14:13:33,813 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:14:12] 2026-01-10 14:13:33,813 | INFO     | job 6965384470 has finished - writing final server update
[2026-01-10 09:14:12] 2026-01-10 14:13:33,814 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:14:12] 2026-01-10 14:13:33,820 | INFO     | executing command: lscpu
[2026-01-10 09:14:12] 2026-01-10 14:13:33,849 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:14:12] 2026-01-10 14:13:34,728 | INFO     | time since job start (2870s) is within the limit (349056.0s)
[2026-01-10 09:14:12] 2026-01-10 14:13:36,147 | INFO     | monitor loop #220: job 0:6965384470 is in state 'finished'
[2026-01-10 09:14:12] 2026-01-10 14:13:36,148 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:14:12] 2026-01-10 14:13:36,735 | INFO     | time since job start (2872s) is within the limit (349056.0s)
[2026-01-10 09:14:12] 2026-01-10 14:13:37,865 | INFO     | PID=12060 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 09:14:12] 2026-01-10 14:13:38,650 | INFO     | monitor loop #221: job 0:6965384470 is in state 'finished'
[2026-01-10 09:14:12] 2026-01-10 14:13:38,651 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:14:12] 2026-01-10 14:13:38,865 | INFO     | time since job start (2874s) is within the limit (349056.0s)
[2026-01-10 09:14:12] 2026-01-10 14:13:40,102 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 09:14:12] 2026-01-10 14:13:40,105 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2026-01-10 09:14:12] 2026-01-10 14:13:40,107 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965384470/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:14:12] 2026-01-10 14:13:40,108 | INFO     | extracted standard info from prmon json
[2026-01-10 09:14:12] 2026-01-10 14:13:40,109 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:14:12] 2026-01-10 14:13:40,109 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:14:12] 2026-01-10 14:13:40,111 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:14:12] 2026-01-10 14:13:40,111 | INFO     | sum of square deviations: 19830256.0
[2026-01-10 09:14:12] 2026-01-10 14:13:40,111 | INFO     | sum of deviations: -831555258.0000001
[2026-01-10 09:14:12] 2026-01-10 14:13:40,112 | INFO     | mean x: 1768053070.0
[2026-01-10 09:14:12] 2026-01-10 14:13:40,112 | INFO     | mean y: 3030176.975
[2026-01-10 09:14:12] 2026-01-10 14:13:40,112 | INFO     | intersect: 74143970504.80246
[2026-01-10 09:14:12] 2026-01-10 14:13:40,112 | INFO     | chi2: 0.31448291310083965
[2026-01-10 09:14:12] 2026-01-10 14:13:40,112 | INFO     | current memory leak: -41.93 B/s (using 40 data points, chi2=0.31)
[2026-01-10 09:14:12] 2026-01-10 14:13:40,113 | INFO     | could have reported an average CPU frequency of 1902 MHz (5 samples)
[2026-01-10 09:14:12] 2026-01-10 14:13:40,113 | INFO     | ..............................
[2026-01-10 09:14:12] 2026-01-10 14:13:40,113 | INFO     | . Timing measurements:
[2026-01-10 09:14:12] 2026-01-10 14:13:40,113 | INFO     | . get job = 0 s
[2026-01-10 09:14:12] 2026-01-10 14:13:40,113 | INFO     | . initial setup = 2 s
[2026-01-10 09:14:12] 2026-01-10 14:13:40,113 | INFO     | . payload setup = 8 s
[2026-01-10 09:14:12] 2026-01-10 14:13:40,113 | INFO     | . stage-in = 0 s
[2026-01-10 09:14:12] 2026-01-10 14:13:40,113 | INFO     | . payload execution = 2838 s
[2026-01-10 09:14:12] 2026-01-10 14:13:40,114 | INFO     | . stage-out = 0 s
[2026-01-10 09:14:12] 2026-01-10 14:13:40,114 | INFO     | . log creation = 0 s
[2026-01-10 09:14:12] 2026-01-10 14:13:40,114 | INFO     | ..............................
[2026-01-10 09:14:12] 2026-01-10 14:13:40,201 | INFO     | 
[2026-01-10 09:14:12] 2026-01-10 14:13:40,201 | INFO     | job summary report
[2026-01-10 09:14:12] 2026-01-10 14:13:40,201 | INFO     | --------------------------------------------------
[2026-01-10 09:14:12] 2026-01-10 14:13:40,201 | INFO     | PanDA job id: 6965384470
[2026-01-10 09:14:12] 2026-01-10 14:13:40,202 | INFO     | task id: 47962010
[2026-01-10 09:14:12] 2026-01-10 14:13:40,202 | INFO     | errors: (none)
[2026-01-10 09:14:12] 2026-01-10 14:13:40,202 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:14:12] 2026-01-10 14:13:40,202 | INFO     | pilot state: finished 
[2026-01-10 09:14:12] 2026-01-10 14:13:40,202 | INFO     | transexitcode: 0
[2026-01-10 09:14:12] 2026-01-10 14:13:40,203 | INFO     | exeerrorcode: 0
[2026-01-10 09:14:12] 2026-01-10 14:13:40,203 | INFO     | exeerrordiag: 
[2026-01-10 09:14:12] 2026-01-10 14:13:40,203 | INFO     | exitcode: 0
[2026-01-10 09:14:12] 2026-01-10 14:13:40,203 | INFO     | exitmsg: OK
[2026-01-10 09:14:12] 2026-01-10 14:13:40,203 | INFO     | cpuconsumptiontime: 19058 s
[2026-01-10 09:14:12] 2026-01-10 14:13:40,203 | INFO     | nevents: 50
[2026-01-10 09:14:12] 2026-01-10 14:13:40,204 | INFO     | neventsw: 0
[2026-01-10 09:14:12] 2026-01-10 14:13:40,204 | INFO     | pid: 18552
[2026-01-10 09:14:12] 2026-01-10 14:13:40,204 | INFO     | pgrp: 18552
[2026-01-10 09:14:12] 2026-01-10 14:13:40,204 | INFO     | corecount: 8
[2026-01-10 09:14:12] 2026-01-10 14:13:40,204 | INFO     | event service: False
[2026-01-10 09:14:12] 2026-01-10 14:13:40,204 | INFO     | sizes: {0: 2284400, 1: 2284599, 6: 2284861, 12: 2284889, 2850: 2311013, 2852: 2320007, 2853: 2320191, 2859: 2320469}
[2026-01-10 09:14:12] 2026-01-10 14:13:40,205 | INFO     | --------------------------------------------------
[2026-01-10 09:14:12] 2026-01-10 14:13:40,205 | INFO     | 
[2026-01-10 09:14:12] 2026-01-10 14:13:40,205 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 09:14:12] 2026-01-10 14:13:40,234 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:14:12] 2026-01-10 14:13:40,234 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:14:12] 2026-01-10 14:13:40,234 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:14:12] 2026-01-10 14:13:40,235 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:14:12] 2026-01-10 14:13:40,235 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:14:12] 2026-01-10 14:13:40,235 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:14:12] 2026-01-10 14:13:40,235 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:14:12] 2026-01-10 14:13:40,235 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:14:12] 2026-01-10 14:13:40,236 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:14:12] 2026-01-10 14:13:40,236 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:14:12] 2026-01-10 14:13:40,236 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:14:12] 2026-01-10 14:13:40,236 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:14:12] 2026-01-10 14:13:40,236 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:14:12] 2026-01-10 14:13:40,236 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:14:12] 2026-01-10 14:13:40,237 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:14:12] 2026-01-10 14:13:40,237 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:14:12] 2026-01-10 14:13:40,237 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:14:12] 2026-01-10 14:13:40,237 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:14:12] 2026-01-10 14:13:40,237 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:14:12] 2026-01-10 14:13:40,238 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:14:12] 2026-01-10 14:13:40,238 | INFO     | job 6965384470 has completed (purged errors)
[2026-01-10 09:14:12] 2026-01-10 14:13:40,238 | INFO     | overall cleanup function is called
[2026-01-10 09:14:12] 2026-01-10 14:13:41,253 | INFO     | --- collectZombieJob: --- 10, [18552]
[2026-01-10 09:14:12] 2026-01-10 14:13:41,253 | INFO     | zombie collector waiting for pid 18552
[2026-01-10 09:14:12] 2026-01-10 14:13:41,253 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:14:12] 2026-01-10 14:13:41,253 | INFO     | collected zombie processes
[2026-01-10 09:14:12] 2026-01-10 14:13:41,253 | INFO     | will attempt to kill all subprocesses of pid=18552
[2026-01-10 09:14:12] 2026-01-10 14:13:41,340 | INFO     | process IDs to be killed: [18552] (in reverse order)
[2026-01-10 09:14:12] 2026-01-10 14:13:41,397 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:14:12] 2026-01-10 14:13:41,398 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:14:12] 2026-01-10 14:13:41,402 | INFO     | did not find any defunct processes belonging to 18552
[2026-01-10 09:14:12] 2026-01-10 14:13:41,406 | INFO     | did not find any defunct processes belonging to 18552
[2026-01-10 09:14:12] 2026-01-10 14:13:41,406 | INFO     | ready for new job
[2026-01-10 09:14:12] 2026-01-10 14:13:41,406 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:14:12] 2026-01-10 14:13:41,408 | INFO     | ***************************************
[2026-01-10 09:14:12] 2026-01-10 14:13:41,408 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:14:12] 2026-01-10 14:13:41,408 | INFO     | ***************************************
[2026-01-10 09:14:12] 2026-01-10 14:13:41,408 | INFO     | 
[2026-01-10 09:14:12] 2026-01-10 14:13:41,409 | INFO     | architecture information:
[2026-01-10 09:14:12] 2026-01-10 14:13:41,410 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:14:12] 2026-01-10 14:13:41,429 | INFO     | cat /etc/os-release:
[2026-01-10 09:14:12] NAME="CentOS Linux"
[2026-01-10 09:14:12] VERSION="7 (Core)"
[2026-01-10 09:14:12] ID="centos"
[2026-01-10 09:14:12] ID_LIKE="rhel fedora"
[2026-01-10 09:14:12] VERSION_ID="7"
[2026-01-10 09:14:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:14:12] ANSI_COLOR="0;31"
[2026-01-10 09:14:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:14:12] HOME_URL="https://www.centos.org/"
[2026-01-10 09:14:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:14:12] 
[2026-01-10 09:14:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:14:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:14:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:14:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:14:12] 
[2026-01-10 09:14:12] 2026-01-10 14:13:41,429 | INFO     | ***************************************
[2026-01-10 09:14:12] 2026-01-10 14:13:41,931 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 09:14:12] 2026-01-10 14:13:41,952 | INFO     | sufficient remaining disk space (18372100096 B)
[2026-01-10 09:14:12] 2026-01-10 14:13:41,953 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:14:12] 2026-01-10 14:13:41,953 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:14:12] 2026-01-10 14:13:41,953 | INFO     | update_server=False
[2026-01-10 09:14:12] 2026-01-10 14:13:41,954 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:14:12] 2026-01-10 14:13:41,954 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:14:12] 2026-01-10 14:13:42,156 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:14:12] 2026-01-10 14:13:42,157 | INFO     | aborting loop
[2026-01-10 09:14:12] 2026-01-10 14:13:42,368 | INFO     | all payload control threads have been joined
[2026-01-10 09:14:12] 2026-01-10 14:13:42,604 | INFO     | all data control threads have been joined
[2026-01-10 09:14:12] 2026-01-10 14:13:42,956 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:14:12] 2026-01-10 14:13:42,957 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:14:12] 2026-01-10 14:13:43,121 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:14:12] 2026-01-10 14:13:43,167 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:14:12] 2026-01-10 14:13:43,245 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:14:12] 2026-01-10 14:13:43,373 | INFO     | [payload] control thread has finished
[2026-01-10 09:14:12] 2026-01-10 14:13:43,483 | INFO     | all job control threads have been joined
[2026-01-10 09:14:12] 2026-01-10 14:13:43,539 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:14:12] 2026-01-10 14:13:43,610 | INFO     | [data] control thread has finished
[2026-01-10 09:14:12] 2026-01-10 14:13:43,877 | INFO     | [job] validate thread has finished
[2026-01-10 09:14:12] 2026-01-10 14:13:43,909 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:14:12] 2026-01-10 14:13:44,016 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:14:12] 2026-01-10 14:13:44,152 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:14:12] 2026-01-10 14:13:44,253 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:14:12] 2026-01-10 14:13:44,273 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:14:12] 2026-01-10 14:13:44,489 | INFO     | [job] control thread has finished
[2026-01-10 09:14:12] 2026-01-10 14:13:45,251 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:14:12] 2026-01-10 14:13:47,893 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:14:12] 2026-01-10 14:13:48,280 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:14:12] 2026-01-10 14:13:52,349 | INFO     | job.realtimelogging is not enabled
[2026-01-10 09:14:12] 2026-01-10 14:13:53,353 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:14:12] 2026-01-10 14:13:54,510 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140438853994304)>', '<ExcThread(monitor, started 140437880813312)>']
[2026-01-10 09:14:12] 2026-01-10 14:13:59,512 | INFO     | all workflow threads have been joined
[2026-01-10 09:14:12] 2026-01-10 14:13:59,513 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:14:12] 2026-01-10 14:13:59,513 | INFO     | traces error code: 0
[2026-01-10 09:14:12] 2026-01-10 14:13:59,514 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:14:12] 2026-01-10 14:14:12,062 | INFO     | PID=12060 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 09:14:12] 2026-01-10 14:14:12,062 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:14:12] 2026-01-10 14:14:12,062 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:14:12] 2026-01-10 14:14:12,062 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:14:12] 2026-01-10 14:14:12,062 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:14:12] 2026-01-10 14:14:12,062 | INFO     | [monitor] control thread has ended
[2026-01-10 09:14:12] 2026-01-10 14:14:12,178 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:14:12] 2026-01-10 14:14:12,183 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:14:12] 2026-01-10 14:14:12,187 [wrapper] pilotpid: 12060
[2026-01-10 09:14:12] 2026-01-10 14:14:12,192 [wrapper] Pilot exit status: 0
[2026-01-10 09:14:12] 2026-01-10 14:14:12,209 [wrapper] pandaids: 6965384470
[2026-01-10 09:14:12] 2026-01-10 14:14:12,252 [wrapper] cleanup supervisor_pilot  9855 12061
[2026-01-10 09:14:12] 2026-01-10 14:14:12,257 [wrapper] Test setup, not cleaning
[2026-01-10 09:14:12] 2026-01-10 14:14:12,261 [wrapper] apfmon messages muted
[2026-01-10 09:14:12] 2026-01-10 14:14:12,266 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:14:12] 2026-01-10 14:14:12,271 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:14:12]  *** Error codes and diagnostics ***
[2026-01-10 09:14:12]     "exeErrorCode": 0,
[2026-01-10 09:14:12]     "exeErrorDiag": "",
[2026-01-10 09:14:12]     "pilotErrorCode": 0,
[2026-01-10 09:14:12]     "pilotErrorDiag": "",
[2026-01-10 09:14:12]  *** Listing of results directory ***
[2026-01-10 09:14:12] total 435068
[2026-01-10 09:14:12] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:14:12] -rwx------ 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:14:12] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 08:15 queuedata.json
[2026-01-10 09:14:12] -rw-r--r-- 1 boincer umatlas       100 Jan 10 08:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:14:12] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 08:25 run_atlas
[2026-01-10 09:14:12] -rw-r--r-- 1 boincer umatlas       105 Jan 10 08:25 job.xml
[2026-01-10 09:14:12] -rw-r--r-- 2 boincer umatlas 393052646 Jan 10 08:25 EVNT.47962006._000120.pool.root.1
[2026-01-10 09:14:12] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:25 start_atlas.sh
[2026-01-10 09:14:12] drwxrwx--x 2 boincer umatlas      4096 Jan 10 08:25 shared
[2026-01-10 09:14:12] -rw-r--r-- 2 boincer umatlas    592615 Jan 10 08:25 input.tar.gz
[2026-01-10 09:14:12] -rw-r--r-- 1 boincer umatlas         0 Jan 10 08:25 boinc_lockfile
[2026-01-10 09:14:12] -rw-r--r-- 1 boincer umatlas      2891 Jan 10 08:25 pandaJob.out
[2026-01-10 09:14:12] -rw------- 1 boincer umatlas        57 Jan 10 08:25 setup.sh.local
[2026-01-10 09:14:12] -rw------- 1 boincer umatlas    989556 Jan 10 08:25 agis_schedconf.cvmfs.json
[2026-01-10 09:14:12] -rw------- 1 boincer umatlas   1516240 Jan 10 08:25 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:14:12] drwx------ 5 boincer umatlas      4096 Jan 10 08:25 pilot3
[2026-01-10 09:14:12] -rw-r--r-- 1 boincer umatlas       529 Jan 10 09:07 boinc_task_state.xml
[2026-01-10 09:14:12] -rw-r--r-- 1 boincer umatlas      5909 Jan 10 09:11 init_data.xml
[2026-01-10 09:14:12] -rw------- 1 boincer umatlas        95 Jan 10 09:13 pilot_heartbeat.json
[2026-01-10 09:14:12] -rw------- 1 boincer umatlas  45281506 Jan 10 09:13 HITS.47962010._002606.pool.root.1
[2026-01-10 09:14:12] -rw------- 1 boincer umatlas      1049 Jan 10 09:13 memory_monitor_summary.json
[2026-01-10 09:14:12] -rw------- 1 boincer umatlas   1181879 Jan 10 09:13 log.47962010._002606.job.log.tgz.1
[2026-01-10 09:14:12] -rw------- 1 boincer umatlas      8622 Jan 10 09:13 heartbeat.json
[2026-01-10 09:14:12] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 09:13 boinc_mmap_file
[2026-01-10 09:14:12] -rw-r--r-- 1 boincer umatlas        27 Jan 10 09:13 wrapper_checkpoint.txt
[2026-01-10 09:14:12] -rw------- 1 boincer umatlas       745 Jan 10 09:14 pilotlog.txt
[2026-01-10 09:14:12] -rw------- 1 boincer umatlas    447921 Jan 10 09:14 log.47962010._002606.job.log.1
[2026-01-10 09:14:12] -rw------- 1 boincer umatlas       353 Jan 10 09:14 output.list
[2026-01-10 09:14:12] -rw-r--r-- 1 boincer umatlas       620 Jan 10 09:14 runtime_log
[2026-01-10 09:14:12] -rw------- 1 boincer umatlas   1648640 Jan 10 09:14 result.tar.gz
[2026-01-10 09:14:12] -rw------- 1 boincer umatlas       658 Jan 10 09:14 jUVKDmcyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCrmKDm0lNWVn.diag
[2026-01-10 09:14:12] -rw-r--r-- 1 boincer umatlas      9337 Jan 10 09:14 runtime_log.err
[2026-01-10 09:14:12] -rw-r--r-- 1 boincer umatlas     21857 Jan 10 09:14 stderr.txt
[2026-01-10 09:14:12] HITS file was successfully produced:
[2026-01-10 09:14:12] -rw------- 1 boincer umatlas 45281506 Jan 10 09:13 shared/HITS.pool.root.1
[2026-01-10 09:14:12]  *** Contents of shared directory: ***
[2026-01-10 09:14:12] total 430276
[2026-01-10 09:14:12] -rw-r--r-- 2 boincer umatlas 393052646 Jan 10 08:25 ATLAS.root_0
[2026-01-10 09:14:12] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:25 start_atlas.sh
[2026-01-10 09:14:12] -rw-r--r-- 2 boincer umatlas    592615 Jan 10 08:25 input.tar.gz
[2026-01-10 09:14:12] -rw------- 1 boincer umatlas  45281506 Jan 10 09:13 HITS.pool.root.1
[2026-01-10 09:14:12] -rw------- 1 boincer umatlas   1648640 Jan 10 09:14 result.tar.gz
09:14:13 (8382): run_atlas exited; CPU time 18910.471004
09:14:13 (8382): called boinc_finish(0)

</stderr_txt>
]]>

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