Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:23:41 (1174133): wrapper (7.7.26015): starting
08:23:41 (1174133): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:23:41] Arguments: --nthreads 8
[2026-01-10 08:23:41] Threads: 8
[2026-01-10 08:23:41] Checking for CVMFS
[2026-01-10 08:23:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:23:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:23:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:23:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:23:42] 2.13.3.0 17216 94770 382656 154981 3 257 23165561 32935937 18826 16776704 0 1350454060 99.635 1314962896 49936 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:23:42] CVMFS is ok
[2026-01-10 08:23:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:23:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:23:42] Further information can be found at the LHC@home message board.
[2026-01-10 08:23:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:23:42] Checking for apptainer binary...
[2026-01-10 08:23:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:23:42] Running /usr/bin/apptainer --version
[2026-01-10 08:23:42] apptainer version 1.4.5-2.el9
[2026-01-10 08:23:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:23:42] c7-9-14.aglt2.org
[2026-01-10 08:23:42] apptainer works
[2026-01-10 08:23:42] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:23:42] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:23:42] Starting ATLAS job with PandaID=6965384476
[2026-01-10 08:23:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:19:25]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:19:25] ]
[2026-01-10 09:19:25] 2026-01-10 14:18:39,229 | INFO     | transferring file log.47962010._002612.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6965384476/log.47962010._002612.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 09:19:25] 2026-01-10 14:18:39,230 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6965384476/log.47962010._002612.job.log.tgz.1 /tmp/boinchome/slots/1/log.47962010._002612.job
[2026-01-10 09:19:25] 2026-01-10 14:18:39,295 | INFO     | adding to output.list: log.47962010._002612.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/43/3b/log.47962010._002612.job.log.tgz.
[2026-01-10 09:19:25] 2026-01-10 14:18:39,295 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 09:19:25] 2026-01-10 14:18:39,295 | INFO     | summary of transferred files:
[2026-01-10 09:19:25] 2026-01-10 14:18:39,295 | INFO     |  -- lfn=log.47962010._002612.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 09:19:25] 2026-01-10 14:18:39,295 | INFO     | stage-out finished correctly
[2026-01-10 09:19:25] 2026-01-10 14:18:39,398 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 09:19:25] 2026-01-10 14:18:40,111 | INFO     | time since job start (3288s) is within the limit (349056.0s)
[2026-01-10 09:19:25] 2026-01-10 14:18:42,118 | INFO     | time since job start (3290s) is within the limit (349056.0s)
[2026-01-10 09:19:25] 2026-01-10 14:18:42,187 | INFO     | job 6965384476 has state=finished
[2026-01-10 09:19:25] 2026-01-10 14:18:42,187 | INFO     | preparing for final server update for job 6965384476 in state='finished'
[2026-01-10 09:19:25] 2026-01-10 14:18:42,188 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:19:25] 2026-01-10 14:18:42,188 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:19:25] 2026-01-10 14:18:42,188 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:19:25] 2026-01-10 14:18:42,188 | INFO     | job 6965384476 has finished - writing final server update
[2026-01-10 09:19:25] 2026-01-10 14:18:42,188 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:19:25] 2026-01-10 14:18:42,188 | INFO     | executing command: lscpu
[2026-01-10 09:19:25] 2026-01-10 14:18:42,319 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:19:25] 2026-01-10 14:18:43,657 | WARNING  | process 1205211 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 09:19:25] 2026-01-10 14:18:43,657 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965384476/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:19:25] 2026-01-10 14:18:43,658 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965384476/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:19:25] 2026-01-10 14:18:43,658 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-10 09:19:25] 2026-01-10 14:18:43,658 | WARNING  | maxPSS not found in memory monitor output
[2026-01-10 09:19:25] 2026-01-10 14:18:44,085 | INFO     | number of running child processes to parent process 1205211: 1
[2026-01-10 09:19:25] 2026-01-10 14:18:44,085 | INFO     | maximum number of monitored processes: 14
[2026-01-10 09:19:25] 2026-01-10 14:18:44,125 | INFO     | time since job start (3292s) is within the limit (349056.0s)
[2026-01-10 09:19:25] 2026-01-10 14:18:46,132 | INFO     | time since job start (3294s) is within the limit (349056.0s)
[2026-01-10 09:19:25] 2026-01-10 14:18:46,590 | INFO     | monitor loop #217: job 0:6965384476 is in state 'finished'
[2026-01-10 09:19:25] 2026-01-10 14:18:46,590 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:19:25] 2026-01-10 14:18:48,139 | INFO     | time since job start (3296s) is within the limit (349056.0s)
[2026-01-10 09:19:25] 2026-01-10 14:18:49,101 | INFO     | monitor loop #218: job 0:6965384476 is in state 'finished'
[2026-01-10 09:19:25] 2026-01-10 14:18:49,101 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:19:25] 2026-01-10 14:18:49,781 | INFO     | PID=1180000 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-10 09:19:25] 2026-01-10 14:18:49,781 | INFO     | .. there are 24 such processes running
[2026-01-10 09:19:25] 2026-01-10 14:18:50,782 | INFO     | time since job start (3298s) is within the limit (349056.0s)
[2026-01-10 09:19:25] 2026-01-10 14:18:51,606 | INFO     | monitor loop #219: job 0:6965384476 is in state 'finished'
[2026-01-10 09:19:25] 2026-01-10 14:18:51,606 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:19:25] 2026-01-10 14:18:52,277 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 09:19:25] 2026-01-10 14:18:52,282 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.2772734375003
[2026-01-10 09:19:25] 2026-01-10 14:18:52,293 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965384476/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:19:25] 2026-01-10 14:18:52,294 | INFO     | extracted standard info from prmon json
[2026-01-10 09:19:25] 2026-01-10 14:18:52,294 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:19:25] 2026-01-10 14:18:52,294 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:19:25] 2026-01-10 14:18:52,295 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:19:25] 2026-01-10 14:18:52,295 | INFO     | sum of square deviations: 32210589.829787236
[2026-01-10 09:19:25] 2026-01-10 14:18:52,295 | INFO     | sum of deviations: 210983747.7872343
[2026-01-10 09:19:25] 2026-01-10 14:18:52,295 | INFO     | mean x: 1768053166.7021277
[2026-01-10 09:19:25] 2026-01-10 14:18:52,295 | INFO     | mean y: 2599513.1276595746
[2026-01-10 09:19:25] 2026-01-10 14:18:52,295 | INFO     | intersect: -11578389390.49487
[2026-01-10 09:19:25] 2026-01-10 14:18:52,295 | INFO     | chi2: 0.18661756308674482
[2026-01-10 09:19:25] 2026-01-10 14:18:52,295 | INFO     | current memory leak: 6.55 B/s (using 47 data points, chi2=0.19)
[2026-01-10 09:19:25] 2026-01-10 14:18:52,296 | INFO     | could have reported an average CPU frequency of 3800 MHz (5 samples)
[2026-01-10 09:19:25] 2026-01-10 14:18:52,296 | INFO     | ..............................
[2026-01-10 09:19:25] 2026-01-10 14:18:52,296 | INFO     | . Timing measurements:
[2026-01-10 09:19:25] 2026-01-10 14:18:52,296 | INFO     | . get job = 0 s
[2026-01-10 09:19:25] 2026-01-10 14:18:52,296 | INFO     | . initial setup = 2 s
[2026-01-10 09:19:25] 2026-01-10 14:18:52,296 | INFO     | . payload setup = 5 s
[2026-01-10 09:19:25] 2026-01-10 14:18:52,296 | INFO     | . stage-in = 0 s
[2026-01-10 09:19:25] 2026-01-10 14:18:52,296 | INFO     | . payload execution = 3260 s
[2026-01-10 09:19:25] 2026-01-10 14:18:52,296 | INFO     | . stage-out = 1 s
[2026-01-10 09:19:25] 2026-01-10 14:18:52,296 | INFO     | . log creation = 0 s
[2026-01-10 09:19:25] 2026-01-10 14:18:52,296 | INFO     | ..............................
[2026-01-10 09:19:25] 2026-01-10 14:18:52,505 | INFO     | 
[2026-01-10 09:19:25] 2026-01-10 14:18:52,506 | INFO     | job summary report
[2026-01-10 09:19:25] 2026-01-10 14:18:52,506 | INFO     | --------------------------------------------------
[2026-01-10 09:19:25] 2026-01-10 14:18:52,506 | INFO     | PanDA job id: 6965384476
[2026-01-10 09:19:25] 2026-01-10 14:18:52,506 | INFO     | task id: 47962010
[2026-01-10 09:19:25] 2026-01-10 14:18:52,506 | INFO     | errors: (none)
[2026-01-10 09:19:25] 2026-01-10 14:18:52,506 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:19:25] 2026-01-10 14:18:52,506 | INFO     | pilot state: finished 
[2026-01-10 09:19:25] 2026-01-10 14:18:52,506 | INFO     | transexitcode: 0
[2026-01-10 09:19:25] 2026-01-10 14:18:52,506 | INFO     | exeerrorcode: 0
[2026-01-10 09:19:25] 2026-01-10 14:18:52,506 | INFO     | exeerrordiag: 
[2026-01-10 09:19:25] 2026-01-10 14:18:52,506 | INFO     | exitcode: 0
[2026-01-10 09:19:25] 2026-01-10 14:18:52,506 | INFO     | exitmsg: OK
[2026-01-10 09:19:25] 2026-01-10 14:18:52,506 | INFO     | cpuconsumptiontime: 8601 s
[2026-01-10 09:19:25] 2026-01-10 14:18:52,506 | INFO     | nevents: 50
[2026-01-10 09:19:25] 2026-01-10 14:18:52,506 | INFO     | neventsw: 0
[2026-01-10 09:19:25] 2026-01-10 14:18:52,506 | INFO     | pid: 1205211
[2026-01-10 09:19:25] 2026-01-10 14:18:52,506 | INFO     | pgrp: 1205211
[2026-01-10 09:19:25] 2026-01-10 14:18:52,506 | INFO     | corecount: 8
[2026-01-10 09:19:25] 2026-01-10 14:18:52,506 | INFO     | event service: False
[2026-01-10 09:19:25] 2026-01-10 14:18:52,506 | INFO     | sizes: {0: 2284571, 5: 2284833, 11: 2284889, 3270: 2311310, 3272: 2320360, 3285: 2320582}
[2026-01-10 09:19:25] 2026-01-10 14:18:52,506 | INFO     | --------------------------------------------------
[2026-01-10 09:19:25] 2026-01-10 14:18:52,506 | INFO     | 
[2026-01-10 09:19:25] 2026-01-10 14:18:52,506 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 09:19:25] 2026-01-10 14:18:52,548 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:19:25] 2026-01-10 14:18:52,548 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:19:25] 2026-01-10 14:18:52,548 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:19:25] 2026-01-10 14:18:52,548 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:19:25] 2026-01-10 14:18:52,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:19:25] 2026-01-10 14:18:52,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:19:25] 2026-01-10 14:18:52,548 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:19:25] 2026-01-10 14:18:52,548 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:19:25] 2026-01-10 14:18:52,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:19:25] 2026-01-10 14:18:52,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:19:25] 2026-01-10 14:18:52,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:19:25] 2026-01-10 14:18:52,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:19:25] 2026-01-10 14:18:52,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:19:25] 2026-01-10 14:18:52,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:19:25] 2026-01-10 14:18:52,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:19:25] 2026-01-10 14:18:52,549 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:19:25] 2026-01-10 14:18:52,549 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:19:25] 2026-01-10 14:18:52,549 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:19:25] 2026-01-10 14:18:52,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:19:25] 2026-01-10 14:18:52,549 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:19:25] 2026-01-10 14:18:52,549 | INFO     | job 6965384476 has completed (purged errors)
[2026-01-10 09:19:25] 2026-01-10 14:18:52,549 | INFO     | overall cleanup function is called
[2026-01-10 09:19:25] 2026-01-10 14:18:53,561 | INFO     | --- collectZombieJob: --- 10, [1205211]
[2026-01-10 09:19:25] 2026-01-10 14:18:53,562 | INFO     | zombie collector waiting for pid 1205211
[2026-01-10 09:19:25] 2026-01-10 14:18:53,562 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:19:25] 2026-01-10 14:18:53,562 | INFO     | collected zombie processes
[2026-01-10 09:19:25] 2026-01-10 14:18:53,562 | INFO     | will attempt to kill all subprocesses of pid=1205211
[2026-01-10 09:19:25] 2026-01-10 14:18:54,235 | INFO     | process IDs to be killed: [1205211] (in reverse order)
[2026-01-10 09:19:25] 2026-01-10 14:18:54,375 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:19:25] 2026-01-10 14:18:54,375 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:19:25] 2026-01-10 14:18:54,395 | INFO     | did not find any defunct processes belonging to 1205211
[2026-01-10 09:19:25] 2026-01-10 14:18:54,415 | INFO     | did not find any defunct processes belonging to 1205211
[2026-01-10 09:19:25] 2026-01-10 14:18:54,415 | INFO     | ready for new job
[2026-01-10 09:19:25] 2026-01-10 14:18:54,416 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:19:25] 2026-01-10 14:18:54,417 | INFO     | ***************************************
[2026-01-10 09:19:25] 2026-01-10 14:18:54,417 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:19:25] 2026-01-10 14:18:54,417 | INFO     | ***************************************
[2026-01-10 09:19:25] 2026-01-10 14:18:54,417 | INFO     | 
[2026-01-10 09:19:25] 2026-01-10 14:18:54,421 | INFO     | architecture information:
[2026-01-10 09:19:25] 2026-01-10 14:18:54,421 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:19:25] 2026-01-10 14:18:54,434 | INFO     | cat /etc/os-release:
[2026-01-10 09:19:25] NAME="CentOS Linux"
[2026-01-10 09:19:25] VERSION="7 (Core)"
[2026-01-10 09:19:25] ID="centos"
[2026-01-10 09:19:25] ID_LIKE="rhel fedora"
[2026-01-10 09:19:25] VERSION_ID="7"
[2026-01-10 09:19:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:19:25] ANSI_COLOR="0;31"
[2026-01-10 09:19:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:19:25] HOME_URL="https://www.centos.org/"
[2026-01-10 09:19:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:19:25] 
[2026-01-10 09:19:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:19:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:19:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:19:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:19:25] 
[2026-01-10 09:19:25] 2026-01-10 14:18:54,435 | INFO     | ***************************************
[2026-01-10 09:19:25] 2026-01-10 14:18:54,938 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 09:19:25] 2026-01-10 14:18:54,953 | INFO     | sufficient remaining disk space (73815556096 B)
[2026-01-10 09:19:25] 2026-01-10 14:18:54,953 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:19:25] 2026-01-10 14:18:54,953 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:19:25] 2026-01-10 14:18:54,953 | INFO     | update_server=False
[2026-01-10 09:19:25] 2026-01-10 14:18:54,953 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:19:25] 2026-01-10 14:18:54,953 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:19:25] 2026-01-10 14:18:54,954 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:19:25] 2026-01-10 14:18:55,115 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:19:25] 2026-01-10 14:18:55,115 | INFO     | aborting loop
[2026-01-10 09:19:25] 2026-01-10 14:18:55,859 | INFO     | all data control threads have been joined
[2026-01-10 09:19:25] 2026-01-10 14:18:55,908 | INFO     | all job control threads have been joined
[2026-01-10 09:19:25] 2026-01-10 14:18:55,958 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:19:25] 2026-01-10 14:18:55,984 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:19:25] 2026-01-10 14:18:56,120 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:19:25] 2026-01-10 14:18:56,289 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:19:25] 2026-01-10 14:18:56,342 | INFO     | all payload control threads have been joined
[2026-01-10 09:19:25] 2026-01-10 14:18:56,549 | INFO     | [job] validate thread has finished
[2026-01-10 09:19:25] 2026-01-10 14:18:56,676 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:19:25] 2026-01-10 14:18:56,823 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:19:25] 2026-01-10 14:18:56,865 | INFO     | [data] control thread has finished
[2026-01-10 09:19:25] 2026-01-10 14:18:56,887 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:19:25] 2026-01-10 14:18:56,914 | INFO     | [job] control thread has finished
[2026-01-10 09:19:25] 2026-01-10 14:18:56,961 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:19:25] 2026-01-10 14:18:57,131 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:19:25] 2026-01-10 14:18:57,277 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:19:25] 2026-01-10 14:18:57,350 | INFO     | [payload] control thread has finished
[2026-01-10 09:19:25] 2026-01-10 14:18:57,356 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:19:25] 2026-01-10 14:18:58,362 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:19:25] 2026-01-10 14:18:58,963 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:19:25] 2026-01-10 14:19:05,828 | INFO     | job.realtimelogging is not enabled
[2026-01-10 09:19:25] 2026-01-10 14:19:06,834 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:19:25] 2026-01-10 14:19:08,702 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139924272310080)>', '<ExcThread(monitor, started 139923784984320)>']
[2026-01-10 09:19:25] 2026-01-10 14:19:13,727 | INFO     | all workflow threads have been joined
[2026-01-10 09:19:25] 2026-01-10 14:19:13,728 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:19:25] 2026-01-10 14:19:13,728 | INFO     | traces error code: 0
[2026-01-10 09:19:25] 2026-01-10 14:19:13,728 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:19:25] 2026-01-10 14:19:24,296 | INFO     | PID=1180000 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:19:25] 2026-01-10 14:19:24,297 | INFO     | .. there are 24 such processes running
[2026-01-10 09:19:25] 2026-01-10 14:19:24,297 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:19:25] 2026-01-10 14:19:24,297 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:19:25] 2026-01-10 14:19:24,297 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:19:25] 2026-01-10 14:19:24,297 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:19:25] 2026-01-10 14:19:24,297 | INFO     | [monitor] control thread has ended
[2026-01-10 09:19:25] 2026-01-10 14:19:24,436 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:19:25] 2026-01-10 14:19:24,478 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:19:25] 2026-01-10 14:19:24,520 [wrapper] pilotpid: 1180000
[2026-01-10 09:19:25] 2026-01-10 14:19:24,539 [wrapper] Pilot exit status: 0
[2026-01-10 09:19:25] 2026-01-10 14:19:24,620 [wrapper] pandaids: 6965384476
[2026-01-10 09:19:25] 2026-01-10 14:19:24,771 [wrapper] cleanup supervisor_pilot 1737405 1180001
[2026-01-10 09:19:25] 2026-01-10 14:19:24,776 [wrapper] Test setup, not cleaning
[2026-01-10 09:19:25] 2026-01-10 14:19:24,799 [wrapper] apfmon messages muted
[2026-01-10 09:19:25] 2026-01-10 14:19:24,826 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:19:25] 2026-01-10 14:19:24,851 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:19:25]  *** Error codes and diagnostics ***
[2026-01-10 09:19:25]     "exeErrorCode": 0,
[2026-01-10 09:19:25]     "exeErrorDiag": "",
[2026-01-10 09:19:25]     "pilotErrorCode": 0,
[2026-01-10 09:19:25]     "pilotErrorDiag": "",
[2026-01-10 09:19:25]  *** Listing of results directory ***
[2026-01-10 09:19:25] total 435820
[2026-01-10 09:19:25] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:19:25] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:19:25] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:15 queuedata.json
[2026-01-10 09:19:25] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:19:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:23 run_atlas
[2026-01-10 09:19:25] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:23 job.xml
[2026-01-10 09:19:25] -rw-r--r--. 2 boincer umatlas 393052646 Jan 10 08:23 EVNT.47962006._000120.pool.root.1
[2026-01-10 09:19:25] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:23 start_atlas.sh
[2026-01-10 09:19:25] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:23 shared
[2026-01-10 09:19:25] -rw-r--r--. 2 boincer umatlas    592612 Jan 10 08:23 input.tar.gz
[2026-01-10 09:19:25] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:23 boinc_lockfile
[2026-01-10 09:19:25] -rw-r--r--. 1 boincer umatlas      2891 Jan 10 08:23 pandaJob.out
[2026-01-10 09:19:25] -rw-------. 1 boincer umatlas        57 Jan 10 08:23 setup.sh.local
[2026-01-10 09:19:25] -rw-------. 1 boincer umatlas    989556 Jan 10 08:23 agis_schedconf.cvmfs.json
[2026-01-10 09:19:25] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:23 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:19:25] drwx------. 5 boincer umatlas      4096 Jan 10 08:23 pilot3
[2026-01-10 09:19:25] -rw-r--r--. 1 boincer umatlas      7169 Jan 10 09:12 init_data.xml
[2026-01-10 09:19:25] -rw-r--r--. 1 boincer umatlas       528 Jan 10 09:13 boinc_task_state.xml
[2026-01-10 09:19:25] -rw-------. 1 boincer umatlas  46033480 Jan 10 09:18 HITS.47962010._002612.pool.root.1
[2026-01-10 09:19:25] -rw-------. 1 boincer umatlas      1036 Jan 10 09:18 memory_monitor_summary.json
[2026-01-10 09:19:25] -rw-------. 1 boincer umatlas   1154699 Jan 10 09:18 log.47962010._002612.job.log.tgz.1
[2026-01-10 09:19:25] -rw-------. 1 boincer umatlas      8515 Jan 10 09:18 heartbeat.json
[2026-01-10 09:19:25] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:19 boinc_mmap_file
[2026-01-10 09:19:25] -rw-r--r--. 1 boincer umatlas        26 Jan 10 09:19 wrapper_checkpoint.txt
[2026-01-10 09:19:25] -rw-------. 1 boincer umatlas        95 Jan 10 09:19 pilot_heartbeat.json
[2026-01-10 09:19:25] -rw-------. 1 boincer umatlas       823 Jan 10 09:19 pilotlog.txt
[2026-01-10 09:19:25] -rw-------. 1 boincer umatlas    487645 Jan 10 09:19 log.47962010._002612.job.log.1
[2026-01-10 09:19:25] -rw-------. 1 boincer umatlas       353 Jan 10 09:19 output.list
[2026-01-10 09:19:25] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:19 runtime_log
[2026-01-10 09:19:25] -rw-------. 1 boincer umatlas   1658880 Jan 10 09:19 result.tar.gz
[2026-01-10 09:19:25] -rw-r--r--. 1 boincer umatlas      9337 Jan 10 09:19 runtime_log.err
[2026-01-10 09:19:25] -rw-------. 1 boincer umatlas       650 Jan 10 09:19 LnYKDmcyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFrmKDmnSHxon.diag
[2026-01-10 09:19:25] -rw-r--r--. 1 boincer umatlas     22583 Jan 10 09:19 stderr.txt
[2026-01-10 09:19:25] HITS file was successfully produced:
[2026-01-10 09:19:25] -rw-------. 1 boincer umatlas 46033480 Jan 10 09:18 shared/HITS.pool.root.1
[2026-01-10 09:19:25]  *** Contents of shared directory: ***
[2026-01-10 09:19:25] total 431016
[2026-01-10 09:19:25] -rw-r--r--. 2 boincer umatlas 393052646 Jan 10 08:23 ATLAS.root_0
[2026-01-10 09:19:25] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:23 start_atlas.sh
[2026-01-10 09:19:25] -rw-r--r--. 2 boincer umatlas    592612 Jan 10 08:23 input.tar.gz
[2026-01-10 09:19:25] -rw-------. 1 boincer umatlas  46033480 Jan 10 09:18 HITS.pool.root.1
[2026-01-10 09:19:25] -rw-------. 1 boincer umatlas   1658880 Jan 10 09:19 result.tar.gz
09:19:27 (1174133): run_atlas exited; CPU time 8604.002588
09:19:27 (1174133): called boinc_finish(0)

</stderr_txt>
]]>

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