Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:23:31 (3052764): wrapper (7.7.26015): starting
08:23:31 (3052764): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 08:23:31] Arguments: --nthreads 9
[2026-01-10 08:23:31] Threads: 9
[2026-01-10 08:23:31] Checking for CVMFS
[2026-01-10 08:23:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:23:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:23:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:23:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:23:32] 2.13.3.0 22787 94854 183076 154981 1 267 26916167 40960001 18829 16776704 0 1128143405 99.713 834161388 49894 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:23:32] CVMFS is ok
[2026-01-10 08:23:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:23:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:23:32] Further information can be found at the LHC@home message board.
[2026-01-10 08:23:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:23:32] Checking for apptainer binary...
[2026-01-10 08:23:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:23:32] Running /usr/bin/apptainer --version
[2026-01-10 08:23:32] apptainer version 1.4.5-2.el9
[2026-01-10 08:23:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:23:32] c8-6-11.aglt2.org
[2026-01-10 08:23:32] apptainer works
[2026-01-10 08:23:32] Set ATHENA_PROC_NUMBER=9
[2026-01-10 08:23:32] Set ATHENA_CORE_NUMBER=9
[2026-01-10 08:23:33] Starting ATLAS job with PandaID=6965384259
[2026-01-10 08:23:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:07:11]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:07:11] 2026-01-10 14:06:19,995 | INFO     | summary of transferred files:
[2026-01-10 09:07:11] 2026-01-10 14:06:19,995 | INFO     |  -- lfn=log.47962010._002400.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 09:07:11] 2026-01-10 14:06:19,995 | INFO     | stage-out finished correctly
[2026-01-10 09:07:11] 2026-01-10 14:06:20,049 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 09:07:11] 2026-01-10 14:06:20,099 | INFO     | job 6965384259 has state=finished
[2026-01-10 09:07:11] 2026-01-10 14:06:20,099 | INFO     | preparing for final server update for job 6965384259 in state='finished'
[2026-01-10 09:07:11] 2026-01-10 14:06:20,099 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:07:11] 2026-01-10 14:06:20,100 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:07:11] 2026-01-10 14:06:20,100 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:07:11] 2026-01-10 14:06:20,100 | INFO     | job 6965384259 has finished - writing final server update
[2026-01-10 09:07:11] 2026-01-10 14:06:20,100 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:07:11] 2026-01-10 14:06:20,100 | INFO     | executing command: lscpu
[2026-01-10 09:07:11] 2026-01-10 14:06:20,211 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:07:11] 2026-01-10 14:06:21,661 | INFO     | time since job start (2541s) is within the limit (349056.0s)
[2026-01-10 09:07:11] 2026-01-10 14:06:23,362 | WARNING  | process 3103802 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 09:07:11] 2026-01-10 14:06:23,362 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6965384259/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:07:11] 2026-01-10 14:06:23,364 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6965384259/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:07:11] 2026-01-10 14:06:23,364 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-10 09:07:11] 2026-01-10 14:06:23,364 | WARNING  | maxPSS not found in memory monitor output
[2026-01-10 09:07:11] 2026-01-10 14:06:23,364 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3455705 B
[2026-01-10 09:07:11] 2026-01-10 14:06:23,364 | INFO     | payload log (log.HITSMergeAthenaMP0) within allowed size limit (2147483648 B): 164688 B
[2026-01-10 09:07:11] 2026-01-10 14:06:23,365 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 13338 B
[2026-01-10 09:07:11] 2026-01-10 14:06:23,365 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 09:07:11] 2026-01-10 14:06:23,692 | INFO     | time since job start (2543s) is within the limit (349056.0s)
[2026-01-10 09:07:11] 2026-01-10 14:06:25,699 | INFO     | time since job start (2545s) is within the limit (349056.0s)
[2026-01-10 09:07:11] 2026-01-10 14:06:27,706 | INFO     | time since job start (2547s) is within the limit (349056.0s)
[2026-01-10 09:07:11] 2026-01-10 14:06:29,723 | INFO     | time since job start (2549s) is within the limit (349056.0s)
[2026-01-10 09:07:11] 2026-01-10 14:06:31,541 | INFO     | PID=3072781 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-10 09:07:11] 2026-01-10 14:06:31,541 | INFO     | .. there are 21 such processes running
[2026-01-10 09:07:11] 2026-01-10 14:06:32,544 | INFO     | time since job start (2552s) is within the limit (349056.0s)
[2026-01-10 09:07:11] 2026-01-10 14:06:34,555 | INFO     | time since job start (2554s) is within the limit (349056.0s)
[2026-01-10 09:07:11] 2026-01-10 14:06:35,094 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 09:07:11] 2026-01-10 14:06:35,099 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.118328125
[2026-01-10 09:07:11] 2026-01-10 14:06:35,129 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6965384259/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:07:11] 2026-01-10 14:06:35,130 | INFO     | extracted standard info from prmon json
[2026-01-10 09:07:11] 2026-01-10 14:06:35,130 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:07:11] 2026-01-10 14:06:35,130 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:07:11] 2026-01-10 14:06:35,131 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:07:11] 2026-01-10 14:06:35,131 | INFO     | sum of square deviations: 12161768.264705881
[2026-01-10 09:07:11] 2026-01-10 14:06:35,131 | INFO     | sum of deviations: -8505579.411764383
[2026-01-10 09:07:11] 2026-01-10 14:06:35,131 | INFO     | mean x: 1768052825.8529413
[2026-01-10 09:07:11] 2026-01-10 14:06:35,132 | INFO     | mean y: 2666975.117647059
[2026-01-10 09:07:11] 2026-01-10 14:06:35,132 | INFO     | intersect: 1239190594.6416786
[2026-01-10 09:07:11] 2026-01-10 14:06:35,132 | INFO     | chi2: 0.18545033409499087
[2026-01-10 09:07:11] 2026-01-10 14:06:35,132 | INFO     | current memory leak: -0.70 B/s (using 34 data points, chi2=0.19)
[2026-01-10 09:07:11] 2026-01-10 14:06:35,132 | INFO     | could have reported an average CPU frequency of 3798 MHz (5 samples)
[2026-01-10 09:07:11] 2026-01-10 14:06:35,132 | INFO     | ..............................
[2026-01-10 09:07:11] 2026-01-10 14:06:35,132 | INFO     | . Timing measurements:
[2026-01-10 09:07:11] 2026-01-10 14:06:35,132 | INFO     | . get job = 0 s
[2026-01-10 09:07:11] 2026-01-10 14:06:35,132 | INFO     | . initial setup = 2 s
[2026-01-10 09:07:11] 2026-01-10 14:06:35,132 | INFO     | . payload setup = 19 s
[2026-01-10 09:07:11] 2026-01-10 14:06:35,132 | INFO     | . stage-in = 0 s
[2026-01-10 09:07:11] 2026-01-10 14:06:35,132 | INFO     | . payload execution = 2480 s
[2026-01-10 09:07:11] 2026-01-10 14:06:35,132 | INFO     | . stage-out = 0 s
[2026-01-10 09:07:11] 2026-01-10 14:06:35,132 | INFO     | . log creation = 0 s
[2026-01-10 09:07:11] 2026-01-10 14:06:35,133 | INFO     | ..............................
[2026-01-10 09:07:11] 2026-01-10 14:06:35,155 | INFO     | sufficient remaining disk space (170992336896 B)
[2026-01-10 09:07:11] 2026-01-10 14:06:35,155 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-10 09:07:11] 2026-01-10 14:06:35,162 | INFO     | size of work directory /tmp/boinchome/slots/3/PanDA_Pilot-6965384259: 7270801 B (within 4404019200 B limit)
[2026-01-10 09:07:11] 2026-01-10 14:06:35,162 | INFO     | pfn file=/tmp/boinchome/slots/3/PanDA_Pilot-6965384259/HITS.47962010._002400.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-10 09:07:11] 2026-01-10 14:06:35,162 | INFO     | total size of present files: 0 B (workdir size: 7270801 B)
[2026-01-10 09:07:11] 2026-01-10 14:06:35,162 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/3/PanDA_Pilot-6965384259/HITS.47962010._002400.pool.root.1 since it does not exist
[2026-01-10 09:07:11] 2026-01-10 14:06:35,343 | INFO     | 
[2026-01-10 09:07:11] 2026-01-10 14:06:35,347 | INFO     | job summary report
[2026-01-10 09:07:11] 2026-01-10 14:06:35,347 | INFO     | --------------------------------------------------
[2026-01-10 09:07:11] 2026-01-10 14:06:35,347 | INFO     | PanDA job id: 6965384259
[2026-01-10 09:07:11] 2026-01-10 14:06:35,347 | INFO     | task id: 47962010
[2026-01-10 09:07:11] 2026-01-10 14:06:35,347 | INFO     | errors: (none)
[2026-01-10 09:07:11] 2026-01-10 14:06:35,347 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:07:11] 2026-01-10 14:06:35,347 | INFO     | pilot state: finished 
[2026-01-10 09:07:11] 2026-01-10 14:06:35,347 | INFO     | transexitcode: 0
[2026-01-10 09:07:11] 2026-01-10 14:06:35,347 | INFO     | exeerrorcode: 0
[2026-01-10 09:07:11] 2026-01-10 14:06:35,347 | INFO     | exeerrordiag: 
[2026-01-10 09:07:11] 2026-01-10 14:06:35,347 | INFO     | exitcode: 0
[2026-01-10 09:07:11] 2026-01-10 14:06:35,347 | INFO     | exitmsg: OK
[2026-01-10 09:07:11] 2026-01-10 14:06:35,347 | INFO     | cpuconsumptiontime: 8685 s
[2026-01-10 09:07:11] 2026-01-10 14:06:35,347 | INFO     | nevents: 50
[2026-01-10 09:07:11] 2026-01-10 14:06:35,347 | INFO     | neventsw: 0
[2026-01-10 09:07:11] 2026-01-10 14:06:35,347 | INFO     | pid: 3103802
[2026-01-10 09:07:11] 2026-01-10 14:06:35,347 | INFO     | pgrp: 3103802
[2026-01-10 09:07:11] 2026-01-10 14:06:35,347 | INFO     | corecount: 9
[2026-01-10 09:07:11] 2026-01-10 14:06:35,351 | INFO     | event service: False
[2026-01-10 09:07:11] 2026-01-10 14:06:35,363 | INFO     | sizes: {0: 2284398, 1: 2284597, 11: 2284597, 15: 2284887, 22: 2284915, 2503: 2310887, 2504: 2319937, 2519: 2320187}
[2026-01-10 09:07:11] 2026-01-10 14:06:35,367 | INFO     | --------------------------------------------------
[2026-01-10 09:07:11] 2026-01-10 14:06:35,375 | INFO     | 
[2026-01-10 09:07:11] 2026-01-10 14:06:35,375 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 09:07:11] 2026-01-10 14:06:35,422 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:07:11] 2026-01-10 14:06:35,422 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:07:11] 2026-01-10 14:06:35,422 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:07:11] 2026-01-10 14:06:35,422 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:07:11] 2026-01-10 14:06:35,422 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:07:11] 2026-01-10 14:06:35,422 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:07:11] 2026-01-10 14:06:35,422 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:07:11] 2026-01-10 14:06:35,422 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:07:11] 2026-01-10 14:06:35,422 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:07:11] 2026-01-10 14:06:35,422 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:07:11] 2026-01-10 14:06:35,422 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:07:11] 2026-01-10 14:06:35,422 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:07:11] 2026-01-10 14:06:35,423 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:07:11] 2026-01-10 14:06:35,423 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:07:11] 2026-01-10 14:06:35,423 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:07:11] 2026-01-10 14:06:35,423 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:07:11] 2026-01-10 14:06:35,423 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:07:11] 2026-01-10 14:06:35,423 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:07:11] 2026-01-10 14:06:35,423 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:07:11] 2026-01-10 14:06:35,423 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:07:11] 2026-01-10 14:06:35,423 | INFO     | job 6965384259 has completed (purged errors)
[2026-01-10 09:07:11] 2026-01-10 14:06:35,423 | INFO     | overall cleanup function is called
[2026-01-10 09:07:11] 2026-01-10 14:06:36,104 | INFO     | number of running child processes to parent process 3103802: 1
[2026-01-10 09:07:11] 2026-01-10 14:06:36,105 | INFO     | maximum number of monitored processes: 17
[2026-01-10 09:07:11] 2026-01-10 14:06:36,105 | INFO     | aborting job monitoring since job object (job id=6965384259) has expired
[2026-01-10 09:07:11] 2026-01-10 14:06:36,499 | INFO     | --- collectZombieJob: --- 10, [3103802]
[2026-01-10 09:07:11] 2026-01-10 14:06:36,499 | INFO     | zombie collector waiting for pid 3103802
[2026-01-10 09:07:11] 2026-01-10 14:06:36,499 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:07:11] 2026-01-10 14:06:36,499 | INFO     | collected zombie processes
[2026-01-10 09:07:11] 2026-01-10 14:06:36,499 | INFO     | will attempt to kill all subprocesses of pid=3103802
[2026-01-10 09:07:11] 2026-01-10 14:06:38,087 | INFO     | process IDs to be killed: [3103802] (in reverse order)
[2026-01-10 09:07:11] 2026-01-10 14:06:38,297 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:07:11] 2026-01-10 14:06:38,298 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:07:11] 2026-01-10 14:06:38,322 | INFO     | did not find any defunct processes belonging to 3103802
[2026-01-10 09:07:11] 2026-01-10 14:06:38,344 | INFO     | did not find any defunct processes belonging to 3103802
[2026-01-10 09:07:11] 2026-01-10 14:06:38,344 | INFO     | ready for new job
[2026-01-10 09:07:11] 2026-01-10 14:06:38,345 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:07:11] 2026-01-10 14:06:38,358 | INFO     | ***************************************
[2026-01-10 09:07:11] 2026-01-10 14:06:38,358 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:07:11] 2026-01-10 14:06:38,358 | INFO     | ***************************************
[2026-01-10 09:07:11] 2026-01-10 14:06:38,358 | INFO     | 
[2026-01-10 09:07:11] 2026-01-10 14:06:38,377 | INFO     | architecture information:
[2026-01-10 09:07:11] 2026-01-10 14:06:38,384 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:07:11] 2026-01-10 14:06:38,433 | INFO     | cat /etc/os-release:
[2026-01-10 09:07:11] NAME="CentOS Linux"
[2026-01-10 09:07:11] VERSION="7 (Core)"
[2026-01-10 09:07:11] ID="centos"
[2026-01-10 09:07:11] ID_LIKE="rhel fedora"
[2026-01-10 09:07:11] VERSION_ID="7"
[2026-01-10 09:07:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:07:11] ANSI_COLOR="0;31"
[2026-01-10 09:07:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:07:11] HOME_URL="https://www.centos.org/"
[2026-01-10 09:07:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:07:11] 
[2026-01-10 09:07:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:07:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:07:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:07:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:07:11] 
[2026-01-10 09:07:11] 2026-01-10 14:06:38,433 | INFO     | ***************************************
[2026-01-10 09:07:11] 2026-01-10 14:06:38,936 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 09:07:11] 2026-01-10 14:06:38,963 | INFO     | sufficient remaining disk space (170999676928 B)
[2026-01-10 09:07:11] 2026-01-10 14:06:38,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:07:11] 2026-01-10 14:06:38,964 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:07:11] 2026-01-10 14:06:38,964 | INFO     | update_server=False
[2026-01-10 09:07:11] 2026-01-10 14:06:38,964 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:07:11] 2026-01-10 14:06:38,965 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:07:11] 2026-01-10 14:06:39,167 | INFO     | all data control threads have been joined
[2026-01-10 09:07:11] 2026-01-10 14:06:39,168 | INFO     | all payload control threads have been joined
[2026-01-10 09:07:11] 2026-01-10 14:06:39,310 | INFO     | all job control threads have been joined
[2026-01-10 09:07:11] 2026-01-10 14:06:39,616 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:07:11] 2026-01-10 14:06:39,616 | INFO     | aborting loop
[2026-01-10 09:07:11] 2026-01-10 14:06:39,632 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:07:11] 2026-01-10 14:06:39,969 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:07:11] 2026-01-10 14:06:40,001 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:07:11] 2026-01-10 14:06:40,173 | INFO     | [data] control thread has finished
[2026-01-10 09:07:11] 2026-01-10 14:06:40,174 | INFO     | [payload] control thread has finished
[2026-01-10 09:07:11] 2026-01-10 14:06:40,233 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:07:11] 2026-01-10 14:06:40,316 | INFO     | [job] control thread has finished
[2026-01-10 09:07:11] 2026-01-10 14:06:40,365 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:07:11] 2026-01-10 14:06:40,422 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:07:11] 2026-01-10 14:06:40,617 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:07:11] 2026-01-10 14:06:40,622 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:07:11] 2026-01-10 14:06:40,781 | INFO     | [job] validate thread has finished
[2026-01-10 09:07:11] 2026-01-10 14:06:40,952 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:07:11] 2026-01-10 14:06:40,972 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:07:11] 2026-01-10 14:06:41,076 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:07:11] 2026-01-10 14:06:41,371 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:07:11] 2026-01-10 14:06:41,477 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:07:11] 2026-01-10 14:06:43,641 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:07:11] 2026-01-10 14:07:04,048 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:07:11] 2026-01-10 14:07:05,338 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139765626013504)>', '<ExcThread(monitor, started 139765005412096)>']
[2026-01-10 09:07:11] 2026-01-10 14:07:08,545 | INFO     | PID=3072781 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:07:11] 2026-01-10 14:07:08,546 | INFO     | .. there are 20 such processes running
[2026-01-10 09:07:11] 2026-01-10 14:07:08,546 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:07:11] 2026-01-10 14:07:08,546 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:07:11] 2026-01-10 14:07:08,546 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:07:11] 2026-01-10 14:07:08,546 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:07:11] 2026-01-10 14:07:08,546 | INFO     | [monitor] control thread has ended
[2026-01-10 09:07:11] 2026-01-10 14:07:10,364 | INFO     | all workflow threads have been joined
[2026-01-10 09:07:11] 2026-01-10 14:07:10,364 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:07:11] 2026-01-10 14:07:10,364 | INFO     | traces error code: 0
[2026-01-10 09:07:11] 2026-01-10 14:07:10,364 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:07:11] 2026-01-10 14:07:10,680 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:07:11] 2026-01-10 14:07:10,699 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:07:11] 2026-01-10 14:07:10,740 [wrapper] pilotpid: 3072781
[2026-01-10 09:07:11] 2026-01-10 14:07:10,756 [wrapper] Pilot exit status: 0
[2026-01-10 09:07:11] 2026-01-10 14:07:10,823 [wrapper] pandaids: 6965384259
[2026-01-10 09:07:11] 2026-01-10 14:07:10,997 [wrapper] cleanup supervisor_pilot 3468744 3072782
[2026-01-10 09:07:11] 2026-01-10 14:07:11,006 [wrapper] Test setup, not cleaning
[2026-01-10 09:07:11] 2026-01-10 14:07:11,021 [wrapper] apfmon messages muted
[2026-01-10 09:07:11] 2026-01-10 14:07:11,037 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:07:11] 2026-01-10 14:07:11,044 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:07:11]  *** Error codes and diagnostics ***
[2026-01-10 09:07:11]     "exeErrorCode": 0,
[2026-01-10 09:07:11]     "exeErrorDiag": "",
[2026-01-10 09:07:11]     "pilotErrorCode": 0,
[2026-01-10 09:07:11]     "pilotErrorDiag": "",
[2026-01-10 09:07:11]  *** Listing of results directory ***
[2026-01-10 09:07:11] total 434024
[2026-01-10 09:07:11] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:07:11] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:07:11] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:15 queuedata.json
[2026-01-10 09:07:11] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:07:11] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:23 run_atlas
[2026-01-10 09:07:11] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:23 job.xml
[2026-01-10 09:07:11] -rw-r--r--. 2 boincer umatlas 392228514 Jan 10 08:23 EVNT.47962006._000099.pool.root.1
[2026-01-10 09:07:11] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:23 start_atlas.sh
[2026-01-10 09:07:11] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:23 shared
[2026-01-10 09:07:11] -rw-r--r--. 2 boincer umatlas    592619 Jan 10 08:23 input.tar.gz
[2026-01-10 09:07:11] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:23 boinc_lockfile
[2026-01-10 09:07:11] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 08:23 pandaJob.out
[2026-01-10 09:07:11] -rw-------. 1 boincer umatlas        57 Jan 10 08:23 setup.sh.local
[2026-01-10 09:07:11] -rw-------. 1 boincer umatlas    989556 Jan 10 08:23 agis_schedconf.cvmfs.json
[2026-01-10 09:07:11] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:23 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:07:11] drwx------. 5 boincer umatlas      4096 Jan 10 08:24 pilot3
[2026-01-10 09:07:11] -rw-r--r--. 1 boincer umatlas       529 Jan 10 09:00 boinc_task_state.xml
[2026-01-10 09:07:11] -rw-r--r--. 1 boincer umatlas      7172 Jan 10 09:04 init_data.xml
[2026-01-10 09:07:11] -rw-------. 1 boincer umatlas  45031084 Jan 10 09:06 HITS.47962010._002400.pool.root.1
[2026-01-10 09:07:11] -rw-------. 1 boincer umatlas      1032 Jan 10 09:06 memory_monitor_summary.json
[2026-01-10 09:07:11] -rw-------. 1 boincer umatlas   1251980 Jan 10 09:06 log.47962010._002400.job.log.tgz.1
[2026-01-10 09:07:11] -rw-------. 1 boincer umatlas      8519 Jan 10 09:06 heartbeat.json
[2026-01-10 09:07:11] -rw-------. 1 boincer umatlas        95 Jan 10 09:07 pilot_heartbeat.json
[2026-01-10 09:07:11] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:07 boinc_mmap_file
[2026-01-10 09:07:11] -rw-------. 1 boincer umatlas      4825 Jan 10 09:07 pilotlog.txt
[2026-01-10 09:07:11] -rw-r--r--. 1 boincer umatlas        26 Jan 10 09:07 wrapper_checkpoint.txt
[2026-01-10 09:07:11] -rw-------. 1 boincer umatlas    381659 Jan 10 09:07 log.47962010._002400.job.log.1
[2026-01-10 09:07:11] -rw-------. 1 boincer umatlas       353 Jan 10 09:07 output.list
[2026-01-10 09:07:11] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:07 runtime_log
[2026-01-10 09:07:11] -rw-------. 1 boincer umatlas   1648640 Jan 10 09:07 result.tar.gz
[2026-01-10 09:07:11] -rw-------. 1 boincer umatlas       647 Jan 10 09:07 UsNLDmayny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLahKDmbJ3Ldm.diag
[2026-01-10 09:07:11] -rw-r--r--. 1 boincer umatlas      9337 Jan 10 09:07 runtime_log.err
[2026-01-10 09:07:11] -rw-r--r--. 1 boincer umatlas     22611 Jan 10 09:07 stderr.txt
[2026-01-10 09:07:11] HITS file was successfully produced:
[2026-01-10 09:07:11] -rw-------. 1 boincer umatlas 45031084 Jan 10 09:06 shared/HITS.pool.root.1
[2026-01-10 09:07:11]  *** Contents of shared directory: ***
[2026-01-10 09:07:11] total 429224
[2026-01-10 09:07:11] -rw-r--r--. 2 boincer umatlas 392228514 Jan 10 08:23 ATLAS.root_0
[2026-01-10 09:07:11] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:23 start_atlas.sh
[2026-01-10 09:07:11] -rw-r--r--. 2 boincer umatlas    592619 Jan 10 08:23 input.tar.gz
[2026-01-10 09:07:11] -rw-------. 1 boincer umatlas  45031084 Jan 10 09:06 HITS.pool.root.1
[2026-01-10 09:07:11] -rw-------. 1 boincer umatlas   1648640 Jan 10 09:07 result.tar.gz
09:07:12 (3052764): run_atlas exited; CPU time 8710.627082
09:07:12 (3052764): called boinc_finish(0)

</stderr_txt>
]]>

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