Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
16:43:09 (2214743): wrapper (7.7.26015): starting
16:43:09 (2214743): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 16:43:09] Arguments: --nthreads 4
[2026-01-10 16:43:09] Threads: 4
[2026-01-10 16:43:09] Checking for CVMFS
[2026-01-10 16:43:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 16:43:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 16:43:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 16:43:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 16:43:10] 2.13.3.0 355230 4336 56252 154992 3 92 2770240 4096001 6022 130560 0 17052624 99.986 307134 4178 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-10 16:43:10] CVMFS is ok
[2026-01-10 16:43:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 16:43:10] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-10 16:43:10] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-10 16:43:10] Further information can be found at the LHC@home message board.
[2026-01-10 16:43:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 16:43:10] Checking for apptainer binary...
[2026-01-10 16:43:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 16:43:10] Running /usr/bin/apptainer --version
[2026-01-10 16:43:10] apptainer version 1.4.5
[2026-01-10 16:43:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 16:43:10] X-32-ubuntu
[2026-01-10 16:43:10] apptainer works
[2026-01-10 16:43:10] Set ATHENA_PROC_NUMBER=4
[2026-01-10 16:43:10] Set ATHENA_CORE_NUMBER=4
[2026-01-10 16:43:10] Starting ATLAS job with PandaID=6965384286
[2026-01-10 16:43:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 17:26:27]  *** The last 200 lines of the pilot log: ***
[2026-01-10 17:26:27]  protocol_id=None
[2026-01-10 17:26:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 17:26:27]  replicas=None
[2026-01-10 17:26:27]  scope=mc16_13TeV
[2026-01-10 17:26:27]  status=None
[2026-01-10 17:26:27]  status_code=0
[2026-01-10 17:26:27]  storage_token=
[2026-01-10 17:26:27]  surl=/var/lib/boinc/slots/3/PanDA_Pilot-6965384286/log.47962010._002427.job.log.tgz.1
[2026-01-10 17:26:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/12/77/log.47962010._002427.job.log.tgz.1
[2026-01-10 17:26:27]  workdir=None
[2026-01-10 17:26:27] ]
[2026-01-10 17:26:27] 2026-01-10 22:25:28,110 | INFO     | transferring file log.47962010._002427.job.log.tgz.1 from /var/lib/boinc/slots/3/PanDA_Pilot-6965384286/log.47962010._002427.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-10 17:26:27] 2026-01-10 22:25:28,110 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/3/PanDA_Pilot-6965384286/log.47962010._002427.job.log.tgz.1 /var/lib/boinc/slots/3/log.47962010._002427.job
[2026-01-10 17:26:27] 2026-01-10 22:25:28,126 | INFO     | adding to output.list: log.47962010._002427.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/12/77/log.47962010._002427.job.log.tgz.
[2026-01-10 17:26:27] 2026-01-10 22:25:28,127 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 17:26:27] 2026-01-10 22:25:28,127 | INFO     | summary of transferred files:
[2026-01-10 17:26:27] 2026-01-10 22:25:28,127 | INFO     |  -- lfn=log.47962010._002427.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 17:26:27] 2026-01-10 22:25:28,127 | INFO     | stage-out finished correctly
[2026-01-10 17:26:27] 2026-01-10 22:25:28,235 | INFO     | time since job start (2530s) is within the limit (349056.0s)
[2026-01-10 17:26:27] 2026-01-10 22:25:29,861 | INFO     | monitor loop #194: job 0:6965384286 is in state 'finished'
[2026-01-10 17:26:27] 2026-01-10 22:25:29,861 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 17:26:27] 2026-01-10 22:25:30,237 | INFO     | time since job start (2532s) is within the limit (349056.0s)
[2026-01-10 17:26:27] 2026-01-10 22:25:31,681 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 17:26:27] 2026-01-10 22:25:32,242 | INFO     | time since job start (2534s) is within the limit (349056.0s)
[2026-01-10 17:26:27] 2026-01-10 22:25:32,364 | INFO     | monitor loop #195: job 0:6965384286 is in state 'finished'
[2026-01-10 17:26:27] 2026-01-10 22:25:32,364 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 17:26:27] 2026-01-10 22:25:32,656 | INFO     | job 6965384286 has state=finished
[2026-01-10 17:26:27] 2026-01-10 22:25:32,656 | INFO     | preparing for final server update for job 6965384286 in state='finished'
[2026-01-10 17:26:27] 2026-01-10 22:25:32,775 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-10 17:26:27] 2026-01-10 22:25:32,775 | INFO     | this job has now completed (state=finished)
[2026-01-10 17:26:27] 2026-01-10 22:25:32,775 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 17:26:27] 2026-01-10 22:25:32,775 | INFO     | log transfer has been attempted: DONE
[2026-01-10 17:26:27] 2026-01-10 22:25:32,775 | INFO     | job 6965384286 has finished - writing final server update
[2026-01-10 17:26:27] 2026-01-10 22:25:32,775 | INFO     | total number of processed events: 50 (read)
[2026-01-10 17:26:27] 2026-01-10 22:25:32,777 | INFO     | executing command: lscpu
[2026-01-10 17:26:27] 2026-01-10 22:25:32,806 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 17:26:27] 2026-01-10 22:25:34,248 | INFO     | time since job start (2536s) is within the limit (349056.0s)
[2026-01-10 17:26:27] 2026-01-10 22:25:34,867 | INFO     | monitor loop #196: job 0:6965384286 is in state 'finished'
[2026-01-10 17:26:27] 2026-01-10 22:25:34,867 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 17:26:27] 2026-01-10 22:25:35,576 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 17:26:27] 2026-01-10 22:25:35,580 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3772.3909062499997
[2026-01-10 17:26:27] 2026-01-10 22:25:35,585 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6965384286/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 17:26:27] 2026-01-10 22:25:35,585 | INFO     | extracted standard info from prmon json
[2026-01-10 17:26:27] 2026-01-10 22:25:35,585 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 17:26:27] 2026-01-10 22:25:35,585 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 17:26:27] 2026-01-10 22:25:35,586 | INFO     | fitting pss+swap vs Time
[2026-01-10 17:26:27] 2026-01-10 22:25:35,587 | INFO     | sum of square deviations: 13283970.0
[2026-01-10 17:26:27] 2026-01-10 22:25:35,587 | INFO     | sum of deviations: 214154102.99999988
[2026-01-10 17:26:27] 2026-01-10 22:25:35,587 | INFO     | mean x: 1768082764.0
[2026-01-10 17:26:27] 2026-01-10 22:25:35,587 | INFO     | mean y: 2091110.6857142858
[2026-01-10 17:26:27] 2026-01-10 22:25:35,587 | INFO     | intersect: -28501600056.501537
[2026-01-10 17:26:27] 2026-01-10 22:25:35,587 | INFO     | chi2: 0.028443654426900212
[2026-01-10 17:26:27] 2026-01-10 22:25:35,587 | INFO     | current memory leak: 16.12 B/s (using 35 data points, chi2=0.03)
[2026-01-10 17:26:27] 2026-01-10 22:25:35,587 | INFO     | could have reported an average CPU frequency of 3812 MHz (5 samples)
[2026-01-10 17:26:27] 2026-01-10 22:25:35,587 | INFO     | ..............................
[2026-01-10 17:26:27] 2026-01-10 22:25:35,588 | INFO     | . Timing measurements:
[2026-01-10 17:26:27] 2026-01-10 22:25:35,588 | INFO     | . get job = 0 s
[2026-01-10 17:26:27] 2026-01-10 22:25:35,588 | INFO     | . initial setup = 2 s
[2026-01-10 17:26:27] 2026-01-10 22:25:35,588 | INFO     | . payload setup = 4 s
[2026-01-10 17:26:27] 2026-01-10 22:25:35,588 | INFO     | . stage-in = 0 s
[2026-01-10 17:26:27] 2026-01-10 22:25:35,588 | INFO     | . payload execution = 2506 s
[2026-01-10 17:26:27] 2026-01-10 22:25:35,588 | INFO     | . stage-out = 0 s
[2026-01-10 17:26:27] 2026-01-10 22:25:35,588 | INFO     | . log creation = 0 s
[2026-01-10 17:26:27] 2026-01-10 22:25:35,588 | INFO     | ..............................
[2026-01-10 17:26:27] 2026-01-10 22:25:35,655 | INFO     | 
[2026-01-10 17:26:27] 2026-01-10 22:25:35,656 | INFO     | job summary report
[2026-01-10 17:26:27] 2026-01-10 22:25:35,656 | INFO     | --------------------------------------------------
[2026-01-10 17:26:27] 2026-01-10 22:25:35,656 | INFO     | PanDA job id: 6965384286
[2026-01-10 17:26:27] 2026-01-10 22:25:35,656 | INFO     | task id: 47962010
[2026-01-10 17:26:27] 2026-01-10 22:25:35,656 | INFO     | errors: (none)
[2026-01-10 17:26:27] 2026-01-10 22:25:35,656 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 17:26:27] 2026-01-10 22:25:35,656 | INFO     | pilot state: finished 
[2026-01-10 17:26:27] 2026-01-10 22:25:35,656 | INFO     | transexitcode: 0
[2026-01-10 17:26:27] 2026-01-10 22:25:35,656 | INFO     | exeerrorcode: 0
[2026-01-10 17:26:27] 2026-01-10 22:25:35,656 | INFO     | exeerrordiag: 
[2026-01-10 17:26:27] 2026-01-10 22:25:35,656 | INFO     | exitcode: 0
[2026-01-10 17:26:27] 2026-01-10 22:25:35,656 | INFO     | exitmsg: OK
[2026-01-10 17:26:27] 2026-01-10 22:25:35,656 | INFO     | cpuconsumptiontime: 8785 s
[2026-01-10 17:26:27] 2026-01-10 22:25:35,656 | INFO     | nevents: 50
[2026-01-10 17:26:27] 2026-01-10 22:25:35,656 | INFO     | neventsw: 0
[2026-01-10 17:26:27] 2026-01-10 22:25:35,656 | INFO     | pid: 2225264
[2026-01-10 17:26:27] 2026-01-10 22:25:35,656 | INFO     | pgrp: 2225264
[2026-01-10 17:26:27] 2026-01-10 22:25:35,656 | INFO     | corecount: 4
[2026-01-10 17:26:27] 2026-01-10 22:25:35,656 | INFO     | event service: False
[2026-01-10 17:26:27] 2026-01-10 22:25:35,656 | INFO     | sizes: {0: 2284569, 4: 2284831, 11: 2284859, 2514: 2310825, 2515: 2319819, 2518: 2319875, 2522: 2320281}
[2026-01-10 17:26:27] 2026-01-10 22:25:35,657 | INFO     | --------------------------------------------------
[2026-01-10 17:26:27] 2026-01-10 22:25:35,657 | INFO     | 
[2026-01-10 17:26:27] 2026-01-10 22:25:35,657 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-10 17:26:27] 2026-01-10 22:25:35,673 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 17:26:27] 2026-01-10 22:25:35,673 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 17:26:27] 2026-01-10 22:25:35,673 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 17:26:27] 2026-01-10 22:25:35,674 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 17:26:27] 2026-01-10 22:25:35,674 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 17:26:27] 2026-01-10 22:25:35,674 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 17:26:27] 2026-01-10 22:25:35,674 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 17:26:27] 2026-01-10 22:25:35,674 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 17:26:27] 2026-01-10 22:25:35,674 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 17:26:27] 2026-01-10 22:25:35,674 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 17:26:27] 2026-01-10 22:25:35,674 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 17:26:27] 2026-01-10 22:25:35,674 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 17:26:27] 2026-01-10 22:25:35,674 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 17:26:27] 2026-01-10 22:25:35,674 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 17:26:27] 2026-01-10 22:25:35,674 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 17:26:27] 2026-01-10 22:25:35,674 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 17:26:27] 2026-01-10 22:25:35,674 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 17:26:27] 2026-01-10 22:25:35,674 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 17:26:27] 2026-01-10 22:25:35,674 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 17:26:27] 2026-01-10 22:25:35,674 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 17:26:27] 2026-01-10 22:25:35,675 | INFO     | job 6965384286 has completed (purged errors)
[2026-01-10 17:26:27] 2026-01-10 22:25:35,675 | INFO     | overall cleanup function is called
[2026-01-10 17:26:27] 2026-01-10 22:25:36,681 | INFO     | --- collectZombieJob: --- 10, [2225264]
[2026-01-10 17:26:27] 2026-01-10 22:25:36,682 | INFO     | zombie collector waiting for pid 2225264
[2026-01-10 17:26:27] 2026-01-10 22:25:36,682 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 17:26:27] 2026-01-10 22:25:36,682 | INFO     | collected zombie processes
[2026-01-10 17:26:27] 2026-01-10 22:25:36,682 | INFO     | will attempt to kill all subprocesses of pid=2225264
[2026-01-10 17:26:27] 2026-01-10 22:25:36,836 | INFO     | process IDs to be killed: [2225264] (in reverse order)
[2026-01-10 17:26:27] 2026-01-10 22:25:36,893 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 17:26:27] 2026-01-10 22:25:36,894 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 17:26:27] 2026-01-10 22:25:36,899 | INFO     | did not find any defunct processes belonging to 2225264
[2026-01-10 17:26:27] 2026-01-10 22:25:36,903 | INFO     | did not find any defunct processes belonging to 2225264
[2026-01-10 17:26:27] 2026-01-10 22:25:36,903 | INFO     | ready for new job
[2026-01-10 17:26:27] 2026-01-10 22:25:36,903 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 17:26:27] 2026-01-10 22:25:36,904 | INFO     | ***************************************
[2026-01-10 17:26:27] 2026-01-10 22:25:36,904 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 17:26:27] 2026-01-10 22:25:36,904 | INFO     | ***************************************
[2026-01-10 17:26:27] 2026-01-10 22:25:36,905 | INFO     | 
[2026-01-10 17:26:27] 2026-01-10 22:25:36,906 | INFO     | architecture information:
[2026-01-10 17:26:27] 2026-01-10 22:25:36,906 | INFO     | executing command: cat /etc/os-release
[2026-01-10 17:26:27] 2026-01-10 22:25:36,918 | INFO     | cat /etc/os-release:
[2026-01-10 17:26:27] NAME="CentOS Linux"
[2026-01-10 17:26:27] VERSION="7 (Core)"
[2026-01-10 17:26:27] ID="centos"
[2026-01-10 17:26:27] ID_LIKE="rhel fedora"
[2026-01-10 17:26:27] VERSION_ID="7"
[2026-01-10 17:26:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 17:26:27] ANSI_COLOR="0;31"
[2026-01-10 17:26:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 17:26:27] HOME_URL="https://www.centos.org/"
[2026-01-10 17:26:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 17:26:27] 
[2026-01-10 17:26:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 17:26:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 17:26:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 17:26:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 17:26:27] 
[2026-01-10 17:26:27] 2026-01-10 22:25:36,918 | INFO     | ***************************************
[2026-01-10 17:26:27] 2026-01-10 22:25:37,421 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-10 17:26:27] 2026-01-10 22:25:37,432 | INFO     | sufficient remaining disk space (1800980660224 B)
[2026-01-10 17:26:27] 2026-01-10 22:25:37,432 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 17:26:27] 2026-01-10 22:25:37,432 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 17:26:27] 2026-01-10 22:25:37,432 | INFO     | update_server=False
[2026-01-10 17:26:27] 2026-01-10 22:25:37,432 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 17:26:27] 2026-01-10 22:25:37,433 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:26:27] 2026-01-10 22:25:37,725 | INFO     | all payload control threads have been joined
[2026-01-10 17:26:27] 2026-01-10 22:25:37,751 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 17:26:27] 2026-01-10 22:25:37,952 | INFO     | all data control threads have been joined
[2026-01-10 17:26:27] 2026-01-10 22:25:38,375 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:26:27] 2026-01-10 22:25:38,375 | INFO     | aborting loop
[2026-01-10 17:26:27] 2026-01-10 22:25:38,438 | INFO     | [job] queue monitor thread has finished
[2026-01-10 17:26:27] 2026-01-10 22:25:38,438 | INFO     | [job] retrieve thread has finished
[2026-01-10 17:26:27] 2026-01-10 22:25:38,540 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 17:26:27] 2026-01-10 22:25:38,705 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 17:26:27] 2026-01-10 22:25:38,730 | INFO     | [payload] control thread has finished
[2026-01-10 17:26:27] 2026-01-10 22:25:38,806 | INFO     | [data] copytool_in thread has finished
[2026-01-10 17:26:27] 2026-01-10 22:25:38,958 | INFO     | [data] control thread has finished
[2026-01-10 17:26:27] 2026-01-10 22:25:39,028 | INFO     | [payload] failed_post thread has finished
[2026-01-10 17:26:27] 2026-01-10 22:25:39,068 | INFO     | all job control threads have been joined
[2026-01-10 17:26:27] 2026-01-10 22:25:39,331 | INFO     | [job] validate thread has finished
[2026-01-10 17:26:27] 2026-01-10 22:25:39,380 | INFO     | [job] job monitor thread has finished
[2026-01-10 17:26:27] 2026-01-10 22:25:39,527 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 17:26:27] 2026-01-10 22:25:39,622 | INFO     | [payload] validate_post thread has finished
[2026-01-10 17:26:27] 2026-01-10 22:25:39,734 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 17:26:27] 2026-01-10 22:25:40,074 | INFO     | [job] control thread has finished
[2026-01-10 17:26:27] 2026-01-10 22:25:40,711 | INFO     | [data] copytool_out thread has finished
[2026-01-10 17:26:27] 2026-01-10 22:25:41,757 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 17:26:27] 2026-01-10 22:25:48,252 | INFO     | job.realtimelogging is not enabled
[2026-01-10 17:26:27] 2026-01-10 22:25:49,257 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 17:26:27] 2026-01-10 22:26:07,493 | INFO     | PID=2218592 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 17:26:27] 2026-01-10 22:26:07,493 | INFO     | .. there are 6 such processes running
[2026-01-10 17:26:27] 2026-01-10 22:26:07,494 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 17:26:27] 2026-01-10 22:26:07,494 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 17:26:27] 2026-01-10 22:26:07,494 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 17:26:27] 2026-01-10 22:26:22,306 | INFO     | [monitor] cgroup control has ended
[2026-01-10 17:26:27] 2026-01-10 22:26:22,417 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129798301501248)>', '<ExcThread(monitor, started 129797501990656)>']
[2026-01-10 17:26:27] 2026-01-10 22:26:22,556 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 17:26:27] 2026-01-10 22:26:22,556 | INFO     | [monitor] control thread has ended
[2026-01-10 17:26:27] 2026-01-10 22:26:27,430 | INFO     | all workflow threads have been joined
[2026-01-10 17:26:27] 2026-01-10 22:26:27,430 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 17:26:27] 2026-01-10 22:26:27,430 | INFO     | traces error code: 0
[2026-01-10 17:26:27] 2026-01-10 22:26:27,430 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 17:26:27] 2026-01-10 22:26:27,501 [wrapper] ==== pilot stdout END ====
[2026-01-10 17:26:27] 2026-01-10 22:26:27,503 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 17:26:27] 2026-01-10 22:26:27,504 [wrapper] pilotpid: 2218592
[2026-01-10 17:26:27] 2026-01-10 22:26:27,506 [wrapper] Pilot exit status: 0
[2026-01-10 17:26:27] 2026-01-10 22:26:27,513 [wrapper] pandaids: 6965384286
[2026-01-10 17:26:27] 2026-01-10 22:26:27,551 [wrapper] cleanup supervisor_pilot 2343591 2218593
[2026-01-10 17:26:27] 2026-01-10 22:26:27,553 [wrapper] Test setup, not cleaning
[2026-01-10 17:26:27] 2026-01-10 22:26:27,555 [wrapper] apfmon messages muted
[2026-01-10 17:26:27] 2026-01-10 22:26:27,557 [wrapper] ==== wrapper stdout END ====
[2026-01-10 17:26:27] 2026-01-10 22:26:27,558 [wrapper] ==== wrapper stderr END ====
[2026-01-10 17:26:27]  *** Error codes and diagnostics ***
[2026-01-10 17:26:27]     "exeErrorCode": 0,
[2026-01-10 17:26:27]     "exeErrorDiag": "",
[2026-01-10 17:26:27]     "pilotErrorCode": 0,
[2026-01-10 17:26:27]     "pilotErrorDiag": "",
[2026-01-10 17:26:27]  *** Listing of results directory ***
[2026-01-10 17:26:27] total 433504
[2026-01-10 17:26:27] -rw-r--r-- 1 boinc boinc    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 17:26:27] -rwx------ 1 boinc boinc     36322 Jan 10 08:11 runpilot2-wrapper.sh
[2026-01-10 17:26:27] -rw-r--r-- 1 boinc boinc      5112 Jan 10 08:11 queuedata.json
[2026-01-10 17:26:27] -rw-r--r-- 1 boinc boinc       100 Jan 10 16:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 17:26:27] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 16:43 run_atlas
[2026-01-10 17:26:27] -rw-r--r-- 1 boinc boinc       105 Jan 10 16:43 job.xml
[2026-01-10 17:26:27] -rw-r--r-- 1 boinc boinc      9667 Jan 10 16:43 init_data.xml
[2026-01-10 17:26:27] -rw-r--r-- 2 boinc boinc 392707608 Jan 10 16:43 EVNT.47962006._000106.pool.root.1
[2026-01-10 17:26:27] -rw-r--r-- 2 boinc boinc     15847 Jan 10 16:43 start_atlas.sh
[2026-01-10 17:26:27] drwxrwx--x 2 boinc boinc      4096 Jan 10 16:43 shared
[2026-01-10 17:26:27] -rw-r--r-- 2 boinc boinc    592618 Jan 10 16:43 input.tar.gz
[2026-01-10 17:26:27] -rw-r--r-- 1 boinc boinc         0 Jan 10 16:43 boinc_lockfile
[2026-01-10 17:26:27] -rw-r--r-- 1 boinc boinc      2890 Jan 10 16:43 pandaJob.out
[2026-01-10 17:26:27] -rw------- 1 boinc boinc    989548 Jan 10 16:43 agis_schedconf.cvmfs.json
[2026-01-10 17:26:27] -rw------- 1 boinc boinc   1516240 Jan 10 16:43 agis_ddmendpoints.agis.ALL.json
[2026-01-10 17:26:27] drwx------ 5 boinc boinc      4096 Jan 10 16:43 pilot3
[2026-01-10 17:26:27] -rw-r--r-- 1 boinc boinc       528 Jan 10 17:21 boinc_task_state.xml
[2026-01-10 17:26:27] -rw------- 1 boinc boinc  45000729 Jan 10 17:25 HITS.47962010._002427.pool.root.1
[2026-01-10 17:26:27] -rw------- 1 boinc boinc      1018 Jan 10 17:25 memory_monitor_summary.json
[2026-01-10 17:26:27] -rw------- 1 boinc boinc    733572 Jan 10 17:25 log.47962010._002427.job.log.tgz.1
[2026-01-10 17:26:27] -rw------- 1 boinc boinc      8508 Jan 10 17:25 heartbeat.json
[2026-01-10 17:26:27] -rw------- 1 boinc boinc        95 Jan 10 17:26 pilot_heartbeat.json
[2026-01-10 17:26:27] -rw-r--r-- 1 boinc boinc      8192 Jan 10 17:26 boinc_mmap_file
[2026-01-10 17:26:27] -rw-r--r-- 1 boinc boinc        26 Jan 10 17:26 wrapper_checkpoint.txt
[2026-01-10 17:26:27] -rw------- 1 boinc boinc      4897 Jan 10 17:26 pilotlog.txt
[2026-01-10 17:26:27] -rw------- 1 boinc boinc    409005 Jan 10 17:26 log.47962010._002427.job.log.1
[2026-01-10 17:26:27] -rw------- 1 boinc boinc       353 Jan 10 17:26 output.list
[2026-01-10 17:26:27] -rw-r--r-- 1 boinc boinc       620 Jan 10 17:26 runtime_log
[2026-01-10 17:26:27] -rw------- 1 boinc boinc   1157120 Jan 10 17:26 result.tar.gz
[2026-01-10 17:26:27] -rw-r--r-- 1 boinc boinc      8785 Jan 10 17:26 runtime_log.err
[2026-01-10 17:26:27] -rw------- 1 boinc boinc       644 Jan 10 17:26 964MDmLvny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxVhKDmBSFXNn.diag
[2026-01-10 17:26:27] -rw-r--r-- 1 boinc boinc     21915 Jan 10 17:26 stderr.txt
[2026-01-10 17:26:27] HITS file was successfully produced:
[2026-01-10 17:26:27] -rw------- 1 boinc boinc 45000729 Jan 10 17:25 shared/HITS.pool.root.1
[2026-01-10 17:26:27]  *** Contents of shared directory: ***
[2026-01-10 17:26:27] total 429184
[2026-01-10 17:26:27] -rw-r--r-- 2 boinc boinc 392707608 Jan 10 16:43 ATLAS.root_0
[2026-01-10 17:26:27] -rw-r--r-- 2 boinc boinc     15847 Jan 10 16:43 start_atlas.sh
[2026-01-10 17:26:27] -rw-r--r-- 2 boinc boinc    592618 Jan 10 16:43 input.tar.gz
[2026-01-10 17:26:27] -rw------- 1 boinc boinc  45000729 Jan 10 17:25 HITS.pool.root.1
[2026-01-10 17:26:27] -rw------- 1 boinc boinc   1157120 Jan 10 17:26 result.tar.gz
17:26:29 (2214743): run_atlas exited; CPU time 8775.379084
17:26:29 (2214743): called boinc_finish(0)

</stderr_txt>
]]>

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