Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:23:31 (853769): wrapper (7.7.26015): starting
08:23:31 (853769): wrapper: running run_atlas (--nthreads 10)
[2026-01-10 08:23:31] Arguments: --nthreads 10
[2026-01-10 08:23:31] Threads: 10
[2026-01-10 08:23:31] Checking for CVMFS
[2026-01-10 08:23:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:23:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:23:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:23:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:23:31] 2.13.3.0 9601 34174 253396 154981 0 313 30428236 32935936 10513 16776704 0 27496841 99.750 36385428 43704 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:23:31] CVMFS is ok
[2026-01-10 08:23:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:23:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:23:31] Further information can be found at the LHC@home message board.
[2026-01-10 08:23:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:23:31] Checking for apptainer binary...
[2026-01-10 08:23:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:23:31] Running /usr/bin/apptainer --version
[2026-01-10 08:23:31] apptainer version 1.4.5-2.el9
[2026-01-10 08:23:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:23:32] c6-5-7-2.aglt2.org
[2026-01-10 08:23:32] apptainer works
[2026-01-10 08:23:32] Set ATHENA_PROC_NUMBER=10
[2026-01-10 08:23:32] Set ATHENA_CORE_NUMBER=10
[2026-01-10 08:23:32] Starting ATLAS job with PandaID=6965384131
[2026-01-10 08:23:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:29:55]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:29:55] 2026-01-10 14:28:44,570 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:29:55] 2026-01-10 14:28:44,570 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:29:55] 2026-01-10 14:28:44,570 | INFO     | job 6965384131 has finished - writing final server update
[2026-01-10 09:29:55] 2026-01-10 14:28:44,570 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:29:55] 2026-01-10 14:28:44,584 | INFO     | executing command: lscpu
[2026-01-10 09:29:55] 2026-01-10 14:28:44,695 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:29:55] 2026-01-10 14:28:45,534 | INFO     | time since job start (3904s) is within the limit (349056.0s)
[2026-01-10 09:29:55] 2026-01-10 14:28:45,929 | INFO     | monitor loop #277: job 0:6965384131 is in state 'finished'
[2026-01-10 09:29:55] 2026-01-10 14:28:45,930 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:29:55] 2026-01-10 14:28:47,548 | INFO     | time since job start (3906s) is within the limit (349056.0s)
[2026-01-10 09:29:55] 2026-01-10 14:28:48,434 | INFO     | monitor loop #278: job 0:6965384131 is in state 'finished'
[2026-01-10 09:29:55] 2026-01-10 14:28:48,435 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:29:55] 2026-01-10 14:28:49,556 | INFO     | time since job start (3908s) is within the limit (349056.0s)
[2026-01-10 09:29:55] 2026-01-10 14:28:50,967 | INFO     | monitor loop #279: job 0:6965384131 is in state 'finished'
[2026-01-10 09:29:55] 2026-01-10 14:28:50,968 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:29:55] 2026-01-10 14:28:51,563 | INFO     | time since job start (3910s) is within the limit (349056.0s)
[2026-01-10 09:29:55] 2026-01-10 14:28:53,477 | INFO     | monitor loop #280: job 0:6965384131 is in state 'finished'
[2026-01-10 09:29:55] 2026-01-10 14:28:53,478 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:29:55] 2026-01-10 14:28:53,570 | INFO     | time since job start (3912s) is within the limit (349056.0s)
[2026-01-10 09:29:55] 2026-01-10 14:28:55,589 | INFO     | time since job start (3914s) is within the limit (349056.0s)
[2026-01-10 09:29:55] 2026-01-10 14:28:55,982 | INFO     | monitor loop #281: job 0:6965384131 is in state 'finished'
[2026-01-10 09:29:55] 2026-01-10 14:28:55,987 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:29:55] 2026-01-10 14:28:57,600 | INFO     | time since job start (3916s) is within the limit (349056.0s)
[2026-01-10 09:29:55] 2026-01-10 14:28:58,502 | INFO     | monitor loop #282: job 0:6965384131 is in state 'finished'
[2026-01-10 09:29:55] 2026-01-10 14:28:58,502 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:29:55] 2026-01-10 14:28:59,607 | INFO     | time since job start (3918s) is within the limit (349056.0s)
[2026-01-10 09:29:55] 2026-01-10 14:29:01,010 | INFO     | monitor loop #283: job 0:6965384131 is in state 'finished'
[2026-01-10 09:29:55] 2026-01-10 14:29:01,012 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:29:55] 2026-01-10 14:29:01,250 | INFO     | PID=859468 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 09:29:55] 2026-01-10 14:29:01,250 | INFO     | .. there are 9 such processes running
[2026-01-10 09:29:55] 2026-01-10 14:29:02,250 | INFO     | time since job start (3921s) is within the limit (349056.0s)
[2026-01-10 09:29:55] 2026-01-10 14:29:03,525 | INFO     | monitor loop #284: job 0:6965384131 is in state 'finished'
[2026-01-10 09:29:55] 2026-01-10 14:29:03,526 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:29:55] 2026-01-10 14:29:04,257 | INFO     | time since job start (3923s) is within the limit (349056.0s)
[2026-01-10 09:29:55] 2026-01-10 14:29:06,041 | INFO     | monitor loop #285: job 0:6965384131 is in state 'finished'
[2026-01-10 09:29:55] 2026-01-10 14:29:06,048 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:29:55] 2026-01-10 14:29:06,268 | INFO     | time since job start (3925s) is within the limit (349056.0s)
[2026-01-10 09:29:55] 2026-01-10 14:29:08,016 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 09:29:55] 2026-01-10 14:29:08,025 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3029.4582678571433
[2026-01-10 09:29:55] 2026-01-10 14:29:08,047 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965384131/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:29:55] 2026-01-10 14:29:08,048 | INFO     | extracted standard info from prmon json
[2026-01-10 09:29:55] 2026-01-10 14:29:08,048 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:29:55] 2026-01-10 14:29:08,048 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:29:55] 2026-01-10 14:29:08,050 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:29:55] 2026-01-10 14:29:08,050 | INFO     | sum of square deviations: 57364180.98245609
[2026-01-10 09:29:55] 2026-01-10 14:29:08,050 | INFO     | sum of deviations: -7288230864.666666
[2026-01-10 09:29:55] 2026-01-10 14:29:08,050 | INFO     | mean x: 1768053458.9824562
[2026-01-10 09:29:55] 2026-01-10 14:29:08,050 | INFO     | mean y: 2788061.3333333335
[2026-01-10 09:29:55] 2026-01-10 14:29:08,050 | INFO     | intersect: 224637421894.55353
[2026-01-10 09:29:55] 2026-01-10 14:29:08,051 | INFO     | chi2: 1.4682412870296684
[2026-01-10 09:29:55] 2026-01-10 14:29:08,051 | INFO     | current memory leak: -127.05 B/s (using 57 data points, chi2=1.47)
[2026-01-10 09:29:55] 2026-01-10 14:29:08,051 | INFO     | could have reported an average CPU frequency of 3112 MHz (6 samples)
[2026-01-10 09:29:55] 2026-01-10 14:29:08,051 | INFO     | ..............................
[2026-01-10 09:29:55] 2026-01-10 14:29:08,051 | INFO     | . Timing measurements:
[2026-01-10 09:29:55] 2026-01-10 14:29:08,051 | INFO     | . get job = 0 s
[2026-01-10 09:29:55] 2026-01-10 14:29:08,051 | INFO     | . initial setup = 2 s
[2026-01-10 09:29:55] 2026-01-10 14:29:08,051 | INFO     | . payload setup = 4 s
[2026-01-10 09:29:55] 2026-01-10 14:29:08,051 | INFO     | . stage-in = 0 s
[2026-01-10 09:29:55] 2026-01-10 14:29:08,051 | INFO     | . payload execution = 3872 s
[2026-01-10 09:29:55] 2026-01-10 14:29:08,051 | INFO     | . stage-out = 1 s
[2026-01-10 09:29:55] 2026-01-10 14:29:08,052 | INFO     | . log creation = 0 s
[2026-01-10 09:29:55] 2026-01-10 14:29:08,052 | INFO     | ..............................
[2026-01-10 09:29:55] 2026-01-10 14:29:08,147 | INFO     | 
[2026-01-10 09:29:55] 2026-01-10 14:29:08,148 | INFO     | job summary report
[2026-01-10 09:29:55] 2026-01-10 14:29:08,148 | INFO     | --------------------------------------------------
[2026-01-10 09:29:55] 2026-01-10 14:29:08,148 | INFO     | PanDA job id: 6965384131
[2026-01-10 09:29:55] 2026-01-10 14:29:08,148 | INFO     | task id: 47962010
[2026-01-10 09:29:55] 2026-01-10 14:29:08,148 | INFO     | errors: (none)
[2026-01-10 09:29:55] 2026-01-10 14:29:08,148 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:29:55] 2026-01-10 14:29:08,148 | INFO     | pilot state: finished 
[2026-01-10 09:29:55] 2026-01-10 14:29:08,148 | INFO     | transexitcode: 0
[2026-01-10 09:29:55] 2026-01-10 14:29:08,148 | INFO     | exeerrorcode: 0
[2026-01-10 09:29:55] 2026-01-10 14:29:08,148 | INFO     | exeerrordiag: 
[2026-01-10 09:29:55] 2026-01-10 14:29:08,148 | INFO     | exitcode: 0
[2026-01-10 09:29:55] 2026-01-10 14:29:08,148 | INFO     | exitmsg: OK
[2026-01-10 09:29:55] 2026-01-10 14:29:08,148 | INFO     | cpuconsumptiontime: 14164 s
[2026-01-10 09:29:55] 2026-01-10 14:29:08,148 | INFO     | nevents: 50
[2026-01-10 09:29:55] 2026-01-10 14:29:08,148 | INFO     | neventsw: 0
[2026-01-10 09:29:55] 2026-01-10 14:29:08,149 | INFO     | pid: 877032
[2026-01-10 09:29:55] 2026-01-10 14:29:08,149 | INFO     | pgrp: 877032
[2026-01-10 09:29:55] 2026-01-10 14:29:08,149 | INFO     | corecount: 10
[2026-01-10 09:29:55] 2026-01-10 14:29:08,149 | INFO     | event service: False
[2026-01-10 09:29:55] 2026-01-10 14:29:08,149 | INFO     | sizes: {0: 2284398, 1: 2284597, 5: 2284859, 11: 2284915, 3880: 2311647, 3881: 2311646, 3883: 2320824, 3885: 2320880, 3912: 2321126}
[2026-01-10 09:29:55] 2026-01-10 14:29:08,149 | INFO     | --------------------------------------------------
[2026-01-10 09:29:55] 2026-01-10 14:29:08,149 | INFO     | 
[2026-01-10 09:29:55] 2026-01-10 14:29:08,149 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 09:29:55] 2026-01-10 14:29:08,254 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:29:55] 2026-01-10 14:29:08,254 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:29:55] 2026-01-10 14:29:08,254 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:29:55] 2026-01-10 14:29:08,254 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:29:55] 2026-01-10 14:29:08,254 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:29:55] 2026-01-10 14:29:08,254 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:29:55] 2026-01-10 14:29:08,254 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:29:55] 2026-01-10 14:29:08,254 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:29:55] 2026-01-10 14:29:08,254 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:29:55] 2026-01-10 14:29:08,255 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:29:55] 2026-01-10 14:29:08,255 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:29:55] 2026-01-10 14:29:08,255 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:29:55] 2026-01-10 14:29:08,255 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:29:55] 2026-01-10 14:29:08,255 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:29:55] 2026-01-10 14:29:08,255 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:29:55] 2026-01-10 14:29:08,255 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:29:55] 2026-01-10 14:29:08,255 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:29:55] 2026-01-10 14:29:08,255 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:29:55] 2026-01-10 14:29:08,255 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:29:55] 2026-01-10 14:29:08,255 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:29:55] 2026-01-10 14:29:08,255 | INFO     | job 6965384131 has completed (purged errors)
[2026-01-10 09:29:55] 2026-01-10 14:29:08,255 | INFO     | overall cleanup function is called
[2026-01-10 09:29:55] 2026-01-10 14:29:09,319 | INFO     | --- collectZombieJob: --- 10, [877032]
[2026-01-10 09:29:55] 2026-01-10 14:29:09,320 | INFO     | zombie collector waiting for pid 877032
[2026-01-10 09:29:55] 2026-01-10 14:29:09,320 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:29:55] 2026-01-10 14:29:09,320 | INFO     | collected zombie processes
[2026-01-10 09:29:55] 2026-01-10 14:29:09,320 | INFO     | will attempt to kill all subprocesses of pid=877032
[2026-01-10 09:29:55] 2026-01-10 14:29:09,877 | INFO     | process IDs to be killed: [877032] (in reverse order)
[2026-01-10 09:29:55] 2026-01-10 14:29:10,099 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:29:55] 2026-01-10 14:29:10,099 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:29:55] 2026-01-10 14:29:10,120 | INFO     | did not find any defunct processes belonging to 877032
[2026-01-10 09:29:55] 2026-01-10 14:29:10,142 | INFO     | did not find any defunct processes belonging to 877032
[2026-01-10 09:29:55] 2026-01-10 14:29:10,142 | INFO     | ready for new job
[2026-01-10 09:29:55] 2026-01-10 14:29:10,142 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:29:55] 2026-01-10 14:29:10,144 | INFO     | ***************************************
[2026-01-10 09:29:55] 2026-01-10 14:29:10,144 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:29:55] 2026-01-10 14:29:10,144 | INFO     | ***************************************
[2026-01-10 09:29:55] 2026-01-10 14:29:10,144 | INFO     | 
[2026-01-10 09:29:55] 2026-01-10 14:29:10,147 | INFO     | architecture information:
[2026-01-10 09:29:55] 2026-01-10 14:29:10,152 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:29:55] 2026-01-10 14:29:10,192 | INFO     | cat /etc/os-release:
[2026-01-10 09:29:55] NAME="CentOS Linux"
[2026-01-10 09:29:55] VERSION="7 (Core)"
[2026-01-10 09:29:55] ID="centos"
[2026-01-10 09:29:55] ID_LIKE="rhel fedora"
[2026-01-10 09:29:55] VERSION_ID="7"
[2026-01-10 09:29:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:29:55] ANSI_COLOR="0;31"
[2026-01-10 09:29:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:29:55] HOME_URL="https://www.centos.org/"
[2026-01-10 09:29:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:29:55] 
[2026-01-10 09:29:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:29:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:29:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:29:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:29:55] 
[2026-01-10 09:29:55] 2026-01-10 14:29:10,192 | INFO     | ***************************************
[2026-01-10 09:29:55] 2026-01-10 14:29:10,696 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 09:29:55] 2026-01-10 14:29:10,757 | INFO     | sufficient remaining disk space (74412195840 B)
[2026-01-10 09:29:55] 2026-01-10 14:29:10,757 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:29:55] 2026-01-10 14:29:10,758 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:29:55] 2026-01-10 14:29:10,758 | INFO     | update_server=False
[2026-01-10 09:29:55] 2026-01-10 14:29:10,758 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:29:55] 2026-01-10 14:29:10,758 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:29:55] 2026-01-10 14:29:10,758 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:29:55] 2026-01-10 14:29:11,021 | INFO     | all data control threads have been joined
[2026-01-10 09:29:55] 2026-01-10 14:29:11,073 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 09:29:55] 2026-01-10 14:29:11,074 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 09:29:55] 2026-01-10 14:29:11,074 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:29:55] 2026-01-10 14:29:11,074 | INFO     | will abort loop
[2026-01-10 09:29:55] 2026-01-10 14:29:11,390 | INFO     | all payload control threads have been joined
[2026-01-10 09:29:55] 2026-01-10 14:29:11,572 | INFO     | all job control threads have been joined
[2026-01-10 09:29:55] 2026-01-10 14:29:11,764 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:29:55] 2026-01-10 14:29:12,027 | INFO     | [data] control thread has finished
[2026-01-10 09:29:55] 2026-01-10 14:29:12,085 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:29:55] 2026-01-10 14:29:12,086 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:29:55] 2026-01-10 14:29:12,234 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:29:55] 2026-01-10 14:29:12,245 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:29:55] 2026-01-10 14:29:12,396 | INFO     | [payload] control thread has finished
[2026-01-10 09:29:55] 2026-01-10 14:29:12,488 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:29:55] 2026-01-10 14:29:12,578 | INFO     | [job] control thread has finished
[2026-01-10 09:29:55] 2026-01-10 14:29:12,656 | INFO     | [job] validate thread has finished
[2026-01-10 09:29:55] 2026-01-10 14:29:12,756 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:29:55] 2026-01-10 14:29:12,765 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:29:55] 2026-01-10 14:29:12,983 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:29:55] 2026-01-10 14:29:13,173 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:29:55] 2026-01-10 14:29:14,180 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:29:55] 2026-01-10 14:29:14,767 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:29:55] 2026-01-10 14:29:20,918 | INFO     | job.realtimelogging is not enabled
[2026-01-10 09:29:55] 2026-01-10 14:29:21,924 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:29:55] 2026-01-10 14:29:39,966 | INFO     | PID=859468 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 09:29:55] 2026-01-10 14:29:39,966 | INFO     | .. there are 9 such processes running
[2026-01-10 09:29:55] 2026-01-10 14:29:39,966 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:29:55] 2026-01-10 14:29:39,967 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:29:55] 2026-01-10 14:29:39,967 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:29:55] 2026-01-10 14:29:48,035 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:29:55] 2026-01-10 14:29:48,690 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139957440108352)>', '<ExcThread(monitor, started 139957079373568)>']
[2026-01-10 09:29:55] 2026-01-10 14:29:49,034 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:29:55] 2026-01-10 14:29:49,035 | INFO     | [monitor] control thread has ended
[2026-01-10 09:29:55] 2026-01-10 14:29:53,716 | INFO     | all workflow threads have been joined
[2026-01-10 09:29:55] 2026-01-10 14:29:53,717 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:29:55] 2026-01-10 14:29:53,717 | INFO     | traces error code: 0
[2026-01-10 09:29:55] 2026-01-10 14:29:53,717 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:29:55] 2026-01-10 14:29:54,393 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:29:55] 2026-01-10 14:29:54,446 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:29:55] 2026-01-10 14:29:54,462 [wrapper] pilotpid: 859468
[2026-01-10 09:29:55] 2026-01-10 14:29:54,484 [wrapper] Pilot exit status: 0
[2026-01-10 09:29:55] 2026-01-10 14:29:54,613 [wrapper] pandaids: 6965384131
[2026-01-10 09:29:55] 2026-01-10 14:29:54,993 [wrapper] cleanup supervisor_pilot 1030351 859469
[2026-01-10 09:29:55] 2026-01-10 14:29:55,025 [wrapper] Test setup, not cleaning
[2026-01-10 09:29:55] 2026-01-10 14:29:55,074 [wrapper] apfmon messages muted
[2026-01-10 09:29:55] 2026-01-10 14:29:55,139 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:29:55] 2026-01-10 14:29:55,179 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:29:55]  *** Error codes and diagnostics ***
[2026-01-10 09:29:55]     "exeErrorCode": 0,
[2026-01-10 09:29:55]     "exeErrorDiag": "",
[2026-01-10 09:29:55]     "pilotErrorCode": 0,
[2026-01-10 09:29:55]     "pilotErrorDiag": "",
[2026-01-10 09:29:55]  *** Listing of results directory ***
[2026-01-10 09:29:55] total 433496
[2026-01-10 09:29:55] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:29:55] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:29:55] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:15 queuedata.json
[2026-01-10 09:29:55] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:29:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:23 run_atlas
[2026-01-10 09:29:55] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:23 job.xml
[2026-01-10 09:29:55] -rw-r--r--. 2 boincer umatlas 390344352 Jan 10 08:23 EVNT.47962006._000079.pool.root.1
[2026-01-10 09:29:55] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:23 start_atlas.sh
[2026-01-10 09:29:55] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:23 shared
[2026-01-10 09:29:55] -rw-r--r--. 2 boincer umatlas    592616 Jan 10 08:23 input.tar.gz
[2026-01-10 09:29:55] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:23 boinc_lockfile
[2026-01-10 09:29:55] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 08:23 pandaJob.out
[2026-01-10 09:29:55] -rw-------. 1 boincer umatlas        57 Jan 10 08:23 setup.sh.local
[2026-01-10 09:29:55] -rw-------. 1 boincer umatlas    989556 Jan 10 08:23 agis_schedconf.cvmfs.json
[2026-01-10 09:29:55] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:23 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:29:55] drwx------. 5 boincer umatlas      4096 Jan 10 08:23 pilot3
[2026-01-10 09:29:55] -rw-r--r--. 1 boincer umatlas      6841 Jan 10 09:18 init_data.xml
[2026-01-10 09:29:55] -rw-r--r--. 1 boincer umatlas       530 Jan 10 09:19 boinc_task_state.xml
[2026-01-10 09:29:55] -rw-------. 1 boincer umatlas  45646888 Jan 10 09:28 HITS.47962010._002272.pool.root.1
[2026-01-10 09:29:55] -rw-------. 1 boincer umatlas      1045 Jan 10 09:28 memory_monitor_summary.json
[2026-01-10 09:29:55] -rw-------. 1 boincer umatlas   1404697 Jan 10 09:28 log.47962010._002272.job.log.tgz.1
[2026-01-10 09:29:55] -rw-------. 1 boincer umatlas        95 Jan 10 09:28 pilot_heartbeat.json
[2026-01-10 09:29:55] -rw-------. 1 boincer umatlas      8574 Jan 10 09:29 heartbeat.json
[2026-01-10 09:29:55] -rw-r--r--. 1 boincer umatlas        27 Jan 10 09:29 wrapper_checkpoint.txt
[2026-01-10 09:29:55] -rw-------. 1 boincer umatlas      5080 Jan 10 09:29 pilotlog.txt
[2026-01-10 09:29:55] -rw-------. 1 boincer umatlas    589133 Jan 10 09:29 log.47962010._002272.job.log.1
[2026-01-10 09:29:55] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:29 boinc_mmap_file
[2026-01-10 09:29:55] -rw-------. 1 boincer umatlas       353 Jan 10 09:29 output.list
[2026-01-10 09:29:55] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:29 runtime_log
[2026-01-10 09:29:55] -rw-------. 1 boincer umatlas   2017280 Jan 10 09:29 result.tar.gz
[2026-01-10 09:29:55] -rw-r--r--. 1 boincer umatlas      9344 Jan 10 09:29 runtime_log.err
[2026-01-10 09:29:55] -rw-------. 1 boincer umatlas       653 Jan 10 09:29 6kuKDmSyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDqmKDm1IJbQm.diag
[2026-01-10 09:29:55] -rw-r--r--. 1 boincer umatlas     22405 Jan 10 09:29 stderr.txt
[2026-01-10 09:29:55] HITS file was successfully produced:
[2026-01-10 09:29:55] -rw-------. 1 boincer umatlas 45646888 Jan 10 09:28 shared/HITS.pool.root.1
[2026-01-10 09:29:55]  *** Contents of shared directory: ***
[2026-01-10 09:29:55] total 428348
[2026-01-10 09:29:55] -rw-r--r--. 2 boincer umatlas 390344352 Jan 10 08:23 ATLAS.root_0
[2026-01-10 09:29:55] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:23 start_atlas.sh
[2026-01-10 09:29:55] -rw-r--r--. 2 boincer umatlas    592616 Jan 10 08:23 input.tar.gz
[2026-01-10 09:29:55] -rw-------. 1 boincer umatlas  45646888 Jan 10 09:28 HITS.pool.root.1
[2026-01-10 09:29:55] -rw-------. 1 boincer umatlas   2017280 Jan 10 09:29 result.tar.gz
09:29:56 (853769): run_atlas exited; CPU time 14151.198357
09:29:56 (853769): called boinc_finish(0)

</stderr_txt>
]]>

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