Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:46:24 (2682537): wrapper (7.7.26015): starting
08:46:24 (2682537): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:46:24] Arguments: --nthreads 8
[2026-01-10 08:46:24] Threads: 8
[2026-01-10 08:46:24] Checking for CVMFS
[2026-01-10 08:46:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:46:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:46:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:46:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:46:25] 2.13.3.0 11334 94928 156536 154981 0 170 24844786 32935937 11023 16776704 0 322051774 99.475 475279864 40406 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:46:25] CVMFS is ok
[2026-01-10 08:46:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:46:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:46:25] Further information can be found at the LHC@home message board.
[2026-01-10 08:46:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:46:25] Checking for apptainer binary...
[2026-01-10 08:46:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:46:25] Running /usr/bin/apptainer --version
[2026-01-10 08:46:25] apptainer version 1.4.5-2.el9
[2026-01-10 08:46:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:46:26] c6-4-5-2.aglt2.org
[2026-01-10 08:46:26] apptainer works
[2026-01-10 08:46:26] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:46:26] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:46:26] Starting ATLAS job with PandaID=6965384461
[2026-01-10 08:46:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:50:59]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:50:59]  storage_token=
[2026-01-10 09:50:59]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6965384461/log.47962010._002597.job.log.tgz.1
[2026-01-10 09:50:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/e5/3a/log.47962010._002597.job.log.tgz.1
[2026-01-10 09:50:59]  workdir=None
[2026-01-10 09:50:59] ]
[2026-01-10 09:50:59] 2026-01-10 14:49:56,472 | INFO     | transferring file log.47962010._002597.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6965384461/log.47962010._002597.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 09:50:59] 2026-01-10 14:49:56,472 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6965384461/log.47962010._002597.job.log.tgz.1 /tmp/boinchome/slots/2/log.47962010._002597.job
[2026-01-10 09:50:59] 2026-01-10 14:49:56,571 | INFO     | adding to output.list: log.47962010._002597.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/e5/3a/log.47962010._002597.job.log.tgz.
[2026-01-10 09:50:59] 2026-01-10 14:49:56,572 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 09:50:59] 2026-01-10 14:49:56,572 | INFO     | summary of transferred files:
[2026-01-10 09:50:59] 2026-01-10 14:49:56,572 | INFO     |  -- lfn=log.47962010._002597.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 09:50:59] 2026-01-10 14:49:56,572 | INFO     | stage-out finished correctly
[2026-01-10 09:50:59] 2026-01-10 14:49:57,691 | INFO     | time since job start (3791s) is within the limit (349056.0s)
[2026-01-10 09:50:59] 2026-01-10 14:49:58,967 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 09:50:59] 2026-01-10 14:49:59,202 | INFO     | job 6965384461 has state=finished
[2026-01-10 09:50:59] 2026-01-10 14:49:59,207 | INFO     | preparing for final server update for job 6965384461 in state='finished'
[2026-01-10 09:50:59] 2026-01-10 14:49:59,208 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:50:59] 2026-01-10 14:49:59,208 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:50:59] 2026-01-10 14:49:59,208 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:50:59] 2026-01-10 14:49:59,209 | INFO     | job 6965384461 has finished - writing final server update
[2026-01-10 09:50:59] 2026-01-10 14:49:59,209 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:50:59] 2026-01-10 14:49:59,224 | INFO     | executing command: lscpu
[2026-01-10 09:50:59] 2026-01-10 14:49:59,398 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:50:59] 2026-01-10 14:49:59,703 | INFO     | time since job start (3793s) is within the limit (349056.0s)
[2026-01-10 09:50:59] 2026-01-10 14:50:00,066 | WARNING  | process 2693587 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 09:50:59] 2026-01-10 14:50:00,066 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965384461/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:50:59] 2026-01-10 14:50:00,371 | INFO     | number of running child processes to parent process 2693587: 1
[2026-01-10 09:50:59] 2026-01-10 14:50:00,372 | INFO     | maximum number of monitored processes: 14
[2026-01-10 09:50:59] 2026-01-10 14:50:01,710 | INFO     | time since job start (3795s) is within the limit (349056.0s)
[2026-01-10 09:50:59] 2026-01-10 14:50:02,891 | INFO     | monitor loop #258: job 0:6965384461 is in state 'finished'
[2026-01-10 09:50:59] 2026-01-10 14:50:02,891 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:59] 2026-01-10 14:50:03,717 | INFO     | time since job start (3797s) is within the limit (349056.0s)
[2026-01-10 09:50:59] 2026-01-10 14:50:05,403 | INFO     | monitor loop #259: job 0:6965384461 is in state 'finished'
[2026-01-10 09:50:59] 2026-01-10 14:50:05,403 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:59] 2026-01-10 14:50:05,724 | INFO     | time since job start (3799s) is within the limit (349056.0s)
[2026-01-10 09:50:59] 2026-01-10 14:50:07,374 | INFO     | PID=2686411 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:50:59] 2026-01-10 14:50:07,374 | INFO     | .. there are 9 such processes running
[2026-01-10 09:50:59] 2026-01-10 14:50:07,908 | INFO     | monitor loop #260: job 0:6965384461 is in state 'finished'
[2026-01-10 09:50:59] 2026-01-10 14:50:07,909 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:59] 2026-01-10 14:50:08,376 | INFO     | time since job start (3802s) is within the limit (349056.0s)
[2026-01-10 09:50:59] 2026-01-10 14:50:09,616 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 09:50:59] 2026-01-10 14:50:09,643 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3063.3531562499993
[2026-01-10 09:50:59] 2026-01-10 14:50:09,653 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965384461/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:50:59] 2026-01-10 14:50:09,654 | INFO     | extracted standard info from prmon json
[2026-01-10 09:50:59] 2026-01-10 14:50:09,654 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:50:59] 2026-01-10 14:50:09,654 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:50:59] 2026-01-10 14:50:09,656 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:50:59] 2026-01-10 14:50:09,656 | INFO     | sum of square deviations: 51556524.98181816
[2026-01-10 09:50:59] 2026-01-10 14:50:09,657 | INFO     | sum of deviations: 1830983782.9636343
[2026-01-10 09:50:59] 2026-01-10 14:50:09,657 | INFO     | mean x: 1768054806.3818183
[2026-01-10 09:50:59] 2026-01-10 14:50:09,657 | INFO     | mean y: 2539343.7636363637
[2026-01-10 09:50:59] 2026-01-10 14:50:09,657 | INFO     | intersect: -62788342683.63583
[2026-01-10 09:50:59] 2026-01-10 14:50:09,657 | INFO     | chi2: 0.39061103793311985
[2026-01-10 09:50:59] 2026-01-10 14:50:09,657 | INFO     | current memory leak: 35.51 B/s (using 55 data points, chi2=0.39)
[2026-01-10 09:50:59] 2026-01-10 14:50:09,657 | INFO     | could have reported an average CPU frequency of 3079 MHz (6 samples)
[2026-01-10 09:50:59] 2026-01-10 14:50:09,658 | INFO     | ..............................
[2026-01-10 09:50:59] 2026-01-10 14:50:09,658 | INFO     | . Timing measurements:
[2026-01-10 09:50:59] 2026-01-10 14:50:09,658 | INFO     | . get job = 0 s
[2026-01-10 09:50:59] 2026-01-10 14:50:09,658 | INFO     | . initial setup = 3 s
[2026-01-10 09:50:59] 2026-01-10 14:50:09,658 | INFO     | . payload setup = 6 s
[2026-01-10 09:50:59] 2026-01-10 14:50:09,658 | INFO     | . stage-in = 0 s
[2026-01-10 09:50:59] 2026-01-10 14:50:09,658 | INFO     | . payload execution = 3745 s
[2026-01-10 09:50:59] 2026-01-10 14:50:09,658 | INFO     | . stage-out = 1 s
[2026-01-10 09:50:59] 2026-01-10 14:50:09,658 | INFO     | . log creation = 0 s
[2026-01-10 09:50:59] 2026-01-10 14:50:09,658 | INFO     | ..............................
[2026-01-10 09:50:59] 2026-01-10 14:50:09,772 | INFO     | 
[2026-01-10 09:50:59] 2026-01-10 14:50:09,772 | INFO     | job summary report
[2026-01-10 09:50:59] 2026-01-10 14:50:09,772 | INFO     | --------------------------------------------------
[2026-01-10 09:50:59] 2026-01-10 14:50:09,772 | INFO     | PanDA job id: 6965384461
[2026-01-10 09:50:59] 2026-01-10 14:50:09,772 | INFO     | task id: 47962010
[2026-01-10 09:50:59] 2026-01-10 14:50:09,773 | INFO     | errors: (none)
[2026-01-10 09:50:59] 2026-01-10 14:50:09,773 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:50:59] 2026-01-10 14:50:09,773 | INFO     | pilot state: finished 
[2026-01-10 09:50:59] 2026-01-10 14:50:09,773 | INFO     | transexitcode: 0
[2026-01-10 09:50:59] 2026-01-10 14:50:09,773 | INFO     | exeerrorcode: 0
[2026-01-10 09:50:59] 2026-01-10 14:50:09,773 | INFO     | exeerrordiag: 
[2026-01-10 09:50:59] 2026-01-10 14:50:09,773 | INFO     | exitcode: 0
[2026-01-10 09:50:59] 2026-01-10 14:50:09,773 | INFO     | exitmsg: OK
[2026-01-10 09:50:59] 2026-01-10 14:50:09,773 | INFO     | cpuconsumptiontime: 13825 s
[2026-01-10 09:50:59] 2026-01-10 14:50:09,773 | INFO     | nevents: 50
[2026-01-10 09:50:59] 2026-01-10 14:50:09,773 | INFO     | neventsw: 0
[2026-01-10 09:50:59] 2026-01-10 14:50:09,773 | INFO     | pid: 2693587
[2026-01-10 09:50:59] 2026-01-10 14:50:09,773 | INFO     | pgrp: 2693587
[2026-01-10 09:50:59] 2026-01-10 14:50:09,773 | INFO     | corecount: 8
[2026-01-10 09:50:59] 2026-01-10 14:50:09,773 | INFO     | event service: False
[2026-01-10 09:50:59] 2026-01-10 14:50:09,774 | INFO     | sizes: {0: 2284400, 1: 2284599, 11: 2284599, 12: 2284889, 22: 2284917, 3756: 2311470, 3757: 2311597, 3758: 2320647, 3761: 2320703, 3772: 2320949}
[2026-01-10 09:50:59] 2026-01-10 14:50:09,774 | INFO     | --------------------------------------------------
[2026-01-10 09:50:59] 2026-01-10 14:50:09,774 | INFO     | 
[2026-01-10 09:50:59] 2026-01-10 14:50:09,774 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 09:50:59] 2026-01-10 14:50:09,795 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:50:59] 2026-01-10 14:50:09,795 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:50:59] 2026-01-10 14:50:09,795 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:50:59] 2026-01-10 14:50:09,795 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:50:59] 2026-01-10 14:50:09,795 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:50:59] 2026-01-10 14:50:09,795 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:50:59] 2026-01-10 14:50:09,795 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:50:59] 2026-01-10 14:50:09,795 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:50:59] 2026-01-10 14:50:09,795 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:50:59] 2026-01-10 14:50:09,795 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:50:59] 2026-01-10 14:50:09,795 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:50:59] 2026-01-10 14:50:09,796 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:50:59] 2026-01-10 14:50:09,796 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:50:59] 2026-01-10 14:50:09,796 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:50:59] 2026-01-10 14:50:09,796 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:50:59] 2026-01-10 14:50:09,796 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:50:59] 2026-01-10 14:50:09,796 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:50:59] 2026-01-10 14:50:09,796 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:50:59] 2026-01-10 14:50:09,796 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:50:59] 2026-01-10 14:50:09,796 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:50:59] 2026-01-10 14:50:09,796 | INFO     | job 6965384461 has completed (purged errors)
[2026-01-10 09:50:59] 2026-01-10 14:50:09,796 | INFO     | overall cleanup function is called
[2026-01-10 09:50:59] 2026-01-10 14:50:10,810 | INFO     | --- collectZombieJob: --- 10, [2693587]
[2026-01-10 09:50:59] 2026-01-10 14:50:10,810 | INFO     | zombie collector waiting for pid 2693587
[2026-01-10 09:50:59] 2026-01-10 14:50:10,810 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:50:59] 2026-01-10 14:50:10,810 | INFO     | collected zombie processes
[2026-01-10 09:50:59] 2026-01-10 14:50:10,810 | INFO     | will attempt to kill all subprocesses of pid=2693587
[2026-01-10 09:50:59] 2026-01-10 14:50:11,128 | INFO     | process IDs to be killed: [2693587] (in reverse order)
[2026-01-10 09:50:59] 2026-01-10 14:50:11,237 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:50:59] 2026-01-10 14:50:11,237 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:50:59] 2026-01-10 14:50:11,255 | INFO     | did not find any defunct processes belonging to 2693587
[2026-01-10 09:50:59] 2026-01-10 14:50:11,263 | INFO     | did not find any defunct processes belonging to 2693587
[2026-01-10 09:50:59] 2026-01-10 14:50:11,263 | INFO     | ready for new job
[2026-01-10 09:50:59] 2026-01-10 14:50:11,263 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:50:59] 2026-01-10 14:50:11,265 | INFO     | ***************************************
[2026-01-10 09:50:59] 2026-01-10 14:50:11,265 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:50:59] 2026-01-10 14:50:11,265 | INFO     | ***************************************
[2026-01-10 09:50:59] 2026-01-10 14:50:11,265 | INFO     | 
[2026-01-10 09:50:59] 2026-01-10 14:50:11,268 | INFO     | architecture information:
[2026-01-10 09:50:59] 2026-01-10 14:50:11,269 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:50:59] 2026-01-10 14:50:11,289 | INFO     | cat /etc/os-release:
[2026-01-10 09:50:59] NAME="CentOS Linux"
[2026-01-10 09:50:59] VERSION="7 (Core)"
[2026-01-10 09:50:59] ID="centos"
[2026-01-10 09:50:59] ID_LIKE="rhel fedora"
[2026-01-10 09:50:59] VERSION_ID="7"
[2026-01-10 09:50:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:50:59] ANSI_COLOR="0;31"
[2026-01-10 09:50:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:50:59] HOME_URL="https://www.centos.org/"
[2026-01-10 09:50:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:50:59] 
[2026-01-10 09:50:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:50:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:50:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:50:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:50:59] 
[2026-01-10 09:50:59] 2026-01-10 14:50:11,289 | INFO     | ***************************************
[2026-01-10 09:50:59] 2026-01-10 14:50:11,793 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 09:50:59] 2026-01-10 14:50:11,828 | INFO     | sufficient remaining disk space (76323749888 B)
[2026-01-10 09:50:59] 2026-01-10 14:50:11,828 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:50:59] 2026-01-10 14:50:11,828 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:50:59] 2026-01-10 14:50:11,828 | INFO     | update_server=False
[2026-01-10 09:50:59] 2026-01-10 14:50:11,828 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:50:59] 2026-01-10 14:50:11,829 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:50:59] 2026-01-10 14:50:11,829 | INFO     | aborting loop
[2026-01-10 09:50:59] 2026-01-10 14:50:12,142 | INFO     | all data control threads have been joined
[2026-01-10 09:50:59] 2026-01-10 14:50:12,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:50:59] 2026-01-10 14:50:12,835 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:50:59] 2026-01-10 14:50:12,835 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:50:59] 2026-01-10 14:50:13,006 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:50:59] 2026-01-10 14:50:13,077 | INFO     | all payload control threads have been joined
[2026-01-10 09:50:59] 2026-01-10 14:50:13,153 | INFO     | [data] control thread has finished
[2026-01-10 09:50:59] 2026-01-10 14:50:13,247 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:50:59] 2026-01-10 14:50:13,277 | INFO     | all job control threads have been joined
[2026-01-10 09:50:59] 2026-01-10 14:50:13,282 | INFO     | [job] validate thread has finished
[2026-01-10 09:50:59] 2026-01-10 14:50:13,648 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:50:59] 2026-01-10 14:50:13,861 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:50:59] 2026-01-10 14:50:13,939 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:50:59] 2026-01-10 14:50:14,002 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:50:59] 2026-01-10 14:50:14,083 | INFO     | [payload] control thread has finished
[2026-01-10 09:50:59] 2026-01-10 14:50:14,231 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:50:59] 2026-01-10 14:50:14,283 | INFO     | [job] control thread has finished
[2026-01-10 09:50:59] 2026-01-10 14:50:14,292 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:50:59] 2026-01-10 14:50:14,391 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:50:59] 2026-01-10 14:50:14,785 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:50:59] 2026-01-10 14:50:15,791 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:50:59] 2026-01-10 14:50:18,240 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:50:59] 2026-01-10 14:50:41,796 | INFO     | PID=2686411 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:50:59] 2026-01-10 14:50:41,797 | INFO     | .. there are 9 such processes running
[2026-01-10 09:50:59] 2026-01-10 14:50:41,797 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:50:59] 2026-01-10 14:50:41,798 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:50:59] 2026-01-10 14:50:41,798 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:50:59] 2026-01-10 14:50:52,232 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:50:59] 2026-01-10 14:50:52,454 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139651563267904)>', '<ExcThread(monitor, started 139650928736000)>']
[2026-01-10 09:50:59] 2026-01-10 14:50:52,864 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:50:59] 2026-01-10 14:50:52,865 | INFO     | [monitor] control thread has ended
[2026-01-10 09:50:59] 2026-01-10 14:50:57,480 | INFO     | all workflow threads have been joined
[2026-01-10 09:50:59] 2026-01-10 14:50:57,480 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:50:59] 2026-01-10 14:50:57,480 | INFO     | traces error code: 0
[2026-01-10 09:50:59] 2026-01-10 14:50:57,480 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:50:59] 2026-01-10 14:50:57,731 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:50:59] 2026-01-10 14:50:57,774 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:50:59] 2026-01-10 14:50:57,812 [wrapper] pilotpid: 2686411
[2026-01-10 09:50:59] 2026-01-10 14:50:57,843 [wrapper] Pilot exit status: 0
[2026-01-10 09:50:59] 2026-01-10 14:50:58,006 [wrapper] pandaids: 6965384461
[2026-01-10 09:50:59] 2026-01-10 14:50:58,328 [wrapper] cleanup supervisor_pilot 2863729 2686412
[2026-01-10 09:50:59] 2026-01-10 14:50:58,367 [wrapper] Test setup, not cleaning
[2026-01-10 09:50:59] 2026-01-10 14:50:58,386 [wrapper] apfmon messages muted
[2026-01-10 09:50:59] 2026-01-10 14:50:58,428 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:50:59] 2026-01-10 14:50:58,472 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:50:59]  *** Error codes and diagnostics ***
[2026-01-10 09:50:59]     "exeErrorCode": 0,
[2026-01-10 09:50:59]     "exeErrorDiag": "",
[2026-01-10 09:50:59]     "pilotErrorCode": 0,
[2026-01-10 09:50:59]     "pilotErrorDiag": "",
[2026-01-10 09:50:59]  *** Listing of results directory ***
[2026-01-10 09:50:59] total 431140
[2026-01-10 09:50:59] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:50:59] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:50:59] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:15 queuedata.json
[2026-01-10 09:50:59] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:50:59] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:46 run_atlas
[2026-01-10 09:50:59] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:46 job.xml
[2026-01-10 09:50:59] -rw-r--r--. 2 boincer umatlas 392231449 Jan 10 08:46 EVNT.47962006._000115.pool.root.1
[2026-01-10 09:50:59] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:46 start_atlas.sh
[2026-01-10 09:50:59] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:46 shared
[2026-01-10 09:50:59] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 08:46 input.tar.gz
[2026-01-10 09:50:59] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:46 boinc_lockfile
[2026-01-10 09:50:59] -rw-r--r--. 1 boincer umatlas      2891 Jan 10 08:46 pandaJob.out
[2026-01-10 09:50:59] -rw-------. 1 boincer umatlas        57 Jan 10 08:46 setup.sh.local
[2026-01-10 09:50:59] -rw-------. 1 boincer umatlas    989556 Jan 10 08:46 agis_schedconf.cvmfs.json
[2026-01-10 09:50:59] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:46 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:50:59] drwx------. 5 boincer umatlas      4096 Jan 10 08:46 pilot3
[2026-01-10 09:50:59] -rw-r--r--. 1 boincer umatlas       529 Jan 10 09:42 boinc_task_state.xml
[2026-01-10 09:50:59] -rw-r--r--. 1 boincer umatlas      6875 Jan 10 09:47 init_data.xml
[2026-01-10 09:50:59] -rw-------. 1 boincer umatlas  41859783 Jan 10 09:49 HITS.47962010._002597.pool.root.1
[2026-01-10 09:50:59] -rw-------. 1 boincer umatlas        95 Jan 10 09:49 pilot_heartbeat.json
[2026-01-10 09:50:59] -rw-------. 1 boincer umatlas      1039 Jan 10 09:49 memory_monitor_summary.json
[2026-01-10 09:50:59] -rw-------. 1 boincer umatlas   1186966 Jan 10 09:49 log.47962010._002597.job.log.tgz.1
[2026-01-10 09:50:59] -rw-------. 1 boincer umatlas      8564 Jan 10 09:50 heartbeat.json
[2026-01-10 09:50:59] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:50 boinc_mmap_file
[2026-01-10 09:50:59] -rw-r--r--. 1 boincer umatlas        27 Jan 10 09:50 wrapper_checkpoint.txt
[2026-01-10 09:50:59] -rw-------. 1 boincer umatlas      4823 Jan 10 09:50 pilotlog.txt
[2026-01-10 09:50:59] -rw-------. 1 boincer umatlas    556653 Jan 10 09:50 log.47962010._002597.job.log.1
[2026-01-10 09:50:59] -rw-------. 1 boincer umatlas       353 Jan 10 09:50 output.list
[2026-01-10 09:50:59] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:50 runtime_log
[2026-01-10 09:50:59] -rw-------. 1 boincer umatlas   1761280 Jan 10 09:50 result.tar.gz
[2026-01-10 09:50:59] -rw-r--r--. 1 boincer umatlas      9342 Jan 10 09:50 runtime_log.err
[2026-01-10 09:50:59] -rw-------. 1 boincer umatlas       651 Jan 10 09:50 akOKDmcyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6qmKDmfqIs2n.diag
[2026-01-10 09:50:59] -rw-r--r--. 1 boincer umatlas     22450 Jan 10 09:50 stderr.txt
[2026-01-10 09:50:59] HITS file was successfully produced:
[2026-01-10 09:50:59] -rw-------. 1 boincer umatlas 41859783 Jan 10 09:49 shared/HITS.pool.root.1
[2026-01-10 09:50:59]  *** Contents of shared directory: ***
[2026-01-10 09:50:59] total 426236
[2026-01-10 09:50:59] -rw-r--r--. 2 boincer umatlas 392231449 Jan 10 08:46 ATLAS.root_0
[2026-01-10 09:50:59] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:46 start_atlas.sh
[2026-01-10 09:50:59] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 08:46 input.tar.gz
[2026-01-10 09:50:59] -rw-------. 1 boincer umatlas  41859783 Jan 10 09:49 HITS.pool.root.1
[2026-01-10 09:50:59] -rw-------. 1 boincer umatlas   1761280 Jan 10 09:50 result.tar.gz
09:51:21 (2682537): run_atlas exited; CPU time 13848.809178
09:51:21 (2682537): called boinc_finish(0)

</stderr_txt>
]]>

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